F246258

General Info

Members Datasets Scaffolds Average Seq Length
165 112 155 494

Family's Representative Sequence

Representative Sequence 3300021388|Ga0213875_10007369|Ga0213875_100073692
Length 548
Sequence MRNLGAARMLAAMNLTNIITEAAGRNPGHVALKLDEIELSYAQLSEASAWFAGVLAAKGVARGDRVAIMLPNVPHFAVCYYGALRAGAVVVPLNVLLKRAEIAFHLRDCGAKLLFAWEGFAGEAQPGAQDAQAEWVLVSSRGFEPPLPAVEPRREVADAEPDDTAVILYTSGTTGTPKGAELTHHSLLRNCQIMREAFLPLFHSMGQTCALNATIASGGTLTLLPRFDPGKALEIIERDRVNLFQGVPTMYAAMLHHPERERFDTSTLQVCGSGGSAMPVELMRVFEEVFGCKVLEGYGLSETSPVASFNPPDRERKPGSIGLPVEGVEMKVVDDEDREVGQGELGEIVIRGHNVMKGYWNQPDATAQAIRDGWFHTGDIARIDEDGYFFIVDRKKDMIIRGGYNVYPREIEETLYQHPAVREAAVIGILHDLYGEEVGAAVAVKQGATVSPEELRAYVKERVAAYKYPRHIWFVDELPKGPTGKILKRQIQPPRELNSQAQAAERGAEERWRSCAAKTSRSTPPNTGGRPRREPGPAARTSPTAKPR

Samples

Sample ID Description Type Environment
1 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
2 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
3 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
4 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
5 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
6 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
7 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
8 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
9 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
10 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
27 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
42 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
43 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
44 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
45 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
65 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
73 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
74 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
75 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
76 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
77 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
78 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
79 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
80 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
81 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
82 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
83 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
84 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
85 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
86 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
87 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
88 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
89 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
90 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
91 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
92 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
95 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
96 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
97 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
98 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
101 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
102 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
103 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
104 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
105 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
106 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
107 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
108 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
109 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
110 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
111 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
112 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.94
Metatranscriptomes 0
Isolates 6.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.03
Nodule 0
Rhizoplane 11.52
Rhizosphere 70.3
Stem 0
Stem Tuber 0
Unclassified 15.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068869_100075115 3300005334 Bacteria 2510
2 Ga0070714_100049162 3300005435 Bacteria 3589
3 Ga0070713_100062504 3300005436 Bacteria 3119
4 Ga0070711_100042859 3300005439 Bacteria 3062
5 Ga0070711_100158881 3300005439 Bacteria 1712
6 Ga0070681_10116353 3300005458 Bacteria 2611
7 Ga0070706_100002767 3300005467 Bacteria 17530
8 Ga0070706_100011759 3300005467 Bacteria 8121
9 Ga0070698_100001533 3300005471 Bacteria 25644
10 Ga0070698_100023293 3300005471 Bacteria 6474
11 Ga0070698_100052156 3300005471 Bacteria 4163
12 Ga0070664_100041796 3300005564 Bacteria 3869
13 Ga0070664_100062587 3300005564 Bacteria 3172
14 Ga0068854_100037704 3300005578 Bacteria 3394
15 Ga0068852_100015913 3300005616 Bacteria 5851
16 Ga0081538_10005455 3300005981 Bacteria 11422
17 Ga0081540_1000467 3300005983 Bacteria 39985
18 Ga0081539_10000415 3300005985 Bacteria 90819
19 Ga0070717_10014348 3300006028 Bacteria 6095
20 Ga0070717_10019374 3300006028 Bacteria 5334
21 Ga0070717_10039565 3300006028 Bacteria 3837
22 Ga0075365_10081341 3300006038 Bacteria 2194
23 Ga0075432_10009113 3300006058 Bacteria 3381
24 Ga0075427_10001650 3300006194 Bacteria 2897
25 Ga0075428_100007302 3300006844 Bacteria 12242
26 Ga0075430_100006563 3300006846 Bacteria 9813
27 Ga0075430_100009524 3300006846 Bacteria 8211
28 Ga0075431_100030884 3300006847 Bacteria 5518
29 Ga0075433_10002023 3300006852 Bacteria 15292
30 Ga0075429_100013450 3300006880 Bacteria 7099
31 Ga0075429_100081753 3300006880 Bacteria 2816
32 Ga0111539_10024294 3300009094 Bacteria 7441
33 Ga0105245_10009024 3300009098 Bacteria 8694
34 Ga0114129_10022246 3300009147 Bacteria 9001
35 Ga0114129_10057656 3300009147 Bacteria 5433
36 Ga0114129_10187012 3300009147 Bacteria 2814
37 Ga0105237_10000682 3300009545 Bacteria 47010
38 Ga0105239_10002008 3300010375 Bacteria 26423
39 Ga0157370_10055467 3300013104 Bacteria 3774
40 Ga0157369_10013718 3300013105 Bacteria 9161
41 Ga0157369_10277592 3300013105 Bacteria 1745
42 Ga0157375_10210194 3300013308 Bacteria 2103
43 Ga0163161_10107425 3300017792 Bacteria 2083
44 Ga0213874_10000771 3300021377 Bacteria 6509
45 Ga0213876_10040272 3300021384 Bacteria 2468
46 Ga0213875_10000631 3300021388 Bacteria 28108
47 Ga0213875_10007369 3300021388 Bacteria 5686
48 Ga0213875_10067873 3300021388 Bacteria 1666
49 Ga0207688_10000250 3300025901 Bacteria 24269
50 Ga0207699_10076240 3300025906 Bacteria 2065
51 Ga0207643_10013299 3300025908 Bacteria 4453
52 Ga0207684_10002014 3300025910 Bacteria 20940
53 Ga0207707_10083242 3300025912 Bacteria 2794
54 Ga0207671_10017398 3300025914 Bacteria 5545
55 Ga0207657_10067833 3300025919 Bacteria 3032
56 Ga0207687_10024456 3300025927 Bacteria 4036
57 Ga0207709_10039331 3300025935 Bacteria 2824
58 Ga0207689_10031240 3300025942 Bacteria 4436
59 Ga0207661_10107409 3300025944 Bacteria 2355
60 Ga0207679_10095729 3300025945 Bacteria 2308
61 Ga0207678_10038378 3300026067 Bacteria 4162
62 Ga0207678_10067236 3300026067 Bacteria 3076
63 Ga0207678_10097097 3300026067 Bacteria 2518
64 Ga0207708_10033145 3300026075 Bacteria 3923
65 Ga0207641_10100095 3300026088 Bacteria 2552
66 Ga0207675_100022436 3300026118 Bacteria 5879
67 Ga0207675_100028217 3300026118 Bacteria 5227
68 Ga0207675_100061710 3300026118 Bacteria 3499
69 Ga0207683_10095196 3300026121 Bacteria 2655
70 Ga0207428_10005793 3300027907 Bacteria 11463
71 Ga0265338_10004175 3300028800 Bacteria 19715
72 Ga0307513_10005362 3300031456 Bacteria 16956
73 Ga0307407_10008397 3300031903 Bacteria 4736
74 Ga0307409_100059651 3300031995 Bacteria 2970
75 Ga0307414_10088799 3300032004 Bacteria 2289
76 Ga0395898_0004204 3300037466 Bacteria 15784
77 Ga0395898_0029487 3300037466 Bacteria 5496
78 Ga0395898_0167871 3300037466 Bacteria 2098
79 Ga0395905_0007277 3300037471 Bacteria 11032
80 Ga0436364_0185561 3300037853 Bacteria 4028
81 Ga0436364_0240350 3300037853 Bacteria 4098
82 Ga0436364_0844887 3300037853 Bacteria 24845
83 Ga0395901_0002987 3300038443 Bacteria 17055
84 Ga0395901_0012126 3300038443 Bacteria 8743
85 Ga0395901_0088282 3300038443 Bacteria 3243
86 Ga0395901_0089979 3300038443 Bacteria 3212
87 Ga0436365_0612889 3300039437 Bacteria 3085
88 Ga0436365_0769998 3300039437 Bacteria 7065
89 Ga0436365_1063554 3300039437 Bacteria 4161
90 Ga0436365_1758627 3300039437 Bacteria 4354
91 Ga0436365_1876121 3300039437 Bacteria 4980
92 Ga0436363_0176872 3300039450 Bacteria 3092
93 Ga0436363_1568145 3300039450 Bacteria 20968
94 Ga0436363_1685828 3300039450 Bacteria 5766
95 Ga0436362_0439261 3300039453 Bacteria 4315
96 Ga0439450_001197 3300042008 Bacteria 3725
97 Ga0439462_0019146 3300042015 Bacteria 1781
98 Ga0466963_0007426 3300044694 Bacteria 6532
99 Ga0466963_0054400 3300044694 Bacteria 2660
100 Ga0466963_0088921 3300044694 Bacteria 2101
101 Ga0466968_0039610 3300044735 Bacteria 1984
102 Ga0466960_0009955 3300044901 Bacteria 3936
103 Ga0466960_0063582 3300044901 Bacteria 1817
104 Ga0466959_0019667 3300045049 Bacteria 4967
105 Ga0466959_0108679 3300045049 Bacteria 1981
106 Ga0466958_0010709 3300045836 Bacteria 5144
107 Ga0466958_0011722 3300045836 Bacteria 4947
108 Ga0466967_0001646 3300045976 Bacteria 13210
109 Ga0466967_0007215 3300045976 Bacteria 7986
110 Ga0466967_0014730 3300045976 Bacteria 6107
111 Ga0466967_0087154 3300045976 Bacteria 2830
112 Ga0495650_0000080 3300046471 Bacteria 241533
113 Ga0495652_0159080 3300046529 Bacteria 1756
114 Ga0495657_0127563 3300046675 Bacteria 1597
115 Ga0496100_0000477 3300048903 Bacteria 19224
116 Ga0496100_0004130 3300048903 Bacteria 7657
117 Ga0496101_0002950 3300048904 Bacteria 10462
118 Ga0496101_0116102 3300048904 Bacteria 2019
119 Ga0496102_0012753 3300048905 Bacteria 7277
120 Ga0496102_0118290 3300048905 Bacteria 2473
121 Ga0496105_0036512 3300048908 Bacteria 4049
122 Ga0496106_0019532 3300048909 Bacteria 5027
123 Ga0496107_0004464 3300048910 Bacteria 9486
124 Ga0496109_0000497 3300048912 Bacteria 33627
125 Ga0496109_0063803 3300048912 Bacteria 3370
126 Ga0496109_0070511 3300048912 Bacteria 3207
127 Ga0496109_0153027 3300048912 Bacteria 2160
128 Ga0496110_0023764 3300048913 Bacteria 5216
129 Ga0496112_0027813 3300048915 Bacteria 5455
130 Ga0496112_0250347 3300048915 Bacteria 1723
131 Ga0496113_0113059 3300048916 Bacteria 2116
132 Ga0496114_0066569 3300048917 Bacteria 3020
133 Ga0496114_0107982 3300048917 Bacteria 2382
134 Ga0496126_0012392 3300048929 Bacteria 8740
135 Ga0501042_0037753 3300049578 Bacteria 3429
136 Ga0501047_0189116 3300049581 Bacteria 1923
137 Ga0501069_0009158 3300049585 Bacteria 5228
138 Ga0501072_0024703 3300049588 Bacteria 4678
139 Ga0501076_0014647 3300049592 Bacteria 5912
140 Ga0501076_0073701 3300049592 Bacteria 2734
141 Ga0501080_0050614 3300049742 Bacteria 3866
142 Ga0501045_0045122 3300049824 Bacteria 3210
143 Ga0501045_0053228 3300049824 Bacteria 2958
144 nmdc:mga06z11_113607_c1 3300050494 Bacteria 1502
145 nmdc:mga05p37_23124_c1 3300050507 Bacteria 7542
146 nmdc:mga05p37_71572_c1 3300050507 Bacteria 4266
147 nmdc:mga09592_117338_c1 3300050508 Bacteria 2284
148 nmdc:mga09592_12694_c1 3300050508 Bacteria 6867
149 nmdc:mga0qj67_22871_c1 3300050509 Bacteria 4803
150 nmdc:mga0qj67_22902_c1 3300050509 Bacteria 4800
151 nmdc:mga08y16_64165_c1 3300050511 Bacteria 3836
152 nmdc:mga0a205_14433_c1 3300050515 Bacteria 7369
153 Ga0500556_0000061 3300053104 Bacteria 111417
154 Ga0500556_0001069 3300053104 Bacteria 14015
155 Ga0500616_0015604 3300053153 Bacteria 4339

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048915 Ga0496112_0250347 Ga0496112_0250347_439_1692 398
2 3300049824 Ga0501045_0053228 Ga0501045_0053228_563_1876 406
3 3300039450 Ga0436363_0176872 Ga0436363_0176872_1575_3071 420
4 3300048912 Ga0496109_0063803 Ga0496109_0063803_1913_3343 449
5 3300050494 nmdc:mga06z11_113607_c1 nmdc:mga06z11_113607_c1_28_1428 451
6 3300046675 Ga0495657_0127563 Ga0495657_0127563_198_1574 452
7 3300042015 Ga0439462_0019146 Ga0439462_0019146_350_1741 456
8 3300044901 Ga0466960_0009955 Ga0466960_0009955_2526_3920 456
9 3300013104 Ga0157370_10055467 Ga0157370_100554671 460
10 3300013105 Ga0157369_10277592 Ga0157369_102775921 460
11 3300005564 Ga0070664_100041796 Ga0070664_1000417962 461
12 3300025945 Ga0207679_10095729 Ga0207679_100957292 461
13 3300026088 Ga0207641_10100095 Ga0207641_101000952 461
14 3300037466 Ga0395898_0167871 Ga0395898_0167871_478_1959 461
15 3300048912 Ga0496109_0153027 Ga0496109_0153027_305_1792 463
16 3300049578 Ga0501042_0037753 Ga0501042_0037753_1975_3405 463
17 3300049588 Ga0501072_0024703 Ga0501072_0024703_71_1501 463
18 3300049592 Ga0501076_0014647 Ga0501076_0014647_674_2104 463
19 3300049592 Ga0501076_0073701 Ga0501076_0073701_609_2033 463
20 3300049824 Ga0501045_0045122 Ga0501045_0045122_204_1634 463
21 3300048916 Ga0496113_0113059 Ga0496113_0113059_520_2010 468
22 3300044735 Ga0466968_0039610 Ga0466968_0039610_271_1779 470
23 3300045836 Ga0466958_0011722 Ga0466958_0011722_1242_2771 471
24 3300048915 Ga0496112_0027813 Ga0496112_0027813_308_1789 471
25 3300026067 Ga0207678_10038378 Ga0207678_100383783 474
26 3300005436 Ga0070713_100062504 Ga0070713_1000625042 475
27 3300005439 Ga0070711_100042859 Ga0070711_1000428592 475
28 3300006028 Ga0070717_10039565 Ga0070717_100395653 475
29 3300025906 Ga0207699_10076240 Ga0207699_100762401 475
30 3300045049 Ga0466959_0108679 Ga0466959_0108679_507_1955 476
31 3300048929 Ga0496126_0012392 Ga0496126_0012392_1753_3327 476
32 3300026067 Ga0207678_10067236 Ga0207678_100672362 478
33 3300045976 Ga0466967_0014730 Ga0466967_0014730_3436_4926 478
34 3300037466 Ga0395898_0029487 Ga0395898_0029487_3953_5452 479
35 3300038443 Ga0395901_0002987 Ga0395901_0002987_11894_13393 479
36 3300045976 Ga0466967_0007215 Ga0466967_0007215_802_2301 479
37 iso_pu_bacteria 2884693830 2884703965 479
38 iso_pu_bacteria 2895442618 2895448680 479
39 3300048909 Ga0496106_0019532 Ga0496106_0019532_2622_4124 481
40 3300048910 Ga0496107_0004464 Ga0496107_0004464_5543_7045 481
41 3300048917 Ga0496114_0107982 Ga0496114_0107982_387_1889 481
42 3300005616 Ga0068852_100015913 Ga0068852_1000159132 482
43 3300005983 Ga0081540_1000467 Ga0081540_100046720 482
44 3300006038 Ga0075365_10081341 Ga0075365_100813412 482
45 iso_pu_bacteria 2895427314 2895435457 482
46 3300049581 Ga0501047_0189116 Ga0501047_0189116_208_1707 483
47 3300038443 Ga0395901_0089979 Ga0395901_0089979_24_1556 484
48 3300048903 Ga0496100_0004130 Ga0496100_0004130_494_1996 484
49 3300048904 Ga0496101_0116102 Ga0496101_0116102_494_1996 484
50 3300005985 Ga0081539_10000415 Ga0081539_1000041530 485
51 3300021388 Ga0213875_10007369 Ga0213875_100073692 485
52 3300026118 Ga0207675_100028217 Ga0207675_1000282173 485
53 3300037853 Ga0436364_0185561 Ga0436364_0185561_1899_3599 485
54 iso_pu_bacteria 2784132109 2784470951 485
55 iso_pu_bacteria 2675903060 2676490440 486
56 iso_pu_bacteria 3001889506 3001890876 487
57 3300006844 Ga0075428_100007302 Ga0075428_1000073027 488
58 3300006846 Ga0075430_100006563 Ga0075430_1000065635 488
59 3300006847 Ga0075431_100030884 Ga0075431_1000308842 488
60 3300006880 Ga0075429_100013450 Ga0075429_1000134504 488
61 3300009147 Ga0114129_10022246 Ga0114129_100222467 488
62 3300050507 nmdc:mga05p37_23124_c1 nmdc:mga05p37_23124_c1_2401_3885 488
63 3300050508 nmdc:mga09592_12694_c1 nmdc:mga09592_12694_c1_1441_2925 488
64 3300050509 nmdc:mga0qj67_22871_c1 nmdc:mga0qj67_22871_c1_2076_3560 488
65 iso_pu_bacteria 2842888712 2842889598 488
66 iso_pu_bacteria 2919446982 2919447470 488
67 iso_pu_bacteria 2919713450 2919715435 488
68 3300005439 Ga0070711_100158881 Ga0070711_1001588811 489
69 3300005564 Ga0070664_100062587 Ga0070664_1000625873 489
70 3300025908 Ga0207643_10013299 Ga0207643_100132994 489
71 3300025919 Ga0207657_10067833 Ga0207657_100678332 489
72 3300025927 Ga0207687_10024456 Ga0207687_100244563 489
73 3300025944 Ga0207661_10107409 Ga0207661_101074092 489
74 3300026075 Ga0207708_10033145 Ga0207708_100331453 489
75 3300026118 Ga0207675_100061710 Ga0207675_1000617103 489
76 3300026121 Ga0207683_10095196 Ga0207683_100951962 489
77 3300048905 Ga0496102_0012753 Ga0496102_0012753_4763_6259 489
78 3300048905 Ga0496102_0118290 Ga0496102_0118290_879_2375 489
79 3300053104 Ga0500556_0000061 Ga0500556_0000061_100688_102256 489
80 3300005435 Ga0070714_100049162 Ga0070714_1000491623 490
81 3300006028 Ga0070717_10019374 Ga0070717_100193742 490
82 3300021388 Ga0213875_10000631 Ga0213875_1000063123 490
83 3300037853 Ga0436364_0844887 Ga0436364_0844887_10906_12396 490
84 3300044694 Ga0466963_0054400 Ga0466963_0054400_448_1938 490
85 3300045836 Ga0466958_0010709 Ga0466958_0010709_182_1672 490
86 3300046529 Ga0495652_0159080 Ga0495652_0159080_248_1738 490
87 3300013105 Ga0157369_10013718 Ga0157369_100137186 491
88 3300013308 Ga0157375_10210194 Ga0157375_102101942 491
89 3300017792 Ga0163161_10107425 Ga0163161_101074251 491
90 3300038443 Ga0395901_0088282 Ga0395901_0088282_866_2368 491
91 3300048908 Ga0496105_0036512 Ga0496105_0036512_1734_3233 491
92 3300048912 Ga0496109_0070511 Ga0496109_0070511_1459_2958 491
93 3300048913 Ga0496110_0023764 Ga0496110_0023764_3587_5086 491
94 3300048917 Ga0496114_0066569 Ga0496114_0066569_220_1719 491
95 3300005467 Ga0070706_100002767 Ga0070706_10000276715 492
96 3300005467 Ga0070706_100011759 Ga0070706_1000117595 492
97 3300005471 Ga0070698_100001533 Ga0070698_1000015333 492
98 3300005471 Ga0070698_100052156 Ga0070698_1000521562 492
99 3300006028 Ga0070717_10014348 Ga0070717_100143485 492
100 3300009098 Ga0105245_10009024 Ga0105245_100090245 492
101 3300009147 Ga0114129_10057656 Ga0114129_100576562 492
102 3300009545 Ga0105237_10000682 Ga0105237_100006822 492
103 3300010375 Ga0105239_10002008 Ga0105239_100020083 492
104 3300025910 Ga0207684_10002014 Ga0207684_100020145 492
105 3300025914 Ga0207671_10017398 Ga0207671_100173981 492
106 3300025935 Ga0207709_10039331 Ga0207709_100393312 492
107 3300028800 Ga0265338_10004175 Ga0265338_100041759 492
108 3300044901 Ga0466960_0063582 Ga0466960_0063582_247_1746 492
109 3300050508 nmdc:mga09592_117338_c1 nmdc:mga09592_117338_c1_40_1539 492
110 3300053104 Ga0500556_0001069 Ga0500556_0001069_8769_10271 492
111 3300053153 Ga0500616_0015604 Ga0500616_0015604_337_1839 492
112 iso_pu_bacteria 2808606365 2808875036 492
113 3300005471 Ga0070698_100023293 Ga0070698_1000232932 493
114 3300005981 Ga0081538_10005455 Ga0081538_100054552 493
115 3300006058 Ga0075432_10009113 Ga0075432_100091134 493
116 3300006194 Ga0075427_10001650 Ga0075427_100016502 493
117 3300006846 Ga0075430_100009524 Ga0075430_1000095244 493
118 3300006852 Ga0075433_10002023 Ga0075433_100020237 493
119 3300006880 Ga0075429_100081753 Ga0075429_1000817531 493
120 3300009094 Ga0111539_10024294 Ga0111539_100242943 493
121 3300009147 Ga0114129_10187012 Ga0114129_101870121 493
122 3300021377 Ga0213874_10000771 Ga0213874_100007714 493
123 3300021388 Ga0213875_10067873 Ga0213875_100678731 493
124 3300027907 Ga0207428_10005793 Ga0207428_100057933 493
125 3300037466 Ga0395898_0004204 Ga0395898_0004204_11830_13332 493
126 3300037471 Ga0395905_0007277 Ga0395905_0007277_4662_6164 493
127 3300037853 Ga0436364_0240350 Ga0436364_0240350_754_2259 493
128 3300038443 Ga0395901_0012126 Ga0395901_0012126_1527_3029 493
129 3300039437 Ga0436365_0612889 Ga0436365_0612889_204_1712 493
130 3300039437 Ga0436365_1876121 Ga0436365_1876121_1877_3382 493
131 3300039450 Ga0436363_1568145 Ga0436363_1568145_16171_17676 493
132 3300039453 Ga0436362_0439261 Ga0436362_0439261_2529_4031 493
133 3300042008 Ga0439450_001197 Ga0439450_001197_42_1622 493
134 3300044694 Ga0466963_0088921 Ga0466963_0088921_328_1833 493
135 3300045976 Ga0466967_0001646 Ga0466967_0001646_8670_10175 493
136 3300046471 Ga0495650_0000080 Ga0495650_0000080_78451_79956 493
137 3300048912 Ga0496109_0000497 Ga0496109_0000497_13195_14724 493
138 3300049585 Ga0501069_0009158 Ga0501069_0009158_3624_5129 493
139 3300050507 nmdc:mga05p37_71572_c1 nmdc:mga05p37_71572_c1_2696_4198 493
140 3300050509 nmdc:mga0qj67_22902_c1 nmdc:mga0qj67_22902_c1_1498_3000 493
141 3300050511 nmdc:mga08y16_64165_c1 nmdc:mga08y16_64165_c1_1391_2893 493
142 3300050515 nmdc:mga0a205_14433_c1 nmdc:mga0a205_14433_c1_719_2221 493
143 3300005458 Ga0070681_10116353 Ga0070681_101163532 494
144 3300021384 Ga0213876_10040272 Ga0213876_100402722 494
145 3300025912 Ga0207707_10083242 Ga0207707_100832422 494
146 3300031456 Ga0307513_10005362 Ga0307513_100053622 494
147 3300039437 Ga0436365_0769998 Ga0436365_0769998_3616_5121 494
148 3300039437 Ga0436365_1063554 Ga0436365_1063554_180_1688 494
149 3300039437 Ga0436365_1758627 Ga0436365_1758627_1082_2590 494
150 3300039450 Ga0436363_1685828 Ga0436363_1685828_839_2347 494
151 3300044694 Ga0466963_0007426 Ga0466963_0007426_952_2484 494
152 3300045049 Ga0466959_0019667 Ga0466959_0019667_511_2022 494
153 3300045976 Ga0466967_0087154 Ga0466967_0087154_843_2375 494
154 3300049742 Ga0501080_0050614 Ga0501080_0050614_1555_3072 494
155 3300031903 Ga0307407_10008397 Ga0307407_100083973 495
156 3300031995 Ga0307409_100059651 Ga0307409_1000596512 495
157 3300032004 Ga0307414_10088799 Ga0307414_100887992 495
158 3300048903 Ga0496100_0000477 Ga0496100_0000477_11900_13465 495
159 3300048904 Ga0496101_0002950 Ga0496101_0002950_5475_7040 495
160 3300005334 Ga0068869_100075115 Ga0068869_1000751152 497
161 3300005578 Ga0068854_100037704 Ga0068854_1000377043 497
162 3300025901 Ga0207688_10000250 Ga0207688_100002503 497
163 3300025942 Ga0207689_10031240 Ga0207689_100312403 497
164 3300026067 Ga0207678_10097097 Ga0207678_100970972 497
165 3300026118 Ga0207675_100022436 Ga0207675_1000224364 497

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

410

485

0.97

PF00501

AMP-binding

AMP-binding enzyme

19

360

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7l4g-assembly3.cif.gz_C crystal structure of acetyl-coa synthetase in complex with acetyl adenylate from cryptococcus neoformans h99 0.9408 1 474
5x8f-assembly1.cif.gz_A ternary complex structure of a double mutant i454ra456k of o-succinylbenzoate coa synthetase (mene) from bacillus subtilis bound with amp and its product analogue osb-ncoa at 1.76 angstrom 0.938 6 484
5x8g-assembly2.cif.gz_D binary complex structure of a double mutant i454ra456k of o-succinylbenzoate coa synthetase (mene) from bacillus subtilis bound with its product analogue osb-ncoa at 1.90 angstrom 0.9355 6 484
5zrn-assembly1.cif.gz_A inhibitor bound crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis 0.9294 1 388
2p2j-assembly2.cif.gz_B acetyl-coa synthetase, k609a mutation 0.9293 1 483
ID Description Score Start End Superfamily
af_A0A1D6KNL0_124_190_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.981 395 454 3.30.300.30
af_Q9XV68_424_526_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9643 392 483 3.30.300.30
af_Q54YU1_37_192_3.40.50.980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9634 25 78 3.40.50.980
af_O05295_375_473_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.959 391 484 3.30.300.30
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9586 392 486 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A538IHP9-F1-model_v4 Fatty acid--CoA ligase family protein 0.9809 2 104 GO:0016874
AF-A0A7K2LWU0-F1-model_v4 AMP-binding protein 0.9649 1 131
AF-A0A7C3UP17-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.961 1 78
AF-A0A2D9F669-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9601 392 484 GO:0006631
GO:0031956
AF-A0A2E9FG42-F1-model_v4 Fatty acid--CoA ligase 0.9556 2 484 GO:0006631
GO:0031956

Feature Viewer

pLDDT pTM Quality
91.97 0.89 High
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Predicted Structure (AlphaFold2)

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