F248534

General Info

Members Datasets Scaffolds Average Seq Length
166 127 332 240

Family's Representative Sequence

Representative Sequence 3300025928|Ga0207700_10603980|Ga0207700_106039801
Length 283
Sequence MAGRSPGHDDRGSDVRPAIGICTSLEYARWGVWDQRAALLPWGYMEAIQRAGGLVTMIPPDPVLVTHPDEMLDRIDGLILAGGADIDPSSYGATPHPETKRTVPERDHTEIALVRRAVERDMPMLGICRGMQLLNVAMGGTLHQHIPDIVGHEDHRRNPGSFENSDHDVRLDEGSLAARAAGEHVHVTKSHHHQGVDEIGEGLVVTGRSELDGLVETIEVPTCRYVLGVQWHPEADERSRVIGTLVEQARQYRDERTSAAAWCPEAEIREQRGEWLGVDGGWG

Samples

Sample ID Description Type Environment
1 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
44 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
45 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
65 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
66 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
67 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
68 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
69 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
70 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
71 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
72 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
73 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
74 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
75 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
76 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
77 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
78 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
79 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
80 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
81 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
82 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
83 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
88 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
89 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
90 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
91 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
92 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
93 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
94 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
97 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
98 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
104 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
108 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
109 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
110 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
111 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
112 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
113 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
114 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
115 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
116 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
117 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
118 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
119 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
120 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
121 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
122 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
123 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
124 2867369537 Streptomyces sp. Z26 Isolate Unclassified
125 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
126 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
127 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.17
Metatranscriptomes 4.22
Isolates 3.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.41
Nodule 0
Rhizoplane 12.65
Rhizosphere 78.92
Stem 0
Stem Tuber 0
Unclassified 1.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207700_10603980 3300025928 Bacteria 976
2 JGI24740J21852_10014591 3300001979 Bacteria 2892
3 JGI25407J50210_10005457 3300003373 Bacteria 3126
4 Ga0070683_100050318 3300005329 Bacteria 3857
5 Ga0070683_100234537 3300005329 Bacteria 1744
6 Ga0070683_100328397 3300005329 Bacteria 1456
7 Ga0068869_100124642 3300005334 Bacteria 1974
8 Ga0068868_100005379 3300005338 Bacteria 8995
9 Ga0068868_100084132 3300005338 Bacteria 2555
10 Ga0070661_100025165 3300005344 Bacteria 4276
11 Ga0070692_10109536 3300005345 Bacteria 1525
12 Ga0070714_100118051 3300005435 Bacteria 2357
13 Ga0070714_100154619 3300005435 Bacteria 2070
14 Ga0070713_100669170 3300005436 Bacteria 990
15 Ga0070681_10065902 3300005458 Bacteria 3590
16 Ga0068867_100025849 3300005459 Bacteria 4212
17 Ga0070679_100011859 3300005530 Bacteria 8316
18 Ga0070684_100053921 3300005535 Bacteria 3502
19 Ga0070684_100063237 3300005535 Bacteria 3244
20 Ga0068857_100117310 3300005577 Bacteria 2395
21 Ga0070702_100004143 3300005615 Bacteria 6588
22 Ga0068864_100012641 3300005618 Bacteria 6979
23 Ga0068866_10019013 3300005718 Bacteria 3118
24 Ga0068861_100074874 3300005719 Bacteria 2634
25 Ga0068863_100111090 3300005841 Bacteria 2611
26 Ga0081455_10376457 3300005937 Bacteria 993
27 Ga0081538_10004617 3300005981 Bacteria 12641
28 Ga0081538_10005958 3300005981 Bacteria 10849
29 Ga0081538_10043701 3300005981 Bacteria 2808
30 Ga0081538_10043702 3300005981 Bacteria 2808
31 Ga0081538_10055856 3300005981 Bacteria 2320
32 Ga0081540_1000801 3300005983 Bacteria 28880
33 Ga0081539_10012994 3300005985 Bacteria 6326
34 Ga0070717_10307511 3300006028 Bacteria 1410
35 Ga0075365_10033914 3300006038 Bacteria 3293
36 Ga0075430_100194331 3300006846 Bacteria 1686
37 Ga0075431_100485248 3300006847 Bacteria 1228
38 Ga0105245_10062940 3300009098 Bacteria 3349
39 Ga0105245_10169576 3300009098 Bacteria 2078
40 Ga0105247_10254311 3300009101 Bacteria 1202
41 Ga0114129_10357355 3300009147 Bacteria 1934
42 Ga0114129_10844261 3300009147 Bacteria 1165
43 Ga0105243_10022467 3300009148 Bacteria 4794
44 Ga0105243_10386150 3300009148 Bacteria 1297
45 Ga0105249_10236031 3300009553 Bacteria 1806
46 Ga0105249_10916725 3300009553 Bacteria 943
47 Ga0105239_10217343 3300010375 Bacteria 2143
48 Ga0105239_10708807 3300010375 Bacteria 1151
49 Ga0157369_10072786 3300013105 Bacteria 3688
50 Ga0163163_10164318 3300014325 Bacteria 2266
51 Ga0197907_10048114 3300020069 Bacteria 1215
52 Ga0206356_10000836 3300020070 Bacteria 2893
53 Ga0206349_1398056 3300020075 Bacteria 1194
54 Ga0206352_11007725 3300020078 Bacteria 1352
55 Ga0206350_11211543 3300020080 Bacteria 1060
56 Ga0206353_10337133 3300020082 Bacteria 1939
57 Ga0213876_10020764 3300021384 Bacteria 3473
58 Ga0213875_10007998 3300021388 Bacteria 5434
59 Ga0224712_10002141 3300022467 Bacteria 4805
60 Ga0207707_10022246 3300025912 Bacteria 5543
61 Ga0207662_10018384 3300025918 Bacteria 3965
62 Ga0207649_10088247 3300025920 Bacteria 2025
63 Ga0207652_10020375 3300025921 Bacteria 5460
64 Ga0207687_10038492 3300025927 Bacteria 3269
65 Ga0207700_10156329 3300025928 Bacteria 1890
66 Ga0207664_10831336 3300025929 Bacteria 830
67 Ga0207690_10071225 3300025932 Bacteria 2397
68 Ga0207709_10097540 3300025935 Bacteria 1936
69 Ga0207711_10256848 3300025941 Bacteria 1605
70 Ga0207661_10001786 3300025944 Bacteria 14702
71 Ga0207661_10087032 3300025944 Bacteria 2594
72 Ga0207661_10518814 3300025944 Bacteria 1090
73 Ga0207679_10571349 3300025945 Bacteria 1016
74 Ga0207668_10317462 3300025972 Bacteria 1292
75 Ga0207677_10037842 3300026023 Bacteria 3156
76 Ga0207703_10190541 3300026035 Bacteria 1816
77 Ga0207641_10076433 3300026088 Bacteria 2895
78 Ga0207641_10781599 3300026088 Bacteria 944
79 Ga0207676_10054664 3300026095 Bacteria 3130
80 Ga0207674_10027200 3300026116 Bacteria 6056
81 Ga0207674_10071597 3300026116 Bacteria 3483
82 Ga0268265_10323446 3300028380 Bacteria 1398
83 Ga0307513_10324494 3300031456 Bacteria 1296
84 Ga0307508_10081918 3300031616 Bacteria 2808
85 Ga0316575_10035771 3300031665 Bacteria 1953
86 Ga0316576_10052004 3300031727 Bacteria 2982
87 Ga0316578_10011200 3300031728 Bacteria 4681
88 Ga0307405_10000800 3300031731 Bacteria 12357
89 Ga0307406_10003920 3300031901 Bacteria 8088
90 Ga0307406_10238172 3300031901 Bacteria 1363
91 Ga0307412_10356203 3300031911 Bacteria 1177
92 Ga0307409_100001212 3300031995 Bacteria 12399
93 Ga0307416_100042190 3300032002 Bacteria 3559
94 Ga0307416_100198000 3300032002 Bacteria 1903
95 Ga0307416_100330252 3300032002 Bacteria 1532
96 Ga0307414_10472924 3300032004 Bacteria 1104
97 Ga0307411_10482930 3300032005 Bacteria 1044
98 Ga0307415_100001049 3300032126 Bacteria 12821
99 Ga0307415_100109636 3300032126 Bacteria 2045
100 Ga0307415_100178135 3300032126 Bacteria 1665
101 Ga0307415_100372829 3300032126 Bacteria 1209
102 Ga0307507_10291687 3300033179 Unclassified 1009
103 Ga0316574_0003216 3300035398 Bacteria 8374
104 Ga0316574_0029938 3300035398 Bacteria 3292
105 Ga0316582_0012353 3300036647 Bacteria 4762
106 Ga0316584_0138081 3300036712 Bacteria 1819
107 Ga0395899_0005403 3300037312 Bacteria 9923
108 Ga0395900_0013060 3300037418 Bacteria 8486
109 Ga0395898_0021774 3300037466 Bacteria 6496
110 Ga0395905_0008367 3300037471 Bacteria 10202
111 Ga0436364_0499329 3300037853 Bacteria 31033
112 Ga0395901_0006447 3300038443 Bacteria 11889
113 Ga0395901_0053970 3300038443 Bacteria 4177
114 Ga0436365_0360916 3300039437 Bacteria 4101
115 Ga0439462_0186986 3300042015 Bacteria 588
116 Ga0466972_0048064 3300044658 Bacteria 2062
117 Ga0466972_0108532 3300044658 Bacteria 1312
118 Ga0466966_0033035 3300044684 Bacteria 3350
119 Ga0466963_0205917 3300044694 Bacteria 1376
120 Ga0466970_0000220 3300044765 Bacteria 28133
121 Ga0466957_0008823 3300044842 Bacteria 5741
122 Ga0466957_0044376 3300044842 Bacteria 2694
123 Ga0466958_0002564 3300045836 Bacteria 9173
124 Ga0466967_0021060 3300045976 Bacteria 5283
125 Ga0466967_0727490 3300045976 Bacteria 984
126 Ga0495603_0015403 3300046455 Bacteria 4626
127 Ga0495584_0237951 3300046491 Bacteria 926
128 Ga0495658_0350801 3300046683 Bacteria 938
129 Ga0496101_0885637 3300048904 Unclassified 703
130 Ga0496102_0355219 3300048905 Bacteria 1380
131 Ga0496104_0041965 3300048907 Bacteria 4290
132 Ga0496104_0131117 3300048907 Bacteria 2408
133 Ga0496105_0142254 3300048908 Bacteria 1974
134 Ga0496106_0107418 3300048909 Bacteria 2171
135 Ga0496108_0010927 3300048911 Bacteria 7371
136 Ga0496108_0195629 3300048911 Bacteria 1753
137 Ga0496108_0707101 3300048911 Bacteria 874
138 Ga0496109_0074602 3300048912 Bacteria 3118
139 Ga0496109_0336325 3300048912 Bacteria 1426
140 Ga0496109_0772952 3300048912 Bacteria 898
141 Ga0496110_0024601 3300048913 Bacteria 5134
142 Ga0496110_0041964 3300048913 Bacteria 3993
143 Ga0496110_0110356 3300048913 Bacteria 2471
144 Ga0496111_0038886 3300048914 Bacteria 3409
145 Ga0496112_0034571 3300048915 Bacteria 4918
146 Ga0496113_0026042 3300048916 Bacteria 4178
147 Ga0496113_0045851 3300048916 Bacteria 3244
148 Ga0496113_0369383 3300048916 Bacteria 1151
149 Ga0496114_0372930 3300048917 Bacteria 1263
150 Ga0496126_0000055 3300048929 Bacteria 297958
151 Ga0501080_0033106 3300049742 Bacteria 4824
152 Ga0501081_0380409 3300049743 Bacteria 1043
153 nmdc:mga05p37_370164_c1 3300050507 Bacteria 1682
154 nmdc:mga0qj67_69065_c1 3300050509 Bacteria 2817
155 nmdc:mga08y16_232488_c1 3300050511 Bacteria 1907
156 nmdc:mga0n895_342390_c1 3300050512 Bacteria 1514
157 Ga0500646_0000037 3300053090 Bacteria 37584
158 Ga0500583_0204868 3300053092 Bacteria 980
159 Ga0500588_0001504 3300053146 Bacteria 4457
160 Ga0466962_0024956 3300061719 Bacteria 2870
161 2676485997 2675903059 Bacteria 8644972
162 2867346941 2867346516 Bacteria 7608576
163 2867369972 2867369537 Bacteria 6501581
164 2995727318 2995726249 Bacteria 3470435
165 8055036717 8055034563 Bacteria 3562128
166 8055040860 8055037949 Bacteria 3337834
167 Ga0207700_10603980
168 JGI24740J21852_10014591
169 JGI25407J50210_10005457
170 Ga0070683_100050318
171 Ga0070683_100234537
172 Ga0070683_100328397
173 Ga0068869_100124642
174 Ga0068868_100005379
175 Ga0068868_100084132
176 Ga0070661_100025165
177 Ga0070692_10109536
178 Ga0070714_100118051
179 Ga0070714_100154619
180 Ga0070713_100669170
181 Ga0070681_10065902
182 Ga0068867_100025849
183 Ga0070679_100011859
184 Ga0070684_100053921
185 Ga0070684_100063237
186 Ga0068857_100117310
187 Ga0070702_100004143
188 Ga0068864_100012641
189 Ga0068866_10019013
190 Ga0068861_100074874
191 Ga0068863_100111090
192 Ga0081455_10376457
193 Ga0081538_10004617
194 Ga0081538_10005958
195 Ga0081538_10043701
196 Ga0081538_10043702
197 Ga0081538_10055856
198 Ga0081540_1000801
199 Ga0081539_10012994
200 Ga0070717_10307511
201 Ga0075365_10033914
202 Ga0075430_100194331
203 Ga0075431_100485248
204 Ga0105245_10062940
205 Ga0105245_10169576
206 Ga0105247_10254311
207 Ga0114129_10357355
208 Ga0114129_10844261
209 Ga0105243_10022467
210 Ga0105243_10386150
211 Ga0105249_10236031
212 Ga0105249_10916725
213 Ga0105239_10217343
214 Ga0105239_10708807
215 Ga0157369_10072786
216 Ga0163163_10164318
217 Ga0197907_10048114
218 Ga0206356_10000836
219 Ga0206349_1398056
220 Ga0206352_11007725
221 Ga0206350_11211543
222 Ga0206353_10337133
223 Ga0213876_10020764
224 Ga0213875_10007998
225 Ga0224712_10002141
226 Ga0207707_10022246
227 Ga0207662_10018384
228 Ga0207649_10088247
229 Ga0207652_10020375
230 Ga0207687_10038492
231 Ga0207700_10156329
232 Ga0207664_10831336
233 Ga0207690_10071225
234 Ga0207709_10097540
235 Ga0207711_10256848
236 Ga0207661_10001786
237 Ga0207661_10087032
238 Ga0207661_10518814
239 Ga0207679_10571349
240 Ga0207668_10317462
241 Ga0207677_10037842
242 Ga0207703_10190541
243 Ga0207641_10076433
244 Ga0207641_10781599
245 Ga0207676_10054664
246 Ga0207674_10027200
247 Ga0207674_10071597
248 Ga0268265_10323446
249 Ga0307513_10324494
250 Ga0307508_10081918
251 Ga0316575_10035771
252 Ga0316576_10052004
253 Ga0316578_10011200
254 Ga0307405_10000800
255 Ga0307406_10003920
256 Ga0307406_10238172
257 Ga0307412_10356203
258 Ga0307409_100001212
259 Ga0307416_100042190
260 Ga0307416_100198000
261 Ga0307416_100330252
262 Ga0307414_10472924
263 Ga0307411_10482930
264 Ga0307415_100001049
265 Ga0307415_100109636
266 Ga0307415_100178135
267 Ga0307415_100372829
268 Ga0307507_10291687
269 Ga0316574_0003216
270 Ga0316574_0029938
271 Ga0316582_0012353
272 Ga0316584_0138081
273 Ga0395899_0005403
274 Ga0395900_0013060
275 Ga0395898_0021774
276 Ga0395905_0008367
277 Ga0436364_0499329
278 Ga0395901_0006447
279 Ga0395901_0053970
280 Ga0436365_0360916
281 Ga0439462_0186986
282 Ga0466972_0048064
283 Ga0466972_0108532
284 Ga0466966_0033035
285 Ga0466963_0205917
286 Ga0466970_0000220
287 Ga0466957_0008823
288 Ga0466957_0044376
289 Ga0466958_0002564
290 Ga0466967_0021060
291 Ga0466967_0727490
292 Ga0495603_0015403
293 Ga0495584_0237951
294 Ga0495658_0350801
295 Ga0496101_0885637
296 Ga0496102_0355219
297 Ga0496104_0041965
298 Ga0496104_0131117
299 Ga0496105_0142254
300 Ga0496106_0107418
301 Ga0496108_0010927
302 Ga0496108_0195629
303 Ga0496108_0707101
304 Ga0496109_0074602
305 Ga0496109_0336325
306 Ga0496109_0772952
307 Ga0496110_0024601
308 Ga0496110_0041964
309 Ga0496110_0110356
310 Ga0496111_0038886
311 Ga0496112_0034571
312 Ga0496113_0026042
313 Ga0496113_0045851
314 Ga0496113_0369383
315 Ga0496114_0372930
316 Ga0496126_0000055
317 Ga0501080_0033106
318 Ga0501081_0380409
319 nmdc:mga05p37_370164_c1
320 nmdc:mga0qj67_69065_c1
321 nmdc:mga08y16_232488_c1
322 nmdc:mga0n895_342390_c1
323 Ga0500646_0000037
324 Ga0500583_0204868
325 Ga0500588_0001504
326 Ga0466962_0024956
327 2676485997
328 2867346941
329 2867369972
330 2995727318
331 8055036717
332 8055040860

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07722

Peptidase_C26

Peptidase C26

17

234

0.96

PF00117

GATase

Glutamine amidotransferase class-I

45

241

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
6vtv-assembly1.cif.gz_A crystal structure of puud gamma-glutamyl-gamma-aminobutyrate hydrolase from e. coli 0.8894 4 239
7d50-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.8774 4 240
7d53-assembly1.cif.gz_B spua mutant - h221n with glu 0.8773 6 238
3fij-assembly1.cif.gz_B crystal structure of a uncharacterized protein lin1909 0.8738 4 235
3fij-assembly1.cif.gz_F crystal structure of a uncharacterized protein lin1909 0.8736 4 235
ID Description Score Start End Superfamily
af_O33341_63_305_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9701 4 239 3.40.50.880
af_O33341_63_305_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9503 4 239 3.40.50.880
af_P76038_5_253_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8995 5 239 3.40.50.880
af_P76038_5_253_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8781 5 239 3.40.50.880
af_Q9HDV0_3_233_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8757 6 239 3.40.50.880
ID Description Score Start End GO Terms
AF-A0A259RUZ7-F1-model_v4 Gamma-glutamyl-gamma-aminobutyrate hydrolase 0.9885 1 235 GO:0005829
GO:0006541
GO:0006598
GO:0033969
AF-A0A259RUZ7-F1-model_v4 Gamma-glutamyl-gamma-aminobutyrate hydrolase 0.9802 1 235 GO:0005829
GO:0006541
GO:0006598
GO:0033969
AF-A0A5B1BXA6-F1-model_v4 Gamma-glutamyl-gamma-aminobutyrate hydrolase family protein 0.9773 4 130 GO:0005829
GO:0006598
GO:0033969
AF-A0A7G8WLK6-F1-model_v4 Gamma-glutamyl-gamma-aminobutyrate hydrolase family protein 0.977 4 233 GO:0005829
GO:0006541
GO:0006598
GO:0033969
AF-A0A0E7XNP6-F1-model_v4 Amidotransferase (EC 2.-.-.-, EC 2.4.2.-) 0.971 1 239 GO:0005829
GO:0006541
GO:0006598
GO:0016757
GO:0033969

Map