F246783

General Info

Members Datasets Scaffolds Average Seq Length
165 113 330 385

Family's Representative Sequence

Representative Sequence 3300044673|Ga0453683_0010612|Ga0453683_0010612_553_1869
Length 438
Sequence MALTSLRSQRFTESVIRKMTRVAQEYDAINLSQGFPDFDPPKELLQAAHAALDGPYHQYAITWGARDFRQALAEKLSASLGHAVCPETNLVVTCGSTEAMLASLLGLVNPGDRVIVFSPFYENYGADAILSGAEPIYVELVPPSFGFDREELRQAFRRGAKAIIVCNPSNPSGKVFSHAELSFILELANEHDAYVITDEVYEHIVYAPHRHVYAAALPGGRERVVMCNSLSKTYSITGWRLGYVMANPVVIDAVRKVHDFLTVGAAAPLQHAAVTALKFPSTYYEHLRTQYTQRREILLGYLRKTGLEFSVPDGAYYVLVDVSPLGHESDLACCEWLAKEIGVAAVPGSSFFARNEQRYIRLHFAKRDDAASRGRAPATPLALTAIPRVGCLLESRPCDRCGVAPERAVPRAPRWDRRARREPQSGRAWRSQSKSLST

Samples

Sample ID Description Type Environment
1 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
36 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
61 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
62 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
63 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
64 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
67 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
68 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
69 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
70 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
71 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
72 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
73 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
74 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
75 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
78 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
79 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
80 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
81 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
82 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
88 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
89 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
90 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
91 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
92 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
95 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
96 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
97 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
98 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
99 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
100 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
101 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
102 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
103 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
108 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
109 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
110 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
111 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
112 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
113 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane

Type Distribution

Type Percentage (%)
Metagenomes 99.39
Metatranscriptomes 0
Isolates 0.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.61
Nodule 0
Rhizoplane 0.61
Rhizosphere 86.67
Stem 0
Stem Tuber 0
Unclassified 2.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453683_0010612 3300044673 Bacteria 6099
2 rootH2_10008129 3300003320 Bacteria 30568
3 rootL2_10061731 3300003322 Bacteria 1438
4 rootH1_10084746 3300003323 Bacteria 4896
5 Ga0070676_10020062 3300005328 Bacteria 3725
6 Ga0070690_100011996 3300005330 Bacteria 5085
7 Ga0070670_100050256 3300005331 Bacteria 3583
8 Ga0068869_100093846 3300005334 Bacteria 2261
9 Ga0070666_10020668 3300005335 Bacteria 4258
10 Ga0070689_100258229 3300005340 Bacteria 1439
11 Ga0070671_100005567 3300005355 Bacteria 10036
12 Ga0070671_100140024 3300005355 Bacteria 2041
13 Ga0070674_100020920 3300005356 Bacteria 4191
14 Ga0070673_100006794 3300005364 Bacteria 7470
15 Ga0070673_100187245 3300005364 Bacteria 1775
16 Ga0070708_100005723 3300005445 Bacteria 9862
17 Ga0070678_100005982 3300005456 Bacteria 7090
18 Ga0070685_10019395 3300005466 Bacteria 3667
19 Ga0070706_100000385 3300005467 Bacteria 52907
20 Ga0070706_100206287 3300005467 Bacteria 1835
21 Ga0070707_100084428 3300005468 Unclassified 3068
22 Ga0070698_100000652 3300005471 Bacteria 37134
23 Ga0070697_100004400 3300005536 Bacteria 10815
24 Ga0070697_100034601 3300005536 Bacteria 4074
25 Ga0070702_100007998 3300005615 Bacteria 5099
26 Ga0068852_100191369 3300005616 Bacteria 1931
27 Ga0068870_10040292 3300005840 Bacteria 2421
28 Ga0070717_10000003 3300006028 Bacteria 370103
29 Ga0068871_100014569 3300006358 Bacteria 5864
30 Ga0105240_10002137 3300009093 Bacteria 32277
31 Ga0105245_10036520 3300009098 Bacteria 4365
32 Ga0105248_10010702 3300009177 Bacteria 10123
33 Ga0105237_10184793 3300009545 Bacteria 2085
34 Ga0105249_10149481 3300009553 Bacteria 2247
35 Ga0105246_10233839 3300011119 Bacteria 1449
36 Ga0157378_10013895 3300013297 Bacteria 7041
37 Ga0163162_10300395 3300013306 Bacteria 1737
38 Ga0163163_10066962 3300014325 Bacteria 3569
39 Ga0157376_10208948 3300014969 Bacteria 1801
40 Ga0207697_10004153 3300025315 Bacteria 6979
41 Ga0207682_10000530 3300025893 Bacteria 17514
42 Ga0207682_10047526 3300025893 Bacteria 1767
43 Ga0207642_10004516 3300025899 Bacteria 4492
44 Ga0207688_10015375 3300025901 Bacteria 4151
45 Ga0207645_10007404 3300025907 Bacteria 7759
46 Ga0207705_10017987 3300025909 Bacteria 5055
47 Ga0207684_10002937 3300025910 Bacteria 16876
48 Ga0207695_10003110 3300025913 Bacteria 23746
49 Ga0207695_10089180 3300025913 Bacteria 3101
50 Ga0207662_10002512 3300025918 Bacteria 9226
51 Ga0207646_10021229 3300025922 Bacteria 6003
52 Ga0207650_10014858 3300025925 Bacteria 5416
53 Ga0207659_10044584 3300025926 Bacteria 3121
54 Ga0207700_10018992 3300025928 Bacteria 4634
55 Ga0207644_10011939 3300025931 Bacteria 5759
56 Ga0207706_10070615 3300025933 Bacteria 3072
57 Ga0207686_10005703 3300025934 Bacteria 6674
58 Ga0207704_10017986 3300025938 Bacteria 3679
59 Ga0207689_10033855 3300025942 Bacteria 4244
60 Ga0207651_10191817 3300025960 Bacteria 1630
61 Ga0207703_10029963 3300026035 Bacteria 4296
62 Ga0207702_10000347 3300026078 Bacteria 53267
63 Ga0207641_10034152 3300026088 Bacteria 4229
64 Ga0207648_10038286 3300026089 Bacteria 4220
65 Ga0268266_10237778 3300028379 Bacteria 1680
66 Ga0265337_1000502 3300028556 Bacteria 20822
67 Ga0265337_1036309 3300028556 Bacteria 1439
68 Ga0265319_1015000 3300028563 Bacteria 3020
69 Ga0265334_10004753 3300028573 Bacteria 5976
70 Ga0265334_10014945 3300028573 Bacteria 3231
71 Ga0265334_10037027 3300028573 Bacteria 1925
72 Ga0265318_10002732 3300028577 Bacteria 9257
73 Ga0265318_10006444 3300028577 Bacteria 5407
74 Ga0307515_10073549 3300028794 Bacteria 4591
75 Ga0265338_10000259 3300028800 Bacteria 96351
76 Ga0265338_10001771 3300028800 Bacteria 34051
77 Ga0265338_10118634 3300028800 Bacteria 2114
78 Ga0265324_10000856 3300029957 Bacteria 19561
79 Ga0265324_10002255 3300029957 Bacteria 10051
80 Ga0265324_10017245 3300029957 Bacteria 2628
81 Ga0265330_10017858 3300031235 Bacteria 3264
82 Ga0265332_10009407 3300031238 Bacteria 4362
83 Ga0265328_10006747 3300031239 Bacteria 4831
84 Ga0265328_10008023 3300031239 Bacteria 4376
85 Ga0265320_10001010 3300031240 Bacteria 20933
86 Ga0265320_10003350 3300031240 Bacteria 10807
87 Ga0265320_10004971 3300031240 Bacteria 8618
88 Ga0265329_10001514 3300031242 Bacteria 11120
89 Ga0265340_10006778 3300031247 Bacteria 6269
90 Ga0265340_10016728 3300031247 Bacteria 3795
91 Ga0265331_10000638 3300031250 Bacteria 30301
92 Ga0265331_10013445 3300031250 Bacteria 4401
93 Ga0265327_10000342 3300031251 Bacteria 88184
94 Ga0265327_10000878 3300031251 Bacteria 44430
95 Ga0265327_10006273 3300031251 Bacteria 9579
96 Ga0265316_10011908 3300031344 Bacteria 7820
97 Ga0265316_10027653 3300031344 Bacteria 4691
98 Ga0265316_10029358 3300031344 Bacteria 4524
99 Ga0307408_100000459 3300031548 Bacteria 35665
100 Ga0307408_100017597 3300031548 Bacteria 4785
101 Ga0265313_10001480 3300031595 Bacteria 21887
102 Ga0265313_10003852 3300031595 Bacteria 11839
103 Ga0307508_10000449 3300031616 Bacteria 49299
104 Ga0265314_10000675 3300031711 Bacteria 41616
105 Ga0265314_10001733 3300031711 Bacteria 23601
106 Ga0265342_10028519 3300031712 Bacteria 3476
107 Ga0265342_10106923 3300031712 Bacteria 1587
108 Ga0316576_10040081 3300031727 Bacteria 3365
109 Ga0316576_10073708 3300031727 Bacteria 2523
110 Ga0316577_10039627 3300031733 Bacteria 2636
111 Ga0307406_10000026 3300031901 Bacteria 92099
112 Ga0307414_10000034 3300032004 Bacteria 177560
113 Ga0316584_0044177 3300036712 Bacteria 3323
114 Ga0436364_0291378 3300037853 Unclassified 3997
115 Ga0400488_23683 3300038741 Bacteria 10178
116 Ga0400488_54369 3300038741 Bacteria 6211
117 Ga0400489_76974 3300039093 Bacteria 25095
118 Ga0436365_1889837 3300039437 Bacteria 134049
119 Ga0436360_0029095 3300039438 Bacteria 3157
120 Ga0436361_0335667 3300039447 Bacteria 3028
121 Ga0436361_0570484 3300039447 Bacteria 3432
122 Ga0436361_1077812 3300039447 Bacteria 3616
123 Ga0451577_0000064 3300042876 Bacteria 262482
124 Ga0451577_0030477 3300042876 Bacteria 4874
125 Ga0451577_0038917 3300042876 Bacteria 4275
126 Ga0451577_0054415 3300042876 Bacteria 3572
127 Ga0451577_0139552 3300042876 Bacteria 2177
128 Ga0451577_0163179 3300042876 Bacteria 2007
129 Ga0453683_0000265 3300044673 Bacteria 68647
130 Ga0453683_0024738 3300044673 Unclassified 3818
131 Ga0453683_0062163 3300044673 Bacteria 2335
132 Ga0453683_0105106 3300044673 Bacteria 1773
133 Ga0453684_0000061 3300044712 Bacteria 489946
134 Ga0453684_0011195 3300044712 Bacteria 15101
135 Ga0453684_0049027 3300044712 Bacteria 5575
136 Ga0453684_0107877 3300044712 Unclassified 3390
137 Ga0453684_0109603 3300044712 Bacteria 3357
138 Ga0451576_0001702 3300045051 Bacteria 36328
139 Ga0451576_0003622 3300045051 Bacteria 20989
140 Ga0451576_0016245 3300045051 Bacteria 8221
141 Ga0451576_0081498 3300045051 Bacteria 3365
142 Ga0451576_0108165 3300045051 Bacteria 2893
143 Ga0451576_0116503 3300045051 Bacteria 2782
144 Ga0466967_0006917 3300045976 Bacteria 8107
145 Ga0496118_0024792 3300048921 Bacteria 5166
146 Ga0496118_0044824 3300048921 Bacteria 3459
147 Ga0496119_0000234 3300048922 Bacteria 78058
148 Ga0496119_0010478 3300048922 Bacteria 7795
149 Ga0496120_0000487 3300048923 Bacteria 62053
150 Ga0496120_0007663 3300048923 Bacteria 7999
151 Ga0496122_0021925 3300048925 Bacteria 5695
152 Ga0496123_0000776 3300048926 Bacteria 51702
153 Ga0496125_0000138 3300048928 Bacteria 160255
154 Ga0496126_0001569 3300048929 Bacteria 35017
155 Ga0501034_0055333 3300049571 Bacteria 3993
156 Ga0501036_0039043 3300049572 Bacteria 4020
157 Ga0501039_0013872 3300049575 Bacteria 6165
158 Ga0501041_0018728 3300049577 Bacteria 4123
159 Ga0501071_0116949 3300049587 Bacteria 1974
160 Ga0501072_0019643 3300049588 Bacteria 5226
161 Ga0501076_0005240 3300049592 Bacteria 9295
162 Ga0501227_001238 3300049665 Bacteria 5725
163 Ga0501080_0024737 3300049742 Bacteria 5569
164 Ga0500559_0001978 3300053136 Bacteria 11040
165 2787437643 2786546517 Bacteria 6614109
166 Ga0453683_0010612
167 rootH2_10008129
168 rootL2_10061731
169 rootH1_10084746
170 Ga0070676_10020062
171 Ga0070690_100011996
172 Ga0070670_100050256
173 Ga0068869_100093846
174 Ga0070666_10020668
175 Ga0070689_100258229
176 Ga0070671_100005567
177 Ga0070671_100140024
178 Ga0070674_100020920
179 Ga0070673_100006794
180 Ga0070673_100187245
181 Ga0070708_100005723
182 Ga0070678_100005982
183 Ga0070685_10019395
184 Ga0070706_100000385
185 Ga0070706_100206287
186 Ga0070707_100084428
187 Ga0070698_100000652
188 Ga0070697_100004400
189 Ga0070697_100034601
190 Ga0070702_100007998
191 Ga0068852_100191369
192 Ga0068870_10040292
193 Ga0070717_10000003
194 Ga0068871_100014569
195 Ga0105240_10002137
196 Ga0105245_10036520
197 Ga0105248_10010702
198 Ga0105237_10184793
199 Ga0105249_10149481
200 Ga0105246_10233839
201 Ga0157378_10013895
202 Ga0163162_10300395
203 Ga0163163_10066962
204 Ga0157376_10208948
205 Ga0207697_10004153
206 Ga0207682_10000530
207 Ga0207682_10047526
208 Ga0207642_10004516
209 Ga0207688_10015375
210 Ga0207645_10007404
211 Ga0207705_10017987
212 Ga0207684_10002937
213 Ga0207695_10003110
214 Ga0207695_10089180
215 Ga0207662_10002512
216 Ga0207646_10021229
217 Ga0207650_10014858
218 Ga0207659_10044584
219 Ga0207700_10018992
220 Ga0207644_10011939
221 Ga0207706_10070615
222 Ga0207686_10005703
223 Ga0207704_10017986
224 Ga0207689_10033855
225 Ga0207651_10191817
226 Ga0207703_10029963
227 Ga0207702_10000347
228 Ga0207641_10034152
229 Ga0207648_10038286
230 Ga0268266_10237778
231 Ga0265337_1000502
232 Ga0265337_1036309
233 Ga0265319_1015000
234 Ga0265334_10004753
235 Ga0265334_10014945
236 Ga0265334_10037027
237 Ga0265318_10002732
238 Ga0265318_10006444
239 Ga0307515_10073549
240 Ga0265338_10000259
241 Ga0265338_10001771
242 Ga0265338_10118634
243 Ga0265324_10000856
244 Ga0265324_10002255
245 Ga0265324_10017245
246 Ga0265330_10017858
247 Ga0265332_10009407
248 Ga0265328_10006747
249 Ga0265328_10008023
250 Ga0265320_10001010
251 Ga0265320_10003350
252 Ga0265320_10004971
253 Ga0265329_10001514
254 Ga0265340_10006778
255 Ga0265340_10016728
256 Ga0265331_10000638
257 Ga0265331_10013445
258 Ga0265327_10000342
259 Ga0265327_10000878
260 Ga0265327_10006273
261 Ga0265316_10011908
262 Ga0265316_10027653
263 Ga0265316_10029358
264 Ga0307408_100000459
265 Ga0307408_100017597
266 Ga0265313_10001480
267 Ga0265313_10003852
268 Ga0307508_10000449
269 Ga0265314_10000675
270 Ga0265314_10001733
271 Ga0265342_10028519
272 Ga0265342_10106923
273 Ga0316576_10040081
274 Ga0316576_10073708
275 Ga0316577_10039627
276 Ga0307406_10000026
277 Ga0307414_10000034
278 Ga0316584_0044177
279 Ga0436364_0291378
280 Ga0400488_23683
281 Ga0400488_54369
282 Ga0400489_76974
283 Ga0436365_1889837
284 Ga0436360_0029095
285 Ga0436361_0335667
286 Ga0436361_0570484
287 Ga0436361_1077812
288 Ga0451577_0000064
289 Ga0451577_0030477
290 Ga0451577_0038917
291 Ga0451577_0054415
292 Ga0451577_0139552
293 Ga0451577_0163179
294 Ga0453683_0000265
295 Ga0453683_0024738
296 Ga0453683_0062163
297 Ga0453683_0105106
298 Ga0453684_0000061
299 Ga0453684_0011195
300 Ga0453684_0049027
301 Ga0453684_0107877
302 Ga0453684_0109603
303 Ga0451576_0001702
304 Ga0451576_0003622
305 Ga0451576_0016245
306 Ga0451576_0081498
307 Ga0451576_0108165
308 Ga0451576_0116503
309 Ga0466967_0006917
310 Ga0496118_0024792
311 Ga0496118_0044824
312 Ga0496119_0000234
313 Ga0496119_0010478
314 Ga0496120_0000487
315 Ga0496120_0007663
316 Ga0496122_0021925
317 Ga0496123_0000776
318 Ga0496125_0000138
319 Ga0496126_0001569
320 Ga0501034_0055333
321 Ga0501036_0039043
322 Ga0501039_0013872
323 Ga0501041_0018728
324 Ga0501071_0116949
325 Ga0501072_0019643
326 Ga0501076_0005240
327 Ga0501227_001238
328 Ga0501080_0024737
329 Ga0500559_0001978
330 2787437643

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

26

373

0.95

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

58

203

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o0r-assembly1.cif.gz_B the three-dimensional structure of n-succinyldiaminopimelate aminotransferase from mycobacterium tuberculosis 0.9654 3 380
1u08-assembly1.cif.gz_A crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9593 1 380
1u08-assembly1.cif.gz_B crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.9543 1 380
3e2y-assembly1.cif.gz_A crystal structure of mouse kynurenine aminotransferase iii in complex with glutamine 0.9537 4 380
1u08-assembly1.cif.gz_A crystal structure and reactivity of ybdl from escherichia coli identify a methionine aminotransferase function. 0.952 1 380
ID Description Score Start End Superfamily
af_A0A1D6I5Q5_168_402_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9745 42 276 3.40.640.10
af_A0A1D6I5Q5_168_402_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9664 42 276 3.40.640.10
af_Q7XDA3_47_275_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9663 47 276 3.40.640.10
1yiyB02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9641 42 278 3.40.640.10
af_P77806_47_284_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.962 44 277 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A538AAI3-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9852 13 380 GO:0003677
GO:0005737
GO:0008409
GO:0009058
GO:0016212
GO:0030170
GO:0140640
AF-A0A534KB29-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9798 20 186 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-A0A352CTG5-F1-model_v4 Aminotransferase (EC 2.6.1.-) 0.978 140 385 GO:0005737
GO:0009058
GO:0016212
GO:0030170
AF-W1PKG7-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.9775 3 382 GO:0005737
GO:0009058
GO:0009507
GO:0016212
GO:0030170
AF-A0A0K9P6L8-F1-model_v4 Aminotransferase 0.977 2 382 GO:0005737
GO:0009058
GO:0016212
GO:0030170

Map