F212707

General Info

Members Datasets Scaffolds Average Seq Length
151 128 302 351

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0024799|Ga0501033_0024799_1489_2646
Length 385
Sequence MSEQQQQSLEKASTLEPTPSLAKVPEQRPEPGERLLEVTGLRKYFPINGGFIFQRRVGDVRAVDGVDFHIDKGEALGMVGESGCGKSTTGRLVTRLLEPTDGKVVYAGQDITHADRKQLAPIRSEIQMIFQDPYASLNPRQTVGTIISGPMEVNHLNPPGGREKRVRELLEIVGLNPEHYNRFPHEFSGGQRQRIGVARALALNPKLIVADEPVSALDVSIQAQVVNLLQQVQQELGIAFLFIAHDLAIVRHFSQRVAVMYLGKIVEVGDRDSIYNKPRHPYTHALLSAAPEADPDDDGRERIRLAGDVPSPINPPSGCRFRTRCWKAQDVCASEEPPLIQLGGSKDGHLTACHFPEEPTVAARDEDIVLDPALAAIEEAADKTL

Samples

Sample ID Description Type Environment
1 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
28 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
29 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
33 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
45 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
46 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
47 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
48 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
49 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
50 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
51 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
52 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
53 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
54 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
55 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
56 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
57 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
58 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
59 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
60 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
61 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
62 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
63 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
64 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
65 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
68 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
69 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
70 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
71 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
72 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
73 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
74 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
75 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
76 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
77 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
78 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
79 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
80 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
81 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
82 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
83 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
84 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
85 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
88 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
89 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
90 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
91 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
92 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
93 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
94 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
95 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
96 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
97 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
98 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
99 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
100 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
101 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
102 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
103 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
108 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
109 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
110 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
111 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
112 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
113 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
114 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
115 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
116 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
117 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
118 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
119 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
120 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
121 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
122 2862574272 Streptomyces sp. AcE210 Isolate Nodule
123 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
124 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
125 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
126 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
127 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
128 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.73
Metatranscriptomes 0
Isolates 9.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.97
Nodule 0.66
Rhizoplane 3.97
Rhizosphere 75.5
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501033_0024799 3300049570 Bacteria 4523
2 Ga0070658_10001293 3300005327 Bacteria 21357
3 Ga0070680_100097592 3300005336 Bacteria 2437
4 Ga0070714_100012435 3300005435 Bacteria 6797
5 Ga0070713_100077060 3300005436 Bacteria 2834
6 Ga0070710_10000558 3300005437 Bacteria 17606
7 Ga0070663_100072522 3300005455 Bacteria 2509
8 Ga0070663_100150929 3300005455 Bacteria 1782
9 Ga0070663_100180829 3300005455 Bacteria 1636
10 Ga0070685_10062499 3300005466 Bacteria 2184
11 Ga0070707_100221073 3300005468 Bacteria 1845
12 Ga0070679_100100878 3300005530 Bacteria 2873
13 Ga0068855_100001152 3300005563 Bacteria 32744
14 Ga0070664_100311368 3300005564 Bacteria 1425
15 Ga0068864_100068716 3300005618 Bacteria 3079
16 Ga0068863_100054940 3300005841 Bacteria 3772
17 Ga0068858_100055222 3300005842 Bacteria 3671
18 Ga0068860_100028470 3300005843 Bacteria 5377
19 Ga0081455_10004573 3300005937 Bacteria 15454
20 Ga0081539_10000818 3300005985 Bacteria 60165
21 Ga0081539_10004529 3300005985 Bacteria 15259
22 Ga0081539_10009225 3300005985 Bacteria 8306
23 Ga0081539_10010670 3300005985 Bacteria 7412
24 Ga0075431_100023395 3300006847 Bacteria 6321
25 Ga0075431_100023652 3300006847 Bacteria 6289
26 Ga0075433_10000739 3300006852 Bacteria 22414
27 Ga0075429_100009178 3300006880 Bacteria 8588
28 Ga0068865_100045844 3300006881 Bacteria 2998
29 Ga0105245_10013707 3300009098 Bacteria 7063
30 Ga0105241_10000242 3300009174 Bacteria 41424
31 Ga0105249_10104386 3300009553 Bacteria 2671
32 Ga0105239_10154240 3300010375 Bacteria 2564
33 Ga0157369_10078268 3300013105 Bacteria 3543
34 Ga0157374_10053748 3300013296 Bacteria 3755
35 Ga0157378_10030682 3300013297 Bacteria 4748
36 Ga0157375_10424791 3300013308 Bacteria 1495
37 Ga0163163_10678433 3300014325 Bacteria 1094
38 Ga0213875_10001221 3300021388 Bacteria 17405
39 Ga0207692_10000482 3300025898 Bacteria 14053
40 Ga0207705_10002090 3300025909 Bacteria 15525
41 Ga0207695_10000672 3300025913 Bacteria 67351
42 Ga0207671_10000147 3300025914 Bacteria 109047
43 Ga0207652_10049942 3300025921 Bacteria 3583
44 Ga0207687_10008244 3300025927 Bacteria 6817
45 Ga0207664_10009577 3300025929 Bacteria 6804
46 Ga0207670_10079491 3300025936 Bacteria 2289
47 Ga0207679_10229049 3300025945 Bacteria 1568
48 Ga0207674_10036444 3300026116 Bacteria 5125
49 Ga0268264_10143886 3300028381 Bacteria 2129
50 Ga0307515_10010352 3300028794 Bacteria 17872
51 Ga0307511_10034392 3300030521 Bacteria 4448
52 Ga0307512_10007134 3300030522 Bacteria 11126
53 Ga0307512_10063209 3300030522 Bacteria 2832
54 Ga0307513_10037248 3300031456 Bacteria 5416
55 Ga0307513_10083070 3300031456 Bacteria 3295
56 Ga0307509_10044842 3300031507 Bacteria 4774
57 Ga0307509_10113239 3300031507 Bacteria 2711
58 Ga0307508_10005064 3300031616 Bacteria 12657
59 Ga0307508_10006341 3300031616 Bacteria 11134
60 Ga0307508_10054780 3300031616 Bacteria 3534
61 Ga0307508_10073162 3300031616 Bacteria 3003
62 Ga0316576_10006090 3300031727 Bacteria 7464
63 Ga0316576_10099858 3300031727 Bacteria 2168
64 Ga0307516_10032211 3300031730 Bacteria 5280
65 Ga0326468_10000859 3300031889 Bacteria 3016
66 Ga0307415_100200198 3300032126 Bacteria 1584
67 Ga0307507_10072163 3300033179 Bacteria 3113
68 Ga0373940_0014572 3300035088 Bacteria 1920
69 Ga0373943_0141175 3300035170 Bacteria 1298
70 Ga0373942_0000160 3300035207 Bacteria 16318
71 Ga0373962_0001129 3300035242 Bacteria 6229
72 Ga0316574_0038403 3300035398 Bacteria 2939
73 Ga0316584_0013904 3300036712 Bacteria 5711
74 Ga0395899_0004109 3300037312 Bacteria 11460
75 Ga0395899_0005933 3300037312 Bacteria 9485
76 Ga0395899_0151235 3300037312 Bacteria 1645
77 Ga0395900_0015934 3300037418 Bacteria 7659
78 Ga0395900_0250546 3300037418 Bacteria 1772
79 Ga0395898_0028425 3300037466 Bacteria 5602
80 Ga0395905_0390839 3300037471 Bacteria 1285
81 Ga0436364_0729873 3300037853 Bacteria 3005
82 Ga0436364_1379501 3300037853 Bacteria 33162
83 Ga0436364_1433089 3300037853 Bacteria 3622
84 Ga0395901_0026451 3300038443 Bacteria 5957
85 Ga0395901_0026614 3300038443 Bacteria 5939
86 Ga0451853_1369728 3300041512 Bacteria 2343
87 Ga0466969_0029194 3300044656 Bacteria 2817
88 Ga0466972_0006759 3300044658 Bacteria 5757
89 Ga0466972_0016708 3300044658 Bacteria 3669
90 Ga0466965_0038528 3300044683 Bacteria 2348
91 Ga0466966_0142501 3300044684 Bacteria 1464
92 Ga0466961_0001156 3300044693 Bacteria 16225
93 Ga0466971_0013131 3300044719 Bacteria 3632
94 Ga0466970_0020612 3300044765 Bacteria 3428
95 Ga0466960_0001893 3300044901 Bacteria 7695
96 Ga0466959_0037283 3300045049 Bacteria 3591
97 Ga0466958_0091382 3300045836 Bacteria 1884
98 Ga0466967_0004028 3300045976 Bacteria 9799
99 Ga0495592_0103427 3300046454 Bacteria 2026
100 Ga0495603_0004161 3300046455 Bacteria 8621
101 Ga0495629_0079987 3300046459 Bacteria 2282
102 Ga0495651_0000339 3300046462 Bacteria 36218
103 Ga0495664_0012729 3300046477 Bacteria 4765
104 Ga0495628_0085147 3300046516 Bacteria 2453
105 Ga0495586_0027831 3300046535 Bacteria 3025
106 Ga0495668_0079957 3300046616 Bacteria 1794
107 Ga0495611_0042947 3300046648 Bacteria 2020
108 Ga0495635_0059401 3300046663 Bacteria 2629
109 Ga0495588_0176761 3300046674 Bacteria 1128
110 Ga0495623_0003508 3300046679 Bacteria 10379
111 Ga0495623_0033151 3300046679 Bacteria 3315
112 Ga0495646_0040854 3300046680 Bacteria 2853
113 Ga0495670_0011099 3300046691 Bacteria 4428
114 Ga0495589_0004520 3300046794 Bacteria 7392
115 Ga0495600_0020980 3300046809 Bacteria 4181
116 Ga0495581_0057289 3300047315 Bacteria 2249
117 Ga0495685_002800 3300047447 Bacteria 5498
118 Ga0496100_0006973 3300048903 Bacteria 6195
119 Ga0496103_0039714 3300048906 Bacteria 2892
120 Ga0496106_0011550 3300048909 Bacteria 6528
121 Ga0496107_0003644 3300048910 Bacteria 10350
122 Ga0496108_0000071 3300048911 Bacteria 113930
123 Ga0496115_0198732 3300048918 Bacteria 1656
124 Ga0501034_0049733 3300049571 Bacteria 4230
125 Ga0501043_0007173 3300049579 Bacteria 8858
126 Ga0501047_0130846 3300049581 Bacteria 2390
127 Ga0501035_0031254 3300049822 Bacteria 4849
128 Ga0501044_0031385 3300049823 Bacteria 5592
129 nmdc:mga09592_38405_c1 3300050508 Bacteria 4020
130 nmdc:mga06r32_25_c4 3300050510 Bacteria 17235
131 Ga0500646_0000575 3300053090 Bacteria 10571
132 Ga0500583_0024708 3300053092 Bacteria 2553
133 Ga0500651_0022712 3300053093 Bacteria 3921
134 Ga0500641_0010888 3300053096 Bacteria 3297
135 Ga0500594_0008811 3300053118 Bacteria 2309
136 Ga0500652_017887 3300053131 Bacteria 2606
137 Ga0466962_0001734 3300061719 Bacteria 10252
138 2558909335 2558860112 Bacteria 9931328
139 2753073267 2751185734 Bacteria 8863695
140 2753074516 2751185734 Bacteria 8863695
141 2753266903 2751185782 Bacteria 11227053
142 2784590164 2784132148 Bacteria 8627943
143 2795779813 2795385470 Bacteria 8317180
144 2862577787 2862574272 Bacteria 10567477
145 2870728973 2870721527 Bacteria 9689237
146 2870729082 2870721527 Bacteria 9689237
147 2870783430 2870782633 Bacteria 9624083
148 2887484717 2887478801 Bacteria 8972725
149 8023628932 8023623736 Bacteria 8593882
150 8054166086 8054160619 Bacteria 7783213
151 8055067336 8055066027 Bacteria 9479577
152 Ga0501033_0024799
153 Ga0070658_10001293
154 Ga0070680_100097592
155 Ga0070714_100012435
156 Ga0070713_100077060
157 Ga0070710_10000558
158 Ga0070663_100072522
159 Ga0070663_100150929
160 Ga0070663_100180829
161 Ga0070685_10062499
162 Ga0070707_100221073
163 Ga0070679_100100878
164 Ga0068855_100001152
165 Ga0070664_100311368
166 Ga0068864_100068716
167 Ga0068863_100054940
168 Ga0068858_100055222
169 Ga0068860_100028470
170 Ga0081455_10004573
171 Ga0081539_10000818
172 Ga0081539_10004529
173 Ga0081539_10009225
174 Ga0081539_10010670
175 Ga0075431_100023395
176 Ga0075431_100023652
177 Ga0075433_10000739
178 Ga0075429_100009178
179 Ga0068865_100045844
180 Ga0105245_10013707
181 Ga0105241_10000242
182 Ga0105249_10104386
183 Ga0105239_10154240
184 Ga0157369_10078268
185 Ga0157374_10053748
186 Ga0157378_10030682
187 Ga0157375_10424791
188 Ga0163163_10678433
189 Ga0213875_10001221
190 Ga0207692_10000482
191 Ga0207705_10002090
192 Ga0207695_10000672
193 Ga0207671_10000147
194 Ga0207652_10049942
195 Ga0207687_10008244
196 Ga0207664_10009577
197 Ga0207670_10079491
198 Ga0207679_10229049
199 Ga0207674_10036444
200 Ga0268264_10143886
201 Ga0307515_10010352
202 Ga0307511_10034392
203 Ga0307512_10007134
204 Ga0307512_10063209
205 Ga0307513_10037248
206 Ga0307513_10083070
207 Ga0307509_10044842
208 Ga0307509_10113239
209 Ga0307508_10005064
210 Ga0307508_10006341
211 Ga0307508_10054780
212 Ga0307508_10073162
213 Ga0316576_10006090
214 Ga0316576_10099858
215 Ga0307516_10032211
216 Ga0326468_10000859
217 Ga0307415_100200198
218 Ga0307507_10072163
219 Ga0373940_0014572
220 Ga0373943_0141175
221 Ga0373942_0000160
222 Ga0373962_0001129
223 Ga0316574_0038403
224 Ga0316584_0013904
225 Ga0395899_0004109
226 Ga0395899_0005933
227 Ga0395899_0151235
228 Ga0395900_0015934
229 Ga0395900_0250546
230 Ga0395898_0028425
231 Ga0395905_0390839
232 Ga0436364_0729873
233 Ga0436364_1379501
234 Ga0436364_1433089
235 Ga0395901_0026451
236 Ga0395901_0026614
237 Ga0451853_1369728
238 Ga0466969_0029194
239 Ga0466972_0006759
240 Ga0466972_0016708
241 Ga0466965_0038528
242 Ga0466966_0142501
243 Ga0466961_0001156
244 Ga0466971_0013131
245 Ga0466970_0020612
246 Ga0466960_0001893
247 Ga0466959_0037283
248 Ga0466958_0091382
249 Ga0466967_0004028
250 Ga0495592_0103427
251 Ga0495603_0004161
252 Ga0495629_0079987
253 Ga0495651_0000339
254 Ga0495664_0012729
255 Ga0495628_0085147
256 Ga0495586_0027831
257 Ga0495668_0079957
258 Ga0495611_0042947
259 Ga0495635_0059401
260 Ga0495588_0176761
261 Ga0495623_0003508
262 Ga0495623_0033151
263 Ga0495646_0040854
264 Ga0495670_0011099
265 Ga0495589_0004520
266 Ga0495600_0020980
267 Ga0495581_0057289
268 Ga0495685_002800
269 Ga0496100_0006973
270 Ga0496103_0039714
271 Ga0496106_0011550
272 Ga0496107_0003644
273 Ga0496108_0000071
274 Ga0496115_0198732
275 Ga0501034_0049733
276 Ga0501043_0007173
277 Ga0501047_0130846
278 Ga0501035_0031254
279 Ga0501044_0031385
280 nmdc:mga09592_38405_c1
281 nmdc:mga06r32_25_c4
282 Ga0500646_0000575
283 Ga0500583_0024708
284 Ga0500651_0022712
285 Ga0500641_0010888
286 Ga0500594_0008811
287 Ga0500652_017887
288 Ga0466962_0001734
289 2558909335
290 2753073267
291 2753074516
292 2753266903
293 2784590164
294 2795779813
295 2862577787
296 2870728973
297 2870729082
298 2870783430
299 2887484717
300 8023628932
301 8054166086
302 8055067336

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

266

332

0.97

PF00005

ABC_tran

ABC transporter

63

215

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.9409 40 277
4yer-assembly1.cif.gz_A crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9333 40 280
4yer-assembly1.cif.gz_B crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9322 40 280
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.93 40 295
8ja7-assembly1.cif.gz_D cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.9292 40 295
ID Description Score Start End Superfamily
af_P33916_272_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9749 40 293 3.40.50.300
af_P75796_311_605_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9675 40 307 3.40.50.300
af_Q2FZR0_1_324_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9632 40 346 3.40.50.300
af_P77737_9_333_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9528 40 346 3.40.50.300
af_P33916_272_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9525 40 293 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A0M8U813-F1-model_v4 deleted 0.9783 38 244
AF-I0HJ78-F1-model_v4 Putative peptide ABC transporter ATP-binding protein 0.9749 39 349 GO:0005524
GO:0015833
GO:0016887
GO:0055085
AF-A0A1H9XJ37-F1-model_v4 Peptide/nickel transport system ATP-binding protein 0.9748 36 350 GO:0005524
GO:0015833
GO:0016887
GO:0055085
AF-A0A7H0HY10-F1-model_v4 ATP-binding cassette domain-containing protein 0.9725 40 346 GO:0005524
GO:0015833
GO:0016887
GO:0055085
AF-A0A212DUA4-F1-model_v4 deleted 0.9604 130 271

Map