F225595

General Info

Members Datasets Scaffolds Average Seq Length
156 121 312 704

Family's Representative Sequence

Representative Sequence 3300046477|Ga0495664_0033786|Ga0495664_0033786_466_2967
Length 833
Sequence MKKNLVVYLTVTFAILFGSFTLATSQTVDASNPRTVQTTSSVSQQDWPVYGGQLANDHYSPLAQIDKTNVGQLKIAWTYDSHEKGGLQTSPLVVGRVIYAYTPSQKVIALDGASGKLLWVFDSGIKGTQPARGLTWWSQGSKKRLFAGVMNFLYALDPSTGRPIKTFGEGGRIDLRKNLRGDYLQQSIALTSPGIIFNDLIIVGGRNPETHPSPPGDIRAFDVRTGAMKWSFHTIPHPGEAGYETWPKDAWMRSGAANNWVGMALDSKRGIVYVPTGSAVSDFYGADRVGNNLFADTLLALDAKTGKLIWHFQGVHHDIWDRDFPSPPSLLTVVHDGHPVDAVAQTTKQGYLYLFDRVTGKPLFPIKEESFPNSNVPGEITSPTQPRPLVPEPFARQLLSADGLTKRTPDAHDFSLTRFKTFRSEGAFVPLSANRPTVIFPGFDGGAEWGGSAVDVDRGVIFVNANEMAWTGSLSDKGIDSPGESIYATLCVSCHGEHKEGSPPAFPSLVGIERRLSDKQIIDTIRAGKGRMPASPALGEDKLGPLLEYLKSNEPGNIVGSQAVRSGPREKQEMASEPQVLTPVADSSSDDPIGARSYTSNCSVCHGKHREGRAPAIPALLGLGNQLPRQKIAATIHSGKGAMPAFPWIKGEELSSLLRYLASGDQRSSTTAAPPSPKYRFTGYRKFLDSDGYPAIAPPWGTLNAIDLNTGEYLWKIPLGEYPELAATGLKDTGTENYGGPIVTAGGIVFIGATVYDRKVRAFDSATGAQLWEATLPFAATATPATYMIDGTQYIVIAAGGGKDLKSPSGGTYVAFALRQNIKRKAAQTRKRF

Samples

Sample ID Description Type Environment
1 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
68 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
69 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
74 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
75 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
76 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
77 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
78 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
79 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
82 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
83 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
86 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
87 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
91 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
92 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
93 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
94 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
95 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
96 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
97 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
98 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
99 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
100 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
101 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
102 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
103 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
104 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
105 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
108 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
109 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
112 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
113 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
114 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
115 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
116 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
117 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
118 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
119 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
120 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
121 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.13
Nodule 0
Rhizoplane 1.92
Rhizosphere 79.49
Stem 0
Stem Tuber 0
Unclassified 6.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495664_0033786 3300046477 Bacteria 3007
2 LJNas_1000627 3300000546 Bacteria 5983
3 JGI24741J21665_1000827 3300001915 Bacteria 9303
4 JGI24740J21852_10006199 3300001979 Bacteria 4981
5 JGI24737J22298_10002620 3300001990 Bacteria 6362
6 rootL2_10113411 3300003322 Bacteria 5744
7 Ga0065707_10083829 3300005295 Bacteria 8161
8 Ga0070658_10000824 3300005327 Bacteria 26537
9 Ga0070690_100010130 3300005330 Bacteria 5476
10 Ga0070670_100056002 3300005331 Bacteria 3384
11 Ga0070682_100029913 3300005337 Bacteria 3283
12 Ga0070689_100005504 3300005340 Bacteria 8657
13 Ga0070675_100010386 3300005354 Bacteria 7272
14 Ga0070675_100067310 3300005354 Bacteria 2964
15 Ga0070673_100071127 3300005364 Bacteria 2794
16 Ga0070705_100006503 3300005440 Bacteria 5734
17 Ga0070705_100029259 3300005440 Bacteria 3027
18 Ga0070663_100003422 3300005455 Bacteria 9158
19 Ga0068867_100028222 3300005459 Bacteria 4040
20 Ga0070698_100006189 3300005471 Bacteria 13031
21 Ga0070699_100059890 3300005518 Unclassified 3298
22 Ga0070684_100009431 3300005535 Bacteria 7686
23 Ga0068853_100088403 3300005539 Bacteria 2720
24 Ga0070672_100008995 3300005543 Bacteria 6865
25 Ga0070665_100061489 3300005548 Bacteria 3765
26 Ga0070704_100040717 3300005549 Unclassified 3201
27 Ga0068855_100039721 3300005563 Bacteria 5586
28 Ga0070664_100011772 3300005564 Bacteria 7101
29 Ga0070702_100023780 3300005615 Bacteria 3260
30 Ga0068861_100007612 3300005719 Bacteria 7432
31 Ga0068861_100008719 3300005719 Bacteria 6978
32 Ga0068861_100051240 3300005719 Bacteria 3133
33 Ga0068858_100025019 3300005842 Bacteria 5556
34 Ga0068862_100010425 3300005844 Bacteria 7673
35 Ga0068862_100025104 3300005844 Bacteria 5003
36 Ga0075428_100003968 3300006844 Bacteria 16239
37 Ga0075434_100008019 3300006871 Bacteria 9786
38 Ga0075434_100034246 3300006871 Bacteria 5015
39 Ga0075429_100008072 3300006880 Bacteria 9150
40 Ga0068865_100020131 3300006881 Bacteria 4326
41 Ga0075435_100006957 3300007076 Bacteria 8029
42 Ga0111539_10001150 3300009094 Bacteria 34964
43 Ga0105248_10000027 3300009177 Bacteria 255822
44 Ga0105248_10000826 3300009177 Bacteria 34800
45 Ga0105249_10035426 3300009553 Bacteria 4527
46 Ga0157370_10105129 3300013104 Bacteria 2643
47 Ga0157369_10013081 3300013105 Bacteria 9395
48 Ga0157372_10078732 3300013307 Bacteria 3725
49 Ga0157380_10003324 3300014326 Bacteria 11035
50 Ga0157376_10009400 3300014969 Bacteria 7102
51 Ga0157376_10023872 3300014969 Bacteria 4794
52 Ga0207697_10013169 3300025315 Bacteria 3453
53 Ga0207682_10004254 3300025893 Bacteria 6042
54 Ga0207647_10023529 3300025904 Bacteria 4073
55 Ga0207645_10036393 3300025907 Bacteria 3160
56 Ga0207643_10017598 3300025908 Bacteria 3909
57 Ga0207705_10000016 3300025909 Bacteria 377359
58 Ga0207705_10018510 3300025909 Bacteria 4980
59 Ga0207660_10051324 3300025917 Bacteria 2932
60 Ga0207662_10019903 3300025918 Bacteria 3825
61 Ga0207681_10006026 3300025923 Bacteria 7437
62 Ga0207659_10024319 3300025926 Unclassified 4057
63 Ga0207691_10000963 3300025940 Bacteria 28578
64 Ga0207691_10001467 3300025940 Bacteria 23516
65 Ga0207691_10004378 3300025940 Bacteria 13693
66 Ga0207691_10037946 3300025940 Unclassified 4459
67 Ga0207711_10000036 3300025941 Bacteria 176168
68 Ga0207711_10001054 3300025941 Bacteria 26394
69 Ga0207689_10030233 3300025942 Bacteria 4514
70 Ga0207689_10059312 3300025942 Bacteria 3148
71 Ga0207679_10010907 3300025945 Bacteria 5860
72 Ga0207639_10067543 3300026041 Bacteria 2782
73 Ga0207678_10008073 3300026067 Bacteria 9280
74 Ga0207708_10004879 3300026075 Bacteria 9894
75 Ga0207708_10016443 3300026075 Bacteria 5563
76 Ga0207648_10004424 3300026089 Bacteria 14423
77 Ga0207676_10006825 3300026095 Bacteria 8086
78 Ga0207676_10030399 3300026095 Bacteria 4055
79 Ga0207675_100001198 3300026118 Bacteria 25855
80 Ga0207675_100002019 3300026118 Bacteria 20228
81 Ga0207675_100006174 3300026118 Bacteria 11383
82 Ga0207675_100063042 3300026118 Bacteria 3463
83 Ga0207428_10009804 3300027907 Bacteria 8581
84 Ga0207428_10052389 3300027907 Bacteria 3259
85 Ga0268266_10003884 3300028379 Bacteria 14557
86 Ga0268265_10002222 3300028380 Bacteria 14919
87 Ga0265338_10005092 3300028800 Bacteria 17346
88 Ga0307513_10059879 3300031456 Bacteria 4040
89 Ga0307509_10003340 3300031507 Bacteria 24540
90 Ga0307408_100023349 3300031548 Bacteria 4212
91 Ga0307406_10048070 3300031901 Bacteria 2692
92 Ga0307416_100048782 3300032002 Bacteria 3362
93 Ga0307411_10005547 3300032005 Bacteria 6211
94 Ga0307411_10017487 3300032005 Bacteria 4087
95 Ga0307510_10000003 3300033180 Bacteria 756654
96 Ga0373953_0039403 3300035117 Unclassified 1872
97 Ga0373956_0001781 3300035119 Bacteria 8878
98 Ga0373957_0004949 3300035120 Unclassified 4100
99 Ga0373955_0002001 3300035172 Bacteria 8796
100 Ga0373933_0000975 3300035724 Bacteria 17482
101 Ga0395900_0018020 3300037418 Bacteria 7210
102 Ga0436360_0802331 3300039438 Bacteria 6066
103 Ga0436361_0062840 3300039447 Bacteria 10781
104 Ga0436361_0529955 3300039447 Bacteria 8936
105 Ga0436361_0978894 3300039447 Bacteria 2646
106 Ga0451791_1854225 3300041451 Bacteria 3080
107 Ga0451576_0057394 3300045051 Bacteria 4069
108 Ga0495590_0000707 3300046457 Bacteria 15267
109 Ga0495653_0026432 3300046463 Unclassified 4654
110 Ga0495583_0021848 3300046506 Bacteria 3282
111 Ga0495587_0001650 3300046536 Bacteria 14891
112 Ga0495645_0005809 3300046543 Bacteria 8514
113 Ga0495667_0028828 3300046559 Unclassified 3739
114 Ga0495669_0010234 3300046684 Bacteria 3962
115 Ga0495604_0000171 3300047317 Bacteria 57216
116 Ga0495672_0009768 3300047320 Bacteria 6912
117 Ga0495602_0067549 3300048088 Bacteria 3075
118 Ga0496102_0006883 3300048905 Bacteria 9704
119 Ga0496112_0026769 3300048915 Bacteria 5555
120 Ga0496117_0000316 3300048920 Bacteria 84475
121 Ga0496118_0000003 3300048921 Bacteria 773148
122 Ga0496119_0000232 3300048922 Bacteria 78129
123 Ga0496119_0000399 3300048922 Bacteria 59637
124 Ga0496119_0011165 3300048922 Bacteria 7479
125 Ga0496119_0020742 3300048922 Bacteria 4775
126 Ga0496120_0000061 3300048923 Bacteria 172817
127 Ga0496120_0000074 3300048923 Bacteria 164098
128 Ga0496120_0001165 3300048923 Bacteria 33650
129 Ga0496120_0016388 3300048923 Bacteria 4843
130 Ga0496121_0031443 3300048924 Unclassified 4849
131 Ga0496121_0040151 3300048924 Bacteria 4109
132 Ga0496121_0080622 3300048924 Bacteria 2579
133 Ga0496125_0009566 3300048928 Bacteria 9931
134 Ga0496126_0006461 3300048929 Bacteria 13062
135 Ga0496126_0012528 3300048929 Bacteria 8680
136 Ga0496126_0023771 3300048929 Bacteria 5932
137 Ga0501068_0004251 3300049584 Bacteria 7772
138 Ga0501070_0017151 3300049586 Bacteria 6078
139 Ga0501073_0011360 3300049589 Bacteria 6514
140 Ga0501073_0030676 3300049589 Unclassified 3838
141 Ga0501075_0063452 3300049591 Bacteria 2785
142 Ga0501077_0004450 3300049593 Bacteria 8514
143 Ga0501079_0001047 3300049741 Bacteria 19153
144 Ga0501080_0018767 3300049742 Bacteria 6401
145 Ga0501083_0018295 3300049744 Bacteria 4884
146 nmdc:mga05p37_16514_c1 3300050507 Bacteria 8893
147 nmdc:mga08y16_15841_c1 3300050511 Bacteria 7923
148 nmdc:mga0n895_58041_c1 3300050512 Bacteria 3816
149 Ga0500643_000536 3300053087 Bacteria 26520
150 Ga0500644_0015704 3300053088 Bacteria 2166
151 Ga0500641_0000141 3300053096 Bacteria 26513
152 Ga0500641_0002507 3300053096 Bacteria 6492
153 Ga0500564_003954 3300053138 Bacteria 5851
154 Ga0500567_001159 3300053723 Bacteria 10347
155 Ga0500625_000012 3300053729 Bacteria 127269
156 Ga0500645_000997 3300053730 Bacteria 15961
157 Ga0495664_0033786
158 LJNas_1000627
159 JGI24741J21665_1000827
160 JGI24740J21852_10006199
161 JGI24737J22298_10002620
162 rootL2_10113411
163 Ga0065707_10083829
164 Ga0070658_10000824
165 Ga0070690_100010130
166 Ga0070670_100056002
167 Ga0070682_100029913
168 Ga0070689_100005504
169 Ga0070675_100010386
170 Ga0070675_100067310
171 Ga0070673_100071127
172 Ga0070705_100006503
173 Ga0070705_100029259
174 Ga0070663_100003422
175 Ga0068867_100028222
176 Ga0070698_100006189
177 Ga0070699_100059890
178 Ga0070684_100009431
179 Ga0068853_100088403
180 Ga0070672_100008995
181 Ga0070665_100061489
182 Ga0070704_100040717
183 Ga0068855_100039721
184 Ga0070664_100011772
185 Ga0070702_100023780
186 Ga0068861_100007612
187 Ga0068861_100008719
188 Ga0068861_100051240
189 Ga0068858_100025019
190 Ga0068862_100010425
191 Ga0068862_100025104
192 Ga0075428_100003968
193 Ga0075434_100008019
194 Ga0075434_100034246
195 Ga0075429_100008072
196 Ga0068865_100020131
197 Ga0075435_100006957
198 Ga0111539_10001150
199 Ga0105248_10000027
200 Ga0105248_10000826
201 Ga0105249_10035426
202 Ga0157370_10105129
203 Ga0157369_10013081
204 Ga0157372_10078732
205 Ga0157380_10003324
206 Ga0157376_10009400
207 Ga0157376_10023872
208 Ga0207697_10013169
209 Ga0207682_10004254
210 Ga0207647_10023529
211 Ga0207645_10036393
212 Ga0207643_10017598
213 Ga0207705_10000016
214 Ga0207705_10018510
215 Ga0207660_10051324
216 Ga0207662_10019903
217 Ga0207681_10006026
218 Ga0207659_10024319
219 Ga0207691_10000963
220 Ga0207691_10001467
221 Ga0207691_10004378
222 Ga0207691_10037946
223 Ga0207711_10000036
224 Ga0207711_10001054
225 Ga0207689_10030233
226 Ga0207689_10059312
227 Ga0207679_10010907
228 Ga0207639_10067543
229 Ga0207678_10008073
230 Ga0207708_10004879
231 Ga0207708_10016443
232 Ga0207648_10004424
233 Ga0207676_10006825
234 Ga0207676_10030399
235 Ga0207675_100001198
236 Ga0207675_100002019
237 Ga0207675_100006174
238 Ga0207675_100063042
239 Ga0207428_10009804
240 Ga0207428_10052389
241 Ga0268266_10003884
242 Ga0268265_10002222
243 Ga0265338_10005092
244 Ga0307513_10059879
245 Ga0307509_10003340
246 Ga0307408_100023349
247 Ga0307406_10048070
248 Ga0307416_100048782
249 Ga0307411_10005547
250 Ga0307411_10017487
251 Ga0307510_10000003
252 Ga0373953_0039403
253 Ga0373956_0001781
254 Ga0373957_0004949
255 Ga0373955_0002001
256 Ga0373933_0000975
257 Ga0395900_0018020
258 Ga0436360_0802331
259 Ga0436361_0062840
260 Ga0436361_0529955
261 Ga0436361_0978894
262 Ga0451791_1854225
263 Ga0451576_0057394
264 Ga0495590_0000707
265 Ga0495653_0026432
266 Ga0495583_0021848
267 Ga0495587_0001650
268 Ga0495645_0005809
269 Ga0495667_0028828
270 Ga0495669_0010234
271 Ga0495604_0000171
272 Ga0495672_0009768
273 Ga0495602_0067549
274 Ga0496102_0006883
275 Ga0496112_0026769
276 Ga0496117_0000316
277 Ga0496118_0000003
278 Ga0496119_0000232
279 Ga0496119_0000399
280 Ga0496119_0011165
281 Ga0496119_0020742
282 Ga0496120_0000061
283 Ga0496120_0000074
284 Ga0496120_0001165
285 Ga0496120_0016388
286 Ga0496121_0031443
287 Ga0496121_0040151
288 Ga0496121_0080622
289 Ga0496125_0009566
290 Ga0496126_0006461
291 Ga0496126_0012528
292 Ga0496126_0023771
293 Ga0501068_0004251
294 Ga0501070_0017151
295 Ga0501073_0011360
296 Ga0501073_0030676
297 Ga0501075_0063452
298 Ga0501077_0004450
299 Ga0501079_0001047
300 Ga0501080_0018767
301 Ga0501083_0018295
302 nmdc:mga05p37_16514_c1
303 nmdc:mga08y16_15841_c1
304 nmdc:mga0n895_58041_c1
305 Ga0500643_000536
306 Ga0500644_0015704
307 Ga0500641_0000141
308 Ga0500641_0002507
309 Ga0500564_003954
310 Ga0500567_001159
311 Ga0500625_000012
312 Ga0500645_000997

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13442

Cytochrome_CBB3

Cytochrome C oxidase, cbb3-type, subunit III

590

661

0.9

PF13442

Cytochrome_CBB3

Cytochrome C oxidase, cbb3-type, subunit III

480

550

0.89

PF13360

PQQ_2

PQQ-like domain

63

166

0.81

PF13360

PQQ_2

PQQ-like domain

699

816

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
1k3g-assembly1.cif.gz_A nmr solution structure of oxidized cytochrome c-553 from bacillus pasteurii 0.8509 467 535
1c75-assembly1.cif.gz_A "0.97 a ""ab initio"" crystal structure of cytochrome c-553 from bacillus pasteurii" 0.8504 467 534
2yms-assembly1.cif.gz_B structure and assembly of a b-propeller with nine blades and a new conserved repetitive sequence motif 0.8392 16 116
7dxn-assembly2.cif.gz_B-2 plant growth-promoting factor yxal from bacillus velezensis 0.8204 27 247
2yms-assembly1.cif.gz_B structure and assembly of a b-propeller with nine blades and a new conserved repetitive sequence motif 0.8189 16 116
ID Description Score Start End Superfamily
1k3gA00 Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain 0.8509 467 535 1.10.760.10
af_Q5RG49_936_1023_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.8456 180 247 2.40.128.630
2ymsB00 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.8392 16 116 2.40.10.480
2ymsB00 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.8189 16 116 2.40.10.480
af_P15877_153_794_2.140.10.10 Mainly Beta;8 Propeller;Methanol Dehydrogenase; Chain A;Quinoprotein alcohol dehydrogenase-like superfamily 0.8107 2 689 2.140.10.10
ID Description Score Start End GO Terms
AF-A0A2V9Y1P3-F1-model_v4 Pyrrolo-quinoline quinone 0.9728 1 362 GO:0016491
AF-A0A6N8WLU6-F1-model_v4 deleted 0.9702 16 285
AF-A0A2V9IYW8-F1-model_v4 Pyrroloquinoline quinone-dependent dehydrogenase 0.9668 15 281 GO:0016491
AF-A0A519Q4Z9-F1-model_v4 Quinoprotein glucose dehydrogenase 0.9662 4 153 GO:0016020
GO:0016491
AF-A0A7Y1THX5-F1-model_v4 PQQ-binding-like beta-propeller repeat protein 0.9649 1 274 GO:0008876

Map