F212951

General Info

Members Datasets Scaffolds Average Seq Length
151 134 302 447

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2515154202|2516082780
Length 498
Sequence LSAAPARVVVVRAVNSANANRFGRSPPPSTPRARVDPWQDELVAERLIVIGGDAAGMTAASQARRRRGPDDLEIIAFERGQFTSYSACGIPYWISGLVPQRDQLIARDPTTFRERFDIGVRLRHEVTAVDLDRREVVARDLANGGEVRERFDTLVYATGAHPLRPAWARTGVKGVFGVQTLDDGAALRDWLDTHPRPRQAVVVGGGYIGVEMAEALIQRGLEVTLVEKASQPMSTVDPDMAKLVNDAMHGVGVQIRTDLEVTGLQERDGRVCTVLTSDGPIPADLVVLGLGVRPNVALAEAAGLPIGPSGALRVDRRMRVPGVDDVWAAGDCVECLHRVSGMPVHIPLGTHANKQGRVAGVNIGGGYATFPGVIGTAVIKVCDLEVGRTGLREQDAAAAGFEFVSVITKSTNRAGYFPGSRPMTVKLIAERPTGRLLGAQIVGWSEAAKRIDALAVALWNGMTVDDMTALDLGYAPPYSPVWDPVLIAARKAVDALGR

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
21 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
22 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
23 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
37 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
38 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
39 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
40 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
41 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
42 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
43 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
44 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
45 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
46 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
47 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
48 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
49 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
50 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
51 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
52 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
53 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
54 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
55 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
56 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
57 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
58 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
59 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
60 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
61 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
62 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
63 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
64 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
65 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
66 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
67 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
68 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
69 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
70 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
71 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
72 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
73 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
74 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
75 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
76 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
77 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
78 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
79 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
80 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
81 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
82 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
84 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
85 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
86 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
87 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
88 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
89 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
90 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
91 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
92 2501939600 Micromonospora sp. L5 Isolate Unclassified
93 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
94 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
95 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
96 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
97 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
98 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
99 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
100 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
101 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
102 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
103 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
104 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
105 2855683550 Micromonospora sp. RP3T Isolate Unclassified
106 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
107 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
108 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
109 2858868258 Micromonospora sp. MH33 Isolate Unclassified
110 2858882152 Micromonospora noduli MED15 Isolate Nodule
111 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
112 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
113 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
114 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
115 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
116 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
117 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
118 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
119 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
120 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
121 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
122 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
123 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
124 2902582711 Micromonospora sp. AP08 Isolate Unclassified
125 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
126 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
127 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
128 649633069 Micromonospora sp. L5 Isolate Unclassified
129 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
130 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
131 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
132 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
133 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
134 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 70.86
Metatranscriptomes 0
Isolates 29.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.99
Nodule 3.97
Rhizoplane 0.66
Rhizosphere 63.58
Stem 0
Stem Tuber 0
Unclassified 0.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10042373 3300003320 Bacteria 2691
2 Ga0070670_100092335 3300005331 Bacteria 2603
3 Ga0068869_100127547 3300005334 Bacteria 1952
4 Ga0068868_100019939 3300005338 Bacteria 5029
5 Ga0070661_100092463 3300005344 Bacteria 2241
6 Ga0070675_100004938 3300005354 Bacteria 10171
7 Ga0070659_100025124 3300005366 Bacteria 4573
8 Ga0070667_100051732 3300005367 Bacteria 3463
9 Ga0070700_100007813 3300005441 Bacteria 5799
10 Ga0070663_100003247 3300005455 Bacteria 9352
11 Ga0070706_100054094 3300005467 Bacteria 3705
12 Ga0070698_100004906 3300005471 Bacteria 14675
13 Ga0070693_100072976 3300005547 Bacteria 2026
14 Ga0070664_100048530 3300005564 Bacteria 3587
15 Ga0068861_100192257 3300005719 Bacteria 1707
16 Ga0081539_10000657 3300005985 Bacteria 69568
17 Ga0081539_10001151 3300005985 Bacteria 47918
18 Ga0081539_10007818 3300005985 Bacteria 9561
19 Ga0081539_10014916 3300005985 Bacteria 5702
20 Ga0081539_10027795 3300005985 Bacteria 3574
21 Ga0081539_10083411 3300005985 Bacteria 1673
22 Ga0070717_10063024 3300006028 Bacteria 3076
23 Ga0111539_10004967 3300009094 Bacteria 17308
24 Ga0114129_10279216 3300009147 Bacteria 2232
25 Ga0105243_10171562 3300009148 Bacteria 1879
26 Ga0157377_10001194 3300014745 Bacteria 11050
27 Ga0213875_10000071 3300021388 Bacteria 120220
28 Ga0207684_10016164 3300025910 Bacteria 6413
29 Ga0207649_10184253 3300025920 Bacteria 1463
30 Ga0207659_10003744 3300025926 Bacteria 9172
31 Ga0207687_10036010 3300025927 Bacteria 3369
32 Ga0207690_10010143 3300025932 Bacteria 5596
33 Ga0207689_10023099 3300025942 Bacteria 5223
34 Ga0207679_10001860 3300025945 Bacteria 13116
35 Ga0207678_10015314 3300026067 Bacteria 6745
36 Ga0207708_10008046 3300026075 Bacteria 7818
37 Ga0207676_10108683 3300026095 Bacteria 2316
38 Ga0207675_100224482 3300026118 Bacteria 1811
39 Ga0268265_10056044 3300028380 Bacteria 2997
40 Ga0268264_10049505 3300028381 Bacteria 3496
41 Ga0307515_10000065 3300028794 Bacteria 244497
42 Ga0307515_10003919 3300028794 Bacteria 31059
43 Ga0307515_10019645 3300028794 Bacteria 12135
44 Ga0307512_10007379 3300030522 Bacteria 10911
45 Ga0307513_10015323 3300031456 Bacteria 9298
46 Ga0307509_10022145 3300031507 Bacteria 7172
47 Ga0307509_10055657 3300031507 Bacteria 4202
48 Ga0307408_100014195 3300031548 Bacteria 5293
49 Ga0307508_10001123 3300031616 Bacteria 30935
50 Ga0307508_10013471 3300031616 Bacteria 7478
51 Ga0307516_10002975 3300031730 Bacteria 22144
52 Ga0307516_10062215 3300031730 Bacteria 3618
53 Ga0307405_10007794 3300031731 Bacteria 5389
54 Ga0307410_10060419 3300031852 Bacteria 2590
55 Ga0326468_10000966 3300031889 Bacteria 2779
56 Ga0307406_10038830 3300031901 Bacteria 2949
57 Ga0307409_100015206 3300031995 Bacteria 5040
58 Ga0307409_100058101 3300031995 Bacteria 3002
59 Ga0307416_100021718 3300032002 Bacteria 4615
60 Ga0307415_100013033 3300032126 Bacteria 4836
61 Ga0373951_0000073 3300035091 Bacteria 39905
62 Ga0395900_0149993 3300037418 Bacteria 2382
63 Ga0395898_0096352 3300037466 Bacteria 2842
64 Ga0436364_0619304 3300037853 Bacteria 133320
65 Ga0395901_0075563 3300038443 Bacteria 3514
66 Ga0436365_0414254 3300039437 Bacteria 2187
67 Ga0436363_0048619 3300039450 Bacteria 2210
68 Ga0451791_0970913 3300041451 Bacteria 1537
69 Ga0451853_2471531 3300041512 Bacteria 5962
70 Ga0466966_0005724 3300044684 Bacteria 8182
71 Ga0466963_0000946 3300044694 Bacteria 14867
72 Ga0466963_0065393 3300044694 Bacteria 2438
73 Ga0466964_0013464 3300044706 Bacteria 3104
74 Ga0466957_0000298 3300044842 Bacteria 24230
75 Ga0466957_0017986 3300044842 Bacteria 4145
76 Ga0466960_0059854 3300044901 Bacteria 1865
77 Ga0466960_0066669 3300044901 Bacteria 1781
78 Ga0466958_0000011 3300045836 Bacteria 57675
79 Ga0466967_0006674 3300045976 Bacteria 8204
80 Ga0466967_0051181 3300045976 Bacteria 3619
81 Ga0466967_0224270 3300045976 Bacteria 1787
82 Ga0495653_0010856 3300046463 Bacteria 7455
83 Ga0495580_0019894 3300046472 Bacteria 4979
84 Ga0495662_0002317 3300046476 Bacteria 9602
85 Ga0495608_0004618 3300046511 Bacteria 9838
86 Ga0495628_0102209 3300046516 Bacteria 2211
87 Ga0495666_0003574 3300046526 Bacteria 7858
88 Ga0495586_0010427 3300046535 Bacteria 4940
89 Ga0495645_0014465 3300046543 Bacteria 5598
90 Ga0495634_0021414 3300046642 Bacteria 4570
91 Ga0495657_0008597 3300046675 Bacteria 7792
92 Ga0495623_0088357 3300046679 Bacteria 1908
93 Ga0495646_0003848 3300046680 Bacteria 9380
94 Ga0495613_0001575 3300046689 Bacteria 17292
95 Ga0495600_0051679 3300046809 Bacteria 2682
96 Ga0495604_0002744 3300047317 Bacteria 14125
97 Ga0495684_0042453 3300047471 Bacteria 3483
98 Ga0501047_0000264 3300049581 Bacteria 61679
99 Ga0501075_0136226 3300049591 Unclassified 1871
100 Ga0501081_0140470 3300049743 Bacteria 1731
101 nmdc:mga09592_181983_c1 3300050508 Bacteria 1818
102 nmdc:mga08y16_4953_c1 3300050511 Bacteria 13916
103 Ga0500641_0010333 3300053096 Bacteria 3370
104 Ga0500652_039496 3300053131 Bacteria 1892
105 Ga0500630_052840 3300053159 Bacteria 1959
106 Ga0466962_0010392 3300061719 Bacteria 4473
107 Ga0466962_0055084 3300061719 Bacteria 1900
108 2516082780 2515154202 Bacteria 5471270
109 2501940292 2501939600 Bacteria 6907073
110 2515496273 2515154088 Bacteria 5526283
111 2515718552 2515154129 Bacteria 5584369
112 2515756566 2515154137 Bacteria 5711575
113 2516089207 2515154203 Bacteria 5458536
114 2623591512 2622736626 Bacteria 7181580
115 2676481155 2675903059 Bacteria 8644972
116 2753265012 2751185782 Bacteria 11227053
117 2772647568 2772190715 Bacteria 6959372
118 2831938395 2831935698 Bacteria 5963223
119 2832007185 2832004796 Bacteria 6538017
120 2855670629 2855670206 Bacteria 7120389
121 2855679269 2855676851 Bacteria 7063653
122 2855688770 2855683550 Bacteria 7134265
123 2856858554 2856858025 Bacteria 7255264
124 2857291221 2857288857 Bacteria 7189066
125 2858854198 2858848962 Bacteria 6963058
126 2858870235 2858868258 Bacteria 7683772
127 2858887176 2858882152 Bacteria 7230291
128 2858893459 2858888857 Bacteria 7060307
129 2858897856 2858895516 Bacteria 7378898
130 2858903243 2858902515 Bacteria 7086037
131 2866065252 2866065130 Bacteria 6518152
132 2867305521 2867302475 Bacteria 7087181
133 2867316774 2867312974 Bacteria 7058875
134 2867321966 2867319477 Bacteria 7069771
135 2867511224 2867507094 Bacteria 6506033
136 2869052936 2869048445 Bacteria 6875584
137 2869063195 2869061728 Bacteria 7112407
138 2869069543 2869068681 Bacteria 7205615
139 2880495590 2880489317 Bacteria 7096270
140 2880496763 2880495981 Bacteria 7340502
141 2902583908 2902582711 Bacteria 6187705
142 2929225393 2929219909 Bacteria 6984360
143 2929231630 2929226422 Bacteria 7248583
144 2996224023 2996221748 Bacteria 6799777
145 649813263 649633069 Bacteria 6962533
146 8003832897 8003830390 Bacteria 6541657
147 8003860319 8003856774 Bacteria 7675274
148 8054708314 8054704163 Bacteria 7247792
149 8054730201 8054727385 Bacteria 7558670
150 8054740113 8054734606 Bacteria 6947278
151 8055419017 8055412473 Bacteria 6257500
152 rootH2_10042373
153 Ga0070670_100092335
154 Ga0068869_100127547
155 Ga0068868_100019939
156 Ga0070661_100092463
157 Ga0070675_100004938
158 Ga0070659_100025124
159 Ga0070667_100051732
160 Ga0070700_100007813
161 Ga0070663_100003247
162 Ga0070706_100054094
163 Ga0070698_100004906
164 Ga0070693_100072976
165 Ga0070664_100048530
166 Ga0068861_100192257
167 Ga0081539_10000657
168 Ga0081539_10001151
169 Ga0081539_10007818
170 Ga0081539_10014916
171 Ga0081539_10027795
172 Ga0081539_10083411
173 Ga0070717_10063024
174 Ga0111539_10004967
175 Ga0114129_10279216
176 Ga0105243_10171562
177 Ga0157377_10001194
178 Ga0213875_10000071
179 Ga0207684_10016164
180 Ga0207649_10184253
181 Ga0207659_10003744
182 Ga0207687_10036010
183 Ga0207690_10010143
184 Ga0207689_10023099
185 Ga0207679_10001860
186 Ga0207678_10015314
187 Ga0207708_10008046
188 Ga0207676_10108683
189 Ga0207675_100224482
190 Ga0268265_10056044
191 Ga0268264_10049505
192 Ga0307515_10000065
193 Ga0307515_10003919
194 Ga0307515_10019645
195 Ga0307512_10007379
196 Ga0307513_10015323
197 Ga0307509_10022145
198 Ga0307509_10055657
199 Ga0307408_100014195
200 Ga0307508_10001123
201 Ga0307508_10013471
202 Ga0307516_10002975
203 Ga0307516_10062215
204 Ga0307405_10007794
205 Ga0307410_10060419
206 Ga0326468_10000966
207 Ga0307406_10038830
208 Ga0307409_100015206
209 Ga0307409_100058101
210 Ga0307416_100021718
211 Ga0307415_100013033
212 Ga0373951_0000073
213 Ga0395900_0149993
214 Ga0395898_0096352
215 Ga0436364_0619304
216 Ga0395901_0075563
217 Ga0436365_0414254
218 Ga0436363_0048619
219 Ga0451791_0970913
220 Ga0451853_2471531
221 Ga0466966_0005724
222 Ga0466963_0000946
223 Ga0466963_0065393
224 Ga0466964_0013464
225 Ga0466957_0000298
226 Ga0466957_0017986
227 Ga0466960_0059854
228 Ga0466960_0066669
229 Ga0466958_0000011
230 Ga0466967_0006674
231 Ga0466967_0051181
232 Ga0466967_0224270
233 Ga0495653_0010856
234 Ga0495580_0019894
235 Ga0495662_0002317
236 Ga0495608_0004618
237 Ga0495628_0102209
238 Ga0495666_0003574
239 Ga0495586_0010427
240 Ga0495645_0014465
241 Ga0495634_0021414
242 Ga0495657_0008597
243 Ga0495623_0088357
244 Ga0495646_0003848
245 Ga0495613_0001575
246 Ga0495600_0051679
247 Ga0495604_0002744
248 Ga0495684_0042453
249 Ga0501047_0000264
250 Ga0501075_0136226
251 Ga0501081_0140470
252 nmdc:mga09592_181983_c1
253 nmdc:mga08y16_4953_c1
254 Ga0500641_0010333
255 Ga0500652_039496
256 Ga0500630_052840
257 Ga0466962_0010392
258 Ga0466962_0055084
259 2516082780
260 2501940292
261 2515496273
262 2515718552
263 2515756566
264 2516089207
265 2623591512
266 2676481155
267 2753265012
268 2772647568
269 2831938395
270 2832007185
271 2855670629
272 2855679269
273 2855688770
274 2856858554
275 2857291221
276 2858854198
277 2858870235
278 2858887176
279 2858893459
280 2858897856
281 2858903243
282 2866065252
283 2867305521
284 2867316774
285 2867321966
286 2867511224
287 2869052936
288 2869063195
289 2869069543
290 2880495590
291 2880496763
292 2902583908
293 2929225393
294 2929231630
295 2996224023
296 649813263
297 8003832897
298 8003860319
299 8054708314
300 8054730201
301 8054740113
302 8055419017

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02852

Pyr_redox_dim

Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

376

484

0.94

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

199

279

0.93

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

45

356

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2cdu-assembly1.cif.gz_B the crystal structure of water-forming nad(p)h oxidase from lactobacillus sanfranciscensis 0.9306 1 304
5fi5-assembly1.cif.gz_B heteroyohimbine synthase thas1 from catharanthus roseus - apo form 0.9166 153 185
4eqr-assembly1.cif.gz_B crystal structure of the y361f mutant of staphylococcus aureus coadr 0.9092 1 307
3lxd-assembly1.cif.gz_A crystal structure of ferredoxin reductase arr from novosphingobium aromaticivorans 0.9085 3 302
8pxk-assembly1.cif.gz_A structure of nadh-dependent ferredoxin reductase, bpha4, solved at wavelength 5.76 a 0.9055 3 302
ID Description Score Start End Superfamily
af_Q58065_4_310_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9623 5 303 3.50.50.60
3hg7A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9554 153 181 3.40.50.720
af_A0A1D6LF14_1_79_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9506 166 240 3.50.50.60
af_A0A0R0H2V7_155_331_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9488 153 181 3.40.50.720
4ocgB01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9467 1 304 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A4S0Q2K9-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.956 153 243 GO:0005737
GO:0016651
AF-A0A7J3ABN1-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9531 2 239 GO:0016491
AF-A0A419KYU8-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9493 2 303 GO:0016491
AF-A0A3R8RNM0-F1-model_v4 Flavoprotein oxidoreductase 0.9487 54 310 GO:0016491
AF-A0A847ABE9-F1-model_v4 FAD-dependent oxidoreductase 0.9479 2 347 GO:0016491

Map