F243234
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 164 | 104 | 328 | 811 |
Family's Representative Sequence
| Representative Sequence | 3300005367|Ga0070667_100002816|Ga0070667_1000028164 |
| Length | 852 |
| Sequence | MFEVMSDRPTGAAPARLVAVLGPTNTGKTHLAVERMLGHASGMIGLPLRLLAREIYDRIVKVRGERAVALITGEEKIVPPRPHYYVCTVEAMPLSREVEFLAVDEIQLCADPERGHVFTHRLLHARGTAETMLLGAASMAPLVRRLLPQAEIVSRERFSVLSYSGSKKLTRLPRRTAVVAFSADQVYAIAELIRRQRGGAAVVMGSLSPRTRNAQVELYQSGEVDFLVATDAIGMGLNMDVDHVAFAGLRKFDGKRMRWLRPAEVGQIAGRAGRFRRDGTFGVTGDCDELDHDVVEAVEAHRYEPVEACEWRNPRLDFGSLSLLMRSLAAPPDRAGLKLSEESLDETTLRALAAIPLVADRARDRSALLRLWDVCQTPDFRKTGLDDHLRLIREFFEALTGRAGRIPPEWIAGQFAGLDRLDGDIDALSARLASVRTLAYVTNRPDWLADAAGWQGRTRALEDRLSDTLHERLMARFVDRRTSALMRGLRVREDMLAGVAADGAVTVEGHYVGRLQAAAFEPARGATLLEEKALRAAAVAAVGPEIARRLGRLAAEADEAFALSPDGTVLWRGEAAGAISGGGPFHPRVRLYGDLGPSAARERAARRLEAFVAAEAGRRLAPLRALDVAMSEGRLKGLARGLAYRLSEAGGVLDRAQVRAEARALSQVERRALKALGVRLGAFSLYLPALLRPDAAALLRIFAIRETPHWRPAADGPSPLPHSRPPPAALAAFGLRAVGRLAVPVEQLERLDALMRSAVRRADGIVLSDQAREELGWSEADALAILRGLGFLNMAKAGEPAVWRRRGERTDTSGRAETPPAASPFAALASLKPAAAPVRRRRPRRRSKQVRT |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 3 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 4 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 5 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 6 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 7 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 9 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 13 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 15 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 16 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 17 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 18 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 19 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 20 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 21 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 22 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 26 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 27 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 30 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 31 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 32 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 33 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 34 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 35 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 53 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 54 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 55 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 56 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 57 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 58 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 59 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 60 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 61 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 62 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 63 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 64 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 65 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 66 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 67 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 68 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 69 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 70 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 71 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 84 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 85 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 86 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 87 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 88 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 89 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 90 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 91 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 92 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 93 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 94 | 2643221552 | Caulobacter sp. Root1472 | Isolate | Unclassified |
| 95 | 2643221574 | Brevundimonas sp. Root608 | Isolate | Unclassified |
| 96 | 2643221598 | Phenylobacterium sp. Root700 | Isolate | Unclassified |
| 97 | 2643221614 | Phenylobacterium sp. Root77 | Isolate | Unclassified |
| 98 | 2643221661 | Phenylobacterium sp. Root1277 | Isolate | Unclassified |
| 99 | 2643221663 | Brevundimonas sp. Root1279 | Isolate | Unclassified |
| 100 | 2643221666 | Phenylobacterium sp. Root1290 | Isolate | Unclassified |
| 101 | 2643221699 | Brevundimonas sp. Root1423 | Isolate | Unclassified |
| 102 | 2928972540 | Brevundimonas sp. 1080 | Isolate | Rhizosphere |
| 103 | 2941485952 | Brevundimonas faecalis 2814 | Isolate | Rhizosphere |
| 104 | 2977240413 | Brevundimonas vesicularis SORGH_AS 431 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 92.07 |
| Metatranscriptomes | 0.61 |
| Isolates | 7.32 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 7.93 |
| Nodule | 0 |
| Rhizoplane | 1.22 |
| Rhizosphere | 75 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070667_100002816 | 3300005367 | Bacteria | 15004 |
| 2 | Ga0006562J51391_1068546 | 3300003578 | Bacteria | 5680 |
| 3 | Ga0055536_1000484 | 3300003781 | Bacteria | 27706 |
| 4 | Ga0055530_10001367 | 3300003791 | Bacteria | 18079 |
| 5 | Ga0055531_10008761 | 3300003794 | Bacteria | 5278 |
| 6 | Ga0065165_1000542 | 3300005262 | Bacteria | 57140 |
| 7 | Ga0070670_100000044 | 3300005331 | Bacteria | 140263 |
| 8 | Ga0068869_100024274 | 3300005334 | Bacteria | 4199 |
| 9 | Ga0070668_100000098 | 3300005347 | Bacteria | 53574 |
| 10 | Ga0070671_100009271 | 3300005355 | Bacteria | 7906 |
| 11 | Ga0070659_100004793 | 3300005366 | Bacteria | 9668 |
| 12 | Ga0070667_100000356 | 3300005367 | Bacteria | 50241 |
| 13 | Ga0070667_100006944 | 3300005367 | Bacteria | 9407 |
| 14 | Ga0070667_100015549 | 3300005367 | Bacteria | 6291 |
| 15 | Ga0070681_10016591 | 3300005458 | Bacteria | 7354 |
| 16 | Ga0070665_100000144 | 3300005548 | Bacteria | 132302 |
| 17 | Ga0070665_100000762 | 3300005548 | Bacteria | 42638 |
| 18 | Ga0070665_100027501 | 3300005548 | Bacteria | 5729 |
| 19 | Ga0068855_100079277 | 3300005563 | Bacteria | 3809 |
| 20 | Ga0068859_100001088 | 3300005617 | Bacteria | 27740 |
| 21 | Ga0068864_100000060 | 3300005618 | Bacteria | 124506 |
| 22 | Ga0068864_100000061 | 3300005618 | Bacteria | 123373 |
| 23 | Ga0068863_100000023 | 3300005841 | Bacteria | 186490 |
| 24 | Ga0068863_100002498 | 3300005841 | Bacteria | 18291 |
| 25 | Ga0068863_100006335 | 3300005841 | Bacteria | 11605 |
| 26 | Ga0068858_100000363 | 3300005842 | Bacteria | 47852 |
| 27 | Ga0068858_100001420 | 3300005842 | Bacteria | 24630 |
| 28 | Ga0068858_100024192 | 3300005842 | Bacteria | 5660 |
| 29 | Ga0068860_100000115 | 3300005843 | Bacteria | 128506 |
| 30 | Ga0068860_100000122 | 3300005843 | Bacteria | 125178 |
| 31 | Ga0068860_100012676 | 3300005843 | Bacteria | 8293 |
| 32 | Ga0068860_100019462 | 3300005843 | Bacteria | 6582 |
| 33 | Ga0068862_100001272 | 3300005844 | Bacteria | 23685 |
| 34 | Ga0068862_100008719 | 3300005844 | Bacteria | 8393 |
| 35 | Ga0068862_100046692 | 3300005844 | Bacteria | 3694 |
| 36 | Ga0097620_100001088 | 3300006931 | Bacteria | 27740 |
| 37 | Ga0105240_10001080 | 3300009093 | Bacteria | 48123 |
| 38 | Ga0105240_10001863 | 3300009093 | Bacteria | 35182 |
| 39 | Ga0105240_10013562 | 3300009093 | Bacteria | 11185 |
| 40 | Ga0105248_10001990 | 3300009177 | Bacteria | 22723 |
| 41 | Ga0105248_10007703 | 3300009177 | Bacteria | 11833 |
| 42 | Ga0105248_10019992 | 3300009177 | Bacteria | 7414 |
| 43 | Ga0105248_10048096 | 3300009177 | Bacteria | 4784 |
| 44 | Ga0105249_10000478 | 3300009553 | Bacteria | 37253 |
| 45 | Ga0157373_10003642 | 3300013100 | Bacteria | 11642 |
| 46 | Ga0157369_10035316 | 3300013105 | Bacteria | 5483 |
| 47 | Ga0163163_10011534 | 3300014325 | Bacteria | 8026 |
| 48 | Ga0163163_10058261 | 3300014325 | Bacteria | 3819 |
| 49 | Ga0157379_10000663 | 3300014968 | Bacteria | 27864 |
| 50 | Ga0213872_10005785 | 3300021361 | Bacteria | 6283 |
| 51 | Ga0213876_10015113 | 3300021384 | Bacteria | 4091 |
| 52 | Ga0209676_1000038 | 3300025292 | Bacteria | 449305 |
| 53 | Ga0209676_1001282 | 3300025292 | Bacteria | 25969 |
| 54 | Ga0209758_1002333 | 3300025297 | Bacteria | 19589 |
| 55 | Ga0209050_1000639 | 3300025298 | Bacteria | 54216 |
| 56 | Ga0209257_1000060 | 3300025304 | Bacteria | 372267 |
| 57 | Ga0209257_1000540 | 3300025304 | Bacteria | 64961 |
| 58 | Ga0207695_10015986 | 3300025913 | Bacteria | 8808 |
| 59 | Ga0207695_10018255 | 3300025913 | Bacteria | 8117 |
| 60 | Ga0207695_10071965 | 3300025913 | Bacteria | 3530 |
| 61 | Ga0207657_10003177 | 3300025919 | Bacteria | 17574 |
| 62 | Ga0207681_10037552 | 3300025923 | Bacteria | 3202 |
| 63 | Ga0207650_10000065 | 3300025925 | Bacteria | 140452 |
| 64 | Ga0207690_10003203 | 3300025932 | Bacteria | 9822 |
| 65 | Ga0207704_10013159 | 3300025938 | Bacteria | 4133 |
| 66 | Ga0207711_10001692 | 3300025941 | Bacteria | 20298 |
| 67 | Ga0207711_10007667 | 3300025941 | Bacteria | 9023 |
| 68 | Ga0207711_10014420 | 3300025941 | Bacteria | 6564 |
| 69 | Ga0207667_10025769 | 3300025949 | Bacteria | 6433 |
| 70 | Ga0207667_10027678 | 3300025949 | Bacteria | 6166 |
| 71 | Ga0207712_10000625 | 3300025961 | Bacteria | 27973 |
| 72 | Ga0207668_10000018 | 3300025972 | Bacteria | 158577 |
| 73 | Ga0207668_10000243 | 3300025972 | Bacteria | 36618 |
| 74 | Ga0207668_10003734 | 3300025972 | Bacteria | 8959 |
| 75 | Ga0207658_10000168 | 3300025986 | Bacteria | 70040 |
| 76 | Ga0207658_10005254 | 3300025986 | Bacteria | 8908 |
| 77 | Ga0207658_10010450 | 3300025986 | Bacteria | 6305 |
| 78 | Ga0207703_10000373 | 3300026035 | Bacteria | 47832 |
| 79 | Ga0207703_10011534 | 3300026035 | Bacteria | 6875 |
| 80 | Ga0207641_10000067 | 3300026088 | Bacteria | 155379 |
| 81 | Ga0207641_10000709 | 3300026088 | Bacteria | 35735 |
| 82 | Ga0207641_10009728 | 3300026088 | Bacteria | 7918 |
| 83 | Ga0207676_10000062 | 3300026095 | Bacteria | 112045 |
| 84 | Ga0207676_10000243 | 3300026095 | Bacteria | 47468 |
| 85 | Ga0268266_10000003 | 3300028379 | Bacteria | 1701703 |
| 86 | Ga0268266_10001138 | 3300028379 | Bacteria | 33094 |
| 87 | Ga0268266_10001678 | 3300028379 | Bacteria | 25491 |
| 88 | Ga0268266_10015729 | 3300028379 | Bacteria | 6480 |
| 89 | Ga0268265_10000654 | 3300028380 | Bacteria | 34397 |
| 90 | Ga0268265_10001007 | 3300028380 | Bacteria | 25467 |
| 91 | Ga0268265_10004949 | 3300028380 | Bacteria | 9157 |
| 92 | Ga0268265_10035293 | 3300028380 | Bacteria | 3652 |
| 93 | Ga0268264_10000002 | 3300028381 | Bacteria | 1153045 |
| 94 | Ga0268264_10000172 | 3300028381 | Bacteria | 140393 |
| 95 | Ga0307517_10000705 | 3300028786 | Bacteria | 57524 |
| 96 | Ga0307517_10044428 | 3300028786 | Bacteria | 4699 |
| 97 | Ga0265338_10010262 | 3300028800 | Bacteria | 11024 |
| 98 | Ga0265338_10065070 | 3300028800 | Bacteria | 3166 |
| 99 | Ga0265327_10000740 | 3300031251 | Bacteria | 50953 |
| 100 | Ga0265327_10005972 | 3300031251 | Bacteria | 9915 |
| 101 | Ga0307513_10000208 | 3300031456 | Bacteria | 84906 |
| 102 | Ga0307513_10000764 | 3300031456 | Bacteria | 46492 |
| 103 | Ga0307513_10011006 | 3300031456 | Bacteria | 11285 |
| 104 | Ga0307513_10011796 | 3300031456 | Bacteria | 10833 |
| 105 | Ga0307516_10000020 | 3300031730 | Bacteria | 195931 |
| 106 | Ga0307406_10001992 | 3300031901 | Bacteria | 11160 |
| 107 | Ga0307414_10011588 | 3300032004 | Bacteria | 5178 |
| 108 | Ga0307414_10012136 | 3300032004 | Bacteria | 5082 |
| 109 | Ga0307510_10008320 | 3300033180 | Bacteria | 12363 |
| 110 | Ga0373936_0004819 | 3300035113 | Bacteria | 5090 |
| 111 | Ga0373931_0031554 | 3300035691 | Bacteria | 2736 |
| 112 | Ga0373927_0003701 | 3300035695 | Bacteria | 10877 |
| 113 | Ga0373925_0000111 | 3300037068 | Bacteria | 87426 |
| 114 | Ga0395899_0000666 | 3300037312 | Bacteria | 34912 |
| 115 | Ga0395900_0000016 | 3300037418 | Bacteria | 382407 |
| 116 | Ga0395900_0008966 | 3300037418 | Bacteria | 10258 |
| 117 | Ga0395898_0014241 | 3300037466 | Bacteria | 8174 |
| 118 | Ga0395905_0003448 | 3300037471 | Bacteria | 16921 |
| 119 | Ga0395905_0018520 | 3300037471 | Bacteria | 6610 |
| 120 | Ga0395901_0000022 | 3300038443 | Bacteria | 296356 |
| 121 | Ga0395901_0007043 | 3300038443 | Bacteria | 11366 |
| 122 | Ga0436365_0980217 | 3300039437 | Bacteria | 43548 |
| 123 | Ga0436365_1256094 | 3300039437 | Bacteria | 14655 |
| 124 | Ga0436361_0141919 | 3300039447 | Bacteria | 3678 |
| 125 | Ga0436361_0946917 | 3300039447 | Bacteria | 13973 |
| 126 | Ga0495638_0001665 | 3300046460 | Bacteria | 19654 |
| 127 | Ga0495620_0025604 | 3300046515 | Bacteria | 2788 |
| 128 | Ga0495643_0008479 | 3300046522 | Bacteria | 6503 |
| 129 | Ga0495597_0000444 | 3300046542 | Bacteria | 35383 |
| 130 | Ga0495633_0002739 | 3300046558 | Bacteria | 12200 |
| 131 | Ga0495669_0000005 | 3300046684 | Bacteria | 193971 |
| 132 | Ga0495669_0000285 | 3300046684 | Bacteria | 28807 |
| 133 | Ga0495613_0001303 | 3300046689 | Bacteria | 19069 |
| 134 | Ga0495649_0000623 | 3300046694 | Bacteria | 29180 |
| 135 | Ga0495660_0033601 | 3300046810 | Bacteria | 2874 |
| 136 | Ga0495672_0007921 | 3300047320 | Bacteria | 7923 |
| 137 | Ga0495672_0026727 | 3300047320 | Bacteria | 3678 |
| 138 | Ga0495677_0005648 | 3300047445 | Bacteria | 4741 |
| 139 | Ga0495686_0009674 | 3300047472 | Bacteria | 6923 |
| 140 | Ga0496102_0022425 | 3300048905 | Bacteria | 5594 |
| 141 | Ga0496115_0000481 | 3300048918 | Bacteria | 31582 |
| 142 | Ga0496121_0000053 | 3300048924 | Bacteria | 312611 |
| 143 | Ga0496122_0012345 | 3300048925 | Bacteria | 8524 |
| 144 | Ga0496123_0002037 | 3300048926 | Bacteria | 26111 |
| 145 | Ga0496125_0001747 | 3300048928 | Bacteria | 30174 |
| 146 | Ga0501047_0001497 | 3300049581 | Bacteria | 22769 |
| 147 | Ga0501047_0065178 | 3300049581 | Bacteria | 3512 |
| 148 | Ga0501047_0095654 | 3300049581 | Bacteria | 2849 |
| 149 | Ga0501044_0041726 | 3300049823 | Bacteria | 4776 |
| 150 | Ga0500635_0000115 | 3300053080 | Bacteria | 47775 |
| 151 | Ga0500595_006126 | 3300053119 | Bacteria | 5153 |
| 152 | Ga0500559_0000152 | 3300053136 | Bacteria | 54664 |
| 153 | 2643779557 | 2643221552 | Bacteria | 5708754 |
| 154 | 2643883897 | 2643221574 | Bacteria | 2789653 |
| 155 | 2644000569 | 2643221598 | Bacteria | 4578346 |
| 156 | 2644088490 | 2643221614 | Bacteria | 4260023 |
| 157 | 2644343726 | 2643221661 | Bacteria | 4267604 |
| 158 | 2644353131 | 2643221663 | Bacteria | 3425771 |
| 159 | 2644368796 | 2643221666 | Bacteria | 4265935 |
| 160 | 2644550943 | 2643221699 | Bacteria | 5731501 |
| 161 | 2644551160 | 2643221699 | Bacteria | 5731501 |
| 162 | 2928973257 | 2928972540 | Bacteria | 3058286 |
| 163 | 2941486360 | 2941485952 | Bacteria | 3591484 |
| 164 | 2977240748 | 2977240413 | Bacteria | 3191065 |
| 165 | Ga0070667_100002816 | |||
| 166 | Ga0006562J51391_1068546 | |||
| 167 | Ga0055536_1000484 | |||
| 168 | Ga0055530_10001367 | |||
| 169 | Ga0055531_10008761 | |||
| 170 | Ga0065165_1000542 | |||
| 171 | Ga0070670_100000044 | |||
| 172 | Ga0068869_100024274 | |||
| 173 | Ga0070668_100000098 | |||
| 174 | Ga0070671_100009271 | |||
| 175 | Ga0070659_100004793 | |||
| 176 | Ga0070667_100000356 | |||
| 177 | Ga0070667_100006944 | |||
| 178 | Ga0070667_100015549 | |||
| 179 | Ga0070681_10016591 | |||
| 180 | Ga0070665_100000144 | |||
| 181 | Ga0070665_100000762 | |||
| 182 | Ga0070665_100027501 | |||
| 183 | Ga0068855_100079277 | |||
| 184 | Ga0068859_100001088 | |||
| 185 | Ga0068864_100000060 | |||
| 186 | Ga0068864_100000061 | |||
| 187 | Ga0068863_100000023 | |||
| 188 | Ga0068863_100002498 | |||
| 189 | Ga0068863_100006335 | |||
| 190 | Ga0068858_100000363 | |||
| 191 | Ga0068858_100001420 | |||
| 192 | Ga0068858_100024192 | |||
| 193 | Ga0068860_100000115 | |||
| 194 | Ga0068860_100000122 | |||
| 195 | Ga0068860_100012676 | |||
| 196 | Ga0068860_100019462 | |||
| 197 | Ga0068862_100001272 | |||
| 198 | Ga0068862_100008719 | |||
| 199 | Ga0068862_100046692 | |||
| 200 | Ga0097620_100001088 | |||
| 201 | Ga0105240_10001080 | |||
| 202 | Ga0105240_10001863 | |||
| 203 | Ga0105240_10013562 | |||
| 204 | Ga0105248_10001990 | |||
| 205 | Ga0105248_10007703 | |||
| 206 | Ga0105248_10019992 | |||
| 207 | Ga0105248_10048096 | |||
| 208 | Ga0105249_10000478 | |||
| 209 | Ga0157373_10003642 | |||
| 210 | Ga0157369_10035316 | |||
| 211 | Ga0163163_10011534 | |||
| 212 | Ga0163163_10058261 | |||
| 213 | Ga0157379_10000663 | |||
| 214 | Ga0213872_10005785 | |||
| 215 | Ga0213876_10015113 | |||
| 216 | Ga0209676_1000038 | |||
| 217 | Ga0209676_1001282 | |||
| 218 | Ga0209758_1002333 | |||
| 219 | Ga0209050_1000639 | |||
| 220 | Ga0209257_1000060 | |||
| 221 | Ga0209257_1000540 | |||
| 222 | Ga0207695_10015986 | |||
| 223 | Ga0207695_10018255 | |||
| 224 | Ga0207695_10071965 | |||
| 225 | Ga0207657_10003177 | |||
| 226 | Ga0207681_10037552 | |||
| 227 | Ga0207650_10000065 | |||
| 228 | Ga0207690_10003203 | |||
| 229 | Ga0207704_10013159 | |||
| 230 | Ga0207711_10001692 | |||
| 231 | Ga0207711_10007667 | |||
| 232 | Ga0207711_10014420 | |||
| 233 | Ga0207667_10025769 | |||
| 234 | Ga0207667_10027678 | |||
| 235 | Ga0207712_10000625 | |||
| 236 | Ga0207668_10000018 | |||
| 237 | Ga0207668_10000243 | |||
| 238 | Ga0207668_10003734 | |||
| 239 | Ga0207658_10000168 | |||
| 240 | Ga0207658_10005254 | |||
| 241 | Ga0207658_10010450 | |||
| 242 | Ga0207703_10000373 | |||
| 243 | Ga0207703_10011534 | |||
| 244 | Ga0207641_10000067 | |||
| 245 | Ga0207641_10000709 | |||
| 246 | Ga0207641_10009728 | |||
| 247 | Ga0207676_10000062 | |||
| 248 | Ga0207676_10000243 | |||
| 249 | Ga0268266_10000003 | |||
| 250 | Ga0268266_10001138 | |||
| 251 | Ga0268266_10001678 | |||
| 252 | Ga0268266_10015729 | |||
| 253 | Ga0268265_10000654 | |||
| 254 | Ga0268265_10001007 | |||
| 255 | Ga0268265_10004949 | |||
| 256 | Ga0268265_10035293 | |||
| 257 | Ga0268264_10000002 | |||
| 258 | Ga0268264_10000172 | |||
| 259 | Ga0307517_10000705 | |||
| 260 | Ga0307517_10044428 | |||
| 261 | Ga0265338_10010262 | |||
| 262 | Ga0265338_10065070 | |||
| 263 | Ga0265327_10000740 | |||
| 264 | Ga0265327_10005972 | |||
| 265 | Ga0307513_10000208 | |||
| 266 | Ga0307513_10000764 | |||
| 267 | Ga0307513_10011006 | |||
| 268 | Ga0307513_10011796 | |||
| 269 | Ga0307516_10000020 | |||
| 270 | Ga0307406_10001992 | |||
| 271 | Ga0307414_10011588 | |||
| 272 | Ga0307414_10012136 | |||
| 273 | Ga0307510_10008320 | |||
| 274 | Ga0373936_0004819 | |||
| 275 | Ga0373931_0031554 | |||
| 276 | Ga0373927_0003701 | |||
| 277 | Ga0373925_0000111 | |||
| 278 | Ga0395899_0000666 | |||
| 279 | Ga0395900_0000016 | |||
| 280 | Ga0395900_0008966 | |||
| 281 | Ga0395898_0014241 | |||
| 282 | Ga0395905_0003448 | |||
| 283 | Ga0395905_0018520 | |||
| 284 | Ga0395901_0000022 | |||
| 285 | Ga0395901_0007043 | |||
| 286 | Ga0436365_0980217 | |||
| 287 | Ga0436365_1256094 | |||
| 288 | Ga0436361_0141919 | |||
| 289 | Ga0436361_0946917 | |||
| 290 | Ga0495638_0001665 | |||
| 291 | Ga0495620_0025604 | |||
| 292 | Ga0495643_0008479 | |||
| 293 | Ga0495597_0000444 | |||
| 294 | Ga0495633_0002739 | |||
| 295 | Ga0495669_0000005 | |||
| 296 | Ga0495669_0000285 | |||
| 297 | Ga0495613_0001303 | |||
| 298 | Ga0495649_0000623 | |||
| 299 | Ga0495660_0033601 | |||
| 300 | Ga0495672_0007921 | |||
| 301 | Ga0495672_0026727 | |||
| 302 | Ga0495677_0005648 | |||
| 303 | Ga0495686_0009674 | |||
| 304 | Ga0496102_0022425 | |||
| 305 | Ga0496115_0000481 | |||
| 306 | Ga0496121_0000053 | |||
| 307 | Ga0496122_0012345 | |||
| 308 | Ga0496123_0002037 | |||
| 309 | Ga0496125_0001747 | |||
| 310 | Ga0501047_0001497 | |||
| 311 | Ga0501047_0065178 | |||
| 312 | Ga0501047_0095654 | |||
| 313 | Ga0501044_0041726 | |||
| 314 | Ga0500635_0000115 | |||
| 315 | Ga0500595_006126 | |||
| 316 | Ga0500559_0000152 | |||
| 317 | 2643779557 | |||
| 318 | 2643883897 | |||
| 319 | 2644000569 | |||
| 320 | 2644088490 | |||
| 321 | 2644343726 | |||
| 322 | 2644353131 | |||
| 323 | 2644368796 | |||
| 324 | 2644550943 | |||
| 325 | 2644551160 | |||
| 326 | 2928973257 | |||
| 327 | 2941486360 | |||
| 328 | 2977240748 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6jtz-assembly1.cif.gz_A | crystal structure of hrecq1_d2-zn-wh containing mutation on beta-hairpin | 0.7264 | 156 | 280 |
| 6jtz-assembly1.cif.gz_B | crystal structure of hrecq1_d2-zn-wh containing mutation on beta-hairpin | 0.7197 | 154 | 280 |
| 2hjv-assembly2.cif.gz_B | structure of the second domain (residues 207-368) of the bacillus subtilis yxin protein | 0.7168 | 157 | 301 |
| 6gen-assembly1.cif.gz_M | chromatin remodeller-nucleosome complex at 4.5 a resolution. | 0.7045 | 170 | 284 |
| 3rc3-assembly1.cif.gz_A | human mitochondrial helicase suv3 | 0.6975 | 6 | 487 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A0P0VQJ4_229_320_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8322 | 172 | 225 | 3.40.50.300 |
| 3rc3A04 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8205 | 153 | 296 | 3.40.50.300 |
| af_A0A0R0FN75_187_265_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8081 | 166 | 226 | 3.40.50.300 |
| af_Q0ILZ4_321_478_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.8072 | 170 | 294 | 3.40.50.300 |
| 3rc3A04 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.7996 | 153 | 296 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A257JEX6-F1-model_v4 | Helicase C-terminal domain-containing protein | 0.9671 | 147 | 475 |
GO:0004386
GO:0005524 GO:0016787 |
| AF-A0A257JEX6-F1-model_v4 | Helicase C-terminal domain-containing protein | 0.9614 | 147 | 475 |
GO:0004386
GO:0005524 GO:0016787 |
| AF-A0A531KM62-F1-model_v4 | Helicase | 0.9572 | 107 | 310 |
GO:0004386
GO:0005524 GO:0016787 |
| AF-A0A436VBT4-F1-model_v4 | Helicase | 0.9542 | 154 | 446 |
GO:0004386
GO:0005524 GO:0016787 |
| AF-A0A6B3UP58-F1-model_v4 | Phosphonate-binding protein | 0.9517 | 555 | 782 |
|