F245519

General Info

Members Datasets Scaffolds Average Seq Length
165 146 330 189

Family's Representative Sequence

Representative Sequence 3300005434|Ga0070709_10073409|Ga0070709_100734092
Length 222
Sequence MLTDMEARTGTGNEAGNDGGLDGLGVPDDVERLWMPHRMAYIKGENKPVSGEAGDGCPFCRVPTLDDAEGLVVARGRLVYAVLNLYPYSPGHLLICPYRHVADYTDLDARETMELAAFTQRGMRALRAATNPHGFNLGMNQGTVAGAGIAAHLHQHIVPRWGGDANFMPVIGRTRVLPQLLADTRDTVAEGWAKVEAAEDPEAGSQAAVGRDPVDHDPATAQ

Samples

Sample ID Description Type Environment
1 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
57 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
58 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
59 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
60 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
61 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
62 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
63 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
64 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
67 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
68 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
69 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
70 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
71 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
72 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
73 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
78 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
79 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
80 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
81 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
82 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
83 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
84 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
85 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
86 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
87 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
88 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
89 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
90 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
91 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
94 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
95 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
96 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
97 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
98 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
99 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
100 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
101 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
102 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
103 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
104 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
111 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
112 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
113 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
114 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
115 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
121 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
122 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
125 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
129 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
130 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
131 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
132 2643221613 Oerskovia sp. Root22 Isolate Unclassified
133 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
134 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
135 2643221721 Oerskovia sp. Root918 Isolate Unclassified
136 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
137 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
138 2857479173 Micrococcus sp. R-74225 Isolate Unclassified
139 2857632687 Micrococcus sp. R-73081 Isolate Unclassified
140 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
141 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
142 2870804320 Micrococcus yunnanensis DSM 21948 Isolate Unclassified
143 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
144 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
145 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
146 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.09
Metatranscriptomes 1.82
Isolates 9.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.03
Nodule 0
Rhizoplane 0.61
Rhizosphere 84.85
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070709_10073409 3300005434 Bacteria 2215
2 JGI25406J46586_10068732 3300003203 Bacteria 1118
3 Ga0070683_100123865 3300005329 Bacteria 2443
4 Ga0070677_10188471 3300005333 Bacteria 987
5 Ga0068869_100343755 3300005334 Bacteria 1215
6 Ga0070669_100093081 3300005353 Bacteria 2263
7 Ga0070714_100009971 3300005435 Bacteria 7492
8 Ga0070714_101370917 3300005435 Bacteria 690
9 Ga0070710_10269902 3300005437 Bacteria 1100
10 Ga0070705_100036987 3300005440 Bacteria 2750
11 Ga0070700_100410272 3300005441 Bacteria 1021
12 Ga0070679_100118129 3300005530 Bacteria 2636
13 Ga0068855_100214003 3300005563 Bacteria 2164
14 Ga0068852_100062097 3300005616 Bacteria 3249
15 Ga0068859_100386513 3300005617 Bacteria 1495
16 Ga0068870_10159792 3300005840 Bacteria 1335
17 Ga0068863_100256902 3300005841 Bacteria 1688
18 Ga0068860_100787790 3300005843 Bacteria 964
19 Ga0081455_10000172 3300005937 Bacteria 80655
20 Ga0081539_10001061 3300005985 Bacteria 50266
21 Ga0081539_10027393 3300005985 Bacteria 3611
22 Ga0081539_10028200 3300005985 Bacteria 3535
23 Ga0075364_10011907 3300006051 Bacteria 5299
24 Ga0075370_10027263 3300006353 Bacteria 3169
25 Ga0075428_100821227 3300006844 Bacteria 988
26 Ga0075431_100019297 3300006847 Bacteria 6949
27 Ga0097620_100386524 3300006931 Bacteria 1495
28 Ga0105240_10138885 3300009093 Bacteria 2907
29 Ga0105240_10583953 3300009093 Bacteria 1232
30 Ga0105243_10283291 3300009148 Bacteria 1494
31 Ga0105239_10351871 3300010375 Bacteria 1663
32 Ga0157373_10184298 3300013100 Bacteria 1470
33 Ga0157370_10050290 3300013104 Bacteria 3984
34 Ga0157369_10027091 3300013105 Bacteria 6355
35 Ga0163163_11368583 3300014325 Bacteria 769
36 Ga0206354_10579342 3300020081 Bacteria 1642
37 Ga0206353_10932945 3300020082 Bacteria 656
38 Ga0224712_10000705 3300022467 Bacteria 6905
39 Ga0207692_10347246 3300025898 Bacteria 914
40 Ga0207699_10064283 3300025906 Bacteria 2220
41 Ga0207645_10302337 3300025907 Bacteria 1065
42 Ga0207643_10311451 3300025908 Bacteria 981
43 Ga0207695_10074906 3300025913 Bacteria 3445
44 Ga0207660_10573360 3300025917 Bacteria 918
45 Ga0207652_10043590 3300025921 Bacteria 3820
46 Ga0207681_10083255 3300025923 Bacteria 2264
47 Ga0207700_10009915 3300025928 Bacteria 5979
48 Ga0207664_10021591 3300025929 Bacteria 4790
49 Ga0207689_10192670 3300025942 Bacteria 1682
50 Ga0207689_10426460 3300025942 Bacteria 1107
51 Ga0207661_10114156 3300025944 Bacteria 2290
52 Ga0207668_10009523 3300025972 Bacteria 5828
53 Ga0207658_10159203 3300025986 Bacteria 1849
54 Ga0207708_10390912 3300026075 Bacteria 1148
55 Ga0207641_10112884 3300026088 Bacteria 2412
56 Ga0207674_10031540 3300026116 Bacteria 5566
57 Ga0207683_10444609 3300026121 Bacteria 1195
58 Ga0207698_10139881 3300026142 Bacteria 2083
59 Ga0268266_10211956 3300028379 Bacteria 1777
60 Ga0268264_10185838 3300028381 Bacteria 1891
61 Ga0265334_10003045 3300028573 Bacteria 7658
62 Ga0314311_1235796 3300030733 Bacteria 1077
63 Ga0307513_10000040 3300031456 Bacteria 169846
64 Ga0307413_10060435 3300031824 Bacteria 2333
65 Ga0307410_10000766 3300031852 Bacteria 13524
66 Ga0307406_10005025 3300031901 Bacteria 7210
67 Ga0307407_10004178 3300031903 Bacteria 6086
68 Ga0307412_10301691 3300031911 Bacteria 1266
69 Ga0307409_100000183 3300031995 Bacteria 24466
70 Ga0307409_100058887 3300031995 Bacteria 2986
71 Ga0307409_100495704 3300031995 Bacteria 1188
72 Ga0307409_100547859 3300031995 Bacteria 1135
73 Ga0307416_100000124 3300032002 Bacteria 46509
74 Ga0307414_10023402 3300032004 Bacteria 3918
75 Ga0307411_10392711 3300032005 Bacteria 1145
76 Ga0307415_100167883 3300032126 Bacteria 1708
77 Ga0307507_10000361 3300033179 Bacteria 93081
78 Ga0373934_0107117 3300035086 Bacteria 1132
79 Ga0373940_0033929 3300035088 Bacteria 1374
80 Ga0373932_0033337 3300035112 Bacteria 1446
81 Ga0373942_0000208 3300035207 Bacteria 15227
82 Ga0373937_0952505 3300036401 Bacteria 807
83 Ga0395898_0489409 3300037466 Bacteria 1170
84 Ga0395898_1058961 3300037466 Bacteria 745
85 Ga0395901_0008021 3300038443 Bacteria 10664
86 Ga0395901_0097683 3300038443 Bacteria 3079
87 Ga0436360_0559612 3300039438 Bacteria 2023
88 Ga0436361_0413455 3300039447 Bacteria 941
89 Ga0436363_0524568 3300039450 Bacteria 2413
90 Ga0439436_0007533 3300041404 Bacteria 3350
91 Ga0439439_0000447 3300041406 Bacteria 6988
92 Ga0439466_0010198 3300041411 Bacteria 3494
93 Ga0451793_1583573 3300041452 Bacteria 1155
94 Ga0439449_0000558 3300042007 Bacteria 13999
95 Ga0439457_000689 3300042014 Bacteria 10008
96 Ga0450906_009101 3300042145 Bacteria 1902
97 Ga0450907_058914 3300042146 Bacteria 662
98 Ga0466969_0021103 3300044656 Bacteria 3370
99 Ga0466969_0036792 3300044656 Bacteria 2470
100 Ga0466961_0038786 3300044693 Bacteria 3055
101 Ga0466961_0041546 3300044693 Bacteria 2948
102 Ga0466963_0094162 3300044694 Bacteria 2043
103 Ga0466970_0320667 3300044765 Bacteria 876
104 Ga0466957_0207862 3300044842 Bacteria 1288
105 Ga0466957_0356335 3300044842 Bacteria 993
106 Ga0466960_0009290 3300044901 Bacteria 4048
107 Ga0466960_0172735 3300044901 Bacteria 1167
108 Ga0466960_0591026 3300044901 Bacteria 658
109 Ga0466959_0005311 3300045049 Bacteria 8807
110 Ga0466958_0048849 3300045836 Bacteria 2558
111 Ga0466967_0047998 3300045976 Bacteria 3726
112 Ga0466967_0377037 3300045976 Bacteria 1377
113 Ga0466967_1789600 3300045976 Bacteria 611
114 Ga0495653_0015519 3300046463 Bacteria 6208
115 Ga0495580_0013308 3300046472 Bacteria 6286
116 Ga0495664_0017944 3300046477 Bacteria 4046
117 Ga0495608_0001296 3300046511 Bacteria 17779
118 Ga0495652_0135276 3300046529 Bacteria 1945
119 Ga0495665_0026573 3300046531 Bacteria 3109
120 Ga0495640_0010993 3300046533 Bacteria 6971
121 Ga0495586_0126187 3300046535 Bacteria 1431
122 Ga0495645_0002226 3300046543 Bacteria 13196
123 Ga0495667_0010176 3300046559 Bacteria 6366
124 Ga0495635_0354288 3300046663 Bacteria 979
125 Ga0495657_0030245 3300046675 Bacteria 3794
126 Ga0495613_0078647 3300046689 Bacteria 2398
127 Ga0495581_0003570 3300047315 Bacteria 8936
128 Ga0495604_0441757 3300047317 Bacteria 851
129 Ga0496118_0142796 3300048921 Bacteria 1514
130 Ga0496123_0034356 3300048926 Bacteria 3634
131 Ga0496126_0395937 3300048929 Bacteria 1121
132 Ga0496126_0483893 3300048929 Bacteria 991
133 Ga0501031_0106271 3300049568 Bacteria 1832
134 Ga0501036_0083577 3300049572 Bacteria 2699
135 Ga0501040_0098580 3300049576 Bacteria 2037
136 Ga0501047_0022177 3300049581 Bacteria 6101
137 Ga0501048_0184272 3300049582 Bacteria 1480
138 Ga0501070_0085246 3300049586 Bacteria 2616
139 Ga0501071_0191575 3300049587 Bacteria 1534
140 Ga0501076_0063398 3300049592 Bacteria 2945
141 Ga0501045_0528494 3300049824 Bacteria 876
142 nmdc:mga00v17_1153_c1 3300050491 Bacteria 13875
143 nmdc:mga07m45_58763_c1 3300050496 Bacteria 2176
144 nmdc:mga05p37_329065_c1 3300050507 Bacteria 1805
145 nmdc:mga09592_421089_c1 3300050508 Bacteria 1153
146 Ga0495612_0271220 3300053078 Bacteria 757
147 Ga0495619_0035318 3300053085 Bacteria 3251
148 Ga0495619_0051957 3300053085 Bacteria 2709
149 Ga0500630_172278 3300053159 Bacteria 885
150 Ga0501082_0011202 3300060353 Bacteria 7704
151 2644083275 2643221613 Bacteria 4622396
152 2644456870 2643221681 Bacteria 3707866
153 2644527145 2643221694 Bacteria 4392972
154 2644666441 2643221721 Bacteria 4486924
155 2644670126 2643221722 Bacteria 4247614
156 2729904853 2728369276 Bacteria 5610032
157 2857480269 2857479173 Bacteria 2469263
158 2857634491 2857632687 Bacteria 2448521
159 2861520853 2861520306 Bacteria 8348283
160 2870802595 2870801768 Bacteria 2710986
161 2870804675 2870804320 Bacteria 2552467
162 2887446455 2887443736 Bacteria 4426037
163 2891403670 2891395885 Bacteria 9251614
164 2891556083 2891554331 Bacteria 8812224
165 2935890967 2935890801 Bacteria 4593001
166 Ga0070709_10073409
167 JGI25406J46586_10068732
168 Ga0070683_100123865
169 Ga0070677_10188471
170 Ga0068869_100343755
171 Ga0070669_100093081
172 Ga0070714_100009971
173 Ga0070714_101370917
174 Ga0070710_10269902
175 Ga0070705_100036987
176 Ga0070700_100410272
177 Ga0070679_100118129
178 Ga0068855_100214003
179 Ga0068852_100062097
180 Ga0068859_100386513
181 Ga0068870_10159792
182 Ga0068863_100256902
183 Ga0068860_100787790
184 Ga0081455_10000172
185 Ga0081539_10001061
186 Ga0081539_10027393
187 Ga0081539_10028200
188 Ga0075364_10011907
189 Ga0075370_10027263
190 Ga0075428_100821227
191 Ga0075431_100019297
192 Ga0097620_100386524
193 Ga0105240_10138885
194 Ga0105240_10583953
195 Ga0105243_10283291
196 Ga0105239_10351871
197 Ga0157373_10184298
198 Ga0157370_10050290
199 Ga0157369_10027091
200 Ga0163163_11368583
201 Ga0206354_10579342
202 Ga0206353_10932945
203 Ga0224712_10000705
204 Ga0207692_10347246
205 Ga0207699_10064283
206 Ga0207645_10302337
207 Ga0207643_10311451
208 Ga0207695_10074906
209 Ga0207660_10573360
210 Ga0207652_10043590
211 Ga0207681_10083255
212 Ga0207700_10009915
213 Ga0207664_10021591
214 Ga0207689_10192670
215 Ga0207689_10426460
216 Ga0207661_10114156
217 Ga0207668_10009523
218 Ga0207658_10159203
219 Ga0207708_10390912
220 Ga0207641_10112884
221 Ga0207674_10031540
222 Ga0207683_10444609
223 Ga0207698_10139881
224 Ga0268266_10211956
225 Ga0268264_10185838
226 Ga0265334_10003045
227 Ga0314311_1235796
228 Ga0307513_10000040
229 Ga0307413_10060435
230 Ga0307410_10000766
231 Ga0307406_10005025
232 Ga0307407_10004178
233 Ga0307412_10301691
234 Ga0307409_100000183
235 Ga0307409_100058887
236 Ga0307409_100495704
237 Ga0307409_100547859
238 Ga0307416_100000124
239 Ga0307414_10023402
240 Ga0307411_10392711
241 Ga0307415_100167883
242 Ga0307507_10000361
243 Ga0373934_0107117
244 Ga0373940_0033929
245 Ga0373932_0033337
246 Ga0373942_0000208
247 Ga0373937_0952505
248 Ga0395898_0489409
249 Ga0395898_1058961
250 Ga0395901_0008021
251 Ga0395901_0097683
252 Ga0436360_0559612
253 Ga0436361_0413455
254 Ga0436363_0524568
255 Ga0439436_0007533
256 Ga0439439_0000447
257 Ga0439466_0010198
258 Ga0451793_1583573
259 Ga0439449_0000558
260 Ga0439457_000689
261 Ga0450906_009101
262 Ga0450907_058914
263 Ga0466969_0021103
264 Ga0466969_0036792
265 Ga0466961_0038786
266 Ga0466961_0041546
267 Ga0466963_0094162
268 Ga0466970_0320667
269 Ga0466957_0207862
270 Ga0466957_0356335
271 Ga0466960_0009290
272 Ga0466960_0172735
273 Ga0466960_0591026
274 Ga0466959_0005311
275 Ga0466958_0048849
276 Ga0466967_0047998
277 Ga0466967_0377037
278 Ga0466967_1789600
279 Ga0495653_0015519
280 Ga0495580_0013308
281 Ga0495664_0017944
282 Ga0495608_0001296
283 Ga0495652_0135276
284 Ga0495665_0026573
285 Ga0495640_0010993
286 Ga0495586_0126187
287 Ga0495645_0002226
288 Ga0495667_0010176
289 Ga0495635_0354288
290 Ga0495657_0030245
291 Ga0495613_0078647
292 Ga0495581_0003570
293 Ga0495604_0441757
294 Ga0496118_0142796
295 Ga0496123_0034356
296 Ga0496126_0395937
297 Ga0496126_0483893
298 Ga0501031_0106271
299 Ga0501036_0083577
300 Ga0501040_0098580
301 Ga0501047_0022177
302 Ga0501048_0184272
303 Ga0501070_0085246
304 Ga0501071_0191575
305 Ga0501076_0063398
306 Ga0501045_0528494
307 nmdc:mga00v17_1153_c1
308 nmdc:mga07m45_58763_c1
309 nmdc:mga05p37_329065_c1
310 nmdc:mga09592_421089_c1
311 Ga0495612_0271220
312 Ga0495619_0035318
313 Ga0495619_0051957
314 Ga0500630_172278
315 Ga0501082_0011202
316 2644083275
317 2644456870
318 2644527145
319 2644666441
320 2644670126
321 2729904853
322 2857480269
323 2857634491
324 2861520853
325 2870802595
326 2870804675
327 2887446455
328 2891403670
329 2891556083
330 2935890967

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01230

HIT

HIT domain

66

163

0.94

PF04677

CwfJ_C_1

Protein similar to CwfJ C-terminus 1

44

136

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6af2-assembly1.cif.gz_A crystal structure of n-terminus deletion mutant of mycobacterium avium diadenosine 5',5'''-p1,p4-tetraphosphate phosphorylase 0.8796 51 182
6af2-assembly1.cif.gz_C crystal structure of n-terminus deletion mutant of mycobacterium avium diadenosine 5',5'''-p1,p4-tetraphosphate phosphorylase 0.8536 46 182
6af2-assembly1.cif.gz_B-2 crystal structure of n-terminus deletion mutant of mycobacterium avium diadenosine 5',5'''-p1,p4-tetraphosphate phosphorylase 0.8478 45 182
6af2-assembly1.cif.gz_B-2 crystal structure of n-terminus deletion mutant of mycobacterium avium diadenosine 5',5'''-p1,p4-tetraphosphate phosphorylase 0.8249 45 182
6af2-assembly1.cif.gz_C crystal structure of n-terminus deletion mutant of mycobacterium avium diadenosine 5',5'''-p1,p4-tetraphosphate phosphorylase 0.8242 46 182
ID Description Score Start End Superfamily
af_Q0IQH7_1_86_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.8721 80 154 3.30.428.10
af_A0A140LH01_2_105_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.8539 57 148 3.30.428.10
af_K7V294_160_291_1.10.238.10 Mainly Alpha;Orthogonal Bundle;Recoverin; domain 1;EF-hand 0.8203 92 116 1.10.238.10
2fhiA00 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.8181 53 182 3.30.428.10
1emsB02 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.8177 59 181 3.30.428.10
ID Description Score Start End GO Terms
AF-D8MBP9-F1-model_v4 HIT domain-containing protein 0.8968 59 147 GO:0003824
AF-A0A397FYR1-F1-model_v4 Bis(5'-adenosyl)-triphosphatase (EC 3.6.1.29) 0.8946 59 154 GO:0000166
GO:0047710
AF-A0A1D7VY78-F1-model_v4 HIT domain-containing protein 0.8918 62 154 GO:0003824
AF-A0A434TNX9-F1-model_v4 HIT family protein 0.8887 59 154 GO:0003824
AF-A0A7K4B9C4-F1-model_v4 HIT family protein 0.887 45 154 GO:0003824

Map