F225095

General Info

Members Datasets Scaffolds Average Seq Length
156 101 148 514

Family's Representative Sequence

Representative Sequence 3300028556|Ga0265337_1001401|Ga0265337_100140110
Length 545
Sequence MHIKSFAVIPVVGFICLGLGAGCSSPKPNSPVAQIQTPAVSQSQPPPLVPVVKTNRLVIHADQPGAEISRNIYGQFSEHLGHCIYGGVWVGEDSSIPNTRGIRNDVVAALKKIQVPVLRWPGGCFADEYHWMDGIGTPTNRPSMINTTWGGVTENNHFGTHEFMDFCDQIGAAPYIGGNLGSGTVEEMMQWVEYMTSGADSPLANLRRQNGRQQPWKVPYFAVGNESWGCGGNMTPEFYADNFRRYNTFIKNYGNNHIYRIASGASDTDYHWTEVLMKNAGHQMDGLSLHYYTLPTGNWSHKGSATAFTESEWHETLRRALLMDGMVTKHSAIMDKYDPQKRVGLIVDEWGAWYDVEPGTNPGFLYQQNTLRDALVAGVTLNIFNNHADRVKMANIAQMINVLQSMILTDNEKMTVTPSYWVFEMDTVHHDATLLPTELQSEDYAFGGKTVPEVSASASRDKAGKIHVTLCNLNPNQSAEIPCELPGAKVQKISGRVLTAPEMNAHNTFDQPDNVKPAEFSAFKVTDDGFITTLPAKSVVVLEIE

Samples

Sample ID Description Type Environment
1 2773857759 Microbacterium sp. 1294 Isolate Unclassified
2 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
3 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
4 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
5 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
6 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere
7 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
46 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
65 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
66 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
67 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
68 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
69 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
72 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
73 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
74 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
75 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
76 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
77 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
78 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
79 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
85 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
86 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
87 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
90 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
91 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
92 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
93 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
94 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
98 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
99 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
100 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
101 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.87
Metatranscriptomes 0
Isolates 5.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.28
Rhizosphere 92.95
Stem 0
Stem Tuber 0
Unclassified 5.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10114802 3300003320 Bacteria 3320
2 Ga0065704_10072044 3300005289 Bacteria 9307
3 Ga0065707_10002332 3300005295 Bacteria 5103
4 Ga0065707_10085912 3300005295 Bacteria 5798
5 Ga0070683_100006817 3300005329 Bacteria 9600
6 Ga0070683_100009166 3300005329 Bacteria 8447
7 Ga0070683_100044358 3300005329 Bacteria 4100
8 Ga0070670_100006419 3300005331 Bacteria 9953
9 Ga0070670_100136841 3300005331 Bacteria 2117
10 Ga0070680_100034477 3300005336 Bacteria 4080
11 Ga0070680_100135658 3300005336 Bacteria 2061
12 Ga0068868_100032539 3300005338 Bacteria 4012
13 Ga0070661_100105555 3300005344 Bacteria 2100
14 Ga0070675_100037816 3300005354 Bacteria 3933
15 Ga0070688_100019700 3300005365 Bacteria 3911
16 Ga0070659_100007045 3300005366 Bacteria 8143
17 Ga0070659_100138500 3300005366 Bacteria 1980
18 Ga0070667_100055586 3300005367 Bacteria 3342
19 Ga0070701_10010914 3300005438 Bacteria 4037
20 Ga0070700_100053796 3300005441 Bacteria 2514
21 Ga0070662_100004335 3300005457 Bacteria 8961
22 Ga0070681_10015606 3300005458 Bacteria 7564
23 Ga0070685_10039757 3300005466 Bacteria 2674
24 Ga0070679_100001613 3300005530 Bacteria 20280
25 Ga0070679_100003899 3300005530 Bacteria 13716
26 Ga0068855_100165607 3300005563 Bacteria 2506
27 Ga0070664_100012338 3300005564 Bacteria 6943
28 Ga0070664_100025916 3300005564 Bacteria 4861
29 Ga0070664_100116266 3300005564 Bacteria 2339
30 Ga0068857_100074125 3300005577 Bacteria 3033
31 Ga0068857_100121613 3300005577 Bacteria 2351
32 Ga0068859_100020712 3300005617 Bacteria 6598
33 Ga0068859_100090892 3300005617 Bacteria 3104
34 Ga0068863_100061296 3300005841 Bacteria 3556
35 Ga0075434_100005680 3300006871 Bacteria 11383
36 Ga0097620_100020712 3300006931 Bacteria 6598
37 Ga0097620_100090892 3300006931 Bacteria 3104
38 Ga0114129_10431740 3300009147 Bacteria 1731
39 Ga0105242_10013394 3300009176 Bacteria 6336
40 Ga0105248_10067040 3300009177 Bacteria 4029
41 Ga0105237_10215569 3300009545 Bacteria 1920
42 Ga0105249_10131752 3300009553 Bacteria 2388
43 Ga0105249_10133292 3300009553 Bacteria 2374
44 Ga0105239_10136697 3300010375 Bacteria 2729
45 Ga0157371_10004397 3300013102 Bacteria 12317
46 Ga0157371_10005158 3300013102 Bacteria 11130
47 Ga0157371_10006529 3300013102 Bacteria 9599
48 Ga0157371_10025963 3300013102 Bacteria 4262
49 Ga0157369_10042289 3300013105 Bacteria 4971
50 Ga0157369_10042705 3300013105 Bacteria 4945
51 Ga0163162_10128140 3300013306 Bacteria 2646
52 Ga0157372_10027662 3300013307 Bacteria 6179
53 Ga0157372_10030732 3300013307 Bacteria 5877
54 Ga0157377_10050288 3300014745 Bacteria 2346
55 Ga0157379_10016044 3300014968 Bacteria 6586
56 Ga0163161_10053002 3300017792 Bacteria 2941
57 Ga0207697_10004810 3300025315 Bacteria 6378
58 Ga0207645_10001354 3300025907 Bacteria 20118
59 Ga0207707_10004716 3300025912 Bacteria 11963
60 Ga0207662_10018770 3300025918 Bacteria 3927
61 Ga0207657_10009052 3300025919 Bacteria 10053
62 Ga0207657_10018690 3300025919 Bacteria 6605
63 Ga0207657_10050152 3300025919 Bacteria 3633
64 Ga0207649_10004159 3300025920 Bacteria 7881
65 Ga0207649_10029766 3300025920 Bacteria 3228
66 Ga0207649_10058437 3300025920 Bacteria 2415
67 Ga0207652_10000341 3300025921 Bacteria 48557
68 Ga0207652_10006857 3300025921 Bacteria 9180
69 Ga0207650_10008754 3300025925 Bacteria 6914
70 Ga0207659_10035906 3300025926 Bacteria 3429
71 Ga0207706_10000680 3300025933 Bacteria 35686
72 Ga0207661_10045563 3300025944 Bacteria 3472
73 Ga0207661_10058301 3300025944 Bacteria 3107
74 Ga0207661_10211578 3300025944 Bacteria 1709
75 Ga0207679_10000908 3300025945 Bacteria 18911
76 Ga0207679_10019930 3300025945 Bacteria 4517
77 Ga0207679_10048048 3300025945 Bacteria 3104
78 Ga0207712_10032136 3300025961 Bacteria 3541
79 Ga0207678_10073533 3300026067 Bacteria 2929
80 Ga0207708_10020935 3300026075 Bacteria 4934
81 Ga0207708_10059842 3300026075 Bacteria 2908
82 Ga0207676_10065488 3300026095 Bacteria 2894
83 Ga0207674_10109159 3300026116 Bacteria 2743
84 Ga0207675_100000174 3300026118 Bacteria 57684
85 Ga0265337_1000269 3300028556 Bacteria 28329
86 Ga0265337_1001401 3300028556 Bacteria 11833
87 Ga0265319_1000001 3300028563 Bacteria 549513
88 Ga0265318_10032666 3300028577 Bacteria 2013
89 Ga0265323_10000079 3300028653 Bacteria 54842
90 Ga0265323_10002407 3300028653 Bacteria 8605
91 Ga0265323_10010230 3300028653 Bacteria 3808
92 Ga0265323_10016960 3300028653 Bacteria 2836
93 Ga0265322_10001030 3300028654 Bacteria 9675
94 Ga0265336_10000586 3300028666 Bacteria 20502
95 Ga0265336_10015410 3300028666 Bacteria 2515
96 Ga0265338_10000053 3300028800 Bacteria 208184
97 Ga0265338_10001233 3300028800 Bacteria 42256
98 Ga0265338_10002727 3300028800 Bacteria 25922
99 Ga0265338_10003378 3300028800 Bacteria 22540
100 Ga0265338_10003885 3300028800 Bacteria 20670
101 Ga0265338_10088016 3300028800 Bacteria 2578
102 Ga0265324_10001152 3300029957 Bacteria 15790
103 Ga0316176_1112794 3300030732 Bacteria 1803
104 Ga0265320_10010426 3300031240 Bacteria 5538
105 Ga0265320_10010832 3300031240 Bacteria 5401
106 Ga0265320_10043313 3300031240 Bacteria 2226
107 Ga0265327_10000727 3300031251 Bacteria 51395
108 Ga0265316_10003554 3300031344 Bacteria 15719
109 Ga0265316_10020227 3300031344 Bacteria 5671
110 Ga0265316_10037316 3300031344 Bacteria 3924
111 Ga0265316_10072933 3300031344 Bacteria 2644
112 Ga0307513_10000005 3300031456 Bacteria 553227
113 Ga0316576_10013296 3300031727 Bacteria 5464
114 Ga0316576_10056540 3300031727 Bacteria 2866
115 Ga0316576_10059252 3300031727 Bacteria 2802
116 Ga0316576_10156959 3300031727 Bacteria 1715
117 Ga0316585_10015120 3300032137 Bacteria 2312
118 Ga0316582_0001922 3300036647 Bacteria 9481
119 Ga0395899_0037565 3300037312 Bacteria 3630
120 Ga0395900_0004215 3300037418 Bacteria 15261
121 Ga0395900_0010471 3300037418 Bacteria 9484
122 Ga0395900_0076352 3300037418 Bacteria 3443
123 Ga0395898_0088236 3300037466 Bacteria 2986
124 Ga0395901_0001660 3300038443 Bacteria 22981
125 Ga0395901_0043782 3300038443 Bacteria 4643
126 Ga0395901_0117655 3300038443 Bacteria 2792
127 Ga0400489_70477 3300039093 Bacteria 5497
128 Ga0439449_0005978 3300042007 Bacteria 4648
129 Ga0439457_000217 3300042014 Bacteria 15319
130 Ga0453684_0043401 3300044712 Bacteria 6043
131 Ga0453684_0046360 3300044712 Bacteria 5781
132 Ga0453684_0047200 3300044712 Bacteria 5715
133 Ga0453684_0080092 3300044712 Bacteria 4080
134 Ga0453684_0272199 3300044712 Bacteria 1935
135 Ga0451576_0070636 3300045051 Bacteria 3635
136 Ga0495629_0002318 3300046459 Bacteria 14659
137 Ga0495672_0002330 3300047320 Bacteria 17608
138 Ga0495675_0046099 3300047444 Bacteria 2776
139 Ga0496113_0062699 3300048916 Bacteria 2808
140 Ga0496114_0046027 3300048917 Bacteria 3625
141 Ga0496118_0118938 3300048921 Bacteria 1729
142 Ga0501034_0088373 3300049571 Bacteria 3097
143 Ga0501034_0097806 3300049571 Bacteria 2931
144 Ga0501038_0052610 3300049574 Bacteria 3510
145 Ga0501073_0090636 3300049589 Bacteria 2125
146 nmdc:mga06r32_234386_c1 3300050510 Bacteria 1823
147 nmdc:mga0n895_32104_c1 3300050512 Bacteria 5037
148 nmdc:mga0a205_229804_c1 3300050515 Bacteria 1738

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009147 Ga0114129_10431740 Ga0114129_104317402 417
2 3300050510 nmdc:mga06r32_234386_c1 nmdc:mga06r32_234386_c1_418_1806 435
3 3300031727 Ga0316576_10156959 Ga0316576_101569591 442
4 3300049574 Ga0501038_0052610 Ga0501038_0052610_423_1868 443
5 3300005336 Ga0070680_100135658 Ga0070680_1001356583 444
6 iso_pu_bacteria 2833709550 2833709622 449
7 3300031344 Ga0265316_10072933 Ga0265316_100729332 450
8 3300048916 Ga0496113_0062699 Ga0496113_0062699_34_1476 452
9 3300048917 Ga0496114_0046027 Ga0496114_0046027_2008_3450 452
10 3300013102 Ga0157371_10005158 Ga0157371_100051585 453
11 iso_pu_bacteria 2773857759 2774384378 457
12 iso_pu_bacteria 2977251589 2977254034 457
13 3300025315 Ga0207697_10004810 Ga0207697_100048102 459
14 3300048921 Ga0496118_0118938 Ga0496118_0118938_206_1675 461
15 3300005466 Ga0070685_10039757 Ga0070685_100397572 462
16 3300026075 Ga0207708_10020935 Ga0207708_100209355 462
17 3300005295 Ga0065707_10085912 Ga0065707_100859124 463
18 3300005338 Ga0068868_100032539 Ga0068868_1000325393 463
19 3300005365 Ga0070688_100019700 Ga0070688_1000197001 463
20 3300005438 Ga0070701_10010914 Ga0070701_100109142 463
21 3300005564 Ga0070664_100025916 Ga0070664_1000259163 463
22 3300005577 Ga0068857_100074125 Ga0068857_1000741252 463
23 3300005841 Ga0068863_100061296 Ga0068863_1000612962 463
24 3300013307 Ga0157372_10030732 Ga0157372_100307324 463
25 3300014745 Ga0157377_10050288 Ga0157377_100502882 463
26 3300025920 Ga0207649_10029766 Ga0207649_100297662 463
27 3300025945 Ga0207679_10000908 Ga0207679_100009085 463
28 3300026067 Ga0207678_10073533 Ga0207678_100735332 463
29 3300005329 Ga0070683_100044358 Ga0070683_1000443583 464
30 3300005457 Ga0070662_100004335 Ga0070662_1000043352 464
31 3300005563 Ga0068855_100165607 Ga0068855_1001656072 464
32 3300006871 Ga0075434_100005680 Ga0075434_1000056803 464
33 3300010375 Ga0105239_10136697 Ga0105239_101366972 464
34 3300013102 Ga0157371_10025963 Ga0157371_100259632 464
35 3300013306 Ga0163162_10128140 Ga0163162_101281402 464
36 3300014968 Ga0157379_10016044 Ga0157379_100160442 464
37 3300017792 Ga0163161_10053002 Ga0163161_100530022 464
38 3300025907 Ga0207645_10001354 Ga0207645_100013543 464
39 3300025918 Ga0207662_10018770 Ga0207662_100187702 464
40 3300025919 Ga0207657_10009052 Ga0207657_100090523 464
41 3300025933 Ga0207706_10000680 Ga0207706_1000068021 464
42 3300025944 Ga0207661_10058301 Ga0207661_100583012 464
43 3300025961 Ga0207712_10032136 Ga0207712_100321362 464
44 3300026118 Ga0207675_100000174 Ga0207675_10000017411 464
45 3300031727 Ga0316576_10056540 Ga0316576_100565402 464
46 3300047444 Ga0495675_0046099 Ga0495675_0046099_754_2283 464
47 3300050512 nmdc:mga0n895_32104_c1 nmdc:mga0n895_32104_c1_1648_3237 464
48 3300050515 nmdc:mga0a205_229804_c1 nmdc:mga0a205_229804_c1_23_1501 465
49 iso_pu_bacteria 2920107658 2920114848 465
50 3300005329 Ga0070683_100006817 Ga0070683_1000068175 466
51 3300005329 Ga0070683_100009166 Ga0070683_1000091667 466
52 3300005331 Ga0070670_100006419 Ga0070670_1000064193 466
53 3300005331 Ga0070670_100136841 Ga0070670_1001368412 466
54 3300005336 Ga0070680_100034477 Ga0070680_1000344773 466
55 3300005344 Ga0070661_100105555 Ga0070661_1001055551 466
56 3300005354 Ga0070675_100037816 Ga0070675_1000378163 466
57 3300005366 Ga0070659_100007045 Ga0070659_1000070459 466
58 3300005367 Ga0070667_100055586 Ga0070667_1000555863 466
59 3300005458 Ga0070681_10015606 Ga0070681_100156064 466
60 3300005530 Ga0070679_100003899 Ga0070679_1000038998 466
61 3300005564 Ga0070664_100012338 Ga0070664_1000123382 466
62 3300005564 Ga0070664_100116266 Ga0070664_1001162662 466
63 3300005577 Ga0068857_100121613 Ga0068857_1001216132 466
64 3300005617 Ga0068859_100020712 Ga0068859_1000207124 466
65 3300005617 Ga0068859_100090892 Ga0068859_1000908922 466
66 3300006931 Ga0097620_100020712 Ga0097620_1000207124 466
67 3300006931 Ga0097620_100090892 Ga0097620_1000908922 466
68 3300009176 Ga0105242_10013394 Ga0105242_100133944 466
69 3300009177 Ga0105248_10067040 Ga0105248_100670402 466
70 3300009553 Ga0105249_10131752 Ga0105249_101317522 466
71 3300013105 Ga0157369_10042289 Ga0157369_100422893 466
72 3300025912 Ga0207707_10004716 Ga0207707_100047164 466
73 3300025920 Ga0207649_10004159 Ga0207649_100041599 466
74 3300025920 Ga0207649_10058437 Ga0207649_100584372 466
75 3300025921 Ga0207652_10006857 Ga0207652_100068572 466
76 3300025925 Ga0207650_10008754 Ga0207650_100087545 466
77 3300025926 Ga0207659_10035906 Ga0207659_100359062 466
78 3300025944 Ga0207661_10045563 Ga0207661_100455636 466
79 3300025944 Ga0207661_10211578 Ga0207661_102115781 466
80 3300025945 Ga0207679_10019930 Ga0207679_100199302 466
81 3300025945 Ga0207679_10048048 Ga0207679_100480482 466
82 3300028653 Ga0265323_10010230 Ga0265323_100102302 466
83 3300028654 Ga0265322_10001030 Ga0265322_100010302 466
84 3300031251 Ga0265327_10000727 Ga0265327_1000072711 466
85 3300046459 Ga0495629_0002318 Ga0495629_0002318_93_1628 466
86 3300049571 Ga0501034_0097806 Ga0501034_0097806_1129_2700 466
87 3300049589 Ga0501073_0090636 Ga0501073_0090636_506_2077 466
88 3300005289 Ga0065704_10072044 Ga0065704_100720442 467
89 3300005295 Ga0065707_10002332 Ga0065707_100023322 467
90 3300026095 Ga0207676_10065488 Ga0207676_100654881 467
91 3300028556 Ga0265337_1000269 Ga0265337_100026916 467
92 3300028556 Ga0265337_1001401 Ga0265337_100140110 467
93 3300028563 Ga0265319_1000001 Ga0265319_1000001153 467
94 3300028577 Ga0265318_10032666 Ga0265318_100326662 467
95 3300028653 Ga0265323_10000079 Ga0265323_100000796 467
96 3300028653 Ga0265323_10002407 Ga0265323_100024072 467
97 3300028653 Ga0265323_10016960 Ga0265323_100169603 467
98 3300028666 Ga0265336_10000586 Ga0265336_1000058611 467
99 3300028666 Ga0265336_10015410 Ga0265336_100154103 467
100 3300028800 Ga0265338_10000053 Ga0265338_10000053106 467
101 3300028800 Ga0265338_10001233 Ga0265338_1000123313 467
102 3300028800 Ga0265338_10002727 Ga0265338_100027274 467
103 3300028800 Ga0265338_10003378 Ga0265338_100033783 467
104 3300028800 Ga0265338_10003885 Ga0265338_100038854 467
105 3300028800 Ga0265338_10088016 Ga0265338_100880162 467
106 3300029957 Ga0265324_10001152 Ga0265324_100011522 467
107 3300031240 Ga0265320_10010426 Ga0265320_100104262 467
108 3300031240 Ga0265320_10010832 Ga0265320_100108323 467
109 3300031344 Ga0265316_10003554 Ga0265316_100035545 467
110 3300031344 Ga0265316_10020227 Ga0265316_100202272 467
111 3300031344 Ga0265316_10037316 Ga0265316_100373163 467
112 3300031727 Ga0316576_10013296 Ga0316576_100132965 467
113 3300031727 Ga0316576_10059252 Ga0316576_100592523 467
114 3300032137 Ga0316585_10015120 Ga0316585_100151202 467
115 3300036647 Ga0316582_0001922 Ga0316582_0001922_1832_3397 467
116 3300039093 Ga0400489_70477 Ga0400489_70477_882_2450 467
117 3300044712 Ga0453684_0046360 Ga0453684_0046360_3557_5092 467
118 3300047320 Ga0495672_0002330 Ga0495672_0002330_4445_5989 467
119 3300005366 Ga0070659_100138500 Ga0070659_1001385001 468
120 3300009545 Ga0105237_10215569 Ga0105237_102155691 468
121 3300013102 Ga0157371_10004397 Ga0157371_100043973 468
122 3300013102 Ga0157371_10006529 Ga0157371_100065296 468
123 3300013105 Ga0157369_10042705 Ga0157369_100427055 468
124 3300013307 Ga0157372_10027662 Ga0157372_100276626 468
125 3300025919 Ga0207657_10018690 Ga0207657_100186902 468
126 3300026116 Ga0207674_10109159 Ga0207674_101091592 468
127 3300037418 Ga0395900_0010471 Ga0395900_0010471_811_2361 468
128 3300037418 Ga0395900_0076352 Ga0395900_0076352_313_1863 468
129 3300037466 Ga0395898_0088236 Ga0395898_0088236_54_1604 468
130 3300038443 Ga0395901_0043782 Ga0395901_0043782_2581_4131 468
131 3300038443 Ga0395901_0117655 Ga0395901_0117655_190_1740 468
132 3300044712 Ga0453684_0047200 Ga0453684_0047200_2123_3676 468
133 3300044712 Ga0453684_0272199 Ga0453684_0272199_410_1912 468
134 3300045051 Ga0451576_0070636 Ga0451576_0070636_1117_2673 468
135 3300049571 Ga0501034_0088373 Ga0501034_0088373_157_1707 468
136 3300005530 Ga0070679_100001613 Ga0070679_10000161318 469
137 3300025919 Ga0207657_10050152 Ga0207657_100501523 469
138 3300025921 Ga0207652_10000341 Ga0207652_1000034129 469
139 3300031240 Ga0265320_10043313 Ga0265320_100433131 469
140 3300037312 Ga0395899_0037565 Ga0395899_0037565_745_2304 469
141 3300037418 Ga0395900_0004215 Ga0395900_0004215_974_2533 469
142 3300038443 Ga0395901_0001660 Ga0395901_0001660_4208_5767 469
143 3300005441 Ga0070700_100053796 Ga0070700_1000537961 471
144 3300009553 Ga0105249_10133292 Ga0105249_101332921 471
145 3300026075 Ga0207708_10059842 Ga0207708_100598422 471
146 3300044712 Ga0453684_0043401 Ga0453684_0043401_3502_5019 474
147 3300044712 Ga0453684_0080092 Ga0453684_0080092_453_1970 475
148 iso_pu_bacteria 2884693830 2884700960 477
149 iso_pu_bacteria 2895442618 2895452322 477
150 iso_pu_bacteria 2895427314 2895438620 479
151 iso_pu_bacteria 8056054917 8056059041 479
152 3300003320 rootH2_10114802 rootH2_101148021 482
153 3300030732 Ga0316176_1112794 Ga0316176_11127941 482
154 3300031456 Ga0307513_10000005 Ga0307513_10000005351 482
155 3300042007 Ga0439449_0005978 Ga0439449_0005978_1069_2598 482
156 3300042014 Ga0439457_000217 Ga0439457_000217_11260_12789 482

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06964

Alpha-L-AF_C

Alpha-L-arabinofuranosidase C-terminal domain

348

538

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6d25-assembly1.cif.gz_B crystal structure of the gh51 arabinofuranosidase from xanthomonas axonopodis pv. citri 0.9354 4 480
2vrq-assembly2.cif.gz_B structure of an inactive mutant of arabinofuranosidase from thermobacillus xylanilyticus in complex with a pentasaccharide 0.9334 4 482
2vrk-assembly2.cif.gz_B structure of a seleno-methionyl derivative of wild type arabinofuranosidase from thermobacillus xylanilyticus 0.9283 4 482
6zt9-assembly1.cif.gz_A-2 x-ray structure of mutated arabinofuranosidase 0.928 3 482
6zt9-assembly1.cif.gz_C-2 x-ray structure of mutated arabinofuranosidase 0.926 3 482
ID Description Score Start End Superfamily
6d25A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9214 19 364 3.20.20.80
2vrkA01 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9004 365 482 2.60.40.1180
6d25A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8818 19 364 3.20.20.80
2c7fE01 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.8528 367 478 2.60.40.1180
3ug3C02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8382 19 363 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A2E9NHJ9-F1-model_v4 non-reducing end alpha-L-arabinofuranosidase (EC 3.2.1.55) 0.9837 250 482 GO:0000272
GO:0046373
GO:0046556
AF-A0A0M8KQL7-F1-model_v4 Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) 0.9796 325 482 GO:0000272
GO:0046373
GO:0046556
AF-A0A2E9NHJ9-F1-model_v4 non-reducing end alpha-L-arabinofuranosidase (EC 3.2.1.55) 0.9753 250 482 GO:0000272
GO:0046373
GO:0046556
AF-A0A197C1L4-F1-model_v4 deleted 0.9731 387 480
AF-A0A3D3H2W7-F1-model_v4 Alpha-L-arabinofuranosidase C-terminal domain-containing protein 0.9725 338 482 GO:0000272
GO:0046373
GO:0046556

Feature Viewer

pLDDT pTM Quality
88.13 0.91 High
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Predicted Structure (AlphaFold2)

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