F216323

General Info

Members Datasets Scaffolds Average Seq Length
153 109 306 130

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100060273|Ga0070708_1000602734
Length 146
Sequence MQTRSFPVTPDARSPAGAEIRYLMEGETGNMIHSTVPPGQVNRATVHATVSEFWHVLSGEGQIWRRDGAREETTVLETGVSIDIPVGTAFQYRCTGVDPLQFLCVSMPRWPGDKEATVIEGPWKPTAPARRRLASPRVDRTLTQRR

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
26 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
66 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
67 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
68 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
69 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
70 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
71 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
72 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
73 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
74 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
75 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
76 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
77 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
78 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
79 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
80 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
81 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
82 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
83 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
84 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
85 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
86 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
87 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
88 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
89 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
96 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
97 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
98 2871495908 Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 Isolate Nodule
99 2878760144 Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 Isolate Nodule
100 2878767105 Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 Isolate Nodule
101 2903540706 Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 Isolate Nodule
102 2937994558 Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 Isolate Nodule
103 2958165035 Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 Isolate Nodule
104 2961163497 Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 Isolate Nodule
105 2965018300 Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 Isolate Nodule
106 2968171901 Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 Isolate Nodule
107 2970554993 Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 Isolate Nodule
108 2987659509 Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 Isolate Nodule
109 3004188549 Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.16
Metatranscriptomes 0
Isolates 7.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.96
Nodule 7.84
Rhizoplane 1.96
Rhizosphere 88.24
Stem 0
Stem Tuber 0
Unclassified 30.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100060273 3300005445 Bacteria 3386
2 Ga0065707_10241868 3300005295 Bacteria 1120
3 Ga0065707_10438956 3300005295 Unclassified 805
4 Ga0065707_11003200 3300005295 Unclassified 538
5 Ga0070676_10289182 3300005328 Bacteria 1107
6 Ga0070670_100785875 3300005331 Unclassified 859
7 Ga0070689_100920133 3300005340 Unclassified 774
8 Ga0070703_10430075 3300005406 Unclassified 581
9 Ga0070705_100718467 3300005440 Unclassified 787
10 Ga0070708_100038109 3300005445 Bacteria 4198
11 Ga0070685_11610781 3300005466 Unclassified 502
12 Ga0070706_100016548 3300005467 Bacteria 6811
13 Ga0070706_100023652 3300005467 Bacteria 5656
14 Ga0070706_100150193 3300005467 Bacteria 2175
15 Ga0070706_100345353 3300005467 Bacteria 1387
16 Ga0070707_100048361 3300005468 Bacteria 4075
17 Ga0070698_100017346 3300005471 Bacteria 7586
18 Ga0070698_100023786 3300005471 Bacteria 6398
19 Ga0070698_100026381 3300005471 Bacteria 6047
20 Ga0070698_100088817 3300005471 Bacteria 3075
21 Ga0070698_100425959 3300005471 Bacteria 1262
22 Ga0070698_101689087 3300005471 Unclassified 586
23 Ga0070699_100010984 3300005518 Bacteria 7830
24 Ga0070699_100011461 3300005518 Bacteria 7657
25 Ga0070699_100038716 3300005518 Bacteria 4128
26 Ga0070699_100318336 3300005518 Bacteria 1398
27 Ga0070697_100025403 3300005536 Unclassified 4726
28 Ga0070697_100064567 3300005536 Unclassified 2990
29 Ga0070697_100064988 3300005536 Bacteria 2980
30 Ga0070697_100344362 3300005536 Bacteria 1287
31 Ga0070695_100747476 3300005545 Archaea 780
32 Ga0070696_101044047 3300005546 Unclassified 684
33 Ga0070665_100992469 3300005548 Unclassified 852
34 Ga0070704_100062190 3300005549 Bacteria 2675
35 Ga0070704_100174185 3300005549 Bacteria 1714
36 Ga0068852_101408662 3300005616 Unclassified 719
37 Ga0068859_102316893 3300005617 Unclassified 592
38 Ga0068861_100136367 3300005719 Bacteria 1998
39 Ga0068863_102634545 3300005841 Unclassified 512
40 Ga0068858_101590775 3300005842 Unclassified 645
41 Ga0068862_100880985 3300005844 Bacteria 879
42 Ga0081539_10011901 3300005985 Bacteria 6796
43 Ga0075367_10528620 3300006178 Bacteria 749
44 Ga0075370_10042251 3300006353 Bacteria 2576
45 Ga0075428_100001215 3300006844 Bacteria 27555
46 Ga0075428_100238630 3300006844 Bacteria 1962
47 Ga0075428_100522369 3300006844 Unclassified 1270
48 Ga0075430_100966516 3300006846 Unclassified 702
49 Ga0075431_100175561 3300006847 Bacteria 2201
50 Ga0075429_100234194 3300006880 Bacteria 1609
51 Ga0075429_100597880 3300006880 Bacteria 967
52 Ga0075429_100643408 3300006880 Unclassified 929
53 Ga0075436_100820414 3300006914 Bacteria 693
54 Ga0097620_102316386 3300006931 Unclassified 592
55 Ga0105244_10382593 3300009036 Bacteria 648
56 Ga0105244_10552852 3300009036 Unclassified 530
57 Ga0105245_10166434 3300009098 Bacteria 2096
58 Ga0105245_10525848 3300009098 Bacteria 1202
59 Ga0114129_10015111 3300009147 Bacteria 10986
60 Ga0114129_10100617 3300009147 Bacteria 4000
61 Ga0114129_10479998 3300009147 Bacteria 1627
62 Ga0114129_10751772 3300009147 Bacteria 1248
63 Ga0114129_11476076 3300009147 Bacteria 836
64 Ga0105243_10269600 3300009148 Bacteria 1528
65 Ga0105243_10570398 3300009148 Bacteria 1085
66 Ga0105242_10125572 3300009176 Bacteria 2208
67 Ga0105242_11080980 3300009176 Bacteria 815
68 Ga0105242_11585169 3300009176 Bacteria 688
69 Ga0105242_12312830 3300009176 Unclassified 584
70 Ga0105248_10206857 3300009177 Unclassified 2211
71 Ga0105238_10271838 3300009551 Bacteria 1675
72 Ga0105249_10112788 3300009553 Bacteria 2572
73 Ga0105249_12374729 3300009553 Unclassified 603
74 Ga0157375_10737513 3300013308 Unclassified 1137
75 Ga0163163_10588708 3300014325 Bacteria 1176
76 Ga0157380_10577044 3300014326 Bacteria 1108
77 Ga0157377_10079625 3300014745 Bacteria 1912
78 Ga0207684_10015102 3300025910 Bacteria 6648
79 Ga0207684_10032472 3300025910 Bacteria 4439
80 Ga0207684_10073584 3300025910 Bacteria 2902
81 Ga0207684_10200503 3300025910 Unclassified 1721
82 Ga0207662_10321388 3300025918 Bacteria 1033
83 Ga0207646_10109355 3300025922 Bacteria 2480
84 Ga0207646_10140322 3300025922 Bacteria 2176
85 Ga0207646_10174830 3300025922 Bacteria 1939
86 Ga0207646_10206913 3300025922 Bacteria 1772
87 Ga0207650_11313009 3300025925 Unclassified 616
88 Ga0207650_11344244 3300025925 Unclassified 608
89 Ga0207659_11855694 3300025926 Unclassified 511
90 Ga0207687_10295485 3300025927 Bacteria 1303
91 Ga0207686_10222144 3300025934 Bacteria 1365
92 Ga0207670_10563868 3300025936 Bacteria 932
93 Ga0207670_11516404 3300025936 Bacteria 570
94 Ga0207665_10590710 3300025939 Bacteria 866
95 Ga0207711_10274711 3300025941 Unclassified 1551
96 Ga0207712_10233612 3300025961 Bacteria 1477
97 Ga0207708_10517171 3300026075 Bacteria 1002
98 Ga0207674_11783180 3300026116 Bacteria 583
99 Ga0207675_100561018 3300026118 Bacteria 1142
100 Ga0207683_11076093 3300026121 Unclassified 746
101 Ga0209982_1042130 3300027552 Unclassified 729
102 Ga0209970_1072691 3300027614 Unclassified 640
103 Ga0209966_1020463 3300027695 Bacteria 1282
104 Ga0209974_10031328 3300027876 Unclassified 1761
105 Ga0268264_10198440 3300028381 Bacteria 1834
106 Ga0316578_10653263 3300031728 Unclassified 614
107 Ga0307405_10775771 3300031731 Bacteria 801
108 Ga0307415_101555582 3300032126 Unclassified 634
109 Ga0316580_10079549 3300032139 Bacteria 1003
110 Ga0316582_0394790 3300036647 Unclassified 953
111 Ga0395905_1718940 3300037471 Unclassified 533
112 Ga0439438_029307 3300041405 Bacteria 1474
113 Ga0439461_0043944 3300041410 Bacteria 973
114 Ga0439465_0037621 3300041413 Bacteria 1557
115 Ga0439441_019088 3300042001 Bacteria 1244
116 Ga0439441_022122 3300042001 Bacteria 1179
117 Ga0439454_086159 3300042011 Unclassified 575
118 Ga0439456_031994 3300042013 Bacteria 1129
119 Ga0450923_074191 3300042125 Bacteria 758
120 Ga0450907_002752 3300042146 Bacteria 3263
121 Ga0439434_0282892 3300042435 Unclassified 571
122 Ga0439435_0331338 3300042436 Unclassified 526
123 Ga0451577_0071734 3300042876 Bacteria 3089
124 Ga0453683_0229530 3300044673 Bacteria 1181
125 Ga0453684_2540741 3300044712 Unclassified 505
126 Ga0496102_0305928 3300048905 Bacteria 1498
127 Ga0496107_0199049 3300048910 Unclassified 1489
128 Ga0496114_0292774 3300048917 Bacteria 1436
129 Ga0501068_0380919 3300049584 Unclassified 908
130 Ga0501074_0345766 3300049590 Unclassified 1056
131 nmdc:mga0yw44_378020_c1 3300050492 Bacteria 956
132 nmdc:mga05p37_3291_c1 3300050507 Bacteria 18843
133 nmdc:mga05p37_575561_c1 3300050507 Bacteria 1276
134 nmdc:mga09592_216328_c1 3300050508 Bacteria 1660
135 nmdc:mga09592_926690_c1 3300050508 Bacteria 731
136 nmdc:mga0qj67_197741_c1 3300050509 Unclassified 1633
137 nmdc:mga06r32_157774_c1 3300050510 Bacteria 2251
138 nmdc:mga08y16_1816971_c1 3300050511 Bacteria 562
139 nmdc:mga0rr50_1221518_c1 3300050513 Bacteria 638
140 nmdc:mga08x19_743997_c1 3300050514 Bacteria 696
141 Ga0501082_0956566 3300060353 Unclassified 749
142 2871502394 2871495908 Bacteria 6935695
143 2878766285 2878760144 Bacteria 6823465
144 2878773486 2878767105 Bacteria 6898628
145 2903547331 2903540706 Bacteria 7062119
146 2938001194 2937994558 Bacteria 7036190
147 2958171460 2958165035 Bacteria 6906348
148 2961169901 2961163497 Bacteria 6901077
149 2965024661 2965018300 Bacteria 6883036
150 2968178293 2968171901 Bacteria 6894245
151 2970561139 2970554993 Bacteria 6814252
152 2987666125 2987659509 Bacteria 6966464
153 3004195148 3004188549 Bacteria 6952365
154 Ga0070708_100060273
155 Ga0065707_10241868
156 Ga0065707_10438956
157 Ga0065707_11003200
158 Ga0070676_10289182
159 Ga0070670_100785875
160 Ga0070689_100920133
161 Ga0070703_10430075
162 Ga0070705_100718467
163 Ga0070708_100038109
164 Ga0070685_11610781
165 Ga0070706_100016548
166 Ga0070706_100023652
167 Ga0070706_100150193
168 Ga0070706_100345353
169 Ga0070707_100048361
170 Ga0070698_100017346
171 Ga0070698_100023786
172 Ga0070698_100026381
173 Ga0070698_100088817
174 Ga0070698_100425959
175 Ga0070698_101689087
176 Ga0070699_100010984
177 Ga0070699_100011461
178 Ga0070699_100038716
179 Ga0070699_100318336
180 Ga0070697_100025403
181 Ga0070697_100064567
182 Ga0070697_100064988
183 Ga0070697_100344362
184 Ga0070695_100747476
185 Ga0070696_101044047
186 Ga0070665_100992469
187 Ga0070704_100062190
188 Ga0070704_100174185
189 Ga0068852_101408662
190 Ga0068859_102316893
191 Ga0068861_100136367
192 Ga0068863_102634545
193 Ga0068858_101590775
194 Ga0068862_100880985
195 Ga0081539_10011901
196 Ga0075367_10528620
197 Ga0075370_10042251
198 Ga0075428_100001215
199 Ga0075428_100238630
200 Ga0075428_100522369
201 Ga0075430_100966516
202 Ga0075431_100175561
203 Ga0075429_100234194
204 Ga0075429_100597880
205 Ga0075429_100643408
206 Ga0075436_100820414
207 Ga0097620_102316386
208 Ga0105244_10382593
209 Ga0105244_10552852
210 Ga0105245_10166434
211 Ga0105245_10525848
212 Ga0114129_10015111
213 Ga0114129_10100617
214 Ga0114129_10479998
215 Ga0114129_10751772
216 Ga0114129_11476076
217 Ga0105243_10269600
218 Ga0105243_10570398
219 Ga0105242_10125572
220 Ga0105242_11080980
221 Ga0105242_11585169
222 Ga0105242_12312830
223 Ga0105248_10206857
224 Ga0105238_10271838
225 Ga0105249_10112788
226 Ga0105249_12374729
227 Ga0157375_10737513
228 Ga0163163_10588708
229 Ga0157380_10577044
230 Ga0157377_10079625
231 Ga0207684_10015102
232 Ga0207684_10032472
233 Ga0207684_10073584
234 Ga0207684_10200503
235 Ga0207662_10321388
236 Ga0207646_10109355
237 Ga0207646_10140322
238 Ga0207646_10174830
239 Ga0207646_10206913
240 Ga0207650_11313009
241 Ga0207650_11344244
242 Ga0207659_11855694
243 Ga0207687_10295485
244 Ga0207686_10222144
245 Ga0207670_10563868
246 Ga0207670_11516404
247 Ga0207665_10590710
248 Ga0207711_10274711
249 Ga0207712_10233612
250 Ga0207708_10517171
251 Ga0207674_11783180
252 Ga0207675_100561018
253 Ga0207683_11076093
254 Ga0209982_1042130
255 Ga0209970_1072691
256 Ga0209966_1020463
257 Ga0209974_10031328
258 Ga0268264_10198440
259 Ga0316578_10653263
260 Ga0307405_10775771
261 Ga0307415_101555582
262 Ga0316580_10079549
263 Ga0316582_0394790
264 Ga0395905_1718940
265 Ga0439438_029307
266 Ga0439461_0043944
267 Ga0439465_0037621
268 Ga0439441_019088
269 Ga0439441_022122
270 Ga0439454_086159
271 Ga0439456_031994
272 Ga0450923_074191
273 Ga0450907_002752
274 Ga0439434_0282892
275 Ga0439435_0331338
276 Ga0451577_0071734
277 Ga0453683_0229530
278 Ga0453684_2540741
279 Ga0496102_0305928
280 Ga0496107_0199049
281 Ga0496114_0292774
282 Ga0501068_0380919
283 Ga0501074_0345766
284 nmdc:mga0yw44_378020_c1
285 nmdc:mga05p37_3291_c1
286 nmdc:mga05p37_575561_c1
287 nmdc:mga09592_216328_c1
288 nmdc:mga09592_926690_c1
289 nmdc:mga0qj67_197741_c1
290 nmdc:mga06r32_157774_c1
291 nmdc:mga08y16_1816971_c1
292 nmdc:mga0rr50_1221518_c1
293 nmdc:mga08x19_743997_c1
294 Ga0501082_0956566
295 2871502394
296 2878766285
297 2878773486
298 2903547331
299 2938001194
300 2958171460
301 2961169901
302 2965024661
303 2968178293
304 2970561139
305 2987666125
306 3004195148

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07883

Cupin_2

Cupin domain

32

106

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5e1r-assembly1.cif.gz_A crystal structure of pecan (carya illinoinensis) vicilin, a new food allergen 0.9152 29 107
5e1r-assembly2.cif.gz_D crystal structure of pecan (carya illinoinensis) vicilin, a new food allergen 0.9142 29 107
7zvy-assembly4.cif.gz_H thermococcus kadokarensis phosphomannose isomerase 0.8739 18 107
6m9r-assembly1.cif.gz_A crystal structure of sznf from streptomyces achromogenes var. streptozoticus nrrl 2697 with a bound n(delta)-hydroxy-n(omega)-methyl-l-arginine intermediate 0.8706 29 107
6m9s-assembly2.cif.gz_D crystal structure of semet sznf from streptomyces achromogenes var. streptozoticus nrrl 2697 0.8679 29 107
ID Description Score Start End Superfamily
af_F1LVA4_327_469_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9322 29 108 2.60.120.10
af_Q9USR9_537_626_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9166 18 108 2.60.120.10
2d40B00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9118 30 107 2.60.120.10
af_Q03188_852_942_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9041 18 108 2.60.120.10
af_E7FAC3_1039_1126_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.902 17 108 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A6P5KVU8-F1-model_v4 Uncharacterized protein LOC110213790 isoform X2 0.9384 29 108 GO:0005794
GO:0005886
AF-A0A7L3QNV1-F1-model_v4 GL25 protein 0.9299 29 108 GO:0005794
GO:0005886
AF-A0A6A6Y0P7-F1-model_v4 Cupin type-2 domain-containing protein 0.921 26 107 GO:0046872
AF-A0A5N8Z0A3-F1-model_v4 Cupin domain-containing protein 0.9154 3 108
AF-A0A3Q2GYL5-F1-model_v4 Chromosome 8 C18orf54 homolog 0.9154 29 107 GO:0005794
GO:0005886
GO:0008284
GO:0042981

Map