F244121

General Info

Members Datasets Scaffolds Average Seq Length
164 120 164 269

Family's Representative Sequence

Representative Sequence 3300026142|Ga0207698_10106628|Ga0207698_101066283
Length 322
Sequence MSAERGSPTDFLQYLSSGCIGSPRSRNAHTSVYVVLEEIAADKWRGVAHNRSTMSSLFDLSGEVAVVIGATGVLGGGLADGLGAAGAKVAVVGRNQERGEARAKVISEAGGTAKFFSADASDRASVAKAREAISAEFGGATILVNAAGGNDPKVTVTAERNFESIVADDWRAAFDLNLVGGALIPCQEFGPAMCAAGKGSIINIASVSAHLPLSRVVAYSSAKAAVLNLTQFLAREWASKGVRVNSITPGFFPAEQNRKLLFNDDGSPTARTQSIWGHTPMNRFGQAEELIGACVFLASPKAASFVTGIDLRVDGGFLSQTI

Samples

Sample ID Description Type Environment
1 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
50 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
69 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
72 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
79 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
80 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
81 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
82 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
83 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
84 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
85 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
86 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
87 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
88 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
89 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
90 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
93 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
94 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
95 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
96 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
97 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
98 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
99 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
100 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
101 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
102 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
103 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
104 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
108 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
109 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
110 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
111 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
112 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
113 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
114 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
115 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
116 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
117 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
118 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
119 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
120 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.76
Nodule 0
Rhizoplane 0.61
Rhizosphere 85.37
Stem 0
Stem Tuber 0
Unclassified 4.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24033J26618_1000256 3300002155 Bacteria 5881
2 rootH2_10021974 3300003320 Bacteria 4188
3 rootH2_10076077 3300003320 Bacteria 7214
4 Ga0055530_10044163 3300003791 Bacteria 1070
5 Ga0065707_10000780 3300005295 Bacteria 15111
6 Ga0070658_10004141 3300005327 Bacteria 11877
7 Ga0070658_10103152 3300005327 Bacteria 2359
8 Ga0070658_10176433 3300005327 Bacteria 1797
9 Ga0070660_100161772 3300005339 Bacteria 1804
10 Ga0070689_100025604 3300005340 Bacteria 4434
11 Ga0070689_100028234 3300005340 Bacteria 4239
12 Ga0070689_100044772 3300005340 Bacteria 3405
13 Ga0070691_10141012 3300005341 Bacteria 1228
14 Ga0070661_100001219 3300005344 Bacteria 18107
15 Ga0070668_100247698 3300005347 Unclassified 1478
16 Ga0070675_100025481 3300005354 Bacteria 4741
17 Ga0070671_100577619 3300005355 Unclassified 970
18 Ga0070667_100211174 3300005367 Unclassified 1725
19 Ga0070700_100150909 3300005441 Unclassified 1589
20 Ga0070685_10042317 3300005466 Bacteria 2599
21 Ga0070698_100007965 3300005471 Bacteria 11461
22 Ga0070699_100032154 3300005518 Bacteria 4530
23 Ga0070684_100162729 3300005535 Bacteria 2025
24 Ga0070697_100494310 3300005536 Bacteria 1069
25 Ga0070697_100599992 3300005536 Unclassified 968
26 Ga0068853_100000075 3300005539 Bacteria 68972
27 Ga0070686_100017926 3300005544 Bacteria 4146
28 Ga0068855_100019795 3300005563 Bacteria 8085
29 Ga0068855_100354878 3300005563 Bacteria 1615
30 Ga0068856_100000329 3300005614 Bacteria 52134
31 Ga0068856_100203673 3300005614 Unclassified 1993
32 Ga0068856_100371013 3300005614 Bacteria 1450
33 Ga0068859_100016309 3300005617 Bacteria 7463
34 Ga0068859_100706690 3300005617 Bacteria 1099
35 Ga0068863_100512193 3300005841 Unclassified 1182
36 Ga0068863_100687629 3300005841 Unclassified 1016
37 Ga0068858_100076280 3300005842 Bacteria 3113
38 Ga0068860_100000306 3300005843 Bacteria 67958
39 Ga0068862_100134870 3300005844 Unclassified 2187
40 Ga0070717_10068922 3300006028 Bacteria 2944
41 Ga0075368_10127902 3300006042 Bacteria 1055
42 Ga0075363_100011076 3300006048 Bacteria 4307
43 Ga0075364_10083422 3300006051 Bacteria 2115
44 Ga0075367_10105458 3300006178 Bacteria 1726
45 Ga0075366_10004465 3300006195 Bacteria 7509
46 Ga0075370_10051284 3300006353 Bacteria 2340
47 Ga0097620_100016309 3300006931 Bacteria 7463
48 Ga0097620_100706701 3300006931 Bacteria 1099
49 Ga0111539_10116303 3300009094 Bacteria 3136
50 Ga0111539_10591576 3300009094 Unclassified 1292
51 Ga0105238_10041942 3300009551 Bacteria 4635
52 Ga0105249_10559859 3300009553 Bacteria 1195
53 Ga0105246_10301216 3300011119 Unclassified 1294
54 Ga0157370_10071372 3300013104 Bacteria 3276
55 Ga0157374_10122627 3300013296 Bacteria 2510
56 Ga0157378_10001993 3300013297 Bacteria 18249
57 Ga0157378_10403316 3300013297 Bacteria 1348
58 Ga0163162_10678212 3300013306 Bacteria 1153
59 Ga0157372_10049716 3300013307 Bacteria 4663
60 Ga0157372_10744388 3300013307 Unclassified 1140
61 Ga0157375_10000129 3300013308 Bacteria 75013
62 Ga0157375_10094417 3300013308 Bacteria 3060
63 Ga0157375_10722740 3300013308 Bacteria 1148
64 Ga0163163_10000014 3300014325 Bacteria 231615
65 Ga0163163_10809871 3300014325 Unclassified 1000
66 Ga0157376_10503460 3300014969 Unclassified 1191
67 Ga0213872_10016746 3300021361 Bacteria 3399
68 Ga0213872_10035827 3300021361 Unclassified 2269
69 Ga0213876_10227140 3300021384 Unclassified 992
70 Ga0209050_1000918 3300025298 Bacteria 38787
71 Ga0207671_10032757 3300025914 Bacteria 3866
72 Ga0207671_10217154 3300025914 Bacteria 1497
73 Ga0207649_10000940 3300025920 Bacteria 18212
74 Ga0207646_10027959 3300025922 Bacteria 5140
75 Ga0207659_10088839 3300025926 Bacteria 2303
76 Ga0207644_10505367 3300025931 Unclassified 997
77 Ga0207670_10006963 3300025936 Bacteria 6293
78 Ga0207670_10045098 3300025936 Bacteria 2921
79 Ga0207670_10058150 3300025936 Bacteria 2626
80 Ga0207667_10078640 3300025949 Bacteria 3418
81 Ga0207667_10542457 3300025949 Bacteria 1177
82 Ga0207668_10242833 3300025972 Bacteria 1458
83 Ga0207658_10206968 3300025986 Bacteria 1642
84 Ga0207703_10029298 3300026035 Bacteria 4342
85 Ga0207703_10062119 3300026035 Unclassified 3060
86 Ga0207639_10000012 3300026041 Bacteria 344067
87 Ga0207702_10001841 3300026078 Bacteria 20876
88 Ga0207702_10007564 3300026078 Bacteria 9255
89 Ga0207702_10233107 3300026078 Unclassified 1721
90 Ga0207702_10291294 3300026078 Bacteria 1547
91 Ga0207641_10498239 3300026088 Unclassified 1182
92 Ga0207698_10106628 3300026142 Bacteria 2337
93 Ga0268265_10480082 3300028380 Unclassified 1167
94 Ga0268264_10000289 3300028381 Bacteria 84632
95 Ga0268264_10197964 3300028381 Bacteria 1836
96 Ga0265319_1023810 3300028563 Bacteria 2213
97 Ga0265336_10070738 3300028666 Bacteria 1043
98 Ga0265338_10001631 3300028800 Bacteria 35890
99 Ga0265338_10008846 3300028800 Bacteria 12151
100 Ga0265338_10015674 3300028800 Bacteria 8305
101 Ga0265338_10067491 3300028800 Bacteria 3089
102 Ga0265338_10106880 3300028800 Bacteria 2264
103 Ga0265324_10000590 3300029957 Bacteria 24867
104 Ga0265324_10035660 3300029957 Bacteria 1732
105 Ga0265339_10041316 3300031249 Bacteria 2561
106 Ga0265327_10063733 3300031251 Bacteria 1870
107 Ga0265316_10046796 3300031344 Bacteria 3425
108 Ga0265314_10031926 3300031711 Bacteria 3881
109 Ga0307412_10108933 3300031911 Unclassified 1974
110 Ga0307416_100015706 3300032002 Bacteria 5238
111 Ga0373930_0000120 3300034816 Bacteria 8459
112 Ga0373928_0000147 3300035084 Bacteria 13500
113 Ga0373929_0002276 3300035085 Bacteria 3544
114 Ga0373944_0000027 3300035089 Bacteria 24967
115 Ga0373949_0002076 3300035090 Bacteria 5286
116 Ga0373951_0003478 3300035091 Bacteria 3808
117 Ga0373932_0000001 3300035112 Bacteria 1459067
118 Ga0373962_0000327 3300035242 Bacteria 10371
119 Ga0373931_0000002 3300035691 Bacteria 599830
120 Ga0373935_0315864 3300035692 Unclassified 1107
121 Ga0373927_0004762 3300035695 Bacteria 9446
122 Ga0373927_0051348 3300035695 Unclassified 2666
123 Ga0373947_0050248 3300035725 Bacteria 2507
124 Ga0373925_0000588 3300037068 Bacteria 35106
125 Ga0373925_0019900 3300037068 Bacteria 4883
126 Ga0395901_0197033 3300038443 Bacteria 2112
127 Ga0436365_0763715 3300039437 Bacteria 1527
128 Ga0436365_0800045 3300039437 Bacteria 2112
129 Ga0436365_1269192 3300039437 Bacteria 3209
130 Ga0436361_0472091 3300039447 Bacteria 3995
131 Ga0436362_0155717 3300039453 Unclassified 1696
132 Ga0436362_0558863 3300039453 Bacteria 2979
133 Ga0436362_1019975 3300039453 Unclassified 1358
134 Ga0451807_2661914 3300041486 Bacteria 1122
135 Ga0451577_0095460 3300042876 Bacteria 2655
136 Ga0451577_0141431 3300042876 Unclassified 2163
137 Ga0451577_0394648 3300042876 Bacteria 1256
138 Ga0453684_0000093 3300044712 Bacteria 384050
139 Ga0453684_0075864 3300044712 Bacteria 4223
140 Ga0451576_0211771 3300045051 Bacteria 2024
141 Ga0495643_0000348 3300046522 Bacteria 62745
142 Ga0495658_0043825 3300046683 Bacteria 2504
143 Ga0495674_0609267 3300047319 Bacteria 864
144 Ga0495684_0403402 3300047471 Bacteria 959
145 Ga0496121_0248491 3300048924 Bacteria 1235
146 Ga0501032_0001135 3300049569 Bacteria 21313
147 Ga0501033_0000006 3300049570 Bacteria 348953
148 Ga0501034_0414911 3300049571 Bacteria 1268
149 Ga0501075_0099989 3300049591 Bacteria 2203
150 Ga0501080_0277685 3300049742 Bacteria 1523
151 Ga0501080_0682243 3300049742 Bacteria 907
152 Ga0501035_0142974 3300049822 Unclassified 2079
153 nmdc:mga06z11_17882_c1 3300050494 Bacteria 3228
154 nmdc:mga04h51_4485_c1 3300050495 Bacteria 3478
155 nmdc:mga07m45_12914_c1 3300050496 Bacteria 4419
156 nmdc:mga08y16_227182_c1 3300050511 Bacteria 1931
157 Ga0500650_0018332 3300053098 Bacteria 3034
158 Ga0500555_000029 3300053103 Bacteria 103966
159 Ga0500555_015222 3300053103 Bacteria 2219
160 Ga0500556_0011541 3300053104 Bacteria 2618
161 Ga0500616_0005904 3300053153 Bacteria 8188
162 Ga0501084_0575209 3300054114 Bacteria 952
163 Ga0501082_0205630 3300060353 Bacteria 1713
164 Ga0530510_0142461 3300061734 Bacteria 1767

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042876 Ga0451577_0141431 Ga0451577_0141431_1175_1984 233
2 3300028800 Ga0265338_10106880 Ga0265338_101068802 234
3 3300013308 Ga0157375_10722740 Ga0157375_107227401 243
4 3300061734 Ga0530510_0142461 Ga0530510_0142461_1016_1756 245
5 3300014969 Ga0157376_10503460 Ga0157376_105034601 250
6 3300005295 Ga0065707_10000780 Ga0065707_100007807 256
7 3300032002 Ga0307416_100015706 Ga0307416_1000157066 256
8 3300049591 Ga0501075_0099989 Ga0501075_0099989_77_874 256
9 3300049742 Ga0501080_0682243 Ga0501080_0682243_59_838 256
10 3300054114 Ga0501084_0575209 Ga0501084_0575209_58_855 256
11 3300060353 Ga0501082_0205630 Ga0501082_0205630_848_1645 256
12 3300034816 Ga0373930_0000120 Ga0373930_0000120_1022_1837 258
13 3300035084 Ga0373928_0000147 Ga0373928_0000147_4702_5517 258
14 3300035085 Ga0373929_0002276 Ga0373929_0002276_1663_2478 258
15 3300035089 Ga0373944_0000027 Ga0373944_0000027_11440_12255 258
16 3300035090 Ga0373949_0002076 Ga0373949_0002076_3191_4006 258
17 3300035091 Ga0373951_0003478 Ga0373951_0003478_1822_2637 258
18 3300035112 Ga0373932_0000001 Ga0373932_0000001_1112542_1113357 258
19 3300035242 Ga0373962_0000327 Ga0373962_0000327_7715_8530 258
20 3300035691 Ga0373931_0000002 Ga0373931_0000002_382041_382856 258
21 3300035695 Ga0373927_0051348 Ga0373927_0051348_1798_2613 258
22 3300035725 Ga0373947_0050248 Ga0373947_0050248_760_1575 258
23 3300037068 Ga0373925_0000588 Ga0373925_0000588_20245_21060 258
24 3300028381 Ga0268264_10197964 Ga0268264_101979643 259
25 3300025936 Ga0207670_10006963 Ga0207670_100069634 267
26 3300045051 Ga0451576_0211771 Ga0451576_0211771_1058_1861 267
27 3300005327 Ga0070658_10103152 Ga0070658_101031523 268
28 3300005340 Ga0070689_100025604 Ga0070689_1000256042 268
29 3300005340 Ga0070689_100044772 Ga0070689_1000447721 268
30 3300005441 Ga0070700_100150909 Ga0070700_1001509091 268
31 3300005466 Ga0070685_10042317 Ga0070685_100423172 268
32 3300005471 Ga0070698_100007965 Ga0070698_1000079658 268
33 3300005518 Ga0070699_100032154 Ga0070699_1000321544 268
34 3300005536 Ga0070697_100494310 Ga0070697_1004943101 268
35 3300005544 Ga0070686_100017926 Ga0070686_1000179264 268
36 3300005617 Ga0068859_100706690 Ga0068859_1007066901 268
37 3300005841 Ga0068863_100687629 Ga0068863_1006876291 268
38 3300005842 Ga0068858_100076280 Ga0068858_1000762804 268
39 3300005843 Ga0068860_100000306 Ga0068860_10000030620 268
40 3300006028 Ga0070717_10068922 Ga0070717_100689223 268
41 3300006931 Ga0097620_100706701 Ga0097620_1007067011 268
42 3300009094 Ga0111539_10116303 Ga0111539_101163032 268
43 3300011119 Ga0105246_10301216 Ga0105246_103012162 268
44 3300013297 Ga0157378_10403316 Ga0157378_104033162 268
45 3300013307 Ga0157372_10744388 Ga0157372_107443881 268
46 3300013308 Ga0157375_10000129 Ga0157375_1000012917 268
47 3300014325 Ga0163163_10000014 Ga0163163_1000001445 268
48 3300014325 Ga0163163_10809871 Ga0163163_108098711 268
49 3300021384 Ga0213876_10227140 Ga0213876_102271401 268
50 3300025922 Ga0207646_10027959 Ga0207646_100279595 268
51 3300028381 Ga0268264_10000289 Ga0268264_1000028945 268
52 3300028800 Ga0265338_10001631 Ga0265338_100016319 268
53 3300028800 Ga0265338_10067491 Ga0265338_100674913 268
54 3300029957 Ga0265324_10000590 Ga0265324_1000059014 268
55 3300031249 Ga0265339_10041316 Ga0265339_100413162 268
56 3300031251 Ga0265327_10063733 Ga0265327_100637332 268
57 3300031911 Ga0307412_10108933 Ga0307412_101089332 268
58 3300039437 Ga0436365_0800045 Ga0436365_0800045_249_1055 268
59 3300039453 Ga0436362_0155717 Ga0436362_0155717_550_1356 268
60 3300041486 Ga0451807_2661914 Ga0451807_2661914_48_854 268
61 3300042876 Ga0451577_0394648 Ga0451577_0394648_299_1105 268
62 3300044712 Ga0453684_0075864 Ga0453684_0075864_2254_3060 268
63 3300046683 Ga0495658_0043825 Ga0495658_0043825_1467_2273 268
64 3300047319 Ga0495674_0609267 Ga0495674_0609267_47_853 268
65 3300047471 Ga0495684_0403402 Ga0495684_0403402_113_919 268
66 3300050511 nmdc:mga08y16_227182_c1 nmdc:mga08y16_227182_c1_103_909 268
67 3300053103 Ga0500555_000029 Ga0500555_000029_39473_40279 268
68 3300003320 rootH2_10076077 rootH2_100760773 269
69 3300005327 Ga0070658_10004141 Ga0070658_100041412 269
70 3300025914 Ga0207671_10032757 Ga0207671_100327575 269
71 3300025914 Ga0207671_10217154 Ga0207671_102171542 269
72 3300026035 Ga0207703_10029298 Ga0207703_100292986 269
73 3300026035 Ga0207703_10062119 Ga0207703_100621192 269
74 3300028800 Ga0265338_10015674 Ga0265338_100156747 269
75 3300039437 Ga0436365_0763715 Ga0436365_0763715_650_1459 269
76 3300042876 Ga0451577_0095460 Ga0451577_0095460_1188_1997 269
77 3300044712 Ga0453684_0000093 Ga0453684_0000093_157376_158185 269
78 3300048924 Ga0496121_0248491 Ga0496121_0248491_414_1223 269
79 3300049571 Ga0501034_0414911 Ga0501034_0414911_238_1047 269
80 3300053103 Ga0500555_015222 Ga0500555_015222_217_1026 269
81 3300002155 JGI24033J26618_1000256 JGI24033J26618_10002562 270
82 3300003320 rootH2_10021974 rootH2_100219742 270
83 3300003791 Ga0055530_10044163 Ga0055530_100441631 270
84 3300005327 Ga0070658_10176433 Ga0070658_101764332 270
85 3300005339 Ga0070660_100161772 Ga0070660_1001617722 270
86 3300005340 Ga0070689_100028234 Ga0070689_1000282345 270
87 3300005341 Ga0070691_10141012 Ga0070691_101410122 270
88 3300005344 Ga0070661_100001219 Ga0070661_1000012193 270
89 3300005347 Ga0070668_100247698 Ga0070668_1002476982 270
90 3300005354 Ga0070675_100025481 Ga0070675_1000254813 270
91 3300005355 Ga0070671_100577619 Ga0070671_1005776191 270
92 3300005367 Ga0070667_100211174 Ga0070667_1002111742 270
93 3300005535 Ga0070684_100162729 Ga0070684_1001627293 270
94 3300005536 Ga0070697_100599992 Ga0070697_1005999921 270
95 3300005539 Ga0068853_100000075 Ga0068853_1000000758 270
96 3300005563 Ga0068855_100019795 Ga0068855_1000197959 270
97 3300005563 Ga0068855_100354878 Ga0068855_1003548782 270
98 3300005614 Ga0068856_100000329 Ga0068856_1000003293 270
99 3300005614 Ga0068856_100203673 Ga0068856_1002036732 270
100 3300005614 Ga0068856_100371013 Ga0068856_1003710132 270
101 3300005617 Ga0068859_100016309 Ga0068859_1000163096 270
102 3300005841 Ga0068863_100512193 Ga0068863_1005121932 270
103 3300005844 Ga0068862_100134870 Ga0068862_1001348702 270
104 3300006042 Ga0075368_10127902 Ga0075368_101279022 270
105 3300006048 Ga0075363_100011076 Ga0075363_1000110762 270
106 3300006051 Ga0075364_10083422 Ga0075364_100834223 270
107 3300006178 Ga0075367_10105458 Ga0075367_101054582 270
108 3300006195 Ga0075366_10004465 Ga0075366_100044658 270
109 3300006353 Ga0075370_10051284 Ga0075370_100512842 270
110 3300006931 Ga0097620_100016309 Ga0097620_1000163096 270
111 3300009094 Ga0111539_10591576 Ga0111539_105915762 270
112 3300009551 Ga0105238_10041942 Ga0105238_100419421 270
113 3300009553 Ga0105249_10559859 Ga0105249_105598591 270
114 3300013104 Ga0157370_10071372 Ga0157370_100713723 270
115 3300013296 Ga0157374_10122627 Ga0157374_101226272 270
116 3300013297 Ga0157378_10001993 Ga0157378_1000199313 270
117 3300013306 Ga0163162_10678212 Ga0163162_106782121 270
118 3300013307 Ga0157372_10049716 Ga0157372_100497162 270
119 3300013308 Ga0157375_10094417 Ga0157375_100944173 270
120 3300021361 Ga0213872_10016746 Ga0213872_100167462 270
121 3300021361 Ga0213872_10035827 Ga0213872_100358272 270
122 3300025298 Ga0209050_1000918 Ga0209050_100091821 270
123 3300025920 Ga0207649_10000940 Ga0207649_100009403 270
124 3300025926 Ga0207659_10088839 Ga0207659_100888393 270
125 3300025931 Ga0207644_10505367 Ga0207644_105053671 270
126 3300025936 Ga0207670_10045098 Ga0207670_100450982 270
127 3300025936 Ga0207670_10058150 Ga0207670_100581502 270
128 3300025949 Ga0207667_10078640 Ga0207667_100786404 270
129 3300025949 Ga0207667_10542457 Ga0207667_105424572 270
130 3300025972 Ga0207668_10242833 Ga0207668_102428332 270
131 3300025986 Ga0207658_10206968 Ga0207658_102069683 270
132 3300026041 Ga0207639_10000012 Ga0207639_10000012182 270
133 3300026078 Ga0207702_10001841 Ga0207702_1000184119 270
134 3300026078 Ga0207702_10007564 Ga0207702_100075646 270
135 3300026078 Ga0207702_10233107 Ga0207702_102331072 270
136 3300026078 Ga0207702_10291294 Ga0207702_102912942 270
137 3300026088 Ga0207641_10498239 Ga0207641_104982392 270
138 3300026142 Ga0207698_10106628 Ga0207698_101066283 270
139 3300028380 Ga0268265_10480082 Ga0268265_104800822 270
140 3300028563 Ga0265319_1023810 Ga0265319_10238102 270
141 3300028666 Ga0265336_10070738 Ga0265336_100707381 270
142 3300028800 Ga0265338_10008846 Ga0265338_100088469 270
143 3300029957 Ga0265324_10035660 Ga0265324_100356602 270
144 3300031344 Ga0265316_10046796 Ga0265316_100467962 270
145 3300031711 Ga0265314_10031926 Ga0265314_100319263 270
146 3300035692 Ga0373935_0315864 Ga0373935_0315864_68_883 270
147 3300035695 Ga0373927_0004762 Ga0373927_0004762_3522_4337 270
148 3300037068 Ga0373925_0019900 Ga0373925_0019900_2074_2889 270
149 3300038443 Ga0395901_0197033 Ga0395901_0197033_77_895 270
150 3300039437 Ga0436365_1269192 Ga0436365_1269192_85_900 270
151 3300039447 Ga0436361_0472091 Ga0436361_0472091_1553_2368 270
152 3300039453 Ga0436362_0558863 Ga0436362_0558863_475_1287 270
153 3300039453 Ga0436362_1019975 Ga0436362_1019975_158_973 270
154 3300046522 Ga0495643_0000348 Ga0495643_0000348_42701_43513 270
155 3300049569 Ga0501032_0001135 Ga0501032_0001135_15432_16244 270
156 3300049570 Ga0501033_0000006 Ga0501033_0000006_295550_296362 270
157 3300049742 Ga0501080_0277685 Ga0501080_0277685_490_1308 270
158 3300049822 Ga0501035_0142974 Ga0501035_0142974_91_909 270
159 3300050494 nmdc:mga06z11_17882_c1 nmdc:mga06z11_17882_c1_589_1401 270
160 3300050495 nmdc:mga04h51_4485_c1 nmdc:mga04h51_4485_c1_274_1086 270
161 3300050496 nmdc:mga07m45_12914_c1 nmdc:mga07m45_12914_c1_2609_3421 270
162 3300053098 Ga0500650_0018332 Ga0500650_0018332_414_1229 270
163 3300053104 Ga0500556_0011541 Ga0500556_0011541_1539_2351 270
164 3300053153 Ga0500616_0005904 Ga0500616_0005904_1213_2025 270

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

63

264

0.96

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

69

318

0.9

PF08659

KR

KR domain

64

252

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
4nbv-assembly1.cif.gz_A crystal structure of fabg from cupriavidus taiwanensis 0.9535 7 264
3tfo-assembly1.cif.gz_D crystal structure of a putative 3-oxoacyl-(acyl-carrier-protein) reductase from sinorhizobium meliloti 0.9511 10 200
4ijk-assembly1.cif.gz_C crystal structure of a putative 3-oxoacyl-[acyl-carrier protein]reductase from helicobacter pylori 26695 0.9496 7 265
8jfa-assembly1.cif.gz_C crystal structure of 3-oxoacyl-acp reductase fabg in complex with nadph from helicobacter pylori 0.9494 7 265
3gaf-assembly1.cif.gz_A 2.2a crystal structure of 7-alpha-hydroxysteroid dehydrogenase from brucella melitensis 0.9492 6 264
ID Description Score Start End Superfamily
af_P0AET8_1_255_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9493 1 264 3.40.50.720
4iinB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9457 11 265 3.40.50.720
3ftpC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.945 8 265 3.40.50.720
4hsyA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9424 8 266 3.40.50.720
4iboB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9424 3 267 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A382Y6E4-F1-model_v4 D-mannonate oxidoreductase 0.9914 3 202 GO:0016616
AF-A0A3D1IPG1-F1-model_v4 D-mannonate oxidoreductase 0.9885 3 159
AF-A0A382Y6E4-F1-model_v4 D-mannonate oxidoreductase 0.9865 3 202 GO:0016616
AF-A0A3D1IPG1-F1-model_v4 D-mannonate oxidoreductase 0.9823 3 159
AF-A0A7V4H189-F1-model_v4 SDR family oxidoreductase 0.9767 3 261 GO:0016616

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pLDDT pTM Quality
92.84 0.91 High
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Predicted Structure (AlphaFold2)

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