F229776

General Info

Members Datasets Scaffolds Average Seq Length
158 103 316 590

Family's Representative Sequence

Representative Sequence 3300021388|Ga0213875_10009193|Ga0213875_100091932
Length 586
Sequence MSDTASDFLIKRLTEWGIRRIFGYPGDGINGIIGAIQRAGDAIHYVQVRHEEMAAFMACAHAKFTGEVGVCLATSGPGAVHLLNGLYDAKLDHAPVVAIVGQQPRMALGGHYQQEVDLITLFKDVAHEYVHMASSPVQIRQLVDRAIRIAAAERTVTCIIIPTDVQEADAVPEPPMVHGSVHTGVGFTSPRIVPNESELRHAAEILNRAKKVAMLVGAGALRATDEVIQSKALLGRAAIPDELPFCCGSIGLLGTKPSWDMMQDCDALLMVGSSFPYSEFLPKPGSARGVQIDIDAKMLSLRYPMEVNLVGDSAETLRALIPMLERKTDRSWREKLEKEIKEWWKLMEDRAMQSADPVNPQRVFWELSPRLPDNCIVAADSGSSANWFARDLKFRRGMMASLSGTLATMGPGVPYAIGAKFAYPERVVIACVGDGAMLMNGINELVDIAEYWPQWKDPRLIVLVLANRDLNQVTWEQRVMSGDPKFNASQQVPAFPFAKYAEDIGLIGIKVDKPEQVGPAWDQAFKASRPVVLEAVTDPEVPTLPPHITLKQAKGLASSLPQDPRAGAIIRDTVKDVMAGVLPHKD

Samples

Sample ID Description Type Environment
1 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
28 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
29 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
31 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
32 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
33 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
45 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
46 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
47 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
48 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
49 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
50 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
51 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
52 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
53 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
54 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
55 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
56 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
57 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
58 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
59 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
60 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
61 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
62 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
63 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
64 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
65 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
66 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
69 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
70 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
71 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
72 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
73 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
74 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
75 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
76 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
77 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
78 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
79 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
80 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
81 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
82 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
83 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
84 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
85 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
86 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
87 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
88 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
89 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
90 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
91 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
92 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
93 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
96 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
97 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
98 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
99 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
100 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
101 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
102 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
103 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.84
Metatranscriptomes 3.16
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 14.56
Rhizosphere 69.62
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213875_10009193 3300021388 Bacteria 5015
2 Ga0065715_10116557 3300005293 Bacteria 2376
3 Ga0070683_100000842 3300005329 Bacteria 22764
4 Ga0070680_100015243 3300005336 Bacteria 6022
5 Ga0070667_100020344 3300005367 Bacteria 5510
6 Ga0070714_100082323 3300005435 Bacteria 2804
7 Ga0070713_100100488 3300005436 Bacteria 2504
8 Ga0070710_10027099 3300005437 Bacteria 3053
9 Ga0070663_100000139 3300005455 Bacteria 35134
10 Ga0070678_100016229 3300005456 Bacteria 4757
11 Ga0070679_100000202 3300005530 Bacteria 48732
12 Ga0070679_100001374 3300005530 Bacteria 21473
13 Ga0068853_100004747 3300005539 Bacteria 10563
14 Ga0070665_100000352 3300005548 Bacteria 69185
15 Ga0070665_100005362 3300005548 Bacteria 13236
16 Ga0068856_100014203 3300005614 Bacteria 7698
17 Ga0068852_100045714 3300005616 Bacteria 3726
18 Ga0081455_10001972 3300005937 Bacteria 24552
19 Ga0081538_10012383 3300005981 Bacteria 6837
20 Ga0070717_10000017 3300006028 Bacteria 205340
21 Ga0070712_100000002 3300006175 Bacteria 288475
22 Ga0097621_100086872 3300006237 Bacteria 2611
23 Ga0075431_100033772 3300006847 Bacteria 5271
24 Ga0075433_10106231 3300006852 Bacteria 2488
25 Ga0105240_10006990 3300009093 Bacteria 16481
26 Ga0111539_10042517 3300009094 Bacteria 5456
27 Ga0105241_10034778 3300009174 Bacteria 3788
28 Ga0105239_10128790 3300010375 Bacteria 2814
29 Ga0206356_11651197 3300020070 Bacteria 1924
30 Ga0206349_1294275 3300020075 Bacteria 2303
31 Ga0206351_10279872 3300020077 Bacteria 2422
32 Ga0206351_10499122 3300020077 Bacteria 1969
33 Ga0213873_10000115 3300021358 Bacteria 15453
34 Ga0213874_10001080 3300021377 Bacteria 5588
35 Ga0213874_10001912 3300021377 Bacteria 4380
36 Ga0213876_10000335 3300021384 Bacteria 41057
37 Ga0213876_10007822 3300021384 Bacteria 5799
38 Ga0213875_10005548 3300021388 Bacteria 6756
39 Ga0213875_10015225 3300021388 Bacteria 3745
40 Ga0224712_10029230 3300022467 Bacteria 1978
41 Ga0207695_10000061 3300025913 Bacteria 359827
42 Ga0207693_10000027 3300025915 Bacteria 120643
43 Ga0207660_10008280 3300025917 Bacteria 6720
44 Ga0207652_10000283 3300025921 Bacteria 52945
45 Ga0207652_10000735 3300025921 Bacteria 31707
46 Ga0207664_10088412 3300025929 Bacteria 2535
47 Ga0207665_10035632 3300025939 Bacteria 3304
48 Ga0207661_10000816 3300025944 Bacteria 20401
49 Ga0207678_10000710 3300026067 Bacteria 30416
50 Ga0207698_10110904 3300026142 Bacteria 2299
51 Ga0268266_10000168 3300028379 Bacteria 119675
52 Ga0268266_10001884 3300028379 Bacteria 23688
53 Ga0307416_100027250 3300032002 Bacteria 4228
54 Ga0373945_0005910 3300035116 Bacteria 3930
55 Ga0373943_0019756 3300035170 Bacteria 3101
56 Ga0373935_0005680 3300035692 Bacteria 7363
57 Ga0373925_0025491 3300037068 Bacteria 4320
58 Ga0395899_0010750 3300037312 Bacteria 7018
59 Ga0395899_0047055 3300037312 Bacteria 3212
60 Ga0395898_0062413 3300037466 Bacteria 3618
61 Ga0436364_0534028 3300037853 Bacteria 13265
62 Ga0436364_0618699 3300037853 Bacteria 11324
63 Ga0436364_0779164 3300037853 Bacteria 24601
64 Ga0436364_0867763 3300037853 Bacteria 1941
65 Ga0436364_1366190 3300037853 Bacteria 13513
66 Ga0436364_1413481 3300037853 Bacteria 6295
67 Ga0395901_0026523 3300038443 Bacteria 5949
68 Ga0395901_0060390 3300038443 Bacteria 3945
69 Ga0436365_0119816 3300039437 Bacteria 5735
70 Ga0436365_0219192 3300039437 Bacteria 103034
71 Ga0436365_0321576 3300039437 Bacteria 3951
72 Ga0436365_0474613 3300039437 Bacteria 4723
73 Ga0436365_0558720 3300039437 Bacteria 2445
74 Ga0436365_0996884 3300039437 Bacteria 6753
75 Ga0436365_1168763 3300039437 Bacteria 90017
76 Ga0436365_1757483 3300039437 Bacteria 8796
77 Ga0436361_0513480 3300039447 Bacteria 3493
78 Ga0436363_0627682 3300039450 Bacteria 16337
79 Ga0436363_0654155 3300039450 Bacteria 35800
80 Ga0436363_1502575 3300039450 Bacteria 10809
81 Ga0436362_0917818 3300039453 Bacteria 2200
82 Ga0436362_1210136 3300039453 Bacteria 10757
83 Ga0466969_0033330 3300044656 Bacteria 2616
84 Ga0466966_0030853 3300044684 Bacteria 3477
85 Ga0466966_0064081 3300044684 Bacteria 2315
86 Ga0466966_0078800 3300044684 Bacteria 2054
87 Ga0466961_0008451 3300044693 Bacteria 6557
88 Ga0466961_0040011 3300044693 Bacteria 3005
89 Ga0466963_0000318 3300044694 Bacteria 21719
90 Ga0466963_0001331 3300044694 Bacteria 13156
91 Ga0466963_0006030 3300044694 Bacteria 7143
92 Ga0466971_0027663 3300044719 Bacteria 2540
93 Ga0466968_0038011 3300044735 Bacteria 2022
94 Ga0466970_0016680 3300044765 Bacteria 3790
95 Ga0466957_0005028 3300044842 Bacteria 7403
96 Ga0466959_0003430 3300045049 Bacteria 10368
97 Ga0466959_0003706 3300045049 Bacteria 10085
98 Ga0466959_0004539 3300045049 Bacteria 9310
99 Ga0466959_0008841 3300045049 Bacteria 7138
100 Ga0466959_0012513 3300045049 Bacteria 6134
101 Ga0466959_0021912 3300045049 Bacteria 4719
102 Ga0466959_0052926 3300045049 Bacteria 2971
103 Ga0466958_0000789 3300045836 Bacteria 13950
104 Ga0466958_0006566 3300045836 Bacteria 6340
105 Ga0466958_0012666 3300045836 Bacteria 4781
106 Ga0466958_0015107 3300045836 Bacteria 4418
107 Ga0466958_0022959 3300045836 Bacteria 3658
108 Ga0466967_0003066 3300045976 Bacteria 10729
109 Ga0466967_0067871 3300045976 Bacteria 3182
110 Ga0466967_0078929 3300045976 Bacteria 2966
111 Ga0495603_0001600 3300046455 Bacteria 13283
112 Ga0495641_0012268 3300046461 Bacteria 4805
113 Ga0495651_0001417 3300046462 Bacteria 18602
114 Ga0495653_0012220 3300046463 Bacteria 7005
115 Ga0495594_0002000 3300046499 Bacteria 10619
116 Ga0495618_0021424 3300046514 Bacteria 3985
117 Ga0495628_0028503 3300046516 Bacteria 4536
118 Ga0495667_0016731 3300046559 Bacteria 4953
119 Ga0495588_0000417 3300046674 Bacteria 23054
120 Ga0495600_0003087 3300046809 Bacteria 9737
121 Ga0495676_0015355 3300047321 Bacteria 6822
122 Ga0495680_0030180 3300047322 Bacteria 4429
123 Ga0496100_0000703 3300048903 Bacteria 15970
124 Ga0496101_0015135 3300048904 Bacteria 5192
125 Ga0496103_0036741 3300048906 Bacteria 3000
126 Ga0496104_0000010 3300048907 Bacteria 475255
127 Ga0496104_0003229 3300048907 Bacteria 14032
128 Ga0496104_0023558 3300048907 Bacteria 5661
129 Ga0496104_0041607 3300048907 Bacteria 4310
130 Ga0496105_0000005 3300048908 Bacteria 475797
131 Ga0496105_0000042 3300048908 Bacteria 114886
132 Ga0496107_0049734 3300048910 Bacteria 3021
133 Ga0496108_0000055 3300048911 Bacteria 125202
134 Ga0496108_0009617 3300048911 Bacteria 7837
135 Ga0496109_0000043 3300048912 Bacteria 134649
136 Ga0496110_0000135 3300048913 Bacteria 42562
137 Ga0496110_0053409 3300048913 Bacteria 3552
138 Ga0496112_0000006 3300048915 Bacteria 365227
139 Ga0496112_0000199 3300048915 Bacteria 39311
140 Ga0496112_0000894 3300048915 Bacteria 21457
141 Ga0496112_0047420 3300048915 Bacteria 4215
142 Ga0496113_0000110 3300048916 Bacteria 35203
143 Ga0496113_0018455 3300048916 Bacteria 4859
144 Ga0496113_0020671 3300048916 Bacteria 4633
145 Ga0496115_0046086 3300048918 Bacteria 3483
146 Ga0496119_0010001 3300048922 Bacteria 8033
147 Ga0501043_0126173 3300049579 Bacteria 2007
148 Ga0501047_0043997 3300049581 Bacteria 4312
149 Ga0501074_0036026 3300049590 Bacteria 3585
150 nmdc:mga05p37_169109_c1 3300050507 Bacteria 2667
151 nmdc:mga08y16_60635_c1 3300050511 Bacteria 3951
152 nmdc:mga08y16_65691_c1 3300050511 Bacteria 3787
153 nmdc:mga0n895_126870_c1 3300050512 Bacteria 2576
154 nmdc:mga0rr50_41674_c1 3300050513 Bacteria 3348
155 nmdc:mga0a205_44233_c1 3300050515 Bacteria 4292
156 Ga0495612_0001725 3300053078 Bacteria 8983
157 Ga0495619_0022338 3300053085 Bacteria 4047
158 Ga0466962_0000839 3300061719 Bacteria 13871
159 Ga0213875_10009193
160 Ga0065715_10116557
161 Ga0070683_100000842
162 Ga0070680_100015243
163 Ga0070667_100020344
164 Ga0070714_100082323
165 Ga0070713_100100488
166 Ga0070710_10027099
167 Ga0070663_100000139
168 Ga0070678_100016229
169 Ga0070679_100000202
170 Ga0070679_100001374
171 Ga0068853_100004747
172 Ga0070665_100000352
173 Ga0070665_100005362
174 Ga0068856_100014203
175 Ga0068852_100045714
176 Ga0081455_10001972
177 Ga0081538_10012383
178 Ga0070717_10000017
179 Ga0070712_100000002
180 Ga0097621_100086872
181 Ga0075431_100033772
182 Ga0075433_10106231
183 Ga0105240_10006990
184 Ga0111539_10042517
185 Ga0105241_10034778
186 Ga0105239_10128790
187 Ga0206356_11651197
188 Ga0206349_1294275
189 Ga0206351_10279872
190 Ga0206351_10499122
191 Ga0213873_10000115
192 Ga0213874_10001080
193 Ga0213874_10001912
194 Ga0213876_10000335
195 Ga0213876_10007822
196 Ga0213875_10005548
197 Ga0213875_10015225
198 Ga0224712_10029230
199 Ga0207695_10000061
200 Ga0207693_10000027
201 Ga0207660_10008280
202 Ga0207652_10000283
203 Ga0207652_10000735
204 Ga0207664_10088412
205 Ga0207665_10035632
206 Ga0207661_10000816
207 Ga0207678_10000710
208 Ga0207698_10110904
209 Ga0268266_10000168
210 Ga0268266_10001884
211 Ga0307416_100027250
212 Ga0373945_0005910
213 Ga0373943_0019756
214 Ga0373935_0005680
215 Ga0373925_0025491
216 Ga0395899_0010750
217 Ga0395899_0047055
218 Ga0395898_0062413
219 Ga0436364_0534028
220 Ga0436364_0618699
221 Ga0436364_0779164
222 Ga0436364_0867763
223 Ga0436364_1366190
224 Ga0436364_1413481
225 Ga0395901_0026523
226 Ga0395901_0060390
227 Ga0436365_0119816
228 Ga0436365_0219192
229 Ga0436365_0321576
230 Ga0436365_0474613
231 Ga0436365_0558720
232 Ga0436365_0996884
233 Ga0436365_1168763
234 Ga0436365_1757483
235 Ga0436361_0513480
236 Ga0436363_0627682
237 Ga0436363_0654155
238 Ga0436363_1502575
239 Ga0436362_0917818
240 Ga0436362_1210136
241 Ga0466969_0033330
242 Ga0466966_0030853
243 Ga0466966_0064081
244 Ga0466966_0078800
245 Ga0466961_0008451
246 Ga0466961_0040011
247 Ga0466963_0000318
248 Ga0466963_0001331
249 Ga0466963_0006030
250 Ga0466971_0027663
251 Ga0466968_0038011
252 Ga0466970_0016680
253 Ga0466957_0005028
254 Ga0466959_0003430
255 Ga0466959_0003706
256 Ga0466959_0004539
257 Ga0466959_0008841
258 Ga0466959_0012513
259 Ga0466959_0021912
260 Ga0466959_0052926
261 Ga0466958_0000789
262 Ga0466958_0006566
263 Ga0466958_0012666
264 Ga0466958_0015107
265 Ga0466958_0022959
266 Ga0466967_0003066
267 Ga0466967_0067871
268 Ga0466967_0078929
269 Ga0495603_0001600
270 Ga0495641_0012268
271 Ga0495651_0001417
272 Ga0495653_0012220
273 Ga0495594_0002000
274 Ga0495618_0021424
275 Ga0495628_0028503
276 Ga0495667_0016731
277 Ga0495588_0000417
278 Ga0495600_0003087
279 Ga0495676_0015355
280 Ga0495680_0030180
281 Ga0496100_0000703
282 Ga0496101_0015135
283 Ga0496103_0036741
284 Ga0496104_0000010
285 Ga0496104_0003229
286 Ga0496104_0023558
287 Ga0496104_0041607
288 Ga0496105_0000005
289 Ga0496105_0000042
290 Ga0496107_0049734
291 Ga0496108_0000055
292 Ga0496108_0009617
293 Ga0496109_0000043
294 Ga0496110_0000135
295 Ga0496110_0053409
296 Ga0496112_0000006
297 Ga0496112_0000199
298 Ga0496112_0000894
299 Ga0496112_0047420
300 Ga0496113_0000110
301 Ga0496113_0018455
302 Ga0496113_0020671
303 Ga0496115_0046086
304 Ga0496119_0010001
305 Ga0501043_0126173
306 Ga0501047_0043997
307 Ga0501074_0036026
308 nmdc:mga05p37_169109_c1
309 nmdc:mga08y16_60635_c1
310 nmdc:mga08y16_65691_c1
311 nmdc:mga0n895_126870_c1
312 nmdc:mga0rr50_41674_c1
313 nmdc:mga0a205_44233_c1
314 Ga0495612_0001725
315 Ga0495619_0022338
316 Ga0466962_0000839

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02776

TPP_enzyme_N

Thiamine pyrophosphate enzyme, N-terminal TPP binding domain

3

121

0.96

PF02775

TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

380

535

0.94

PF00205

TPP_enzyme_M

Thiamine pyrophosphate enzyme, central domain

199

320

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3eya-assembly2.cif.gz_G structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli 0.9463 1 553
3eya-assembly1.cif.gz_B structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli 0.9455 1 549
3eya-assembly2.cif.gz_G structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli 0.9445 1 553
3eya-assembly3.cif.gz_K structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli 0.9419 1 549
3eya-assembly1.cif.gz_A structural basis for membrane binding and catalytic activation of the peripheral membrane enzyme pyruvate oxidase from escherichia coli 0.9382 1 558
ID Description Score Start End Superfamily
af_Q2FV86_182_336_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9703 190 342 3.40.50.1220
af_O53554_1_171_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9652 3 167 3.40.50.970
1y9dB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9595 3 168 3.40.50.970
3eyaI01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9589 1 171 3.40.50.970
af_Q2FV86_1_181_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9576 1 167 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A3T1DX88-F1-model_v4 deleted 0.9901 253 347
AF-X1MXU9-F1-model_v4 Thiamine pyrophosphate enzyme N-terminal TPP-binding domain-containing protein 0.988 3 174 GO:0030976
AF-A0A7W0LVG2-F1-model_v4 Thiamine pyrophosphate-requiring protein 0.9863 1 325 GO:0000287
GO:0030976
AF-X1MXU9-F1-model_v4 Thiamine pyrophosphate enzyme N-terminal TPP-binding domain-containing protein 0.9823 3 174 GO:0030976
AF-A0A6P1PZU0-F1-model_v4 Thiamine pyrophosphate-containing protein YdaP 0.982 1 543 GO:0000287
GO:0003824
GO:0019752
GO:0030976

Map