F246672
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 165 | 95 | 330 | 545 |
Family's Representative Sequence
| Representative Sequence | 3300038742|Ga0400486_14681|Ga0400486_14681_6745_8463 |
| Length | 572 |
| Sequence | MVSCDHINICIETGTKLQIKRIYKMTEISNTEEWMALERHWAEVEELSMRDLFQQGPERSEQMSIRQCGIMLDYSKNRLTGRSMSLLLDLARVADVDGWRRRMFSGERLNITENRAVLHVALRNSANHPIWFNGEDVMPSVNAVLQQMEAFSESVRSGDWKGYTGKPISDVVNIGIGGSNLGPLMVCEALKPYQKSGLSMHFVSNVDGTHIAETLSELDPQTTLFIIASKTFTTQETLTNAHSARKWLLDKLQDEEAVARHFVAVSTNAEDVSRFGIDTANMFEFWDWVGGRYSLWSAIGLPIAIALGMRHFYAMLEGAHEMDQHFLHADLSENMPVIMALLGIWYIDFAKAATHAILPYDQYMRYLPDYLQQADMESNGKRVTRFGRPVDYATGPVIWGTAGTDGQHAYYQLIHQGTQLIPCDFIIPVNSHNESGDHHQKLFANCLAQSEALMRGKTRSEAREEMEKAGQEPEQIVDLLPHRIFPGNRPSNTLLVDKITPSRLGSLIALYEHKIFVQGTIWQVNSFDQWGVELGKQLAGVILPELLDEQQSSQHDSSTQGLIRYFHRHRKA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 2 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 8 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 10 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 13 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 14 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 15 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 16 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 17 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 18 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 19 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 20 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 21 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 22 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 23 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 24 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 25 | 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 38 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 40 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 41 | 3300028654 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG | Metagenome | Rhizosphere |
| 42 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 43 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 44 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 45 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 46 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 47 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 48 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 49 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 50 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 51 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 52 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 53 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 54 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 55 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 56 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 57 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 58 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 59 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 60 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 61 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 62 | 3300033541 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 63 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 64 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 65 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 66 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 67 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 68 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 69 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 70 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 71 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 72 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 73 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 74 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 75 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 76 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 77 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 78 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 79 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 80 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 82 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 83 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 84 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 85 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 86 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 87 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 88 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 89 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 90 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 91 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 92 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 93 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 94 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 95 | 2574179768 | Azoarcus communis DSM 12120 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 96.97 |
| Metatranscriptomes | 2.42 |
| Isolates | 0.61 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.21 |
| Nodule | 0 |
| Rhizoplane | 1.82 |
| Rhizosphere | 71.52 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0400486_14681 | 3300038742 | Bacteria | 10166 |
| 2 | Ga0070670_100038911 | 3300005331 | Bacteria | 4089 |
| 3 | Ga0070666_10023307 | 3300005335 | Bacteria | 4030 |
| 4 | Ga0070669_100001376 | 3300005353 | Bacteria | 17550 |
| 5 | Ga0070674_100000575 | 3300005356 | Bacteria | 18538 |
| 6 | Ga0070673_100000323 | 3300005364 | Bacteria | 25188 |
| 7 | Ga0070688_100026723 | 3300005365 | Bacteria | 3433 |
| 8 | Ga0070659_100095018 | 3300005366 | Bacteria | 2394 |
| 9 | Ga0070694_100037965 | 3300005444 | Bacteria | 3197 |
| 10 | Ga0070678_100004776 | 3300005456 | Bacteria | 7726 |
| 11 | Ga0070672_100001610 | 3300005543 | Bacteria | 14032 |
| 12 | Ga0068857_100036394 | 3300005577 | Bacteria | 4361 |
| 13 | Ga0068859_100033389 | 3300005617 | Bacteria | 5167 |
| 14 | Ga0068861_100010308 | 3300005719 | Bacteria | 6484 |
| 15 | Ga0075365_10015546 | 3300006038 | Bacteria | 4606 |
| 16 | Ga0097621_100003238 | 3300006237 | Bacteria | 11194 |
| 17 | Ga0097621_100022395 | 3300006237 | Bacteria | 4904 |
| 18 | Ga0068871_100001805 | 3300006358 | Bacteria | 14441 |
| 19 | Ga0075431_100026615 | 3300006847 | Bacteria | 5933 |
| 20 | Ga0097620_100033389 | 3300006931 | Bacteria | 5167 |
| 21 | Ga0111539_10004105 | 3300009094 | Bacteria | 19101 |
| 22 | Ga0111539_10006405 | 3300009094 | Bacteria | 15182 |
| 23 | Ga0157375_10051956 | 3300013308 | Bacteria | 4027 |
| 24 | Ga0157375_10102451 | 3300013308 | Bacteria | 2947 |
| 25 | Ga0157380_10018305 | 3300014326 | Bacteria | 5198 |
| 26 | Ga0157377_10040560 | 3300014745 | Bacteria | 2578 |
| 27 | Ga0213872_10016796 | 3300021361 | Bacteria | 3393 |
| 28 | Ga0213872_10029513 | 3300021361 | Bacteria | 2515 |
| 29 | Ga0207697_10017524 | 3300025315 | Bacteria | 2942 |
| 30 | Ga0207645_10005966 | 3300025907 | Bacteria | 8771 |
| 31 | Ga0207643_10007106 | 3300025908 | Bacteria | 6004 |
| 32 | Ga0207650_10004175 | 3300025925 | Bacteria | 9872 |
| 33 | Ga0207659_10005709 | 3300025926 | Bacteria | 7577 |
| 34 | Ga0207706_10034886 | 3300025933 | Bacteria | 4475 |
| 35 | Ga0207669_10000931 | 3300025937 | Bacteria | 12388 |
| 36 | Ga0207691_10000059 | 3300025940 | Bacteria | 86972 |
| 37 | Ga0207691_10102361 | 3300025940 | Bacteria | 2555 |
| 38 | Ga0207651_10000076 | 3300025960 | Bacteria | 45430 |
| 39 | Ga0207674_10033429 | 3300026116 | Bacteria | 5384 |
| 40 | Ga0207675_100014516 | 3300026118 | Bacteria | 7342 |
| 41 | Ga0207683_10001726 | 3300026121 | Bacteria | 19489 |
| 42 | Ga0207428_10005921 | 3300027907 | Bacteria | 11321 |
| 43 | Ga0268265_10019095 | 3300028380 | Bacteria | 4758 |
| 44 | Ga0265334_10001283 | 3300028573 | Bacteria | 12154 |
| 45 | Ga0265323_10003359 | 3300028653 | Bacteria | 7092 |
| 46 | Ga0265323_10005278 | 3300028653 | Bacteria | 5491 |
| 47 | Ga0265322_10004661 | 3300028654 | Bacteria | 4074 |
| 48 | Ga0265338_10041279 | 3300028800 | Bacteria | 4317 |
| 49 | Ga0265324_10000957 | 3300029957 | Bacteria | 17953 |
| 50 | Ga0265324_10003576 | 3300029957 | Bacteria | 7328 |
| 51 | Ga0265330_10001664 | 3300031235 | Bacteria | 12612 |
| 52 | Ga0265330_10002374 | 3300031235 | Bacteria | 10322 |
| 53 | Ga0265329_10000177 | 3300031242 | Bacteria | 32295 |
| 54 | Ga0265340_10030665 | 3300031247 | Bacteria | 2695 |
| 55 | Ga0265339_10000006 | 3300031249 | Bacteria | 259593 |
| 56 | Ga0265339_10028229 | 3300031249 | Bacteria | 3193 |
| 57 | Ga0265331_10005391 | 3300031250 | Bacteria | 7731 |
| 58 | Ga0265327_10000070 | 3300031251 | Bacteria | 217350 |
| 59 | Ga0265316_10000043 | 3300031344 | Bacteria | 133134 |
| 60 | Ga0265316_10012163 | 3300031344 | Bacteria | 7726 |
| 61 | Ga0265316_10018079 | 3300031344 | Bacteria | 6071 |
| 62 | Ga0265316_10039970 | 3300031344 | Bacteria | 3763 |
| 63 | Ga0265316_10059413 | 3300031344 | Bacteria | 2973 |
| 64 | Ga0265313_10000315 | 3300031595 | Bacteria | 52585 |
| 65 | Ga0265314_10003060 | 3300031711 | Bacteria | 16483 |
| 66 | Ga0265314_10009512 | 3300031711 | Bacteria | 8195 |
| 67 | Ga0265342_10000061 | 3300031712 | Bacteria | 115218 |
| 68 | Ga0265342_10004278 | 3300031712 | Bacteria | 11313 |
| 69 | Ga0265342_10024461 | 3300031712 | Bacteria | 3812 |
| 70 | Ga0265342_10029230 | 3300031712 | Bacteria | 3424 |
| 71 | Ga0265342_10034801 | 3300031712 | Bacteria | 3087 |
| 72 | Ga0316576_10007394 | 3300031727 | Bacteria | 6915 |
| 73 | Ga0316578_10000369 | 3300031728 | Bacteria | 14379 |
| 74 | Ga0316577_10001049 | 3300031733 | Bacteria | 12488 |
| 75 | Ga0307413_10011617 | 3300031824 | Bacteria | 4343 |
| 76 | Ga0307407_10020087 | 3300031903 | Bacteria | 3415 |
| 77 | Ga0316585_10007479 | 3300032137 | Bacteria | 3150 |
| 78 | Ga0316580_10000578 | 3300032139 | Bacteria | 8599 |
| 79 | Ga0316580_10001477 | 3300032139 | Bacteria | 6153 |
| 80 | Ga0316593_10000369 | 3300032168 | Bacteria | 7959 |
| 81 | Ga0316593_10009053 | 3300032168 | Bacteria | 2798 |
| 82 | Ga0316596_1000172 | 3300033541 | Bacteria | 9190 |
| 83 | Ga0316596_1006153 | 3300033541 | Bacteria | 2779 |
| 84 | Ga0316574_0001062 | 3300035398 | Bacteria | 12522 |
| 85 | Ga0316574_0003555 | 3300035398 | Bacteria | 8053 |
| 86 | Ga0316582_0090196 | 3300036647 | Bacteria | 2017 |
| 87 | Ga0316584_0002349 | 3300036712 | Bacteria | 11931 |
| 88 | Ga0316584_0009022 | 3300036712 | Bacteria | 6900 |
| 89 | Ga0400484_13143 | 3300038725 | Bacteria | 14777 |
| 90 | Ga0400484_17664 | 3300038725 | Bacteria | 2527 |
| 91 | Ga0400484_25841 | 3300038725 | Bacteria | 47339 |
| 92 | Ga0400490_00449 | 3300038726 | Bacteria | 27925 |
| 93 | Ga0400490_13739 | 3300038726 | Bacteria | 2908 |
| 94 | Ga0400490_18168 | 3300038726 | Bacteria | 53638 |
| 95 | Ga0400490_26783 | 3300038726 | Bacteria | 21112 |
| 96 | Ga0400490_34427 | 3300038726 | Bacteria | 54087 |
| 97 | Ga0400490_42727 | 3300038726 | Bacteria | 9069 |
| 98 | Ga0400490_46137 | 3300038726 | Bacteria | 3723 |
| 99 | Ga0400490_50872 | 3300038726 | Bacteria | 33578 |
| 100 | Ga0400485_07339 | 3300038735 | Bacteria | 141809 |
| 101 | Ga0400485_19947 | 3300038735 | Bacteria | 47885 |
| 102 | Ga0400488_36930 | 3300038741 | Bacteria | 2671 |
| 103 | Ga0400488_42044 | 3300038741 | Bacteria | 5973 |
| 104 | Ga0400488_57394 | 3300038741 | Bacteria | 11268 |
| 105 | Ga0400486_07181 | 3300038742 | Bacteria | 38529 |
| 106 | Ga0400486_19415 | 3300038742 | Bacteria | 158382 |
| 107 | Ga0400483_014324 | 3300039062 | Bacteria | 21091 |
| 108 | Ga0400483_034684 | 3300039062 | Bacteria | 9917 |
| 109 | Ga0400483_044730 | 3300039062 | Bacteria | 5585 |
| 110 | Ga0400483_047724 | 3300039062 | Bacteria | 6789 |
| 111 | Ga0400483_054639 | 3300039062 | Bacteria | 3511 |
| 112 | Ga0400483_058566 | 3300039062 | Bacteria | 14513 |
| 113 | Ga0400483_079783 | 3300039062 | Bacteria | 11388 |
| 114 | Ga0400483_107284 | 3300039062 | Bacteria | 12003 |
| 115 | Ga0400483_127740 | 3300039062 | Bacteria | 14794 |
| 116 | Ga0400483_153657 | 3300039062 | Bacteria | 21742 |
| 117 | Ga0400483_158981 | 3300039062 | Bacteria | 21938 |
| 118 | Ga0400483_159963 | 3300039062 | Bacteria | 30812 |
| 119 | Ga0400483_210639 | 3300039062 | Bacteria | 27499 |
| 120 | Ga0400483_241432 | 3300039062 | Bacteria | 2294 |
| 121 | Ga0400483_266942 | 3300039062 | Bacteria | 3883 |
| 122 | Ga0400489_75927 | 3300039093 | Bacteria | 24329 |
| 123 | Ga0400487_18378 | 3300039110 | Bacteria | 4767 |
| 124 | Ga0400487_21430 | 3300039110 | Bacteria | 187786 |
| 125 | Ga0400487_45499 | 3300039110 | Bacteria | 66033 |
| 126 | Ga0400487_51813 | 3300039110 | Bacteria | 3120 |
| 127 | Ga0400487_53721 | 3300039110 | Bacteria | 4935 |
| 128 | Ga0400487_65600 | 3300039110 | Bacteria | 40645 |
| 129 | Ga0436361_0156075 | 3300039447 | Bacteria | 4961 |
| 130 | Ga0436361_0281134 | 3300039447 | Bacteria | 5219 |
| 131 | Ga0436361_0515296 | 3300039447 | Bacteria | 8609 |
| 132 | Ga0436361_0637158 | 3300039447 | Bacteria | 2211 |
| 133 | Ga0451577_0032306 | 3300042876 | Bacteria | 4717 |
| 134 | Ga0453683_0003923 | 3300044673 | Bacteria | 10776 |
| 135 | Ga0453684_0000115 | 3300044712 | Bacteria | 355501 |
| 136 | Ga0453684_0021978 | 3300044712 | Bacteria | 9493 |
| 137 | Ga0453684_0038423 | 3300044712 | Bacteria | 6544 |
| 138 | Ga0453684_0110781 | 3300044712 | Bacteria | 3336 |
| 139 | Ga0453684_0196583 | 3300044712 | Bacteria | 2354 |
| 140 | Ga0466957_0019245 | 3300044842 | Bacteria | 4015 |
| 141 | Ga0451576_0000029 | 3300045051 | Bacteria | 404449 |
| 142 | Ga0451576_0000919 | 3300045051 | Bacteria | 55733 |
| 143 | Ga0451576_0005771 | 3300045051 | Bacteria | 15408 |
| 144 | Ga0451576_0010603 | 3300045051 | Bacteria | 10554 |
| 145 | Ga0451576_0045310 | 3300045051 | Bacteria | 4633 |
| 146 | Ga0466958_0001261 | 3300045836 | Bacteria | 11862 |
| 147 | Ga0495657_0001373 | 3300046675 | Bacteria | 21111 |
| 148 | Ga0496106_0097536 | 3300048909 | Bacteria | 2276 |
| 149 | Ga0496108_0060302 | 3300048911 | Bacteria | 3192 |
| 150 | Ga0496114_0043514 | 3300048917 | Bacteria | 3723 |
| 151 | Ga0501036_0035070 | 3300049572 | Bacteria | 4244 |
| 152 | Ga0501047_0147136 | 3300049581 | Bacteria | 2232 |
| 153 | Ga0501068_0101569 | 3300049584 | Bacteria | 1783 |
| 154 | Ga0501070_0000083 | 3300049586 | Bacteria | 80820 |
| 155 | Ga0501073_0002897 | 3300049589 | Bacteria | 12869 |
| 156 | Ga0501073_0088175 | 3300049589 | Bacteria | 2157 |
| 157 | Ga0501080_0022438 | 3300049742 | Bacteria | 5848 |
| 158 | Ga0501083_0019265 | 3300049744 | Bacteria | 4752 |
| 159 | Ga0501083_0089342 | 3300049744 | Bacteria | 2036 |
| 160 | nmdc:mga0yw44_11278_c1 | 3300050492 | Bacteria | 4606 |
| 161 | nmdc:mga09592_25568_c1 | 3300050508 | Bacteria | 4888 |
| 162 | nmdc:mga0qj67_30655_c1 | 3300050509 | Bacteria | 4187 |
| 163 | nmdc:mga0qj67_94829_c1 | 3300050509 | Bacteria | 2401 |
| 164 | nmdc:mga08y16_1341_c1 | 3300050511 | Bacteria | 24551 |
| 165 | 2574433371 | 2574179768 | Bacteria | 4907129 |
| 166 | Ga0400486_14681 | |||
| 167 | Ga0070670_100038911 | |||
| 168 | Ga0070666_10023307 | |||
| 169 | Ga0070669_100001376 | |||
| 170 | Ga0070674_100000575 | |||
| 171 | Ga0070673_100000323 | |||
| 172 | Ga0070688_100026723 | |||
| 173 | Ga0070659_100095018 | |||
| 174 | Ga0070694_100037965 | |||
| 175 | Ga0070678_100004776 | |||
| 176 | Ga0070672_100001610 | |||
| 177 | Ga0068857_100036394 | |||
| 178 | Ga0068859_100033389 | |||
| 179 | Ga0068861_100010308 | |||
| 180 | Ga0075365_10015546 | |||
| 181 | Ga0097621_100003238 | |||
| 182 | Ga0097621_100022395 | |||
| 183 | Ga0068871_100001805 | |||
| 184 | Ga0075431_100026615 | |||
| 185 | Ga0097620_100033389 | |||
| 186 | Ga0111539_10004105 | |||
| 187 | Ga0111539_10006405 | |||
| 188 | Ga0157375_10051956 | |||
| 189 | Ga0157375_10102451 | |||
| 190 | Ga0157380_10018305 | |||
| 191 | Ga0157377_10040560 | |||
| 192 | Ga0213872_10016796 | |||
| 193 | Ga0213872_10029513 | |||
| 194 | Ga0207697_10017524 | |||
| 195 | Ga0207645_10005966 | |||
| 196 | Ga0207643_10007106 | |||
| 197 | Ga0207650_10004175 | |||
| 198 | Ga0207659_10005709 | |||
| 199 | Ga0207706_10034886 | |||
| 200 | Ga0207669_10000931 | |||
| 201 | Ga0207691_10000059 | |||
| 202 | Ga0207691_10102361 | |||
| 203 | Ga0207651_10000076 | |||
| 204 | Ga0207674_10033429 | |||
| 205 | Ga0207675_100014516 | |||
| 206 | Ga0207683_10001726 | |||
| 207 | Ga0207428_10005921 | |||
| 208 | Ga0268265_10019095 | |||
| 209 | Ga0265334_10001283 | |||
| 210 | Ga0265323_10003359 | |||
| 211 | Ga0265323_10005278 | |||
| 212 | Ga0265322_10004661 | |||
| 213 | Ga0265338_10041279 | |||
| 214 | Ga0265324_10000957 | |||
| 215 | Ga0265324_10003576 | |||
| 216 | Ga0265330_10001664 | |||
| 217 | Ga0265330_10002374 | |||
| 218 | Ga0265329_10000177 | |||
| 219 | Ga0265340_10030665 | |||
| 220 | Ga0265339_10000006 | |||
| 221 | Ga0265339_10028229 | |||
| 222 | Ga0265331_10005391 | |||
| 223 | Ga0265327_10000070 | |||
| 224 | Ga0265316_10000043 | |||
| 225 | Ga0265316_10012163 | |||
| 226 | Ga0265316_10018079 | |||
| 227 | Ga0265316_10039970 | |||
| 228 | Ga0265316_10059413 | |||
| 229 | Ga0265313_10000315 | |||
| 230 | Ga0265314_10003060 | |||
| 231 | Ga0265314_10009512 | |||
| 232 | Ga0265342_10000061 | |||
| 233 | Ga0265342_10004278 | |||
| 234 | Ga0265342_10024461 | |||
| 235 | Ga0265342_10029230 | |||
| 236 | Ga0265342_10034801 | |||
| 237 | Ga0316576_10007394 | |||
| 238 | Ga0316578_10000369 | |||
| 239 | Ga0316577_10001049 | |||
| 240 | Ga0307413_10011617 | |||
| 241 | Ga0307407_10020087 | |||
| 242 | Ga0316585_10007479 | |||
| 243 | Ga0316580_10000578 | |||
| 244 | Ga0316580_10001477 | |||
| 245 | Ga0316593_10000369 | |||
| 246 | Ga0316593_10009053 | |||
| 247 | Ga0316596_1000172 | |||
| 248 | Ga0316596_1006153 | |||
| 249 | Ga0316574_0001062 | |||
| 250 | Ga0316574_0003555 | |||
| 251 | Ga0316582_0090196 | |||
| 252 | Ga0316584_0002349 | |||
| 253 | Ga0316584_0009022 | |||
| 254 | Ga0400484_13143 | |||
| 255 | Ga0400484_17664 | |||
| 256 | Ga0400484_25841 | |||
| 257 | Ga0400490_00449 | |||
| 258 | Ga0400490_13739 | |||
| 259 | Ga0400490_18168 | |||
| 260 | Ga0400490_26783 | |||
| 261 | Ga0400490_34427 | |||
| 262 | Ga0400490_42727 | |||
| 263 | Ga0400490_46137 | |||
| 264 | Ga0400490_50872 | |||
| 265 | Ga0400485_07339 | |||
| 266 | Ga0400485_19947 | |||
| 267 | Ga0400488_36930 | |||
| 268 | Ga0400488_42044 | |||
| 269 | Ga0400488_57394 | |||
| 270 | Ga0400486_07181 | |||
| 271 | Ga0400486_19415 | |||
| 272 | Ga0400483_014324 | |||
| 273 | Ga0400483_034684 | |||
| 274 | Ga0400483_044730 | |||
| 275 | Ga0400483_047724 | |||
| 276 | Ga0400483_054639 | |||
| 277 | Ga0400483_058566 | |||
| 278 | Ga0400483_079783 | |||
| 279 | Ga0400483_107284 | |||
| 280 | Ga0400483_127740 | |||
| 281 | Ga0400483_153657 | |||
| 282 | Ga0400483_158981 | |||
| 283 | Ga0400483_159963 | |||
| 284 | Ga0400483_210639 | |||
| 285 | Ga0400483_241432 | |||
| 286 | Ga0400483_266942 | |||
| 287 | Ga0400489_75927 | |||
| 288 | Ga0400487_18378 | |||
| 289 | Ga0400487_21430 | |||
| 290 | Ga0400487_45499 | |||
| 291 | Ga0400487_51813 | |||
| 292 | Ga0400487_53721 | |||
| 293 | Ga0400487_65600 | |||
| 294 | Ga0436361_0156075 | |||
| 295 | Ga0436361_0281134 | |||
| 296 | Ga0436361_0515296 | |||
| 297 | Ga0436361_0637158 | |||
| 298 | Ga0451577_0032306 | |||
| 299 | Ga0453683_0003923 | |||
| 300 | Ga0453684_0000115 | |||
| 301 | Ga0453684_0021978 | |||
| 302 | Ga0453684_0038423 | |||
| 303 | Ga0453684_0110781 | |||
| 304 | Ga0453684_0196583 | |||
| 305 | Ga0466957_0019245 | |||
| 306 | Ga0451576_0000029 | |||
| 307 | Ga0451576_0000919 | |||
| 308 | Ga0451576_0005771 | |||
| 309 | Ga0451576_0010603 | |||
| 310 | Ga0451576_0045310 | |||
| 311 | Ga0466958_0001261 | |||
| 312 | Ga0495657_0001373 | |||
| 313 | Ga0496106_0097536 | |||
| 314 | Ga0496108_0060302 | |||
| 315 | Ga0496114_0043514 | |||
| 316 | Ga0501036_0035070 | |||
| 317 | Ga0501047_0147136 | |||
| 318 | Ga0501068_0101569 | |||
| 319 | Ga0501070_0000083 | |||
| 320 | Ga0501073_0002897 | |||
| 321 | Ga0501073_0088175 | |||
| 322 | Ga0501080_0022438 | |||
| 323 | Ga0501083_0019265 | |||
| 324 | Ga0501083_0089342 | |||
| 325 | nmdc:mga0yw44_11278_c1 | |||
| 326 | nmdc:mga09592_25568_c1 | |||
| 327 | nmdc:mga0qj67_30655_c1 | |||
| 328 | nmdc:mga0qj67_94829_c1 | |||
| 329 | nmdc:mga08y16_1341_c1 | |||
| 330 | 2574433371 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1u0f-assembly1.cif.gz_B | crystal structure of mouse phosphoglucose isomerase in complex with glucose 6-phosphate | 0.985 | 7 | 552 |
| 3hjb-assembly2.cif.gz_D | 1.5 angstrom crystal structure of glucose-6-phosphate isomerase from vibrio cholerae. | 0.9845 | 2 | 549 |
| 1n8t-assembly1.cif.gz_A | the crystal structure of phosphoglucose isomerase from rabbit muscle | 0.9837 | 7 | 552 |
| 6bzc-assembly1.cif.gz_A | crystal structure of glucose-6-phosphate isomerase from elizabethkingia anophelis with bound glucose-6-phosphate | 0.9834 | 1 | 548 |
| 1jlh-assembly2.cif.gz_D | human glucose-6-phosphate isomerase | 0.9828 | 7 | 552 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3hjbB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 | 0.9713 | 2 | 511 | 3.40.50.10490 |
| 3q88A01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 | 0.9661 | 9 | 511 | 3.40.50.10490 |
| af_A8DZE4_100_294_3.40.50.10490 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 | 0.966 | 100 | 292 | 3.40.50.10490 |
| 3hjbB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 | 0.9622 | 2 | 511 | 3.40.50.10490 |
| af_P49105_102_295_3.40.50.10490 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 | 0.9576 | 106 | 289 | 3.40.50.10490 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-I2GEG2-F1-model_v4 | Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) | 0.9894 | 1 | 549 |
GO:0004347
GO:0005829 GO:0006094 GO:0006096 GO:0048029 GO:0051156 GO:0097367 |
| AF-A0A7S0LK25-F1-model_v4 | Glucose-6-phosphate isomerase (EC 5.3.1.9) | 0.9888 | 64 | 549 |
GO:0004347
GO:0005829 GO:0006094 GO:0006096 GO:0048029 GO:0051156 GO:0097367 |
| AF-G0IVG2-F1-model_v4 | Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) | 0.9885 | 3 | 551 |
GO:0004347
GO:0005829 GO:0006094 GO:0006096 GO:0048029 GO:0051156 GO:0097367 |
| AF-A0A7C4XXW0-F1-model_v4 | Glucose-6-phosphate isomerase (EC 5.3.1.9) | 0.9885 | 1 | 385 |
GO:0004347
GO:0005829 GO:0006094 GO:0006096 GO:0048029 GO:0051156 GO:0097367 |
| AF-A0A4Q3UTD1-F1-model_v4 | Glucose-6-phosphate isomerase (EC 5.3.1.9) | 0.988 | 83 | 484 |
GO:0004347
GO:0005829 GO:0006094 GO:0006096 GO:0048029 GO:0051156 GO:0097367 |