F252255

General Info

Members Datasets Scaffolds Average Seq Length
168 110 336 316

Family's Representative Sequence

Representative Sequence 3300005578|Ga0068854_100181186|Ga0068854_1001811862
Length 313
Sequence LIDAPAIRTHELAKRYGSITALAGLTMTIPRGDVFGFLGPNGAGKTTAVKLLLGLTPPTSGDAEVLGAAIGDREALRRVGYLPELFRYQLWLTAREVLALHCELAGIDRAAWQREIEDALAIVGLSDRGSGRVGTFSKGMQQRLGLGVALLGAPELVVLDEPTSALDPLGRVDVRDLVLSLKARGVAVLLNSHLIGEVERVCDRVVILDKGRVAASGTLAELLGQREVRLRLDSVDGRGETRLRAAGALARSGDWFTVQLASDDDGVTVPELVRDLVGLGVRVHAVEPVRISLEERLLAVLRHEEPEPAEAIR

Samples

Sample ID Description Type Environment
1 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
59 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
60 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
61 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
62 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
63 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
64 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
65 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
66 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
67 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
68 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
69 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
70 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
71 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
72 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
73 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
74 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
75 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
76 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
77 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
78 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
79 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
80 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
83 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
84 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
85 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
86 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
90 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
91 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
92 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
93 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
96 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
97 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
98 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
99 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
100 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
101 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
102 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
103 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
104 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
105 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
106 2773857922 Frankia sp. CcI49 Isolate Nodule
107 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
108 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
109 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
110 8002775197 Frankia nepalensis CN7 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.64
Metatranscriptomes 0.6
Isolates 4.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 1.79
Rhizoplane 1.19
Rhizosphere 94.64
Stem 0
Stem Tuber 0
Unclassified 0.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068854_100181186 3300005578 Bacteria 1646
2 JGI25406J46586_10036603 3300003203 Bacteria 1779
3 Ga0065715_10001394 3300005293 Bacteria 6773
4 Ga0070683_100066795 3300005329 Bacteria 3349
5 Ga0070680_100306853 3300005336 Bacteria 1346
6 Ga0070680_100337007 3300005336 Bacteria 1281
7 Ga0070682_100205652 3300005337 Bacteria 1392
8 Ga0068868_100131203 3300005338 Bacteria 2050
9 Ga0070692_10009576 3300005345 Bacteria 4373
10 Ga0070692_10011276 3300005345 Bacteria 4098
11 Ga0070668_100000179 3300005347 Bacteria 40901
12 Ga0070669_100182793 3300005353 Bacteria 1641
13 Ga0070673_100301117 3300005364 Bacteria 1411
14 Ga0070703_10001172 3300005406 Bacteria 8075
15 Ga0070701_10046447 3300005438 Bacteria 2232
16 Ga0070705_100031992 3300005440 Bacteria 2918
17 Ga0070700_100000094 3300005441 Bacteria 60178
18 Ga0070694_100027327 3300005444 Bacteria 3704
19 Ga0070694_100043628 3300005444 Bacteria 2999
20 Ga0070681_10049103 3300005458 Bacteria 4215
21 Ga0070706_100003553 3300005467 Bacteria 15334
22 Ga0070706_100010116 3300005467 Bacteria 8767
23 Ga0070707_100135391 3300005468 Bacteria 2397
24 Ga0070707_100137497 3300005468 Bacteria 2377
25 Ga0070698_100201187 3300005471 Bacteria 1928
26 Ga0070699_100206102 3300005518 Bacteria 1749
27 Ga0070679_100079034 3300005530 Bacteria 3278
28 Ga0070679_100233707 3300005530 Bacteria 1797
29 Ga0070697_100004472 3300005536 Bacteria 10752
30 Ga0070697_100082289 3300005536 Bacteria 2653
31 Ga0070695_100057553 3300005545 Bacteria 2512
32 Ga0070695_100085253 3300005545 Bacteria 2097
33 Ga0070704_100036227 3300005549 Bacteria 3360
34 Ga0070704_100106546 3300005549 Bacteria 2124
35 Ga0070664_100029748 3300005564 Bacteria 4555
36 Ga0068857_100012104 3300005577 Bacteria 7502
37 Ga0081538_10000748 3300005981 Bacteria 35447
38 Ga0081538_10084658 3300005981 Bacteria 1669
39 Ga0081539_10000173 3300005985 Bacteria 151356
40 Ga0081539_10000780 3300005985 Bacteria 62088
41 Ga0081539_10003466 3300005985 Bacteria 19310
42 Ga0081539_10011681 3300005985 Bacteria 6902
43 Ga0081539_10013678 3300005985 Bacteria 6095
44 Ga0081539_10025566 3300005985 Bacteria 3798
45 Ga0075428_100001953 3300006844 Bacteria 22164
46 Ga0075428_100038541 3300006844 Bacteria 5260
47 Ga0075431_100014837 3300006847 Bacteria 7889
48 Ga0075433_10220069 3300006852 Bacteria 1686
49 Ga0075429_100007235 3300006880 Bacteria 9629
50 Ga0075436_100027400 3300006914 Bacteria 3921
51 Ga0075435_100370453 3300007076 Bacteria 1229
52 Ga0111539_10142154 3300009094 Bacteria 2809
53 Ga0111539_10763563 3300009094 Bacteria 1125
54 Ga0114129_10002899 3300009147 Bacteria 24001
55 Ga0114129_10010471 3300009147 Bacteria 13227
56 Ga0114129_10104473 3300009147 Bacteria 3915
57 Ga0114129_10191281 3300009147 Bacteria 2778
58 Ga0105238_10127602 3300009551 Bacteria 2522
59 Ga0157369_10049795 3300013105 Bacteria 4539
60 Ga0157369_10107450 3300013105 Bacteria 2968
61 Ga0157372_10263169 3300013307 Bacteria 2003
62 Ga0157375_10755174 3300013308 Bacteria 1124
63 Ga0163163_10114810 3300014325 Bacteria 2724
64 Ga0206353_10684051 3300020082 Bacteria 5661
65 Ga0207653_10000355 3300025885 Bacteria 22504
66 Ga0207684_10000152 3300025910 Bacteria 121082
67 Ga0207707_10336727 3300025912 Bacteria 1301
68 Ga0207707_10387060 3300025912 Bacteria 1201
69 Ga0207660_10123951 3300025917 Bacteria 1960
70 Ga0207662_10004000 3300025918 Bacteria 7682
71 Ga0207652_10031671 3300025921 Bacteria 4443
72 Ga0207652_10081994 3300025921 Bacteria 2822
73 Ga0207652_10354200 3300025921 Bacteria 1325
74 Ga0207646_10000085 3300025922 Bacteria 125486
75 Ga0207646_10088043 3300025922 Bacteria 2778
76 Ga0207661_10077109 3300025944 Bacteria 2740
77 Ga0207679_10043712 3300025945 Bacteria 3228
78 Ga0207651_10226133 3300025960 Bacteria 1516
79 Ga0207668_10000973 3300025972 Bacteria 17219
80 Ga0207708_10000123 3300026075 Bacteria 60071
81 Ga0207674_10004554 3300026116 Bacteria 16652
82 Ga0207683_10033667 3300026121 Bacteria 4452
83 Ga0207428_10168207 3300027907 Bacteria 1661
84 Ga0307513_10025116 3300031456 Bacteria 6914
85 Ga0307408_100159368 3300031548 Bacteria 1791
86 Ga0307405_10248801 3300031731 Bacteria 1321
87 Ga0307405_10303690 3300031731 Bacteria 1212
88 Ga0307413_10033020 3300031824 Bacteria 2941
89 Ga0307406_10018845 3300031901 Bacteria 4041
90 Ga0307406_10036535 3300031901 Bacteria 3028
91 Ga0307407_10011765 3300031903 Bacteria 4182
92 Ga0307407_10012574 3300031903 Bacteria 4074
93 Ga0307407_10017286 3300031903 Bacteria 3614
94 Ga0307409_100019080 3300031995 Bacteria 4632
95 Ga0307409_100049725 3300031995 Bacteria 3198
96 Ga0307409_100172291 3300031995 Bacteria 1906
97 Ga0307416_100004899 3300032002 Bacteria 8148
98 Ga0307416_100087729 3300032002 Bacteria 2657
99 Ga0307416_100179342 3300032002 Bacteria 1983
100 Ga0307416_100192252 3300032002 Bacteria 1926
101 Ga0307416_100341999 3300032002 Bacteria 1509
102 Ga0307416_100424206 3300032002 Bacteria 1375
103 Ga0307416_100458608 3300032002 Bacteria 1329
104 Ga0307416_100479186 3300032002 Bacteria 1304
105 Ga0307416_100510015 3300032002 Bacteria 1269
106 Ga0307414_10105857 3300032004 Bacteria 2128
107 Ga0307414_10119997 3300032004 Bacteria 2020
108 Ga0307414_10146373 3300032004 Bacteria 1857
109 Ga0307411_10019020 3300032005 Bacteria 3957
110 Ga0307415_100040216 3300032126 Bacteria 3096
111 Ga0307415_100048405 3300032126 Bacteria 2868
112 Ga0307415_100128188 3300032126 Bacteria 1916
113 Ga0307415_100174404 3300032126 Bacteria 1680
114 Ga0307415_100182426 3300032126 Bacteria 1648
115 Ga0307415_100248960 3300032126 Bacteria 1442
116 Ga0307415_100287030 3300032126 Bacteria 1356
117 Ga0395900_0108076 3300037418 Bacteria 2858
118 Ga0436364_0751711 3300037853 Bacteria 4434
119 Ga0395901_0225781 3300038443 Bacteria 1956
120 Ga0395901_0332576 3300038443 Bacteria 1570
121 Ga0439459_0012484 3300042438 Bacteria 1514
122 Ga0451577_0655550 3300042876 Bacteria 952
123 Ga0466966_0185886 3300044684 Bacteria 1260
124 Ga0466961_0023884 3300044693 Bacteria 3934
125 Ga0466961_0120575 3300044693 Bacteria 1647
126 Ga0466963_0088806 3300044694 Bacteria 2102
127 Ga0466971_0103288 3300044719 Bacteria 1311
128 Ga0466957_0046008 3300044842 Bacteria 2648
129 Ga0466960_0137973 3300044901 Bacteria 1293
130 Ga0466967_0000780 3300045976 Bacteria 16565
131 Ga0466967_0061096 3300045976 Bacteria 3342
132 Ga0466967_0327525 3300045976 Bacteria 1479
133 Ga0495594_0137910 3300046499 Bacteria 1383
134 Ga0495658_0039589 3300046683 Unclassified 2616
135 Ga0496102_0140648 3300048905 Bacteria 2263
136 Ga0496108_0000017 3300048911 Bacteria 235428
137 Ga0501036_0144136 3300049572 Bacteria 2009
138 Ga0501041_0008466 3300049577 Bacteria 6052
139 Ga0501042_0227841 3300049578 Bacteria 1344
140 Ga0501069_0017272 3300049585 Bacteria 3882
141 Ga0501071_0089030 3300049587 Bacteria 2265
142 Ga0501072_0064930 3300049588 Bacteria 2878
143 Ga0501076_0217276 3300049592 Bacteria 1562
144 Ga0501077_0128738 3300049593 Bacteria 1605
145 Ga0501044_0000319 3300049823 Bacteria 60713
146 Ga0501045_0164801 3300049824 Bacteria 1651
147 nmdc:mga05p37_13750_c1 3300050507 Bacteria 9696
148 nmdc:mga05p37_275351_c1 3300050507 Bacteria 2010
149 nmdc:mga05p37_37316_c1 3300050507 Bacteria 5958
150 nmdc:mga05p37_4181_c1 3300050507 Bacteria 16868
151 nmdc:mga09592_3594_c1 3300050508 Bacteria 12511
152 nmdc:mga0qj67_144937_c1 3300050509 Bacteria 1925
153 nmdc:mga0qj67_171341_c1 3300050509 Bacteria 1763
154 nmdc:mga0qj67_174216_c1 3300050509 Bacteria 1747
155 nmdc:mga06r32_280449_c1 3300050510 Bacteria 1653
156 nmdc:mga06r32_87331_c1 3300050510 Bacteria 3043
157 nmdc:mga08y16_93797_c1 3300050511 Bacteria 3127
158 Ga0501084_0249223 3300054114 Bacteria 1499
159 Ga0501082_0009570 3300060353 Bacteria 8340
160 Ga0501082_0229448 3300060353 Bacteria 1616
161 2623499645 2622736605 Bacteria 4992138
162 2676479937 2675903059 Bacteria 8644972
163 2689993873 2687453743 Bacteria 8361025
164 2774853070 2773857922 Bacteria 9757215
165 2816423817 2816332119 Bacteria 8120218
166 2832004908 2832004796 Bacteria 6538017
167 2866068527 2866065130 Bacteria 6518152
168 8002782985 8002775197 Bacteria 10728764
169 Ga0068854_100181186
170 JGI25406J46586_10036603
171 Ga0065715_10001394
172 Ga0070683_100066795
173 Ga0070680_100306853
174 Ga0070680_100337007
175 Ga0070682_100205652
176 Ga0068868_100131203
177 Ga0070692_10009576
178 Ga0070692_10011276
179 Ga0070668_100000179
180 Ga0070669_100182793
181 Ga0070673_100301117
182 Ga0070703_10001172
183 Ga0070701_10046447
184 Ga0070705_100031992
185 Ga0070700_100000094
186 Ga0070694_100027327
187 Ga0070694_100043628
188 Ga0070681_10049103
189 Ga0070706_100003553
190 Ga0070706_100010116
191 Ga0070707_100135391
192 Ga0070707_100137497
193 Ga0070698_100201187
194 Ga0070699_100206102
195 Ga0070679_100079034
196 Ga0070679_100233707
197 Ga0070697_100004472
198 Ga0070697_100082289
199 Ga0070695_100057553
200 Ga0070695_100085253
201 Ga0070704_100036227
202 Ga0070704_100106546
203 Ga0070664_100029748
204 Ga0068857_100012104
205 Ga0081538_10000748
206 Ga0081538_10084658
207 Ga0081539_10000173
208 Ga0081539_10000780
209 Ga0081539_10003466
210 Ga0081539_10011681
211 Ga0081539_10013678
212 Ga0081539_10025566
213 Ga0075428_100001953
214 Ga0075428_100038541
215 Ga0075431_100014837
216 Ga0075433_10220069
217 Ga0075429_100007235
218 Ga0075436_100027400
219 Ga0075435_100370453
220 Ga0111539_10142154
221 Ga0111539_10763563
222 Ga0114129_10002899
223 Ga0114129_10010471
224 Ga0114129_10104473
225 Ga0114129_10191281
226 Ga0105238_10127602
227 Ga0157369_10049795
228 Ga0157369_10107450
229 Ga0157372_10263169
230 Ga0157375_10755174
231 Ga0163163_10114810
232 Ga0206353_10684051
233 Ga0207653_10000355
234 Ga0207684_10000152
235 Ga0207707_10336727
236 Ga0207707_10387060
237 Ga0207660_10123951
238 Ga0207662_10004000
239 Ga0207652_10031671
240 Ga0207652_10081994
241 Ga0207652_10354200
242 Ga0207646_10000085
243 Ga0207646_10088043
244 Ga0207661_10077109
245 Ga0207679_10043712
246 Ga0207651_10226133
247 Ga0207668_10000973
248 Ga0207708_10000123
249 Ga0207674_10004554
250 Ga0207683_10033667
251 Ga0207428_10168207
252 Ga0307513_10025116
253 Ga0307408_100159368
254 Ga0307405_10248801
255 Ga0307405_10303690
256 Ga0307413_10033020
257 Ga0307406_10018845
258 Ga0307406_10036535
259 Ga0307407_10011765
260 Ga0307407_10012574
261 Ga0307407_10017286
262 Ga0307409_100019080
263 Ga0307409_100049725
264 Ga0307409_100172291
265 Ga0307416_100004899
266 Ga0307416_100087729
267 Ga0307416_100179342
268 Ga0307416_100192252
269 Ga0307416_100341999
270 Ga0307416_100424206
271 Ga0307416_100458608
272 Ga0307416_100479186
273 Ga0307416_100510015
274 Ga0307414_10105857
275 Ga0307414_10119997
276 Ga0307414_10146373
277 Ga0307411_10019020
278 Ga0307415_100040216
279 Ga0307415_100048405
280 Ga0307415_100128188
281 Ga0307415_100174404
282 Ga0307415_100182426
283 Ga0307415_100248960
284 Ga0307415_100287030
285 Ga0395900_0108076
286 Ga0436364_0751711
287 Ga0395901_0225781
288 Ga0395901_0332576
289 Ga0439459_0012484
290 Ga0451577_0655550
291 Ga0466966_0185886
292 Ga0466961_0023884
293 Ga0466961_0120575
294 Ga0466963_0088806
295 Ga0466971_0103288
296 Ga0466957_0046008
297 Ga0466960_0137973
298 Ga0466967_0000780
299 Ga0466967_0061096
300 Ga0466967_0327525
301 Ga0495594_0137910
302 Ga0495658_0039589
303 Ga0496102_0140648
304 Ga0496108_0000017
305 Ga0501036_0144136
306 Ga0501041_0008466
307 Ga0501042_0227841
308 Ga0501069_0017272
309 Ga0501071_0089030
310 Ga0501072_0064930
311 Ga0501076_0217276
312 Ga0501077_0128738
313 Ga0501044_0000319
314 Ga0501045_0164801
315 nmdc:mga05p37_13750_c1
316 nmdc:mga05p37_275351_c1
317 nmdc:mga05p37_37316_c1
318 nmdc:mga05p37_4181_c1
319 nmdc:mga09592_3594_c1
320 nmdc:mga0qj67_144937_c1
321 nmdc:mga0qj67_171341_c1
322 nmdc:mga0qj67_174216_c1
323 nmdc:mga06r32_280449_c1
324 nmdc:mga06r32_87331_c1
325 nmdc:mga08y16_93797_c1
326 Ga0501084_0249223
327 Ga0501082_0009570
328 Ga0501082_0229448
329 2623499645
330 2676479937
331 2689993873
332 2774853070
333 2816423817
334 2832004908
335 2866068527
336 8002782985

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

22

164

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tif-assembly1.cif.gz_B dimeric structure of a post-hydrolysis state of the atp-binding cassette mj0796 bound to adp and pi 0.9305 21 232
5lil-assembly1.cif.gz_B structure of aggregatibacter actinomycetemcomitans macb bound to atpys (p21) 0.9218 18 232
4p33-assembly1.cif.gz_A crystal structure of e. coli lptb-e163q in complex with atp-sodium 0.9216 21 235
5lj7-assembly1.cif.gz_B structure of aggregatibacter actinomycetemcomitans macb bound to atp (p21) 0.9211 18 232
7ahd-assembly1.cif.gz_D opua (e190q) occluded 0.9199 20 235
ID Description Score Start End Superfamily
af_O33189_10_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9587 16 231 3.40.50.300
af_P36879_1_236_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9499 18 235 3.40.50.300
af_Q0E8Q7_1247_1483_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9491 19 234 3.40.50.300
af_Q2FVB4_1_230_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9478 18 230 3.40.50.300
af_Q2FXB7_1_229_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9468 18 233 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A495ZR69-F1-model_v4 ABC transporter domain-containing protein 0.9473 21 234 GO:0005524
GO:0016887
AF-X1DWV4-F1-model_v4 ABC transporter domain-containing protein 0.9456 19 179 GO:0005524
GO:0016887
AF-A0A7V4A9P9-F1-model_v4 ABC transporter ATP-binding protein 0.9447 15 205 GO:0005524
GO:0016887
AF-A0A0D1P4L1-F1-model_v4 deleted 0.942 15 234
AF-A0A7C7VTW9-F1-model_v4 ATP-binding cassette domain-containing protein 0.9389 17 227 GO:0005524
GO:0005886
GO:0016887
GO:0022857

Map