F239418

General Info

Members Datasets Scaffolds Average Seq Length
162 121 157 422

Family's Representative Sequence

Representative Sequence 3300025907|Ga0207645_10042122|Ga0207645_100421222
Length 453
Sequence MKHSQAEILREYGPFPGVERIHGVSYDGENVWFASGDRLNAFDPQNFLKGETRADVCIVGGGISGLSAALHLAERGFSVALLEAQHLGFGGSGRSGGQTIFGYASGQEKLEKLVGKADARLMWDIALEGMKLQRELIAKHSIACDYVAGHMHVGVKARHDAELRAEVESLHEHYGYRSVRLIGREELRTLVPSERYTSALYDSNSGHLQPYKFTLGLAAAAARSGVKIFEKSWVTKLELASAADADSLVHTASGTVRARHVLIAGNALLGRLVPELARKLMAVGTYIAATEVLGEERARTLITNNAAVADINWVLDYFRRSADHRLLFGGRVSYSGIDPFDSARVLRARISRVFPRLNPRIEYAWGGYVDITPNRAPHFGRLAPNAYFLQGFSGHGMVLSVIAGKLVAEAMRGTAERFDVFARIPHSDFPGGTYFRRPALVLAMLWFRLKDLL

Samples

Sample ID Description Type Environment
1 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
2 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
3 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
4 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
5 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
51 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
76 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
77 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
85 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
86 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
87 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
90 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
91 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
92 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
93 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
94 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
95 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
96 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
97 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
98 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
104 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
105 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
106 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
107 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
108 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
109 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
110 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
111 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
112 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
113 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
114 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
115 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
116 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
117 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
118 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
119 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
120 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
121 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.91
Metatranscriptomes 0
Isolates 3.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.23
Nodule 0
Rhizoplane 1.23
Rhizosphere 91.36
Stem 0
Stem Tuber 0
Unclassified 6.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10013069 3300003322 Bacteria 5249
2 Ga0065704_10001736 3300005289 Bacteria 12746
3 Ga0065707_10164697 3300005295 Bacteria 1532
4 Ga0070690_100011283 3300005330 Bacteria 5224
5 Ga0070682_100015095 3300005337 Bacteria 4472
6 Ga0070689_100011318 3300005340 Bacteria 6386
7 Ga0070692_10103641 3300005345 Bacteria 1563
8 Ga0070669_100197911 3300005353 Bacteria 1580
9 Ga0070675_100028274 3300005354 Bacteria 4513
10 Ga0070675_100028313 3300005354 Bacteria 4510
11 Ga0070674_100023453 3300005356 Bacteria 3995
12 Ga0070674_100038020 3300005356 Bacteria 3240
13 Ga0070673_100022776 3300005364 Unclassified 4565
14 Ga0070673_100070942 3300005364 Bacteria 2797
15 Ga0070714_100018348 3300005435 Bacteria 5682
16 Ga0070713_100174570 3300005436 Bacteria 1927
17 Ga0070701_10000808 3300005438 Bacteria 11180
18 Ga0070711_100012478 3300005439 Bacteria 5311
19 Ga0070705_100002820 3300005440 Bacteria 8666
20 Ga0070700_100072192 3300005441 Bacteria 2206
21 Ga0070685_10054709 3300005466 Bacteria 2316
22 Ga0070706_100229932 3300005467 Unclassified 1731
23 Ga0070672_100016081 3300005543 Bacteria 5350
24 Ga0070672_100017796 3300005543 Bacteria 5122
25 Ga0070665_100022422 3300005548 Bacteria 6354
26 Ga0070665_100123934 3300005548 Bacteria 2586
27 Ga0070664_100043890 3300005564 Bacteria 3774
28 Ga0068856_100013470 3300005614 Bacteria 7914
29 Ga0068859_100018746 3300005617 Bacteria 6954
30 Ga0068861_100003370 3300005719 Bacteria 10589
31 Ga0068861_100017461 3300005719 Bacteria 5096
32 Ga0068861_100089108 3300005719 Bacteria 2431
33 Ga0068870_10074682 3300005840 Bacteria 1858
34 Ga0068863_100016327 3300005841 Bacteria 7125
35 Ga0068863_100257689 3300005841 Bacteria 1686
36 Ga0068860_100071421 3300005843 Bacteria 3299
37 Ga0068860_100136046 3300005843 Bacteria 2360
38 Ga0068860_100217407 3300005843 Unclassified 1855
39 Ga0081455_10008814 3300005937 Bacteria 10438
40 Ga0070716_100024894 3300006173 Bacteria 3188
41 Ga0070712_100025058 3300006175 Bacteria 3960
42 Ga0068871_100030354 3300006358 Bacteria 4256
43 Ga0068871_100155617 3300006358 Unclassified 1952
44 Ga0075430_100037221 3300006846 Bacteria 4125
45 Ga0068865_100042216 3300006881 Bacteria 3109
46 Ga0075436_100033183 3300006914 Bacteria 3558
47 Ga0097620_100018746 3300006931 Bacteria 6954
48 Ga0075435_100010333 3300007076 Bacteria 6823
49 Ga0099795_10000022 3300007788 Bacteria 52585
50 Ga0111539_10007445 3300009094 Bacteria 14024
51 Ga0111539_10396135 3300009094 Unclassified 1608
52 Ga0105243_10077275 3300009148 Bacteria 2707
53 Ga0099796_10000025 3300010159 Bacteria 37858
54 Ga0157375_10025448 3300013308 Bacteria 5499
55 Ga0157380_10000110 3300014326 Bacteria 44612
56 Ga0157380_10008112 3300014326 Bacteria 7484
57 Ga0157376_10031860 3300014969 Bacteria 4227
58 Ga0213871_10002765 3300021441 Bacteria 3279
59 Ga0207697_10049361 3300025315 Bacteria 1737
60 Ga0207682_10000773 3300025893 Bacteria 14767
61 Ga0207682_10013972 3300025893 Bacteria 3127
62 Ga0207645_10042122 3300025907 Bacteria 2922
63 Ga0207643_10047021 3300025908 Bacteria 2440
64 Ga0207643_10089047 3300025908 Bacteria 1797
65 Ga0207693_10028007 3300025915 Bacteria 4453
66 Ga0207681_10143737 3300025923 Bacteria 1780
67 Ga0207664_10009688 3300025929 Bacteria 6773
68 Ga0207706_10138507 3300025933 Unclassified 2140
69 Ga0207670_10011926 3300025936 Bacteria 5061
70 Ga0207704_10150552 3300025938 Bacteria 1641
71 Ga0207665_10042229 3300025939 Bacteria 3048
72 Ga0207691_10000808 3300025940 Bacteria 31167
73 Ga0207691_10001517 3300025940 Bacteria 23102
74 Ga0207691_10008106 3300025940 Bacteria 10089
75 Ga0207689_10008065 3300025942 Bacteria 9188
76 Ga0207689_10078477 3300025942 Bacteria 2713
77 Ga0207708_10012510 3300026075 Bacteria 6327
78 Ga0207708_10098215 3300026075 Bacteria 2263
79 Ga0207702_10341233 3300026078 Bacteria 1431
80 Ga0207641_10106111 3300026088 Bacteria 2482
81 Ga0207648_10059543 3300026089 Unclassified 3331
82 Ga0207648_10245842 3300026089 Bacteria 1594
83 Ga0207676_10047615 3300026095 Bacteria 3324
84 Ga0207674_10147241 3300026116 Bacteria 2313
85 Ga0207675_100018290 3300026118 Bacteria 6534
86 Ga0207675_100234450 3300026118 Bacteria 1772
87 Ga0207683_10005061 3300026121 Bacteria 11306
88 Ga0209179_1000130 3300027512 Bacteria 8124
89 Ga0268265_10049262 3300028380 Bacteria 3167
90 Ga0268264_10047210 3300028381 Bacteria 3580
91 Ga0307513_10050884 3300031456 Bacteria 4474
92 Ga0307513_10052891 3300031456 Bacteria 4369
93 Ga0307513_10053281 3300031456 Bacteria 4350
94 Ga0307513_10082398 3300031456 Bacteria 3312
95 Ga0265313_10056655 3300031595 Bacteria 1853
96 Ga0307516_10086037 3300031730 Bacteria 2980
97 Ga0307413_10003970 3300031824 Bacteria 6346
98 Ga0307410_10001323 3300031852 Bacteria 11071
99 Ga0307410_10008155 3300031852 Bacteria 5791
100 Ga0307410_10134159 3300031852 Bacteria 1823
101 Ga0307409_100017140 3300031995 Bacteria 4817
102 Ga0307409_100075393 3300031995 Bacteria 2700
103 Ga0307409_100237482 3300031995 Bacteria 1657
104 Ga0307416_100119198 3300032002 Bacteria 2347
105 Ga0307411_10052448 3300032005 Bacteria 2666
106 Ga0307411_10053868 3300032005 Bacteria 2638
107 Ga0307415_100031109 3300032126 Bacteria 3434
108 Ga0316574_0170461 3300035398 Bacteria 1401
109 Ga0316584_0194279 3300036712 Bacteria 1499
110 Ga0436360_0255389 3300039438 Bacteria 5832
111 Ga0451791_0283551 3300041451 Bacteria 2073
112 Ga0451577_0004093 3300042876 Bacteria 15661
113 Ga0451577_0048068 3300042876 Bacteria 3813
114 Ga0451577_0237297 3300042876 Bacteria 1649
115 Ga0453684_0006522 3300044712 Bacteria 22113
116 Ga0453684_0197264 3300044712 Bacteria 2349
117 Ga0495590_0018527 3300046457 Bacteria 2491
118 Ga0495638_0003089 3300046460 Bacteria 13209
119 Ga0495638_0010212 3300046460 Bacteria 6537
120 Ga0495585_0043058 3300046492 Bacteria 2527
121 Ga0495616_0015113 3300046513 Bacteria 4296
122 Ga0495620_0062669 3300046515 Bacteria 1544
123 Ga0495625_0004128 3300046660 Bacteria 13860
124 Ga0495625_0006236 3300046660 Bacteria 10680
125 Ga0495625_0028998 3300046660 Bacteria 4143
126 Ga0495649_0012652 3300046694 Bacteria 4897
127 Ga0496114_0027400 3300048917 Bacteria 4667
128 Ga0501031_0019774 3300049568 Bacteria 4388
129 Ga0501039_0007168 3300049575 Bacteria 8493
130 Ga0501039_0143245 3300049575 Bacteria 1878
131 Ga0501040_0004552 3300049576 Bacteria 9002
132 Ga0501041_0005343 3300049577 Bacteria 7519
133 Ga0501041_0028312 3300049577 Bacteria 3380
134 Ga0501043_0322820 3300049579 Bacteria 1177
135 Ga0501067_0010198 3300049583 Bacteria 5197
136 Ga0501068_0002769 3300049584 Bacteria 9316
137 Ga0501068_0045160 3300049584 Bacteria 2654
138 Ga0501069_0085081 3300049585 Bacteria 1784
139 Ga0501071_0001484 3300049587 Bacteria 13637
140 Ga0501072_0008853 3300049588 Bacteria 7646
141 Ga0501073_0001004 3300049589 Bacteria 20351
142 Ga0501073_0056404 3300049589 Bacteria 2748
143 Ga0501075_0052784 3300049591 Bacteria 3057
144 Ga0501076_0000757 3300049592 Bacteria 20885
145 Ga0501076_0021396 3300049592 Bacteria 4961
146 Ga0501077_0002336 3300049593 Bacteria 11426
147 Ga0501079_0000142 3300049741 Bacteria 39341
148 Ga0501079_0001187 3300049741 Bacteria 18244
149 Ga0501080_0002846 3300049742 Bacteria 15209
150 Ga0501081_0000552 3300049743 Bacteria 21253
151 Ga0501083_0016059 3300049744 Bacteria 5243
152 nmdc:mga0rr50_40354_c1 3300050513 Bacteria 3393
153 nmdc:mga08x19_6189_c1 3300050514 Bacteria 7075
154 Ga0500583_0024204 3300053092 Bacteria 2573
155 Ga0500637_0000126 3300053178 Bacteria 27714
156 Ga0501082_0045025 3300060353 Bacteria 3806
157 Ga0530510_0012907 3300061734 Bacteria 5874

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049579 Ga0501043_0322820 Ga0501043_0322820_14_1048 343
2 3300049585 Ga0501069_0085081 Ga0501069_0085081_25_1071 348
3 3300060353 Ga0501082_0045025 Ga0501082_0045025_1726_2841 370
4 3300039438 Ga0436360_0255389 Ga0436360_0255389_3944_5071 375
5 3300025938 Ga0207704_10150552 Ga0207704_101505521 379
6 3300005719 Ga0068861_100089108 Ga0068861_1000891082 400
7 3300005843 Ga0068860_100217407 Ga0068860_1002174072 400
8 3300026075 Ga0207708_10098215 Ga0207708_100982152 400
9 3300026118 Ga0207675_100018290 Ga0207675_1000182903 400
10 3300031595 Ga0265313_10056655 Ga0265313_100566551 402
11 3300035398 Ga0316574_0170461 Ga0316574_0170461_171_1382 403
12 3300036712 Ga0316584_0194279 Ga0316584_0194279_269_1480 403
13 3300041451 Ga0451791_0283551 Ga0451791_0283551_90_1379 403
14 3300005548 Ga0070665_100022422 Ga0070665_1000224222 405
15 3300049577 Ga0501041_0028312 Ga0501041_0028312_1325_2578 405
16 3300031824 Ga0307413_10003970 Ga0307413_100039702 406
17 3300031852 Ga0307410_10001323 Ga0307410_100013233 406
18 3300031852 Ga0307410_10008155 Ga0307410_100081554 406
19 3300031995 Ga0307409_100075393 Ga0307409_1000753932 406
20 3300032002 Ga0307416_100119198 Ga0307416_1001191982 406
21 3300032005 Ga0307411_10052448 Ga0307411_100524482 406
22 3300032005 Ga0307411_10053868 Ga0307411_100538683 406
23 3300031730 Ga0307516_10086037 Ga0307516_100860373 407
24 3300050513 nmdc:mga0rr50_40354_c1 nmdc:mga0rr50_40354_c1_400_1629 407
25 3300050514 nmdc:mga08x19_6189_c1 nmdc:mga08x19_6189_c1_5678_6907 407
26 3300053178 Ga0500637_0000126 Ga0500637_0000126_17203_18462 408
27 3300031456 Ga0307513_10082398 Ga0307513_100823982 409
28 3300046460 Ga0495638_0010212 Ga0495638_0010212_277_1557 409
29 3300046660 Ga0495625_0006236 Ga0495625_0006236_4398_5675 409
30 3300046694 Ga0495649_0012652 Ga0495649_0012652_748_2025 409
31 3300005564 Ga0070664_100043890 Ga0070664_1000438902 411
32 3300005840 Ga0068870_10074682 Ga0068870_100746822 411
33 3300026089 Ga0207648_10245842 Ga0207648_102458422 411
34 iso_pu_bacteria 2522572158 2523105206 411
35 iso_pu_bacteria 2597490356 2599101095 411
36 iso_pu_bacteria 2846952575 2846954185 411
37 iso_pu_bacteria 2848858292 2848859660 411
38 3300005289 Ga0065704_10001736 Ga0065704_100017363 412
39 3300005467 Ga0070706_100229932 Ga0070706_1002299321 412
40 3300005719 Ga0068861_100017461 Ga0068861_1000174614 412
41 3300006846 Ga0075430_100037221 Ga0075430_1000372213 412
42 3300031852 Ga0307410_10134159 Ga0307410_101341592 412
43 3300053092 Ga0500583_0024204 Ga0500583_0024204_1145_2416 412
44 3300005295 Ga0065707_10164697 Ga0065707_101646971 413
45 3300014326 Ga0157380_10000110 Ga0157380_1000011023 413
46 3300046460 Ga0495638_0003089 Ga0495638_0003089_8742_10016 413
47 3300046660 Ga0495625_0004128 Ga0495625_0004128_10487_11761 413
48 3300049568 Ga0501031_0019774 Ga0501031_0019774_2966_4243 413
49 3300007788 Ga0099795_10000022 Ga0099795_1000002218 414
50 3300010159 Ga0099796_10000025 Ga0099796_1000002516 414
51 3300025907 Ga0207645_10042122 Ga0207645_100421222 414
52 3300025933 Ga0207706_10138507 Ga0207706_101385072 414
53 3300027512 Ga0209179_1000130 Ga0209179_10001304 414
54 3300042876 Ga0451577_0004093 Ga0451577_0004093_2127_3410 414
55 3300042876 Ga0451577_0048068 Ga0451577_0048068_193_1476 414
56 3300042876 Ga0451577_0237297 Ga0451577_0237297_166_1449 414
57 3300044712 Ga0453684_0006522 Ga0453684_0006522_3231_4514 414
58 3300044712 Ga0453684_0197264 Ga0453684_0197264_1003_2289 414
59 3300046513 Ga0495616_0015113 Ga0495616_0015113_2345_3637 414
60 3300049575 Ga0501039_0007168 Ga0501039_0007168_3139_4419 414
61 3300049576 Ga0501040_0004552 Ga0501040_0004552_6552_7832 414
62 3300049577 Ga0501041_0005343 Ga0501041_0005343_1420_2700 414
63 3300049584 Ga0501068_0045160 Ga0501068_0045160_849_2129 414
64 3300049592 Ga0501076_0000757 Ga0501076_0000757_5679_6959 414
65 3300049741 Ga0501079_0001187 Ga0501079_0001187_8785_10065 414
66 3300049743 Ga0501081_0000552 Ga0501081_0000552_17729_19009 414
67 3300061734 Ga0530510_0012907 Ga0530510_0012907_3486_4766 414
68 iso_pu_bacteria 3000017691 3000020585 414
69 3300005354 Ga0070675_100028274 Ga0070675_1000282742 415
70 3300005364 Ga0070673_100022776 Ga0070673_1000227762 415
71 3300005435 Ga0070714_100018348 Ga0070714_1000183482 415
72 3300005436 Ga0070713_100174570 Ga0070713_1001745702 415
73 3300005439 Ga0070711_100012478 Ga0070711_1000124785 415
74 3300005614 Ga0068856_100013470 Ga0068856_1000134708 415
75 3300006173 Ga0070716_100024894 Ga0070716_1000248941 415
76 3300006175 Ga0070712_100025058 Ga0070712_1000250583 415
77 3300006358 Ga0068871_100155617 Ga0068871_1001556172 415
78 3300006914 Ga0075436_100033183 Ga0075436_1000331832 415
79 3300007076 Ga0075435_100010333 Ga0075435_1000103333 415
80 3300009094 Ga0111539_10396135 Ga0111539_103961351 415
81 3300009148 Ga0105243_10077275 Ga0105243_100772753 415
82 3300021441 Ga0213871_10002765 Ga0213871_100027653 415
83 3300025315 Ga0207697_10049361 Ga0207697_100493612 415
84 3300025893 Ga0207682_10000773 Ga0207682_100007733 415
85 3300025915 Ga0207693_10028007 Ga0207693_100280074 415
86 3300025929 Ga0207664_10009688 Ga0207664_100096885 415
87 3300025939 Ga0207665_10042229 Ga0207665_100422292 415
88 3300025940 Ga0207691_10008106 Ga0207691_100081067 415
89 3300026078 Ga0207702_10341233 Ga0207702_103412331 415
90 3300026089 Ga0207648_10059543 Ga0207648_100595432 415
91 3300046515 Ga0495620_0062669 Ga0495620_0062669_132_1421 415
92 3300049589 Ga0501073_0056404 Ga0501073_0056404_1168_2448 415
93 3300005337 Ga0070682_100015095 Ga0070682_1000150953 417
94 3300005354 Ga0070675_100028313 Ga0070675_1000283134 417
95 3300005356 Ga0070674_100038020 Ga0070674_1000380202 417
96 3300005364 Ga0070673_100070942 Ga0070673_1000709421 417
97 3300005466 Ga0070685_10054709 Ga0070685_100547092 417
98 3300005543 Ga0070672_100016081 Ga0070672_1000160812 417
99 3300025893 Ga0207682_10013972 Ga0207682_100139722 417
100 3300025908 Ga0207643_10047021 Ga0207643_100470212 417
101 3300025940 Ga0207691_10001517 Ga0207691_100015173 417
102 3300026121 Ga0207683_10005061 Ga0207683_100050618 417
103 3300031456 Ga0307513_10050884 Ga0307513_100508842 417
104 3300031456 Ga0307513_10052891 Ga0307513_100528912 417
105 3300031456 Ga0307513_10053281 Ga0307513_100532813 417
106 3300003322 rootL2_10013069 rootL2_100130693 418
107 3300005330 Ga0070690_100011283 Ga0070690_1000112833 418
108 3300005340 Ga0070689_100011318 Ga0070689_1000113182 418
109 3300005345 Ga0070692_10103641 Ga0070692_101036412 418
110 3300005353 Ga0070669_100197911 Ga0070669_1001979111 418
111 3300005356 Ga0070674_100023453 Ga0070674_1000234532 418
112 3300005438 Ga0070701_10000808 Ga0070701_100008084 418
113 3300005440 Ga0070705_100002820 Ga0070705_1000028207 418
114 3300005441 Ga0070700_100072192 Ga0070700_1000721922 418
115 3300005543 Ga0070672_100017796 Ga0070672_1000177963 418
116 3300005548 Ga0070665_100123934 Ga0070665_1001239342 418
117 3300005617 Ga0068859_100018746 Ga0068859_1000187466 418
118 3300005719 Ga0068861_100003370 Ga0068861_1000033707 418
119 3300005841 Ga0068863_100016327 Ga0068863_1000163273 418
120 3300005841 Ga0068863_100257689 Ga0068863_1002576892 418
121 3300005843 Ga0068860_100071421 Ga0068860_1000714213 418
122 3300005843 Ga0068860_100136046 Ga0068860_1001360462 418
123 3300005937 Ga0081455_10008814 Ga0081455_100088143 418
124 3300006358 Ga0068871_100030354 Ga0068871_1000303542 418
125 3300006881 Ga0068865_100042216 Ga0068865_1000422163 418
126 3300006931 Ga0097620_100018746 Ga0097620_1000187463 418
127 3300009094 Ga0111539_10007445 Ga0111539_1000744511 418
128 3300013308 Ga0157375_10025448 Ga0157375_100254483 418
129 3300014326 Ga0157380_10008112 Ga0157380_100081123 418
130 3300014969 Ga0157376_10031860 Ga0157376_100318602 418
131 3300025908 Ga0207643_10089047 Ga0207643_100890471 418
132 3300025923 Ga0207681_10143737 Ga0207681_101437372 418
133 3300025936 Ga0207670_10011926 Ga0207670_100119262 418
134 3300025940 Ga0207691_10000808 Ga0207691_100008085 418
135 3300025942 Ga0207689_10008065 Ga0207689_100080658 418
136 3300025942 Ga0207689_10078477 Ga0207689_100784772 418
137 3300026075 Ga0207708_10012510 Ga0207708_100125104 418
138 3300026088 Ga0207641_10106111 Ga0207641_101061113 418
139 3300026095 Ga0207676_10047615 Ga0207676_100476152 418
140 3300026116 Ga0207674_10147241 Ga0207674_101472412 418
141 3300026118 Ga0207675_100234450 Ga0207675_1002344502 418
142 3300028380 Ga0268265_10049262 Ga0268265_100492622 418
143 3300028381 Ga0268264_10047210 Ga0268264_100472103 418
144 3300031995 Ga0307409_100017140 Ga0307409_1000171402 418
145 3300031995 Ga0307409_100237482 Ga0307409_1002374822 418
146 3300032126 Ga0307415_100031109 Ga0307415_1000311093 418
147 3300046457 Ga0495590_0018527 Ga0495590_0018527_827_2116 418
148 3300046492 Ga0495585_0043058 Ga0495585_0043058_1116_2405 418
149 3300046660 Ga0495625_0028998 Ga0495625_0028998_2781_4070 418
150 3300048917 Ga0496114_0027400 Ga0496114_0027400_2231_3520 418
151 3300049575 Ga0501039_0143245 Ga0501039_0143245_367_1656 418
152 3300049583 Ga0501067_0010198 Ga0501067_0010198_985_2274 418
153 3300049584 Ga0501068_0002769 Ga0501068_0002769_4800_6089 418
154 3300049587 Ga0501071_0001484 Ga0501071_0001484_4643_5932 418
155 3300049588 Ga0501072_0008853 Ga0501072_0008853_4672_5961 418
156 3300049589 Ga0501073_0001004 Ga0501073_0001004_3511_4800 418
157 3300049591 Ga0501075_0052784 Ga0501075_0052784_625_1914 418
158 3300049592 Ga0501076_0021396 Ga0501076_0021396_3431_4720 418
159 3300049593 Ga0501077_0002336 Ga0501077_0002336_4103_5392 418
160 3300049741 Ga0501079_0000142 Ga0501079_0000142_23408_24697 418
161 3300049742 Ga0501080_0002846 Ga0501080_0002846_10402_11691 418
162 3300049744 Ga0501083_0016059 Ga0501083_0016059_3921_5210 418

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01266

DAO

FAD dependent oxidoreductase

55

410

0.88

PF01494

FAD_binding_3

FAD binding domain

53

99

0.88

PF01946

Thi4

Thi4 family

45

118

0.88

PF00890

FAD_binding_2

FAD binding domain

55

133

0.87

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

58

105

0.87

PF12831

FAD_oxidored

FAD dependent oxidoreductase

55

173

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
6aa8-assembly1.cif.gz_F crystal structure of (s)-3-hydroxybutyryl-coenzymea dehydrogenase from clostridium acetobutylicum complexed with nad+ 0.9709 19 49
4oqy-assembly1.cif.gz_B streptomyces sp. gf3546 imine reductase 0.9667 19 46
5a9r-assembly1.cif.gz_A apo form of imine reductase from amycolatopsis orientalis 0.9657 19 49
4oqy-assembly1.cif.gz_A streptomyces sp. gf3546 imine reductase 0.9632 19 46
3ado-assembly1.cif.gz_A crystal structure of the rabbit l-gulonate 3-dehydrogenase 0.96 19 49
ID Description Score Start End Superfamily
af_P9WN19_146_269_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 1.01 20 49 3.50.50.60
af_K8F7V7_1826_1944_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 1.005 20 49 3.50.50.60
af_Q46811_547_618_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 1.001 19 49 3.40.50.720
2f1kD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.995 19 46 3.40.50.720
af_Q2G1C9_1_191_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9854 19 46 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A317DYN7-F1-model_v4 FAD-dependent oxidoreductase 0.9765 8 418 GO:0005737
AF-A0A1N7K871-F1-model_v4 Gamma-glutamylputrescine oxidase 0.9748 8 418 GO:0004368
GO:0005737
GO:0006072
AF-A0A1X7AR74-F1-model_v4 Gamma-glutamylputrescine oxidoreductase (EC 1.4.3.-) 0.9702 7 418 GO:0005737
GO:0016491
AF-X0Q8J5-F1-model_v4 Gamma-glutamyl-putrescine oxidase 0.9682 23 416 GO:0005737
AF-A0A0D6S4B9-F1-model_v4 Nucleoside-diphosphate-sugar epimerase 0.9672 9 418 GO:0005737

Feature Viewer

pLDDT pTM Quality
90.77 0.91 High
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Predicted Structure (AlphaFold2)

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