F210779

General Info

Members Datasets Scaffolds Average Seq Length
151 119 302 311

Family's Representative Sequence

Representative Sequence 3300005364|Ga0070673_100206199|Ga0070673_1002061991
Length 334
Sequence MSEPRSQSDSNGAASAPAWPALPLESWRETKDTLHRWLQIVGKVRLALAPMENHWWQVPLYVNARGLTTSAMPYGDGVVEARFDFLDHVLVLETNARGARRIALEPRSVADFYRDVQSSLQSLGVRARLWPHPTEIADEVIPFTEDTLHHSYDADAAQRCWRVMLDVDRVLHAFRGRFVGKCSPVHVWWGGFDIACTRFSGRRAPLHPGGIPNCPDRVAREGYSHECISAGWWPGGGGLEDAAFYAYAYPEPTGYAETAIEPTGAFYDRTLREFILPYEVVRTSERPDELLLRFLHSTYAAGADLAQWDRAALERPPGPDPRLAETAGRKARHP

Samples

Sample ID Description Type Environment
1 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
4 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
51 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
52 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
83 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
84 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
85 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
86 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
87 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
88 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
89 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
90 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
91 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
94 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
95 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
96 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
97 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
98 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
99 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
102 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
103 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
104 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
105 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
106 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
107 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
108 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
109 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
110 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
111 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
112 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
113 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
114 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
115 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
116 2643221615 Nocardioides sp. Root224 Isolate Unclassified
117 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
118 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
119 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.69
Metatranscriptomes 0.66
Isolates 2.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.96
Nodule 0
Rhizoplane 3.31
Rhizosphere 86.75
Stem 0
Stem Tuber 0
Unclassified 8.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070673_100206199 3300005364 Bacteria 1695
2 LJNas_1000361 3300000546 Bacteria 7963
3 Ga0055536_1011369 3300003781 Bacteria 3421
4 Ga0055534_1001306 3300003784 Bacteria 10073
5 Ga0065715_10127265 3300005293 Bacteria 2091
6 Ga0070676_10163646 3300005328 Bacteria 1434
7 Ga0070683_100021888 3300005329 Bacteria 5707
8 Ga0070683_100228071 3300005329 Bacteria 1771
9 Ga0070680_100038347 3300005336 Bacteria 3875
10 Ga0070660_100405778 3300005339 Bacteria 1127
11 Ga0070689_100247290 3300005340 Bacteria 1471
12 Ga0070691_10018111 3300005341 Bacteria 3244
13 Ga0070674_100165134 3300005356 Unclassified 1683
14 Ga0070673_100221206 3300005364 Bacteria 1639
15 Ga0070709_10000031 3300005434 Bacteria 117654
16 Ga0070714_100012729 3300005435 Archaea 6721
17 Ga0070705_100000007 3300005440 Bacteria 106933
18 Ga0070708_100031463 3300005445 Bacteria 4593
19 Ga0070681_10021609 3300005458 Bacteria 6451
20 Ga0070681_10043692 3300005458 Bacteria 4487
21 Ga0070685_10000721 3300005466 Bacteria 17973
22 Ga0070706_100000301 3300005467 Bacteria 60263
23 Ga0070706_100025251 3300005467 Bacteria 5469
24 Ga0070706_100075993 3300005467 Bacteria 3109
25 Ga0070706_100088059 3300005467 Bacteria 2879
26 Ga0070707_100027455 3300005468 Bacteria 5416
27 Ga0070707_100153276 3300005468 Bacteria 2244
28 Ga0070707_100159861 3300005468 Bacteria 2195
29 Ga0070698_100003645 3300005471 Bacteria 16916
30 Ga0070699_100000008 3300005518 Bacteria 295702
31 Ga0070699_100005948 3300005518 Bacteria 10654
32 Ga0070699_100024795 3300005518 Bacteria 5171
33 Ga0070679_100006629 3300005530 Bacteria 10794
34 Ga0070684_100002182 3300005535 Bacteria 14454
35 Ga0070697_100060368 3300005536 Bacteria 3090
36 Ga0070696_100000240 3300005546 Bacteria 32969
37 Ga0070704_100081822 3300005549 Bacteria 2380
38 Ga0068855_100065955 3300005563 Bacteria 4221
39 Ga0068857_100211213 3300005577 Bacteria 1771
40 Ga0068859_100007503 3300005617 Bacteria 11065
41 Ga0068863_100003215 3300005841 Bacteria 16177
42 Ga0075366_10003185 3300006195 Bacteria 8601
43 Ga0075433_10083094 3300006852 Bacteria 2826
44 Ga0075433_10085101 3300006852 Bacteria 2791
45 Ga0075434_100005768 3300006871 Bacteria 11309
46 Ga0075434_100085182 3300006871 Bacteria 3160
47 Ga0075434_100086475 3300006871 Bacteria 3135
48 Ga0075429_100049780 3300006880 Bacteria 3644
49 Ga0075429_100146101 3300006880 Bacteria 2070
50 Ga0075436_100000697 3300006914 Bacteria 22196
51 Ga0075436_100081758 3300006914 Bacteria 2240
52 Ga0097620_100007503 3300006931 Bacteria 11065
53 Ga0097620_100368491 3300006931 Bacteria 1532
54 Ga0075435_100006638 3300007076 Bacteria 8198
55 Ga0099795_10012182 3300007788 Bacteria 2599
56 Ga0105240_10035488 3300009093 Bacteria 6425
57 Ga0111539_10077754 3300009094 Bacteria 3905
58 Ga0111539_10191767 3300009094 Bacteria 2384
59 Ga0105241_10072533 3300009174 Bacteria 2676
60 Ga0105237_10009205 3300009545 Bacteria 10600
61 Ga0105249_10141039 3300009553 Bacteria 2311
62 Ga0105249_10784118 3300009553 Bacteria 1016
63 Ga0157370_10011754 3300013104 Bacteria 9141
64 Ga0157370_10031179 3300013104 Bacteria 5218
65 Ga0157369_10246506 3300013105 Bacteria 1865
66 Ga0163162_10228918 3300013306 Unclassified 1989
67 Ga0157372_10054103 3300013307 Bacteria 4476
68 Ga0157372_10210204 3300013307 Bacteria 2255
69 Ga0163163_10032392 3300014325 Bacteria 5048
70 Ga0163163_10297105 3300014325 Bacteria 1667
71 Ga0213872_10088062 3300021361 Bacteria 1391
72 Ga0209233_1023683 3300025261 Unclassified 1551
73 Ga0209673_1032974 3300025273 Bacteria 1587
74 Ga0209130_1002982 3300025284 Bacteria 7684
75 Ga0209675_1001008 3300025291 Bacteria 17685
76 Ga0209051_1003838 3300025303 Bacteria 9620
77 Ga0209257_1023450 3300025304 Bacteria 2169
78 Ga0207653_10000091 3300025885 Bacteria 66562
79 Ga0207699_10000012 3300025906 Bacteria 278800
80 Ga0207705_10061064 3300025909 Bacteria 2723
81 Ga0207684_10000049 3300025910 Bacteria 240008
82 Ga0207684_10063943 3300025910 Bacteria 3124
83 Ga0207684_10066841 3300025910 Bacteria 3054
84 Ga0207654_10221431 3300025911 Bacteria 1255
85 Ga0207707_10013891 3300025912 Bacteria 7021
86 Ga0207695_10006607 3300025913 Bacteria 14984
87 Ga0207695_10015363 3300025913 Bacteria 9015
88 Ga0207663_10000026 3300025916 Bacteria 109142
89 Ga0207660_10105098 3300025917 Bacteria 2115
90 Ga0207657_10340653 3300025919 Bacteria 1183
91 Ga0207652_10015176 3300025921 Bacteria 6250
92 Ga0207652_10080703 3300025921 Bacteria 2844
93 Ga0207646_10041773 3300025922 Bacteria 4121
94 Ga0207646_10046497 3300025922 Bacteria 3894
95 Ga0207646_10135182 3300025922 Unclassified 2220
96 Ga0207681_10180701 3300025923 Bacteria 1607
97 Ga0207659_10225771 3300025926 Bacteria 1508
98 Ga0207690_10051767 3300025932 Bacteria 2747
99 Ga0207669_10099519 3300025937 Unclassified 1918
100 Ga0207704_10144012 3300025938 Unclassified 1671
101 Ga0207665_10008049 3300025939 Bacteria 6955
102 Ga0207661_10015624 3300025944 Bacteria 5591
103 Ga0207679_10094657 3300025945 Bacteria 2320
104 Ga0207641_10006768 3300026088 Bacteria 9605
105 Ga0207641_10501079 3300026088 Bacteria 1179
106 Ga0207674_10436121 3300026116 Unclassified 1266
107 Ga0207675_100395527 3300026118 Unclassified 1361
108 Ga0207675_100402239 3300026118 Bacteria 1349
109 Ga0207683_10183161 3300026121 Bacteria 1900
110 Ga0265338_10020417 3300028800 Bacteria 6967
111 Ga0265762_1002656 3300030760 Bacteria 3207
112 Ga0307408_100166894 3300031548 Unclassified 1754
113 Ga0307516_10000210 3300031730 Bacteria 75138
114 Ga0307407_10011381 3300031903 Unclassified 4232
115 Ga0307409_100161098 3300031995 Bacteria 1962
116 Ga0307409_100191260 3300031995 Bacteria 1822
117 Ga0307411_10008633 3300032005 Bacteria 5296
118 Ga0307415_100026656 3300032126 Bacteria 3649
119 Ga0373961_0000012 3300035241 Bacteria 121445
120 Ga0395899_0063188 3300037312 Bacteria 2724
121 Ga0395905_0001185 3300037471 Bacteria 32604
122 Ga0395905_0057610 3300037471 Bacteria 3634
123 Ga0395901_0008734 3300038443 Bacteria 10242
124 Ga0436361_1167514 3300039447 Bacteria 2059
125 Ga0466966_0028336 3300044684 Unclassified 3649
126 Ga0466957_0228889 3300044842 Bacteria 1230
127 Ga0466960_0121247 3300044901 Bacteria 1370
128 Ga0466959_0030736 3300045049 Bacteria 3976
129 Ga0466958_0028951 3300045836 Bacteria 3286
130 Ga0495656_0000336 3300046615 Bacteria 16138
131 Ga0496102_0050844 3300048905 Bacteria 3775
132 Ga0496102_0329024 3300048905 Bacteria 1439
133 Ga0496103_0267360 3300048906 Bacteria 1100
134 Ga0496112_0000001 3300048915 Bacteria 1346031
135 Ga0496114_0407433 3300048917 Bacteria 1204
136 Ga0496116_0063493 3300048919 Bacteria 2379
137 Ga0496117_0017549 3300048920 Bacteria 5972
138 Ga0496118_0007953 3300048921 Bacteria 11092
139 Ga0501076_0348960 3300049592 Bacteria 1215
140 Ga0501217_037902 3300049661 Archaea 1216
141 Ga0501257_061377 3300049686 Unclassified 950
142 Ga0501225_0032998 3300049705 Bacteria 1424
143 nmdc:mga09592_254163_c1 3300050508 Unclassified 1523
144 nmdc:mga08y16_177588_c1 3300050511 Bacteria 2211
145 nmdc:mga0n895_188101_c1 3300050512 Bacteria 2096
146 nmdc:mga08x19_42_c1 3300050514 Bacteria 150509
147 nmdc:mga0a205_22354_c1 3300050515 Bacteria 3651
148 2644089356 2643221615 Bacteria 5487866
149 2644319201 2643221657 Bacteria 5490246
150 2852679275 2852677369 Bacteria 3768884
151 2911141944 2911138879 Bacteria 5811561
152 Ga0070673_100206199
153 LJNas_1000361
154 Ga0055536_1011369
155 Ga0055534_1001306
156 Ga0065715_10127265
157 Ga0070676_10163646
158 Ga0070683_100021888
159 Ga0070683_100228071
160 Ga0070680_100038347
161 Ga0070660_100405778
162 Ga0070689_100247290
163 Ga0070691_10018111
164 Ga0070674_100165134
165 Ga0070673_100221206
166 Ga0070709_10000031
167 Ga0070714_100012729
168 Ga0070705_100000007
169 Ga0070708_100031463
170 Ga0070681_10021609
171 Ga0070681_10043692
172 Ga0070685_10000721
173 Ga0070706_100000301
174 Ga0070706_100025251
175 Ga0070706_100075993
176 Ga0070706_100088059
177 Ga0070707_100027455
178 Ga0070707_100153276
179 Ga0070707_100159861
180 Ga0070698_100003645
181 Ga0070699_100000008
182 Ga0070699_100005948
183 Ga0070699_100024795
184 Ga0070679_100006629
185 Ga0070684_100002182
186 Ga0070697_100060368
187 Ga0070696_100000240
188 Ga0070704_100081822
189 Ga0068855_100065955
190 Ga0068857_100211213
191 Ga0068859_100007503
192 Ga0068863_100003215
193 Ga0075366_10003185
194 Ga0075433_10083094
195 Ga0075433_10085101
196 Ga0075434_100005768
197 Ga0075434_100085182
198 Ga0075434_100086475
199 Ga0075429_100049780
200 Ga0075429_100146101
201 Ga0075436_100000697
202 Ga0075436_100081758
203 Ga0097620_100007503
204 Ga0097620_100368491
205 Ga0075435_100006638
206 Ga0099795_10012182
207 Ga0105240_10035488
208 Ga0111539_10077754
209 Ga0111539_10191767
210 Ga0105241_10072533
211 Ga0105237_10009205
212 Ga0105249_10141039
213 Ga0105249_10784118
214 Ga0157370_10011754
215 Ga0157370_10031179
216 Ga0157369_10246506
217 Ga0163162_10228918
218 Ga0157372_10054103
219 Ga0157372_10210204
220 Ga0163163_10032392
221 Ga0163163_10297105
222 Ga0213872_10088062
223 Ga0209233_1023683
224 Ga0209673_1032974
225 Ga0209130_1002982
226 Ga0209675_1001008
227 Ga0209051_1003838
228 Ga0209257_1023450
229 Ga0207653_10000091
230 Ga0207699_10000012
231 Ga0207705_10061064
232 Ga0207684_10000049
233 Ga0207684_10063943
234 Ga0207684_10066841
235 Ga0207654_10221431
236 Ga0207707_10013891
237 Ga0207695_10006607
238 Ga0207695_10015363
239 Ga0207663_10000026
240 Ga0207660_10105098
241 Ga0207657_10340653
242 Ga0207652_10015176
243 Ga0207652_10080703
244 Ga0207646_10041773
245 Ga0207646_10046497
246 Ga0207646_10135182
247 Ga0207681_10180701
248 Ga0207659_10225771
249 Ga0207690_10051767
250 Ga0207669_10099519
251 Ga0207704_10144012
252 Ga0207665_10008049
253 Ga0207661_10015624
254 Ga0207679_10094657
255 Ga0207641_10006768
256 Ga0207641_10501079
257 Ga0207674_10436121
258 Ga0207675_100395527
259 Ga0207675_100402239
260 Ga0207683_10183161
261 Ga0265338_10020417
262 Ga0265762_1002656
263 Ga0307408_100166894
264 Ga0307516_10000210
265 Ga0307407_10011381
266 Ga0307409_100161098
267 Ga0307409_100191260
268 Ga0307411_10008633
269 Ga0307415_100026656
270 Ga0373961_0000012
271 Ga0395899_0063188
272 Ga0395905_0001185
273 Ga0395905_0057610
274 Ga0395901_0008734
275 Ga0436361_1167514
276 Ga0466966_0028336
277 Ga0466957_0228889
278 Ga0466960_0121247
279 Ga0466959_0030736
280 Ga0466958_0028951
281 Ga0495656_0000336
282 Ga0496102_0050844
283 Ga0496102_0329024
284 Ga0496103_0267360
285 Ga0496112_0000001
286 Ga0496114_0407433
287 Ga0496116_0063493
288 Ga0496117_0017549
289 Ga0496118_0007953
290 Ga0501076_0348960
291 Ga0501217_037902
292 Ga0501257_061377
293 Ga0501225_0032998
294 nmdc:mga09592_254163_c1
295 nmdc:mga08y16_177588_c1
296 nmdc:mga0n895_188101_c1
297 nmdc:mga08x19_42_c1
298 nmdc:mga0a205_22354_c1
299 2644089356
300 2644319201
301 2852679275
302 2911141944

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19459

DUF5996

Family of unknown function (DUF5996)

19

315

1

Structural Annotation

Top 5 Hits

ID Description Score Start End
7exo-assembly1.cif.gz_A structure of legume lectin domain from methanocaldococcus jannaschii in mannose bound form 0.697 71 97
6t2n-assembly2.cif.gz_BBB prominent members of the human gut microbiota express endo-acting o-glycanases to initiate mucin breakdown 0.6748 71 98
1wdj-assembly1.cif.gz_B crystal structure of tt1808 from thermus thermophilus hb8 0.6444 75 101
1wdj-assembly1.cif.gz_C crystal structure of tt1808 from thermus thermophilus hb8 0.6353 75 101
1a78-assembly1.cif.gz_B complex of toad ovary galectin with thio-digalactose 0.615 66 99
ID Description Score Start End Superfamily
af_A0A1D8PGE2_123_352_2.120.10.80 Mainly Beta;6 Propeller;Neuraminidase;Kelch-type beta propeller 0.7944 64 99 2.120.10.80
af_F1RCQ5_476_628_2.60.120.200 Mainly Beta;Sandwich;Jelly Rolls; 0.776 71 99 2.60.120.200
af_F1Q802_261_422_2.60.120.200 Mainly Beta;Sandwich;Jelly Rolls; 0.7501 71 99 2.60.120.200
af_Q9VV99_449_608_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7446 64 100 2.130.10.10
4n6eA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7325 268 298 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A4Q5V4P6-F1-model_v4 deleted 0.9891 225 304
AF-A0A2V7CK90-F1-model_v4 Uncharacterized protein 0.9834 239 303
AF-A0A0F9EKG2-F1-model_v4 Uncharacterized protein 0.9828 231 304
AF-A0A2V9SI59-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.979 218 304
AF-A0A2V5KNI0-F1-model_v4 Uncharacterized protein 0.9776 230 303

Map