F252306

General Info

Members Datasets Scaffolds Average Seq Length
168 146 336 209

Family's Representative Sequence

Representative Sequence 3300005844|Ga0068862_100341251|Ga0068862_1003412513
Length 240
Sequence VDRCRLASTPGLRQWIEEIGIGVVITAMSKDLWRLGEQYAGAPIDPEDCDPDPIVEFGRWFQRAVDAKLPSVNAVTLATVDERGRPAARIVLLKDFDARGFVFFTNYQSRKAHDLAAHPFAALVAFWEPLHRQVRIEGAIEQVEPEASDAYFATRPRGSQISAIASPQSRPIASREVLAQLVAAAEHATGDAAPARPAHWGGYRLIPDMIELWQGQPSRLHDRVRYRREHGGWVRDRLAP

Samples

Sample ID Description Type Environment
1 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
2 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
3 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
4 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
5 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
6 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
41 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
42 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
43 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
69 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
74 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
75 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
76 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
77 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
78 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
83 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
84 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
85 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
86 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
87 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
88 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
89 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
90 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
91 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
92 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
93 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
94 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
95 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
96 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
97 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
98 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
99 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
100 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
101 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
102 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
103 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
104 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
105 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
106 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
107 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
108 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
109 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
110 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
111 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
112 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
113 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
114 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
115 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
116 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
117 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
118 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
119 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
120 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
121 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
122 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
123 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
124 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
125 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
126 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
127 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
128 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
129 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
130 2687453129 Halotalea alkalilenta IHB B 13600 Isolate Unclassified
131 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
132 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
133 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
134 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
135 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
136 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
137 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
138 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
139 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
140 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
141 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
142 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
143 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
144 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
145 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
146 8057160832 Larsenimonas rhizosphaerae GH2-1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.5
Metatranscriptomes 0.6
Isolates 11.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.45
Nodule 0.6
Rhizoplane 0.6
Rhizosphere 70.24
Stem 0
Stem Tuber 0
Unclassified 5.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068862_100341251 3300005844 Unclassified 1387
2 Ga0055538_1000117 3300003751 Bacteria 60939
3 Ga0055539_1000163 3300003752 Bacteria 60939
4 Ga0055533_1000166 3300003756 Bacteria 60939
5 Ga0055525_1000227 3300003759 Bacteria 60939
6 Ga0055541_1000109 3300003841 Bacteria 60939
7 Ga0070690_100005310 3300005330 Bacteria 7226
8 Ga0068869_100015620 3300005334 Bacteria 5100
9 Ga0068869_100214903 3300005334 Bacteria 1522
10 Ga0070682_100155880 3300005337 Bacteria 1572
11 Ga0070689_100548076 3300005340 Bacteria 996
12 Ga0070692_10214773 3300005345 Bacteria 1134
13 Ga0070688_100214560 3300005365 Bacteria 1353
14 Ga0070700_100184928 3300005441 Bacteria 1453
15 Ga0070681_10414811 3300005458 Unclassified 1258
16 Ga0070681_10598492 3300005458 Bacteria 1017
17 Ga0070685_10055823 3300005466 Unclassified 2295
18 Ga0070698_100000728 3300005471 Bacteria 35348
19 Ga0070698_100666076 3300005471 Bacteria 982
20 Ga0070679_100043242 3300005530 Bacteria 4487
21 Ga0070684_100510965 3300005535 Bacteria 1113
22 Ga0070697_100755690 3300005536 Bacteria 859
23 Ga0070704_100157483 3300005549 Bacteria 1793
24 Ga0068855_100066287 3300005563 Bacteria 4210
25 Ga0068854_100007911 3300005578 Bacteria 6804
26 Ga0068856_100054019 3300005614 Bacteria 3961
27 Ga0070702_100156203 3300005615 Bacteria 1469
28 Ga0068864_100531276 3300005618 Bacteria 1135
29 Ga0068861_100603483 3300005719 Bacteria 1008
30 Ga0068860_100114801 3300005843 Bacteria 2575
31 Ga0068860_100130438 3300005843 Bacteria 2412
32 Ga0070717_10007733 3300006028 Bacteria 7998
33 Ga0070717_10341349 3300006028 Bacteria 1337
34 Ga0075428_101084115 3300006844 Bacteria 846
35 Ga0075429_100024738 3300006880 Bacteria 5210
36 Ga0075435_100201596 3300007076 Bacteria 1686
37 Ga0105244_10221715 3300009036 Bacteria 887
38 Ga0105240_10076139 3300009093 Bacteria 4137
39 Ga0105245_10908820 3300009098 Bacteria 922
40 Ga0105237_10006971 3300009545 Bacteria 12457
41 Ga0105238_10000505 3300009551 Bacteria 41099
42 Ga0105249_10283359 3300009553 Bacteria 1656
43 Ga0105239_10003532 3300010375 Bacteria 19140
44 Ga0157374_11161986 3300013296 Bacteria 793
45 Ga0157376_10077025 3300014969 Bacteria 2851
46 Ga0157376_10194120 3300014969 Bacteria 1864
47 Ga0182006_1011302 3300015261 Bacteria 3933
48 Ga0213872_10006497 3300021361 Bacteria 5858
49 Ga0224712_10084179 3300022467 Bacteria 1319
50 Ga0209784_100153 3300025224 Bacteria 62664
51 Ga0209566_100195 3300025225 Bacteria 62664
52 Ga0209674_100198 3300025226 Bacteria 62664
53 Ga0209563_100157 3300025230 Bacteria 62664
54 Ga0209677_100156 3300025253 Bacteria 62664
55 Ga0207684_10079475 3300025910 Unclassified 2790
56 Ga0207707_10379512 3300025912 Unclassified 1215
57 Ga0207695_10006732 3300025913 Bacteria 14831
58 Ga0207671_10007433 3300025914 Bacteria 9507
59 Ga0207660_10449185 3300025917 Bacteria 1042
60 Ga0207662_10404441 3300025918 Bacteria 926
61 Ga0207694_10000392 3300025924 Bacteria 40819
62 Ga0207670_10142098 3300025936 Bacteria 1771
63 Ga0207689_10014960 3300025942 Bacteria 6584
64 Ga0207689_10119999 3300025942 Bacteria 2163
65 Ga0207689_10157457 3300025942 Bacteria 1872
66 Ga0207667_10000019 3300025949 Bacteria 386233
67 Ga0207667_10012811 3300025949 Bacteria 9635
68 Ga0207712_10154559 3300025961 Bacteria 1776
69 Ga0207640_10002070 3300025981 Bacteria 10810
70 Ga0207708_10100841 3300026075 Bacteria 2234
71 Ga0207641_10054880 3300026088 Bacteria 3383
72 Ga0207648_10245381 3300026089 Bacteria 1596
73 Ga0207676_10451144 3300026095 Bacteria 1212
74 Ga0207674_10353812 3300026116 Bacteria 1420
75 Ga0207675_100153916 3300026118 Bacteria 2190
76 Ga0207675_100262512 3300026118 Bacteria 1674
77 Ga0268264_10679166 3300028381 Bacteria 1021
78 Ga0307517_10065759 3300028786 Bacteria 3349
79 Ga0307515_10065337 3300028794 Bacteria 5066
80 Ga0265338_10045425 3300028800 Bacteria 4039
81 Ga0307509_10001290 3300031507 Bacteria 42541
82 Ga0307509_10001580 3300031507 Bacteria 38322
83 Ga0307508_10040673 3300031616 Bacteria 4173
84 Ga0307508_10213079 3300031616 Bacteria 1532
85 Ga0307415_100267683 3300032126 Bacteria 1398
86 Ga0373949_0000093 3300035090 Bacteria 33464
87 Ga0373936_0000111 3300035113 Bacteria 28413
88 Ga0373941_0064204 3300035115 Bacteria 1202
89 Ga0373961_0000162 3300035241 Bacteria 32509
90 Ga0395900_0387808 3300037418 Bacteria 1364
91 Ga0395905_0018923 3300037471 Bacteria 6531
92 Ga0395905_0117719 3300037471 Bacteria 2497
93 Ga0395905_0136630 3300037471 Bacteria 2307
94 Ga0395901_0180196 3300038443 Bacteria 2216
95 Ga0436365_0039949 3300039437 Bacteria 3608
96 Ga0436361_0065289 3300039447 Bacteria 15724
97 Ga0451577_0480932 3300042876 Bacteria 1127
98 Ga0451577_0834925 3300042876 Unclassified 831
99 Ga0453684_0002274 3300044712 Bacteria 47417
100 Ga0453684_0163437 3300044712 Bacteria 2630
101 Ga0453684_0400622 3300044712 Bacteria 1537
102 Ga0451576_0511302 3300045051 Bacteria 1262
103 Ga0495605_0072296 3300046474 Bacteria 1627
104 Ga0495643_0005113 3300046522 Bacteria 8971
105 Ga0495642_0002923 3300046528 Bacteria 6804
106 Ga0495622_0016186 3300046557 Bacteria 3472
107 Ga0495668_0031229 3300046616 Bacteria 3003
108 Ga0495661_0008809 3300046665 Bacteria 6960
109 Ga0495649_0250001 3300046694 Bacteria 911
110 Ga0495686_0018205 3300047472 Bacteria 4719
111 Ga0496108_0000047 3300048911 Bacteria 133604
112 Ga0496116_0091710 3300048919 Bacteria 1845
113 Ga0501067_0002404 3300049583 Bacteria 10345
114 Ga0501068_0090556 3300049584 Bacteria 1887
115 Ga0501074_0538245 3300049590 Bacteria 827
116 Ga0501227_012506 3300049665 Bacteria 1859
117 Ga0501230_038891 3300049667 Unclassified 915
118 Ga0501233_006306 3300049668 Unclassified 2225
119 Ga0501236_045508 3300049670 Unclassified 739
120 Ga0501229_022929 3300049706 Unclassified 833
121 nmdc:mga09592_16580_c1 3300050508 Bacteria 6029
122 nmdc:mga0rr50_161740_c1 3300050513 Bacteria 1817
123 nmdc:mga0rr50_564093_c1 3300050513 Bacteria 970
124 nmdc:mga0a205_2026_c1 3300050515 Bacteria 17699
125 Ga0495619_0408112 3300053085 Bacteria 938
126 Ga0500578_0032987 3300053086 Bacteria 3329
127 Ga0500646_0015727 3300053090 Bacteria 1972
128 Ga0500647_0066181 3300053091 Bacteria 1738
129 Ga0500583_0020568 3300053092 Bacteria 2728
130 Ga0500566_0012015 3300053094 Bacteria 5099
131 Ga0500566_0153328 3300053094 Bacteria 1209
132 Ga0500640_001341 3300053095 Bacteria 7360
133 Ga0500554_000597 3300053102 Bacteria 7347
134 Ga0500554_066640 3300053102 Bacteria 1165
135 Ga0500554_085742 3300053102 Bacteria 1042
136 Ga0500572_005221 3300053111 Bacteria 2939
137 Ga0500595_000116 3300053119 Bacteria 53428
138 Ga0500597_011241 3300053120 Bacteria 3231
139 Ga0500614_001473 3300053123 Bacteria 5618
140 Ga0500614_006546 3300053123 Bacteria 2448
141 Ga0500618_000954 3300053125 Bacteria 14768
142 Ga0500642_0015050 3300053130 Bacteria 2896
143 Ga0500559_0008522 3300053136 Bacteria 4488
144 Ga0500585_019572 3300053144 Bacteria 2192
145 Ga0500603_014382 3300053150 Bacteria 1848
146 Ga0500636_0010876 3300053177 Bacteria 5319
147 Ga0501082_0291116 3300060353 Bacteria 1422
148 Ga0530510_0032508 3300061734 Bacteria 3754
149 2511387192 2511231026 Bacteria 5225445
150 2521556701 2521172590 Bacteria 5047645
151 2553006706 2551306416 Bacteria 6152985
152 2687579135 2687453129 Bacteria 4387428
153 2765567883 2765235838 Bacteria 5445269
154 2808982750 2808606386 Bacteria 4471946
155 2809130251 2808606415 Bacteria 4576710
156 2809150272 2808606419 Bacteria 4576925
157 2819618067 2818991449 Bacteria 5518009
158 2839097830 2839094727 Bacteria 5534556
159 2852621505 2852618963 Bacteria 4577824
160 2904441915 2904439833 Bacteria 5931679
161 2904533213 2904530477 Bacteria 5876334
162 2904586160 2904584206 Bacteria 6028872
163 2904592026 2904589729 Bacteria 6113573
164 2904601812 2904601388 Bacteria 5884906
165 2919083861 2919079590 Bacteria 5946433
166 2923515294 2923510766 Bacteria 5926163
167 2928132252 2928130867 Bacteria 5467269
168 8057161599 8057160832 Bacteria 3268302
169 Ga0068862_100341251
170 Ga0055538_1000117
171 Ga0055539_1000163
172 Ga0055533_1000166
173 Ga0055525_1000227
174 Ga0055541_1000109
175 Ga0070690_100005310
176 Ga0068869_100015620
177 Ga0068869_100214903
178 Ga0070682_100155880
179 Ga0070689_100548076
180 Ga0070692_10214773
181 Ga0070688_100214560
182 Ga0070700_100184928
183 Ga0070681_10414811
184 Ga0070681_10598492
185 Ga0070685_10055823
186 Ga0070698_100000728
187 Ga0070698_100666076
188 Ga0070679_100043242
189 Ga0070684_100510965
190 Ga0070697_100755690
191 Ga0070704_100157483
192 Ga0068855_100066287
193 Ga0068854_100007911
194 Ga0068856_100054019
195 Ga0070702_100156203
196 Ga0068864_100531276
197 Ga0068861_100603483
198 Ga0068860_100114801
199 Ga0068860_100130438
200 Ga0070717_10007733
201 Ga0070717_10341349
202 Ga0075428_101084115
203 Ga0075429_100024738
204 Ga0075435_100201596
205 Ga0105244_10221715
206 Ga0105240_10076139
207 Ga0105245_10908820
208 Ga0105237_10006971
209 Ga0105238_10000505
210 Ga0105249_10283359
211 Ga0105239_10003532
212 Ga0157374_11161986
213 Ga0157376_10077025
214 Ga0157376_10194120
215 Ga0182006_1011302
216 Ga0213872_10006497
217 Ga0224712_10084179
218 Ga0209784_100153
219 Ga0209566_100195
220 Ga0209674_100198
221 Ga0209563_100157
222 Ga0209677_100156
223 Ga0207684_10079475
224 Ga0207707_10379512
225 Ga0207695_10006732
226 Ga0207671_10007433
227 Ga0207660_10449185
228 Ga0207662_10404441
229 Ga0207694_10000392
230 Ga0207670_10142098
231 Ga0207689_10014960
232 Ga0207689_10119999
233 Ga0207689_10157457
234 Ga0207667_10000019
235 Ga0207667_10012811
236 Ga0207712_10154559
237 Ga0207640_10002070
238 Ga0207708_10100841
239 Ga0207641_10054880
240 Ga0207648_10245381
241 Ga0207676_10451144
242 Ga0207674_10353812
243 Ga0207675_100153916
244 Ga0207675_100262512
245 Ga0268264_10679166
246 Ga0307517_10065759
247 Ga0307515_10065337
248 Ga0265338_10045425
249 Ga0307509_10001290
250 Ga0307509_10001580
251 Ga0307508_10040673
252 Ga0307508_10213079
253 Ga0307415_100267683
254 Ga0373949_0000093
255 Ga0373936_0000111
256 Ga0373941_0064204
257 Ga0373961_0000162
258 Ga0395900_0387808
259 Ga0395905_0018923
260 Ga0395905_0117719
261 Ga0395905_0136630
262 Ga0395901_0180196
263 Ga0436365_0039949
264 Ga0436361_0065289
265 Ga0451577_0480932
266 Ga0451577_0834925
267 Ga0453684_0002274
268 Ga0453684_0163437
269 Ga0453684_0400622
270 Ga0451576_0511302
271 Ga0495605_0072296
272 Ga0495643_0005113
273 Ga0495642_0002923
274 Ga0495622_0016186
275 Ga0495668_0031229
276 Ga0495661_0008809
277 Ga0495649_0250001
278 Ga0495686_0018205
279 Ga0496108_0000047
280 Ga0496116_0091710
281 Ga0501067_0002404
282 Ga0501068_0090556
283 Ga0501074_0538245
284 Ga0501227_012506
285 Ga0501230_038891
286 Ga0501233_006306
287 Ga0501236_045508
288 Ga0501229_022929
289 nmdc:mga09592_16580_c1
290 nmdc:mga0rr50_161740_c1
291 nmdc:mga0rr50_564093_c1
292 nmdc:mga0a205_2026_c1
293 Ga0495619_0408112
294 Ga0500578_0032987
295 Ga0500646_0015727
296 Ga0500647_0066181
297 Ga0500583_0020568
298 Ga0500566_0012015
299 Ga0500566_0153328
300 Ga0500640_001341
301 Ga0500554_000597
302 Ga0500554_066640
303 Ga0500554_085742
304 Ga0500572_005221
305 Ga0500595_000116
306 Ga0500597_011241
307 Ga0500614_001473
308 Ga0500614_006546
309 Ga0500618_000954
310 Ga0500642_0015050
311 Ga0500559_0008522
312 Ga0500585_019572
313 Ga0500603_014382
314 Ga0500636_0010876
315 Ga0501082_0291116
316 Ga0530510_0032508
317 2511387192
318 2521556701
319 2553006706
320 2687579135
321 2765567883
322 2808982750
323 2809130251
324 2809150272
325 2819618067
326 2839097830
327 2852621505
328 2904441915
329 2904533213
330 2904586160
331 2904592026
332 2904601812
333 2919083861
334 2923515294
335 2928132252
336 8057161599

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10590

PNP_phzG_C

Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region

200

240

0.97

PF01243

Putative_PNPOx

Pyridoxamine 5'-phosphate oxidase

61

147

0.93

PF12766

Pyridox_oxase_2

Pyridoxamine 5'-phosphate oxidase

55

144

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ci0-assembly1.cif.gz_B pnp oxidase from saccharomyces cerevisiae 0.9621 14 211
1jnw-assembly1.cif.gz_A-2 active site structure of e. coli pyridoxine 5'-phosphate oxidase 0.9594 1 211
6ylz-assembly1.cif.gz_AAA-2 x-ray structure of the k72i,y129f,r133l, h199a quadruple mutant of pnp-oxidase from e. coli 0.9563 13 211
1jnw-assembly1.cif.gz_A-2 active site structure of e. coli pyridoxine 5'-phosphate oxidase 0.955 1 211
1dnl-assembly1.cif.gz_A x-ray structure of escherichia coli pyridoxine 5'-phosphate oxidase complexed with fmn at 1.8 angstrom resolution 0.9539 13 211
ID Description Score Start End Superfamily
af_A0A1R3LXN8_584_738_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9699 9 160 2.30.110.10
af_Q9LTX3_323_519_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9671 9 202 2.30.110.10
af_Q9UTQ1_28_231_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9603 16 211 2.30.110.10
1g78A00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9585 13 211 2.30.110.10
af_Q9VHZ5_37_246_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9576 21 211 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A519I4P0-F1-model_v4 deleted 0.9926 40 211
AF-A0A4Y9SP62-F1-model_v4 Pyridoxine/pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) (Pyridoxal 5'-phosphate synthase) 0.9893 3 211 GO:0004733
GO:0008615
GO:0010181
AF-A0A3D5SHM6-F1-model_v4 Pyridoxamine 5'-phosphate oxidase 0.9875 21 110 GO:0004733
GO:0008615
GO:0010181
AF-A0A378ZB42-F1-model_v4 deleted 0.9872 1 211
AF-A0A1T0A7E7-F1-model_v4 Pyridoxine/pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) (Pyridoxal 5'-phosphate synthase) 0.987 1 211 GO:0004733
GO:0008615
GO:0010181

Map