F232710

General Info

Members Datasets Scaffolds Average Seq Length
159 111 318 243

Family's Representative Sequence

Representative Sequence 3300039447|Ga0436361_1135212|Ga0436361_1135212_975_1796
Length 273
Sequence MVCLERKRQTEREREEHARSLREVARVDLLERSLLVVPALDLRGGRCVRLRQGDPAQEKAYDADPVARAKSFARAGATRLHVVDLDGALGSGENLAALRAICAATGVAVQTGGGIRRPGDIEARFAAGASEVIIGTLLVEDPPGARMLIERFRERLIAGIDARGDRVATRGWQQQSHVSRDALVQDVARWGVERIIYTEIARDGMGSGYDVAALTHVAKLAPVRVTASGGARTLDDLLALREGTPGTVDHAIVGRALYEGTIDLEEAIAAVEG

Samples

Sample ID Description Type Environment
1 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
50 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
51 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
52 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
65 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
66 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
67 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
68 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
69 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
70 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
71 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
72 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
73 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
79 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
80 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
81 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
82 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
83 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
84 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
87 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
88 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
89 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
90 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
91 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
92 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
93 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
94 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
101 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
102 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
103 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
104 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
105 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
106 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
107 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
108 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
109 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
110 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
111 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.86
Metatranscriptomes 3.14
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.63
Rhizosphere 89.94
Stem 0
Stem Tuber 0
Unclassified 6.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436361_1135212 3300039447 Bacteria 1811
2 JGI25406J46586_10005919 3300003203 Bacteria 5659
3 Ga0058862_12239577 3300004803 Bacteria 1578
4 Ga0065707_10083773 3300005295 Bacteria 8274
5 Ga0070658_10000960 3300005327 Bacteria 24674
6 Ga0070658_10002241 3300005327 Bacteria 16216
7 Ga0070690_100078473 3300005330 Bacteria 2157
8 Ga0070680_100024786 3300005336 Bacteria 4795
9 Ga0070667_100014842 3300005367 Bacteria 6436
10 Ga0070714_100082368 3300005435 Bacteria 2803
11 Ga0070694_100188334 3300005444 Unclassified 1531
12 Ga0070681_10052402 3300005458 Bacteria 4069
13 Ga0068867_100058267 3300005459 Bacteria 2862
14 Ga0070707_100130851 3300005468 Bacteria 2440
15 Ga0070698_100586185 3300005471 Bacteria 1055
16 Ga0070679_100007584 3300005530 Bacteria 10151
17 Ga0070695_100116779 3300005545 Bacteria 1820
18 Ga0070695_100573760 3300005545 Bacteria 882
19 Ga0070696_100011750 3300005546 Bacteria 5868
20 Ga0070704_100176388 3300005549 Bacteria 1705
21 Ga0068855_100106317 3300005563 Bacteria 3226
22 Ga0068855_100257921 3300005563 Bacteria 1943
23 Ga0070664_100852236 3300005564 Bacteria 853
24 Ga0068854_100293344 3300005578 Bacteria 1313
25 Ga0068852_100096299 3300005616 Bacteria 2660
26 Ga0068859_100014701 3300005617 Bacteria 7865
27 Ga0068861_100197297 3300005719 Bacteria 1687
28 Ga0068863_100015360 3300005841 Bacteria 7359
29 Ga0068858_100038430 3300005842 Bacteria 4439
30 Ga0068860_100011999 3300005843 Bacteria 8534
31 Ga0068862_100010385 3300005844 Bacteria 7684
32 Ga0081538_10005523 3300005981 Bacteria 11354
33 Ga0081538_10048211 3300005981 Bacteria 2601
34 Ga0081538_10082000 3300005981 Bacteria 1713
35 Ga0081539_10000088 3300005985 Bacteria 212765
36 Ga0081539_10006084 3300005985 Bacteria 11795
37 Ga0081539_10015083 3300005985 Bacteria 5658
38 Ga0075427_10003533 3300006194 Bacteria 2163
39 Ga0097621_100021360 3300006237 Bacteria 5006
40 Ga0075430_100022613 3300006846 Bacteria 5349
41 Ga0075431_100160897 3300006847 Bacteria 2309
42 Ga0075431_100276736 3300006847 Bacteria 1700
43 Ga0075433_10008473 3300006852 Bacteria 8207
44 Ga0075434_100099852 3300006871 Bacteria 2908
45 Ga0097620_100014701 3300006931 Bacteria 7865
46 Ga0114129_10028768 3300009147 Bacteria 7873
47 Ga0114129_10073419 3300009147 Bacteria 4766
48 Ga0114129_11006599 3300009147 Bacteria 1049
49 Ga0105243_10047562 3300009148 Bacteria 3378
50 Ga0105242_10113936 3300009176 Bacteria 2309
51 Ga0105242_10167416 3300009176 Bacteria 1929
52 Ga0105248_10189891 3300009177 Bacteria 2315
53 Ga0157378_10645082 3300013297 Bacteria 1074
54 Ga0163162_10048566 3300013306 Bacteria 4253
55 Ga0163162_10945480 3300013306 Bacteria 973
56 Ga0157375_10046101 3300013308 Bacteria 4248
57 Ga0163163_10732825 3300014325 Bacteria 1052
58 Ga0206356_10687076 3300020070 Unclassified 1574
59 Ga0206350_11188671 3300020080 Bacteria 5882
60 Ga0206354_10498203 3300020081 Bacteria 1120
61 Ga0213874_10008912 3300021377 Bacteria 2463
62 Ga0213875_10004827 3300021388 Bacteria 7328
63 Ga0213875_10105695 3300021388 Bacteria 1314
64 Ga0213871_10032707 3300021441 Bacteria 1364
65 Ga0213871_10064769 3300021441 Bacteria 1023
66 Ga0224712_10001747 3300022467 Bacteria 5176
67 Ga0207653_10099353 3300025885 Unclassified 1027
68 Ga0207705_10002675 3300025909 Bacteria 13650
69 Ga0207707_10018025 3300025912 Bacteria 6151
70 Ga0207652_10079160 3300025921 Bacteria 2871
71 Ga0207664_10006328 3300025929 Bacteria 8133
72 Ga0207712_10072065 3300025961 Bacteria 2487
73 Ga0207668_10377283 3300025972 Bacteria 1193
74 Ga0207658_10246528 3300025986 Bacteria 1516
75 Ga0207703_10091291 3300026035 Bacteria 2561
76 Ga0207641_10154203 3300026088 Bacteria 2083
77 Ga0268264_10392801 3300028381 Bacteria 1331
78 Ga0265338_10104821 3300028800 Bacteria 2294
79 Ga0307408_100142682 3300031548 Unclassified 1881
80 Ga0316575_10065058 3300031665 Bacteria 1460
81 Ga0316579_10035512 3300031691 Bacteria 2298
82 Ga0316576_10059720 3300031727 Bacteria 2792
83 Ga0316578_10005960 3300031728 Bacteria 5967
84 Ga0307405_10369646 3300031731 Unclassified 1113
85 Ga0316577_10012748 3300031733 Bacteria 4583
86 Ga0307410_10305047 3300031852 Bacteria 1258
87 Ga0307409_100034153 3300031995 Bacteria 3710
88 Ga0307409_100159052 3300031995 Bacteria 1973
89 Ga0307409_100212987 3300031995 Unclassified 1738
90 Ga0307409_100218229 3300031995 Unclassified 1720
91 Ga0307416_100102627 3300032002 Bacteria 2494
92 Ga0307416_100256083 3300032002 Bacteria 1707
93 Ga0307416_100386803 3300032002 Bacteria 1431
94 Ga0307416_100545705 3300032002 Bacteria 1232
95 Ga0307414_10561290 3300032004 Bacteria 1019
96 Ga0307411_10127983 3300032005 Bacteria 1851
97 Ga0307415_100058015 3300032126 Bacteria 2663
98 Ga0316582_0017682 3300036647 Bacteria 4131
99 Ga0316582_0060279 3300036647 Bacteria 2432
100 Ga0316582_0100667 3300036647 Bacteria 1913
101 Ga0316582_0356604 3300036647 Bacteria 1006
102 Ga0316584_0001965 3300036712 Bacteria 12831
103 Ga0316584_0019185 3300036712 Bacteria 4941
104 Ga0316584_0029959 3300036712 Bacteria 4019
105 Ga0436364_0485949 3300037853 Bacteria 8333
106 Ga0436364_0584671 3300037853 Bacteria 1540
107 Ga0436364_0964951 3300037853 Bacteria 34126
108 Ga0436364_0981692 3300037853 Unclassified 1751
109 Ga0436364_1090862 3300037853 Bacteria 2657
110 Ga0436364_1118908 3300037853 Bacteria 1722
111 Ga0436364_1341206 3300037853 Unclassified 982
112 Ga0436360_0054532 3300039438 Bacteria 4132
113 Ga0436360_0319961 3300039438 Bacteria 1818
114 Ga0436360_1115925 3300039438 Bacteria 16798
115 Ga0436360_1237331 3300039438 Bacteria 1317
116 Ga0436361_0794472 3300039447 Bacteria 3093
117 Ga0436363_0030738 3300039450 Bacteria 1543
118 Ga0436363_0780107 3300039450 Bacteria 3381
119 Ga0436363_1048970 3300039450 Bacteria 797
120 Ga0436363_1186431 3300039450 Bacteria 14974
121 Ga0436363_1286501 3300039450 Bacteria 1213
122 Ga0436362_0347754 3300039453 Bacteria 3246
123 Ga0436362_0973878 3300039453 Unclassified 2439
124 Ga0453683_0073415 3300044673 Bacteria 2142
125 Ga0453684_0322537 3300044712 Bacteria 1749
126 Ga0453684_0344806 3300044712 Bacteria 1681
127 Ga0453684_0379061 3300044712 Bacteria 1589
128 Ga0451576_0000651 3300045051 Bacteria 71719
129 Ga0451576_0023460 3300045051 Bacteria 6679
130 Ga0451576_0039599 3300045051 Bacteria 4988
131 Ga0451576_0260097 3300045051 Bacteria 1814
132 Ga0495580_0152446 3300046472 Bacteria 1601
133 Ga0495584_0272847 3300046491 Bacteria 860
134 Ga0495670_0138633 3300046691 Bacteria 1271
135 Ga0495581_0159017 3300047315 Bacteria 1321
136 Ga0495604_0017103 3300047317 Bacteria 5801
137 Ga0495676_0107016 3300047321 Bacteria 2059
138 Ga0496107_0366511 3300048910 Bacteria 1072
139 Ga0501031_0234158 3300049568 Bacteria 1195
140 Ga0501036_0145287 3300049572 Bacteria 2001
141 Ga0501040_0116417 3300049576 Bacteria 1872
142 Ga0501040_0347500 3300049576 Bacteria 1062
143 Ga0501041_0055286 3300049577 Bacteria 2423
144 Ga0501042_0011027 3300049578 Bacteria 6085
145 Ga0501046_0112890 3300049580 Bacteria 2075
146 Ga0501071_0114833 3300049587 Bacteria 1992
147 Ga0501074_0471197 3300049590 Bacteria 890
148 Ga0501075_0088482 3300049591 Bacteria 2348
149 Ga0501075_0301778 3300049591 Bacteria 1220
150 Ga0501075_0585230 3300049591 Bacteria 851
151 Ga0501076_0117712 3300049592 Bacteria 2150
152 Ga0501081_0388291 3300049743 Bacteria 1032
153 Ga0501045_0181340 3300049824 Bacteria 1569
154 nmdc:mga09592_643435_c1 3300050508 Bacteria 906
155 nmdc:mga06r32_162907_c1 3300050510 Bacteria 2212
156 Ga0501084_0329729 3300054114 Bacteria 1289
157 Ga0590075_001381 3300059424 Bacteria 6086
158 Ga0501082_0296919 3300060353 Unclassified 1407
159 Ga0530510_0005796 3300061734 Bacteria 8561
160 Ga0436361_1135212
161 JGI25406J46586_10005919
162 Ga0058862_12239577
163 Ga0065707_10083773
164 Ga0070658_10000960
165 Ga0070658_10002241
166 Ga0070690_100078473
167 Ga0070680_100024786
168 Ga0070667_100014842
169 Ga0070714_100082368
170 Ga0070694_100188334
171 Ga0070681_10052402
172 Ga0068867_100058267
173 Ga0070707_100130851
174 Ga0070698_100586185
175 Ga0070679_100007584
176 Ga0070695_100116779
177 Ga0070695_100573760
178 Ga0070696_100011750
179 Ga0070704_100176388
180 Ga0068855_100106317
181 Ga0068855_100257921
182 Ga0070664_100852236
183 Ga0068854_100293344
184 Ga0068852_100096299
185 Ga0068859_100014701
186 Ga0068861_100197297
187 Ga0068863_100015360
188 Ga0068858_100038430
189 Ga0068860_100011999
190 Ga0068862_100010385
191 Ga0081538_10005523
192 Ga0081538_10048211
193 Ga0081538_10082000
194 Ga0081539_10000088
195 Ga0081539_10006084
196 Ga0081539_10015083
197 Ga0075427_10003533
198 Ga0097621_100021360
199 Ga0075430_100022613
200 Ga0075431_100160897
201 Ga0075431_100276736
202 Ga0075433_10008473
203 Ga0075434_100099852
204 Ga0097620_100014701
205 Ga0114129_10028768
206 Ga0114129_10073419
207 Ga0114129_11006599
208 Ga0105243_10047562
209 Ga0105242_10113936
210 Ga0105242_10167416
211 Ga0105248_10189891
212 Ga0157378_10645082
213 Ga0163162_10048566
214 Ga0163162_10945480
215 Ga0157375_10046101
216 Ga0163163_10732825
217 Ga0206356_10687076
218 Ga0206350_11188671
219 Ga0206354_10498203
220 Ga0213874_10008912
221 Ga0213875_10004827
222 Ga0213875_10105695
223 Ga0213871_10032707
224 Ga0213871_10064769
225 Ga0224712_10001747
226 Ga0207653_10099353
227 Ga0207705_10002675
228 Ga0207707_10018025
229 Ga0207652_10079160
230 Ga0207664_10006328
231 Ga0207712_10072065
232 Ga0207668_10377283
233 Ga0207658_10246528
234 Ga0207703_10091291
235 Ga0207641_10154203
236 Ga0268264_10392801
237 Ga0265338_10104821
238 Ga0307408_100142682
239 Ga0316575_10065058
240 Ga0316579_10035512
241 Ga0316576_10059720
242 Ga0316578_10005960
243 Ga0307405_10369646
244 Ga0316577_10012748
245 Ga0307410_10305047
246 Ga0307409_100034153
247 Ga0307409_100159052
248 Ga0307409_100212987
249 Ga0307409_100218229
250 Ga0307416_100102627
251 Ga0307416_100256083
252 Ga0307416_100386803
253 Ga0307416_100545705
254 Ga0307414_10561290
255 Ga0307411_10127983
256 Ga0307415_100058015
257 Ga0316582_0017682
258 Ga0316582_0060279
259 Ga0316582_0100667
260 Ga0316582_0356604
261 Ga0316584_0001965
262 Ga0316584_0019185
263 Ga0316584_0029959
264 Ga0436364_0485949
265 Ga0436364_0584671
266 Ga0436364_0964951
267 Ga0436364_0981692
268 Ga0436364_1090862
269 Ga0436364_1118908
270 Ga0436364_1341206
271 Ga0436360_0054532
272 Ga0436360_0319961
273 Ga0436360_1115925
274 Ga0436360_1237331
275 Ga0436361_0794472
276 Ga0436363_0030738
277 Ga0436363_0780107
278 Ga0436363_1048970
279 Ga0436363_1186431
280 Ga0436363_1286501
281 Ga0436362_0347754
282 Ga0436362_0973878
283 Ga0453683_0073415
284 Ga0453684_0322537
285 Ga0453684_0344806
286 Ga0453684_0379061
287 Ga0451576_0000651
288 Ga0451576_0023460
289 Ga0451576_0039599
290 Ga0451576_0260097
291 Ga0495580_0152446
292 Ga0495584_0272847
293 Ga0495670_0138633
294 Ga0495581_0159017
295 Ga0495604_0017103
296 Ga0495676_0107016
297 Ga0496107_0366511
298 Ga0501031_0234158
299 Ga0501036_0145287
300 Ga0501040_0116417
301 Ga0501040_0347500
302 Ga0501041_0055286
303 Ga0501042_0011027
304 Ga0501046_0112890
305 Ga0501071_0114833
306 Ga0501074_0471197
307 Ga0501075_0088482
308 Ga0501075_0301778
309 Ga0501075_0585230
310 Ga0501076_0117712
311 Ga0501081_0388291
312 Ga0501045_0181340
313 nmdc:mga09592_643435_c1
314 nmdc:mga06r32_162907_c1
315 Ga0501084_0329729
316 Ga0590075_001381
317 Ga0501082_0296919
318 Ga0530510_0005796

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00977

His_biosynth

Histidine biosynthesis protein

35

263

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5abt-assembly1.cif.gz_A s.enterica hisa mutant d7n, g102a, v106m, d176a 0.9593 4 239
5a5w-assembly1.cif.gz_A crystal structure of salmonella enterica hisa d7n d176a with profar 0.9553 4 239
4w9t-assembly1.cif.gz_A crystal structure of hisap from streptomyces sp. mg1 0.9414 1 239
4u28-assembly1.cif.gz_A crystal structure of apo phosphoribosyl isomerase a from streptomyces sviceus atcc 29083 0.9412 1 239
4x2r-assembly1.cif.gz_A crystal structure of pria from actinomyces urogenitalis 0.9385 1 240
ID Description Score Start End Superfamily
af_Q58927_1_237_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9671 3 241 3.20.20.70
af_Q58927_1_237_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9631 3 241 3.20.20.70
af_P10371_1_245_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9562 4 239 3.20.20.70
af_Q2FUU2_4_232_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.941 6 229 3.20.20.70
4x2rA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9384 1 240 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A6L9IJY7-F1-model_v4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamideisomerase (EC 5.3.1.16) 0.9883 3 212 GO:0000105
GO:0000162
GO:0003949
GO:0005737
AF-A0A351G1Z5-F1-model_v4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) 0.9874 2 236 GO:0000105
GO:0000162
GO:0003949
GO:0005737
AF-A0A2M8CR42-F1-model_v4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) 0.987 1 237 GO:0000105
GO:0000162
GO:0003949
GO:0005737
AF-A0A7C4QDD2-F1-model_v4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) 0.9864 1 241 GO:0000105
GO:0000162
GO:0003949
GO:0005737
GO:0016747
AF-A0A3B8UJB9-F1-model_v4 Histidine biosynthesis bifunctional protein HisIE (EC 3.5.4.19) (EC 5.3.1.16) 0.9862 73 237 GO:0000105
GO:0003949
GO:0004635
GO:0005737

Map