F251598

General Info

Members Datasets Scaffolds Average Seq Length
167 133 334 375

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2995463766|2995469115
Length 407
Sequence DQAVDAATPASAAPESAASASVTSVSATSYADAFAALYGRRPEGVWQAPGRVNLIGEHTDYNDGFVLPMALPSAARIAVARRDDDLVRVHSAQGDGGVTEFTIASLKPGSVPGWAAYPAGALWVLREEGHPLPGFDLHLDSDVPFGAGLSSSAALQCAVLLACDELLGLGIPRPTLARLAQRAENDYVGAPVGVMDQTASLCCTEGAALFLDTRDMAQRQVPLDLLAAGLRLLIVDTRVEHGHADGAYRNRREGCERSAALLGVRALRDVDADKLDEALAQLPDEELRRLTRHVVTENARVLRATELLTAGDFAALGRILTEGHASQRDDFAISCPQSDAAVELALAGGALGARQTGGGFGGCVIVLTEPDRIETIASTIKSHYAAQGWNAPACFTATPAAGARRLL

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
16 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
22 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
23 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
31 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
32 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
33 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
34 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
35 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
36 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
37 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
38 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
39 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
40 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
41 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
42 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
43 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
44 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
45 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
46 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
47 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
48 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
49 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
50 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
51 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
52 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
53 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
54 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
55 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
56 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
57 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
58 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
59 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
60 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
61 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
62 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
63 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
64 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
65 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
66 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
67 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
68 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
69 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
70 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
71 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
72 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
84 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
85 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
86 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
87 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
88 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
89 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
90 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
91 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
95 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
96 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
97 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
98 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
99 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
100 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
101 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
102 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
103 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
104 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
105 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
106 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
107 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
108 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
109 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
110 2643221714 Streptomyces sp. Root264 Isolate Unclassified
111 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
112 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
113 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
114 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
115 2808606448 Streptomyces sp. 193411 Isolate Unclassified
116 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
117 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
118 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
119 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
120 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
121 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
122 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
123 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
124 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
125 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
126 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
127 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
128 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
129 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
130 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
131 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
132 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
133 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 82.04
Metatranscriptomes 1.2
Isolates 16.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.59
Nodule 0
Rhizoplane 0.6
Rhizosphere 79.04
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10020416 3300003323 Bacteria 9071
2 Ga0006562J51391_1073696 3300003578 Bacteria 3156
3 Ga0006562J51391_1073697 3300003578 Bacteria 4060
4 Ga0065707_10098535 3300005295 Bacteria 3077
5 Ga0070683_100017848 3300005329 Bacteria 6273
6 Ga0070670_100049379 3300005331 Bacteria 3617
7 Ga0070692_10166445 3300005345 Bacteria 1267
8 Ga0070688_100202643 3300005365 Bacteria 1389
9 Ga0070678_100090244 3300005456 Bacteria 2348
10 Ga0070685_10042713 3300005466 Bacteria 2588
11 Ga0070706_100000497 3300005467 Bacteria 46169
12 Ga0070706_100040379 3300005467 Bacteria 4307
13 Ga0070672_100330037 3300005543 Bacteria 1298
14 Ga0068855_100259425 3300005563 Bacteria 1937
15 Ga0068856_100189150 3300005614 Bacteria 2072
16 Ga0081455_10013689 3300005937 Bacteria 7988
17 Ga0081455_10022115 3300005937 Bacteria 5951
18 Ga0081538_10048977 3300005981 Bacteria 2569
19 Ga0075364_10002419 3300006051 Bacteria 10458
20 Ga0075364_10010727 3300006051 Bacteria 5542
21 Ga0075367_10009861 3300006178 Bacteria 5003
22 Ga0075370_10003412 3300006353 Bacteria 7558
23 Ga0075430_100074532 3300006846 Bacteria 2846
24 Ga0075431_100007528 3300006847 Bacteria 10841
25 Ga0075431_100288483 3300006847 Bacteria 1661
26 Ga0105246_10001087 3300011119 Bacteria 15722
27 Ga0183367_1005 3300015688 Bacteria 652063
28 Ga0207697_10002895 3300025315 Bacteria 8688
29 Ga0207688_10018320 3300025901 Bacteria 3810
30 Ga0207684_10000483 3300025910 Bacteria 51535
31 Ga0207650_10148271 3300025925 Bacteria 1849
32 Ga0207661_10083824 3300025944 Bacteria 2639
33 Ga0207658_10335976 3300025986 Bacteria 1312
34 Ga0207683_10109274 3300026121 Bacteria 2475
35 Ga0307512_10071632 3300030522 Bacteria 2570
36 Ga0316182_1148228 3300030745 Bacteria 4126
37 Ga0307513_10049861 3300031456 Bacteria 4531
38 Ga0307514_10012856 3300031649 Bacteria 6956
39 Ga0307516_10006133 3300031730 Bacteria 14171
40 Ga0307406_10236556 3300031901 Bacteria 1367
41 Ga0307407_10094966 3300031903 Bacteria 1837
42 Ga0307407_10120087 3300031903 Bacteria 1665
43 Ga0307409_100306616 3300031995 Bacteria 1480
44 Ga0307415_100093854 3300032126 Bacteria 2180
45 Ga0395898_0147666 3300037466 Bacteria 2250
46 Ga0395901_0016575 3300038443 Bacteria 7509
47 Ga0436362_0943849 3300039453 Bacteria 7282
48 Ga0439436_0001430 3300041404 Bacteria 6914
49 Ga0439433_0000719 3300041999 Bacteria 6455
50 Ga0439448_0001312 3300042005 Bacteria 6354
51 Ga0439449_0000780 3300042007 Bacteria 12283
52 Ga0439449_0024478 3300042007 Bacteria 2256
53 Ga0439455_0001898 3300042012 Bacteria 3664
54 Ga0439455_0026713 3300042012 Bacteria 1411
55 Ga0439457_003473 3300042014 Bacteria 4285
56 Ga0450903_000345 3300042138 Bacteria 10222
57 Ga0450903_009354 3300042138 Bacteria 1598
58 Ga0439464_0017397 3300042439 Bacteria 1949
59 Ga0450901_002456 3300042533 Bacteria 1998
60 Ga0466972_0000961 3300044658 Bacteria 13842
61 Ga0466972_0019392 3300044658 Bacteria 3401
62 Ga0466972_0077489 3300044658 Bacteria 1583
63 Ga0466966_0009927 3300044684 Bacteria 6313
64 Ga0466961_0186015 3300044693 Bacteria 1289
65 Ga0466963_0010400 3300044694 Bacteria 5632
66 Ga0466970_0004354 3300044765 Bacteria 6973
67 Ga0466960_0008135 3300044901 Bacteria 4284
68 Ga0466960_0021088 3300044901 Bacteria 2896
69 Ga0466960_0074261 3300044901 Bacteria 1699
70 Ga0466959_0068184 3300045049 Bacteria 2578
71 Ga0466958_0027955 3300045836 Bacteria 3340
72 Ga0466967_0013849 3300045976 Bacteria 6254
73 Ga0466967_0090704 3300045976 Bacteria 2776
74 Ga0466967_0186093 3300045976 Bacteria 1961
75 Ga0466967_0417559 3300045976 Bacteria 1307
76 Ga0495603_0002317 3300046455 Bacteria 11172
77 Ga0495629_0001866 3300046459 Bacteria 16459
78 Ga0495613_0015618 3300046689 Bacteria 5650
79 Ga0495589_0166116 3300046794 Bacteria 1050
80 Ga0495604_0000735 3300047317 Bacteria 27516
81 Ga0495636_0003728 3300047318 Bacteria 5933
82 Ga0495636_0033557 3300047318 Bacteria 2109
83 Ga0495676_0011126 3300047321 Bacteria 8130
84 Ga0495676_0035035 3300047321 Bacteria 4203
85 Ga0495687_001773 3300047443 Bacteria 19035
86 Ga0495675_0153623 3300047444 Bacteria 1421
87 Ga0495685_001033 3300047447 Bacteria 8474
88 Ga0495685_013166 3300047447 Bacteria 2806
89 Ga0495614_0014612 3300048089 Bacteria 3433
90 Ga0496108_0118622 3300048911 Bacteria 2268
91 Ga0501031_0047136 3300049568 Bacteria 2809
92 Ga0501032_0000839 3300049569 Bacteria 24970
93 Ga0501032_0033335 3300049569 Bacteria 3529
94 Ga0501033_0018546 3300049570 Bacteria 5258
95 Ga0501034_0003222 3300049571 Bacteria 18678
96 Ga0501034_0004538 3300049571 Bacteria 15431
97 Ga0501034_0024250 3300049571 Bacteria 6169
98 Ga0501036_0000654 3300049572 Bacteria 25428
99 Ga0501036_0010102 3300049572 Bacteria 7779
100 Ga0501037_0015364 3300049573 Bacteria 5633
101 Ga0501039_0044196 3300049575 Bacteria 3440
102 Ga0501039_0058177 3300049575 Bacteria 2993
103 Ga0501040_0003799 3300049576 Bacteria 9793
104 Ga0501043_0002202 3300049579 Bacteria 16611
105 Ga0501043_0002533 3300049579 Bacteria 15457
106 Ga0501046_0010520 3300049580 Bacteria 7936
107 Ga0501047_0000048 3300049581 Bacteria 167850
108 Ga0501047_0002881 3300049581 Bacteria 16314
109 Ga0501047_0119819 3300049581 Bacteria 2514
110 Ga0501067_0000870 3300049583 Bacteria 16214
111 Ga0501067_0053167 3300049583 Bacteria 2244
112 Ga0501068_0000677 3300049584 Bacteria 17420
113 Ga0501070_0001681 3300049586 Bacteria 19595
114 Ga0501071_0000823 3300049587 Bacteria 16556
115 Ga0501072_0007750 3300049588 Bacteria 8153
116 Ga0501074_0005788 3300049590 Bacteria 8915
117 Ga0501076_0045503 3300049592 Bacteria 3465
118 Ga0501077_0018832 3300049593 Bacteria 4369
119 Ga0501083_0023840 3300049744 Bacteria 4243
120 Ga0501035_0001352 3300049822 Bacteria 25241
121 Ga0501035_0016254 3300049822 Bacteria 6866
122 Ga0501035_0084040 3300049822 Bacteria 2808
123 Ga0501035_0120850 3300049822 Bacteria 2290
124 Ga0501044_0000401 3300049823 Bacteria 53413
125 Ga0501044_0001734 3300049823 Bacteria 25480
126 Ga0501044_0124853 3300049823 Bacteria 2571
127 nmdc:mga03683_703_c1 3300050489 Bacteria 9615
128 nmdc:mga00v17_5414_c1 3300050491 Bacteria 6724
129 nmdc:mga0yw44_8350_c1 3300050492 Bacteria 5152
130 nmdc:mga0k408_65252_c1 3300050493 Bacteria 2119
131 nmdc:mga06z11_2146_c1 3300050494 Bacteria 7484
132 nmdc:mga07m45_93072_c1 3300050496 Bacteria 1728
133 nmdc:mga0qj67_63590_c1 3300050509 Bacteria 2934
134 nmdc:mga06r32_341722_c1 3300050510 Bacteria 1481
135 nmdc:mga06r32_87425_c1 3300050510 Bacteria 3041
136 Ga0500660_000331 3300053100 Bacteria 18515
137 Ga0501084_0001951 3300054114 Bacteria 16471
138 Ga0590071_013800 3300059421 Bacteria 1893
139 Ga0466962_0025293 3300061719 Bacteria 2850
140 2995469115 2995463766 Bacteria 8577691
141 2547411666 2547132111 Bacteria 8013147
142 2644017334 2643221601 Bacteria 7493239
143 2644173705 2643221631 Bacteria 8168043
144 2644628683 2643221714 Bacteria 9015452
145 2768644593 2767802112 Bacteria 6465194
146 2784588421 2784132148 Bacteria 8627943
147 2786670396 2786546132 Bacteria 10419719
148 2808920392 2808606375 Bacteria 9466072
149 2809232022 2808606448 Bacteria 8656184
150 2812358401 2811994879 Bacteria 9313447
151 2812480749 2811994917 Bacteria 7761064
152 2852636897 2852635781 Bacteria 8251373
153 2862514581 2862507626 Bacteria 9425308
154 2862705580 2862705112 Bacteria 6563286
155 2867349535 2867346516 Bacteria 7608576
156 2912720285 2912715099 Bacteria 9460473
157 2912724509 2912723979 Bacteria 8557534
158 2946067477 2946064051 Bacteria 8957905
159 2946075727 2946072368 Bacteria 8999607
160 2947229526 2947224130 Bacteria 9938529
161 2954676742 2954673503 Bacteria 9685905
162 2954687424 2954682443 Bacteria 9862841
163 2990046881 2990044586 Bacteria 6603797
164 3006496253 3006493962 Bacteria 8825450
165 8008485667 8008485437 Bacteria 7198341
166 8023628841 8023623736 Bacteria 8593882
167 8025530141 8025524527 Bacteria 7197316
168 rootH1_10020416
169 Ga0006562J51391_1073696
170 Ga0006562J51391_1073697
171 Ga0065707_10098535
172 Ga0070683_100017848
173 Ga0070670_100049379
174 Ga0070692_10166445
175 Ga0070688_100202643
176 Ga0070678_100090244
177 Ga0070685_10042713
178 Ga0070706_100000497
179 Ga0070706_100040379
180 Ga0070672_100330037
181 Ga0068855_100259425
182 Ga0068856_100189150
183 Ga0081455_10013689
184 Ga0081455_10022115
185 Ga0081538_10048977
186 Ga0075364_10002419
187 Ga0075364_10010727
188 Ga0075367_10009861
189 Ga0075370_10003412
190 Ga0075430_100074532
191 Ga0075431_100007528
192 Ga0075431_100288483
193 Ga0105246_10001087
194 Ga0183367_1005
195 Ga0207697_10002895
196 Ga0207688_10018320
197 Ga0207684_10000483
198 Ga0207650_10148271
199 Ga0207661_10083824
200 Ga0207658_10335976
201 Ga0207683_10109274
202 Ga0307512_10071632
203 Ga0316182_1148228
204 Ga0307513_10049861
205 Ga0307514_10012856
206 Ga0307516_10006133
207 Ga0307406_10236556
208 Ga0307407_10094966
209 Ga0307407_10120087
210 Ga0307409_100306616
211 Ga0307415_100093854
212 Ga0395898_0147666
213 Ga0395901_0016575
214 Ga0436362_0943849
215 Ga0439436_0001430
216 Ga0439433_0000719
217 Ga0439448_0001312
218 Ga0439449_0000780
219 Ga0439449_0024478
220 Ga0439455_0001898
221 Ga0439455_0026713
222 Ga0439457_003473
223 Ga0450903_000345
224 Ga0450903_009354
225 Ga0439464_0017397
226 Ga0450901_002456
227 Ga0466972_0000961
228 Ga0466972_0019392
229 Ga0466972_0077489
230 Ga0466966_0009927
231 Ga0466961_0186015
232 Ga0466963_0010400
233 Ga0466970_0004354
234 Ga0466960_0008135
235 Ga0466960_0021088
236 Ga0466960_0074261
237 Ga0466959_0068184
238 Ga0466958_0027955
239 Ga0466967_0013849
240 Ga0466967_0090704
241 Ga0466967_0186093
242 Ga0466967_0417559
243 Ga0495603_0002317
244 Ga0495629_0001866
245 Ga0495613_0015618
246 Ga0495589_0166116
247 Ga0495604_0000735
248 Ga0495636_0003728
249 Ga0495636_0033557
250 Ga0495676_0011126
251 Ga0495676_0035035
252 Ga0495687_001773
253 Ga0495675_0153623
254 Ga0495685_001033
255 Ga0495685_013166
256 Ga0495614_0014612
257 Ga0496108_0118622
258 Ga0501031_0047136
259 Ga0501032_0000839
260 Ga0501032_0033335
261 Ga0501033_0018546
262 Ga0501034_0003222
263 Ga0501034_0004538
264 Ga0501034_0024250
265 Ga0501036_0000654
266 Ga0501036_0010102
267 Ga0501037_0015364
268 Ga0501039_0044196
269 Ga0501039_0058177
270 Ga0501040_0003799
271 Ga0501043_0002202
272 Ga0501043_0002533
273 Ga0501046_0010520
274 Ga0501047_0000048
275 Ga0501047_0002881
276 Ga0501047_0119819
277 Ga0501067_0000870
278 Ga0501067_0053167
279 Ga0501068_0000677
280 Ga0501070_0001681
281 Ga0501071_0000823
282 Ga0501072_0007750
283 Ga0501074_0005788
284 Ga0501076_0045503
285 Ga0501077_0018832
286 Ga0501083_0023840
287 Ga0501035_0001352
288 Ga0501035_0016254
289 Ga0501035_0084040
290 Ga0501035_0120850
291 Ga0501044_0000401
292 Ga0501044_0001734
293 Ga0501044_0124853
294 nmdc:mga03683_703_c1
295 nmdc:mga00v17_5414_c1
296 nmdc:mga0yw44_8350_c1
297 nmdc:mga0k408_65252_c1
298 nmdc:mga06z11_2146_c1
299 nmdc:mga07m45_93072_c1
300 nmdc:mga0qj67_63590_c1
301 nmdc:mga06r32_341722_c1
302 nmdc:mga06r32_87425_c1
303 Ga0500660_000331
304 Ga0501084_0001951
305 Ga0590071_013800
306 Ga0466962_0025293
307 2995469115
308 2547411666
309 2644017334
310 2644173705
311 2644628683
312 2768644593
313 2784588421
314 2786670396
315 2808920392
316 2809232022
317 2812358401
318 2812480749
319 2852636897
320 2862514581
321 2862705580
322 2867349535
323 2912720285
324 2912724509
325 2946067477
326 2946075727
327 2947229526
328 2954676742
329 2954687424
330 2990046881
331 3006496253
332 8008485667
333 8023628841
334 8025530141

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08544

GHMP_kinases_C

GHMP kinases C terminal

304

386

0.95

PF10509

GalKase_gal_bdg

Galactokinase galactose-binding signature

32

81

0.95

PF00288

GHMP_kinases_N

GHMP kinases N terminal domain

116

204

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1s4e-assembly9.cif.gz_I pyrococcus furiosus galactokinase in complex with galactose, adp and magnesium 0.9646 19 349
1s4e-assembly4.cif.gz_D pyrococcus furiosus galactokinase in complex with galactose, adp and magnesium 0.9635 19 349
2dei-assembly1.cif.gz_A crystal structure of galaktokinase from pyrococcus horikoshii with amp-pnp and galactose 0.963 19 349
1s4e-assembly5.cif.gz_E pyrococcus furiosus galactokinase in complex with galactose, adp and magnesium 0.963 18 348
2dej-assembly1.cif.gz_A crystal structure of galaktokinase from pyrococcus horikoshii with amp-pn and galactose 0.961 19 349
ID Description Score Start End Superfamily
1s4eE01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9641 18 194 3.30.230.10
af_P0A6T3_2_205_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9635 3 197 3.30.230.10
1s4eE01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9587 18 194 3.30.230.10
af_P9WN63_1_186_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9578 19 194 3.30.230.10
af_Q9SEE5_9_238_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9306 3 196 3.30.230.10
ID Description Score Start End GO Terms
AF-A0A831JLE4-F1-model_v4 Galactokinase (EC 2.7.1.6) 0.975 41 194 GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-D4NWT5-F1-model_v4 Galactokinase 0.9709 86 198 GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-A0A4Q5TRZ8-F1-model_v4 Galactokinase 0.969 1 194 GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-X7V2W6-F1-model_v4 deleted 0.9688 19 194
AF-A0A5D0I8T7-F1-model_v4 Galactokinase 0.9688 50 194 GO:0004335
GO:0005524
GO:0005829
GO:0006012

Map