F248171

General Info

Members Datasets Scaffolds Average Seq Length
166 127 332 311

Family's Representative Sequence

Representative Sequence 3300006847|Ga0075431_100302142|Ga0075431_1003021421
Length 353
Sequence MSNAGSAECGKFVFETSPWRKPMKAIVYTEYGSPDVLHLKELEKPSPKDNEVLIKVHAASVTAGDVNIRGFTFVPPGFGPLPRLMFGLRKPKRTILGTELAGKVEAAGKDVTSFKKGDQVFGIDSSSLGAYAEYVCRPEKGALAIKPANITYEEAAAIPFGAGTALYFLRHVAKIQRGQKILINGASGGVGVYAVQLAKYYGAEVTGVCSTANLDLVKSLGADKVIDYTKGDFRTTGQTYDIIFDTVVGKASFSGCKDALKQNGLYLAVAGGPREMFQMLWTSIRGGKKVLAGSPPEQKEELVFIRDLTERGNIKAVIDRRYPLEQTADAHRYVDTGRKRGSVVITVGNQHNA

Samples

Sample ID Description Type Environment
1 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
11 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
12 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
13 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
14 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
15 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
16 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
17 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
18 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
21 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
22 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
23 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
24 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
25 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
26 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
28 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
40 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
41 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
42 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
43 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
44 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
45 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
46 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
47 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
48 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
49 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
50 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
51 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
52 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
53 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
54 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
55 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
56 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
57 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
58 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
59 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
60 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
61 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
62 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
63 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
66 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
67 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
68 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
69 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
70 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
71 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
72 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
73 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
74 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
75 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
76 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
77 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
78 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
79 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
80 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
81 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
82 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
90 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
91 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
92 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
93 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
94 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
95 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
96 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
97 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
98 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
99 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
100 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
101 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
102 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
103 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
104 2643221732 Bacillus sp. Root239 Isolate Unclassified
105 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
106 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
107 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
108 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
109 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
110 2842682962 Bacillus sp. R-72492 Isolate Unclassified
111 2842882022 Bacillus sp. R-71893 Isolate Unclassified
112 2849139964 Bacillus sp. R-71875 Isolate Unclassified
113 2857581216 Bacillus sp. R-71922 Isolate Unclassified
114 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
115 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
116 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
117 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
118 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
119 2919720352 Priestia megaterium 4340 Isolate Unclassified
120 2929004312 Priestia megaterium 1104 Isolate Unclassified
121 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
122 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
123 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
124 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
125 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
126 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
127 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 81.93
Metatranscriptomes 0.6
Isolates 17.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.61
Nodule 0.6
Rhizoplane 8.43
Rhizosphere 68.07
Stem 0
Stem Tuber 0
Unclassified 15.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075431_100302142 3300006847 Bacteria 1617
2 MBSR1b_contig_234961 2162886012 Bacteria 1588
3 rootL2_10069318 3300003322 Bacteria 2974
4 rootL2_10139131 3300003322 Bacteria 1589
5 Ga0055532_1006489 3300003758 Bacteria 1560
6 Ga0065707_10082771 3300005295 Bacteria 12233
7 Ga0068868_100224838 3300005338 Unclassified 1572
8 Ga0070706_100225797 3300005467 Bacteria 1748
9 Ga0070698_100005552 3300005471 Bacteria 13786
10 Ga0070665_100052089 3300005548 Bacteria 4106
11 Ga0068859_100213850 3300005617 Unclassified 2015
12 Ga0068863_100380540 3300005841 Bacteria 1378
13 Ga0075430_100083439 3300006846 Bacteria 2677
14 Ga0075429_100017969 3300006880 Bacteria 6115
15 Ga0097620_100213870 3300006931 Unclassified 2015
16 Ga0105251_10025375 3300009011 Bacteria 3032
17 Ga0105244_10027700 3300009036 Bacteria 3051
18 Ga0105244_10110910 3300009036 Bacteria 1335
19 Ga0105250_10087772 3300009092 Bacteria 1263
20 Ga0111539_10079835 3300009094 Bacteria 3849
21 Ga0114129_10036015 3300009147 Bacteria 6989
22 Ga0105237_10316609 3300009545 Unclassified 1563
23 Ga0105238_10151297 3300009551 Unclassified 2296
24 Ga0105249_10530334 3300009553 Unclassified 1226
25 Ga0157374_10011161 3300013296 Bacteria 7766
26 Ga0157380_10039667 3300014326 Bacteria 3664
27 Ga0182008_10010098 3300014497 Bacteria 5065
28 Ga0182008_10019893 3300014497 Bacteria 3460
29 Ga0182008_10022574 3300014497 Bacteria 3222
30 Ga0209147_101090 3300025229 Bacteria 11375
31 Ga0209025_1002323 3300025294 Bacteria 20551
32 Ga0209025_1012744 3300025294 Bacteria 5355
33 Ga0209025_1015898 3300025294 Bacteria 4491
34 Ga0207696_1021408 3300025711 Bacteria 2071
35 Ga0207655_1003987 3300025728 Bacteria 10671
36 Ga0207655_1008152 3300025728 Bacteria 6696
37 Ga0207713_1061244 3300025735 Bacteria 1433
38 Ga0207680_10180428 3300025903 Unclassified 1427
39 Ga0207654_10045033 3300025911 Unclassified 2509
40 Ga0207687_10181076 3300025927 Unclassified 1633
41 Ga0207709_10382837 3300025935 Bacteria 1071
42 Ga0207711_10395382 3300025941 Unclassified 1284
43 Ga0207658_10091931 3300025986 Unclassified 2356
44 Ga0207677_10315433 3300026023 Unclassified 1297
45 Ga0268266_10032475 3300028379 Bacteria 4434
46 Ga0265334_10081656 3300028573 Archaea 1190
47 Ga0265331_10025339 3300031250 Archaea 2995
48 Ga0307513_10029657 3300031456 Bacteria 6230
49 Ga0307408_100181829 3300031548 Bacteria 1687
50 Ga0316576_10010776 3300031727 Bacteria 5954
51 Ga0316576_10019375 3300031727 Unclassified 4662
52 Ga0316576_10112064 3300031727 Bacteria 2045
53 Ga0316578_10086882 3300031728 Bacteria 1865
54 Ga0316577_10009291 3300031733 Bacteria 5288
55 Ga0316577_10060558 3300031733 Bacteria 2113
56 Ga0316577_10087277 3300031733 Unclassified 1746
57 Ga0316577_10177100 3300031733 Bacteria 1204
58 Ga0307412_10236289 3300031911 Unclassified 1411
59 Ga0316585_10020812 3300032137 Bacteria 2011
60 Ga0316596_1032188 3300033541 Unclassified 1364
61 Ga0316574_0014833 3300035398 Bacteria 4511
62 Ga0316582_0007664 3300036647 Bacteria 5761
63 Ga0316582_0045671 3300036647 Bacteria 2759
64 Ga0316582_0133355 3300036647 Bacteria 1670
65 Ga0316582_0197056 3300036647 Unclassified 1373
66 Ga0316582_0388113 3300036647 Bacteria 961
67 Ga0316584_0051008 3300036712 Bacteria 3094
68 Ga0316584_0082322 3300036712 Unclassified 2411
69 Ga0316584_0326824 3300036712 Bacteria 1105
70 Ga0395905_0051005 3300037471 Bacteria 3875
71 Ga0316581_0015759 3300037588 Bacteria 2165
72 Ga0316581_0038155 3300037588 Unclassified 1461
73 Ga0400484_28935 3300038725 Unclassified 1090
74 Ga0400483_011860 3300039062 Bacteria 40427
75 Ga0400483_043286 3300039062 Bacteria 1662
76 Ga0400483_160856 3300039062 Unclassified 1232
77 Ga0400483_256084 3300039062 Bacteria 32292
78 Ga0400489_49787 3300039093 Bacteria 3735
79 Ga0400489_60070 3300039093 Bacteria 6712
80 Ga0439439_0013006 3300041406 Bacteria 2015
81 Ga0439433_0009402 3300041999 Bacteria 2128
82 Ga0439449_0000606 3300042007 Bacteria 13469
83 Ga0439462_0030898 3300042015 Bacteria 1417
84 Ga0451577_0422197 3300042876 Bacteria 1211
85 Ga0453683_0087714 3300044673 Bacteria 1950
86 Ga0453684_0000781 3300044712 Bacteria 109749
87 Ga0453684_0004018 3300044712 Bacteria 32027
88 Ga0453684_0009811 3300044712 Bacteria 16595
89 Ga0453684_0013965 3300044712 Bacteria 12941
90 Ga0453684_0028039 3300044712 Bacteria 8050
91 Ga0453684_0032492 3300044712 Bacteria 7302
92 Ga0453684_0067134 3300044712 Bacteria 4563
93 Ga0453684_0067160 3300044712 Bacteria 4562
94 Ga0453684_0069118 3300044712 Unclassified 4481
95 Ga0453684_0252228 3300044712 Bacteria 2026
96 Ga0453684_0559943 3300044712 Bacteria 1258
97 Ga0451576_0047273 3300045051 Unclassified 4525
98 Ga0451576_0087292 3300045051 Unclassified 3244
99 Ga0495603_0020758 3300046455 Bacteria 3977
100 Ga0495584_0015645 3300046491 Bacteria 3869
101 Ga0496101_0009437 3300048904 Bacteria 6413
102 Ga0496103_0031507 3300048906 Bacteria 3230
103 Ga0496105_0001473 3300048908 Bacteria 16602
104 Ga0496105_0460451 3300048908 Bacteria 1003
105 Ga0496106_0001810 3300048909 Bacteria 15983
106 Ga0496108_0014868 3300048911 Bacteria 6350
107 Ga0496109_0015576 3300048912 Bacteria 6630
108 Ga0496110_0007693 3300048913 Bacteria 8622
109 Ga0496110_0009405 3300048913 Bacteria 7914
110 Ga0496111_0036263 3300048914 Bacteria 3525
111 Ga0496111_0109568 3300048914 Bacteria 2033
112 Ga0496112_0008923 3300048915 Bacteria 9000
113 Ga0496112_0022347 3300048915 Bacteria 6027
114 Ga0496113_0146191 3300048916 Bacteria 1862
115 Ga0496116_0048499 3300048919 Bacteria 2850
116 Ga0496118_0234487 3300048921 Bacteria 1056
117 Ga0496119_0018390 3300048922 Bacteria 5203
118 Ga0496121_0177558 3300048924 Bacteria 1541
119 Ga0496122_0021753 3300048925 Bacteria 5726
120 Ga0501032_0221996 3300049569 Bacteria 1230
121 Ga0501033_0021232 3300049570 Bacteria 4899
122 Ga0501038_0354160 3300049574 Bacteria 1143
123 Ga0501043_0100177 3300049579 Bacteria 2278
124 Ga0501047_0173863 3300049581 Bacteria 2022
125 Ga0501067_0009587 3300049583 Bacteria 5363
126 Ga0501070_0104066 3300049586 Bacteria 2348
127 Ga0501071_0457901 3300049587 Unclassified 977
128 Ga0501073_0010086 3300049589 Bacteria 6946
129 Ga0501076_0125631 3300049592 Unclassified 2078
130 Ga0501225_0002959 3300049705 Bacteria 5205
131 Ga0501083_0006161 3300049744 Bacteria 8509
132 nmdc:mga05p37_23770_c1 3300050507 Bacteria 7442
133 nmdc:mga09592_15393_c1 3300050508 Bacteria 6248
134 nmdc:mga09592_41007_c1 3300050508 Archaea 3891
135 Ga0500617_104069 3300053124 Bacteria 1196
136 Ga0501084_0011300 3300054114 Bacteria 7391
137 Ga0501082_0012431 3300060353 Bacteria 7316
138 2511177404 2510917027 Bacteria 5287437
139 2512638841 2512564013 Bacteria 6286191
140 2512731156 2512564039 Bacteria 8739048
141 2524187468 2524023129 Bacteria 6762600
142 2550906748 2548877040 Bacteria 7507281
143 2644725773 2643221732 Bacteria 5756404
144 2672337714 2671180330 Bacteria 5521719
145 2728530840 2728368933 Bacteria 7044283
146 2816861909 2816332186 Bacteria 5331395
147 2819710397 2818991465 Bacteria 5388835
148 2837269119 2837268691 Bacteria 7850704
149 2842686816 2842682962 Bacteria 5589973
150 2842886839 2842882022 Bacteria 6158489
151 2849143402 2849139964 Bacteria 5613304
152 2857583771 2857581216 Bacteria 5522813
153 2857595255 2857591370 Bacteria 6569758
154 2904525729 2904524088 Bacteria 5887454
155 2915599994 2915597211 Bacteria 6475886
156 2919145676 2919143609 Bacteria 6219228
157 2919517617 2919517244 Bacteria 5858162
158 2919721991 2919720352 Bacteria 5986006
159 2929007213 2929004312 Bacteria 5678476
160 2929185163 2929183550 Bacteria 6377511
161 2960321031 2960319331 Bacteria 5502575
162 2960380129 2960375949 Bacteria 5361395
163 8022898738 8022893055 Bacteria 5300455
164 8022920648 8022914991 Bacteria 5584517
165 8054469225 8054465665 Bacteria 7323556
166 8055637245 8055632911 Bacteria 5283357
167 Ga0075431_100302142
168 MBSR1b_contig_234961
169 rootL2_10069318
170 rootL2_10139131
171 Ga0055532_1006489
172 Ga0065707_10082771
173 Ga0068868_100224838
174 Ga0070706_100225797
175 Ga0070698_100005552
176 Ga0070665_100052089
177 Ga0068859_100213850
178 Ga0068863_100380540
179 Ga0075430_100083439
180 Ga0075429_100017969
181 Ga0097620_100213870
182 Ga0105251_10025375
183 Ga0105244_10027700
184 Ga0105244_10110910
185 Ga0105250_10087772
186 Ga0111539_10079835
187 Ga0114129_10036015
188 Ga0105237_10316609
189 Ga0105238_10151297
190 Ga0105249_10530334
191 Ga0157374_10011161
192 Ga0157380_10039667
193 Ga0182008_10010098
194 Ga0182008_10019893
195 Ga0182008_10022574
196 Ga0209147_101090
197 Ga0209025_1002323
198 Ga0209025_1012744
199 Ga0209025_1015898
200 Ga0207696_1021408
201 Ga0207655_1003987
202 Ga0207655_1008152
203 Ga0207713_1061244
204 Ga0207680_10180428
205 Ga0207654_10045033
206 Ga0207687_10181076
207 Ga0207709_10382837
208 Ga0207711_10395382
209 Ga0207658_10091931
210 Ga0207677_10315433
211 Ga0268266_10032475
212 Ga0265334_10081656
213 Ga0265331_10025339
214 Ga0307513_10029657
215 Ga0307408_100181829
216 Ga0316576_10010776
217 Ga0316576_10019375
218 Ga0316576_10112064
219 Ga0316578_10086882
220 Ga0316577_10009291
221 Ga0316577_10060558
222 Ga0316577_10087277
223 Ga0316577_10177100
224 Ga0307412_10236289
225 Ga0316585_10020812
226 Ga0316596_1032188
227 Ga0316574_0014833
228 Ga0316582_0007664
229 Ga0316582_0045671
230 Ga0316582_0133355
231 Ga0316582_0197056
232 Ga0316582_0388113
233 Ga0316584_0051008
234 Ga0316584_0082322
235 Ga0316584_0326824
236 Ga0395905_0051005
237 Ga0316581_0015759
238 Ga0316581_0038155
239 Ga0400484_28935
240 Ga0400483_011860
241 Ga0400483_043286
242 Ga0400483_160856
243 Ga0400483_256084
244 Ga0400489_49787
245 Ga0400489_60070
246 Ga0439439_0013006
247 Ga0439433_0009402
248 Ga0439449_0000606
249 Ga0439462_0030898
250 Ga0451577_0422197
251 Ga0453683_0087714
252 Ga0453684_0000781
253 Ga0453684_0004018
254 Ga0453684_0009811
255 Ga0453684_0013965
256 Ga0453684_0028039
257 Ga0453684_0032492
258 Ga0453684_0067134
259 Ga0453684_0067160
260 Ga0453684_0069118
261 Ga0453684_0252228
262 Ga0453684_0559943
263 Ga0451576_0047273
264 Ga0451576_0087292
265 Ga0495603_0020758
266 Ga0495584_0015645
267 Ga0496101_0009437
268 Ga0496103_0031507
269 Ga0496105_0001473
270 Ga0496105_0460451
271 Ga0496106_0001810
272 Ga0496108_0014868
273 Ga0496109_0015576
274 Ga0496110_0007693
275 Ga0496110_0009405
276 Ga0496111_0036263
277 Ga0496111_0109568
278 Ga0496112_0008923
279 Ga0496112_0022347
280 Ga0496113_0146191
281 Ga0496116_0048499
282 Ga0496118_0234487
283 Ga0496119_0018390
284 Ga0496121_0177558
285 Ga0496122_0021753
286 Ga0501032_0221996
287 Ga0501033_0021232
288 Ga0501038_0354160
289 Ga0501043_0100177
290 Ga0501047_0173863
291 Ga0501067_0009587
292 Ga0501070_0104066
293 Ga0501071_0457901
294 Ga0501073_0010086
295 Ga0501076_0125631
296 Ga0501225_0002959
297 Ga0501083_0006161
298 nmdc:mga05p37_23770_c1
299 nmdc:mga09592_15393_c1
300 nmdc:mga09592_41007_c1
301 Ga0500617_104069
302 Ga0501084_0011300
303 Ga0501082_0012431
304 2511177404
305 2512638841
306 2512731156
307 2524187468
308 2550906748
309 2644725773
310 2672337714
311 2728530840
312 2816861909
313 2819710397
314 2837269119
315 2842686816
316 2842886839
317 2849143402
318 2857583771
319 2857595255
320 2904525729
321 2915599994
322 2919145676
323 2919517617
324 2919721991
325 2929007213
326 2929185163
327 2960321031
328 2960380129
329 8022898738
330 8022920648
331 8054469225
332 8055637245

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

189

295

0.85

PF13602

ADH_zinc_N_2

Zinc-binding dehydrogenase

220

345

0.83

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

48

147

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tqh-assembly1.cif.gz_A structure of the quinone oxidoreductase from coxiella burnetii 0.9107 1 323
5a3j-assembly8.cif.gz_H crystal structure of the chloroplastic gamma-ketol reductase from arabidopsis thaliana bound to 13-oxo-9(z),11(e),15(z)- octadecatrienoic acid. 0.9087 1 321
3tqh-assembly1.cif.gz_A structure of the quinone oxidoreductase from coxiella burnetii 0.9025 1 323
4ide-assembly1.cif.gz_A structure of the fragaria x ananassa enone oxidoreductase in complex with nadp+ and edhmf 0.9006 2 321
5a3j-assembly8.cif.gz_H crystal structure of the chloroplastic gamma-ketol reductase from arabidopsis thaliana bound to 13-oxo-9(z),11(e),15(z)- octadecatrienoic acid. 0.8979 1 321
ID Description Score Start End Superfamily
af_Q869N3_132_238_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9212 137 204 3.90.180.10
af_M0R3N4_1_117_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9199 1 129 3.90.180.10
af_I1KZ26_134_278_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9157 139 271 3.40.50.720
af_A0A0R0I1N1_1_153_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.915 2 148 3.90.180.10
af_P96826_1_126_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9121 1 135 3.90.180.10
ID Description Score Start End GO Terms
AF-X1DL69-F1-model_v4 Alcohol dehydrogenase-like N-terminal domain-containing protein 0.9892 1 135
AF-X1D557-F1-model_v4 Alcohol dehydrogenase-like C-terminal domain-containing protein 0.9857 146 223 GO:0008270
GO:0016491
AF-X1TS32-F1-model_v4 Alcohol dehydrogenase-like N-terminal domain-containing protein 0.9821 1 136
AF-A0A4V3IVC2-F1-model_v4 NAD(P)-dependent alcohol dehydrogenase 0.9812 18 222 GO:0016491
AF-A0A7J9TB54-F1-model_v4 Zinc-binding dehydrogenase 0.98 1 324 GO:0016491

Map