F205831

General Info

Members Datasets Scaffolds Average Seq Length
149 118 298 285

Family's Representative Sequence

Representative Sequence 3300009098|Ga0105245_10027185|Ga0105245_100271854
Length 323
Sequence VRPASTPICHIGARHRVLPSEDPTERRNVTMYEQALLAERFEEHRPRMRAVAFRLLGSPSEADDAVQETWLRVGRADTSAIADLRAWLTTIVARVALNMLRGRREVPAGVHLPEPVLDPADGMHPEHEALLADAVGYALLVVLDTLSPPERVAFVLHDMFAVPFDEIAPVLERSVEATRQLASRARRRVRTADAVPDVPIAEQRAVIEAFHAAAREGDLQRLVALLDPDVVLRADFGPQAPQEPIRGAEAVVGQAQSFSQLGLTTRPVLVNGAAGMVSFRDGAPFSLAAVLVRGGRIVAMDFLADPERLAALDLGFLDEDSDR

Samples

Sample ID Description Type Environment
1 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
10 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
11 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
12 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
19 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
22 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
23 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
24 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
30 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
31 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
32 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
33 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
34 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
35 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
36 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
37 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
38 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
39 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
40 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
41 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
42 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
43 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
44 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
45 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
46 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
47 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
48 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
49 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
50 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
51 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
52 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
53 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
54 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
55 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
56 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
57 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
58 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
59 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
60 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
61 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
62 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
63 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
64 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
65 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
66 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
67 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
68 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
69 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
70 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
71 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
72 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
73 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
74 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
75 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
76 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
77 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
78 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
79 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
80 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
81 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
82 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
83 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
84 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
87 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
88 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
89 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
90 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
91 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
92 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
93 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
94 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
95 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
96 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
97 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
98 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
99 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
100 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
101 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
102 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
103 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
104 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
105 2858882152 Micromonospora noduli MED15 Isolate Nodule
106 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
107 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
108 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
109 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
110 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
111 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
112 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
113 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
114 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
115 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
116 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
117 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
118 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 87.25
Metatranscriptomes 0
Isolates 12.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.68
Nodule 2.68
Rhizoplane 2.01
Rhizosphere 74.5
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105245_10027185 3300009098 Bacteria 5041
2 JGI25405J52794_10031074 3300003911 Bacteria 1109
3 Ga0070683_100016837 3300005329 Bacteria 6450
4 Ga0070674_100308452 3300005356 Bacteria 1264
5 Ga0070711_100025560 3300005439 Bacteria 3865
6 Ga0070708_100000306 3300005445 Bacteria 36782
7 Ga0070707_100166645 3300005468 Bacteria 2147
8 Ga0070684_100005321 3300005535 Bacteria 9856
9 Ga0081455_10029001 3300005937 Bacteria 5049
10 Ga0081455_10063503 3300005937 Bacteria 3099
11 Ga0081455_10072327 3300005937 Bacteria 2855
12 Ga0081455_10190022 3300005937 Bacteria 1547
13 Ga0081538_10001599 3300005981 Bacteria 23247
14 Ga0081538_10003657 3300005981 Bacteria 14448
15 Ga0081538_10008913 3300005981 Bacteria 8433
16 Ga0081538_10012025 3300005981 Bacteria 6970
17 Ga0081538_10021794 3300005981 Bacteria 4663
18 Ga0081538_10035672 3300005981 Bacteria 3262
19 Ga0081538_10069982 3300005981 Bacteria 1940
20 Ga0081540_1001215 3300005983 Bacteria 22492
21 Ga0081539_10003872 3300005985 Bacteria 17503
22 Ga0081539_10057912 3300005985 Bacteria 2141
23 Ga0070717_10083577 3300006028 Bacteria 2685
24 Ga0075367_10021455 3300006178 Bacteria 3610
25 Ga0075428_100501542 3300006844 Bacteria 1299
26 Ga0075430_100249540 3300006846 Bacteria 1471
27 Ga0075431_100129294 3300006847 Bacteria 2606
28 Ga0075429_100005012 3300006880 Bacteria 11399
29 Ga0075436_100002386 3300006914 Bacteria 12941
30 Ga0111539_10805595 3300009094 Bacteria 1093
31 Ga0163162_10379144 3300013306 Bacteria 1547
32 Ga0163162_10635775 3300013306 Bacteria 1192
33 Ga0213874_10000472 3300021377 Bacteria 8048
34 Ga0213876_10006953 3300021384 Bacteria 6166
35 Ga0213876_10199116 3300021384 Bacteria 1064
36 Ga0207663_10018403 3300025916 Bacteria 3915
37 Ga0207664_10001482 3300025929 Bacteria 15392
38 Ga0207661_10011218 3300025944 Bacteria 6483
39 Ga0207678_10239405 3300026067 Bacteria 1554
40 Ga0207675_100839199 3300026118 Bacteria 933
41 Ga0265329_10025758 3300031242 Bacteria 1943
42 Ga0265316_10188108 3300031344 Bacteria 1535
43 Ga0307406_10278185 3300031901 Bacteria 1275
44 Ga0307409_100067183 3300031995 Bacteria 2830
45 Ga0307411_10420658 3300032005 Bacteria 1110
46 Ga0307415_100463731 3300032126 Bacteria 1098
47 Ga0373923_0013041 3300035111 Bacteria 3088
48 Ga0373953_0019169 3300035117 Bacteria 2541
49 Ga0373956_0028951 3300035119 Bacteria 2413
50 Ga0373943_0038528 3300035170 Bacteria 2299
51 Ga0373935_0021442 3300035692 Bacteria 3955
52 Ga0373927_0031226 3300035695 Bacteria 3473
53 Ga0373927_0282209 3300035695 Bacteria 1092
54 Ga0373947_0030320 3300035725 Bacteria 3178
55 Ga0395899_0013055 3300037312 Bacteria 6354
56 Ga0395900_0002688 3300037418 Bacteria 19446
57 Ga0395900_0177523 3300037418 Bacteria 2166
58 Ga0395898_0002917 3300037466 Bacteria 19461
59 Ga0395898_0594562 3300037466 Bacteria 1049
60 Ga0395905_0001999 3300037471 Bacteria 23302
61 Ga0436364_0397395 3300037853 Bacteria 30067
62 Ga0395901_0056178 3300038443 Bacteria 4095
63 Ga0395901_0107431 3300038443 Bacteria 2929
64 Ga0395901_0140975 3300038443 Bacteria 2533
65 Ga0436365_0090224 3300039437 Bacteria 1793
66 Ga0436365_0182701 3300039437 Bacteria 4327
67 Ga0436365_0873035 3300039437 Bacteria 1817
68 Ga0436365_1273082 3300039437 Bacteria 11845
69 Ga0436363_0008252 3300039450 Bacteria 9170
70 Ga0436363_1246371 3300039450 Bacteria 11197
71 Ga0436362_0279908 3300039453 Bacteria 2847
72 Ga0436362_0523356 3300039453 Bacteria 1644
73 Ga0436362_0770738 3300039453 Bacteria 2057
74 Ga0436362_0795456 3300039453 Bacteria 868
75 Ga0466966_0019961 3300044684 Bacteria 4408
76 Ga0466963_0031129 3300044694 Bacteria 3447
77 Ga0466963_0081477 3300044694 Bacteria 2192
78 Ga0466957_0074254 3300044842 Bacteria 2108
79 Ga0466957_0081349 3300044842 Bacteria 2017
80 Ga0466959_0287603 3300045049 Bacteria 1127
81 Ga0451576_0089233 3300045051 Bacteria 3206
82 Ga0466958_0015771 3300045836 Bacteria 4339
83 Ga0466958_0043307 3300045836 Bacteria 2711
84 Ga0495629_0004327 3300046459 Bacteria 10645
85 Ga0495641_0019611 3300046461 Bacteria 3453
86 Ga0495651_0001052 3300046462 Bacteria 21348
87 Ga0495653_0058328 3300046463 Bacteria 2934
88 Ga0495582_0031312 3300046473 Bacteria 2923
89 Ga0495639_0010836 3300046475 Bacteria 3927
90 Ga0495662_0010024 3300046476 Bacteria 4649
91 Ga0495664_0009292 3300046477 Bacteria 5497
92 Ga0495618_0005128 3300046514 Bacteria 8001
93 Ga0495628_0070380 3300046516 Bacteria 2727
94 Ga0495630_0022863 3300046517 Bacteria 4617
95 Ga0495666_0024793 3300046526 Bacteria 2963
96 Ga0495665_0011714 3300046531 Bacteria 4751
97 Ga0495640_0070436 3300046533 Bacteria 2349
98 Ga0495586_0021805 3300046535 Bacteria 3418
99 Ga0495645_0003849 3300046543 Bacteria 10215
100 Ga0495645_0010516 3300046543 Bacteria 6489
101 Ga0495634_0065227 3300046642 Bacteria 2413
102 Ga0495657_0082088 3300046675 Bacteria 2083
103 Ga0495623_0125057 3300046679 Bacteria 1544
104 Ga0495646_0018027 3300046680 Bacteria 4470
105 Ga0495613_0015869 3300046689 Bacteria 5608
106 Ga0495624_0010943 3300046690 Bacteria 6253
107 Ga0495581_0004991 3300047315 Bacteria 7683
108 Ga0495604_0078393 3300047317 Bacteria 2479
109 Ga0495674_0238411 3300047319 Bacteria 1499
110 Ga0495680_0149410 3300047322 Bacteria 1704
111 Ga0495593_0020348 3300047673 Bacteria 3717
112 Ga0496110_0276098 3300048913 Bacteria 1530
113 Ga0496112_0201385 3300048915 Bacteria 1950
114 Ga0496115_0143914 3300048918 Bacteria 1967
115 Ga0496116_0000014 3300048919 Bacteria 569049
116 Ga0496117_0076511 3300048920 Bacteria 2219
117 Ga0496118_0122600 3300048921 Bacteria 1690
118 Ga0496119_0005088 3300048922 Bacteria 12765
119 nmdc:mga05p37_111869_c1 3300050507 Bacteria 3358
120 nmdc:mga09592_201573_c1 3300050508 Bacteria 1723
121 nmdc:mga0qj67_248006_c1 3300050509 Bacteria 1445
122 nmdc:mga0qj67_451178_c1 3300050509 Bacteria 1036
123 nmdc:mga06r32_117181_c1 3300050510 Bacteria 2625
124 nmdc:mga06r32_5671_c1 3300050510 Bacteria 11236
125 Ga0495601_0247339 3300053077 Bacteria 1164
126 Ga0500644_0006953 3300053088 Bacteria 2924
127 Ga0500644_0028077 3300053088 Bacteria 1757
128 Ga0500595_017968 3300053119 Bacteria 2596
129 Ga0590075_047775 3300059424 Bacteria 1097
130 Ga0466962_0093169 3300061719 Bacteria 1444
131 2753269265 2751185782 Bacteria 11227053
132 2855675136 2855670206 Bacteria 7120389
133 2855681173 2855676851 Bacteria 7063653
134 2857294085 2857288857 Bacteria 7189066
135 2858851755 2858848962 Bacteria 6963058
136 2858882747 2858882152 Bacteria 7230291
137 2858894921 2858888857 Bacteria 7060307
138 2858899929 2858895516 Bacteria 7378898
139 2862707237 2862705112 Bacteria 6563286
140 2869048492 2869048445 Bacteria 6875584
141 2869066266 2869061728 Bacteria 7112407
142 2884698905 2884693830 Bacteria 11273186
143 2895449294 2895442618 Bacteria 11027144
144 2929230459 2929226422 Bacteria 7248583
145 2996223157 2996221748 Bacteria 6799777
146 8008489731 8008485437 Bacteria 7198341
147 8025528693 8025524527 Bacteria 7197316
148 8054705617 8054704163 Bacteria 7247792
149 8054735511 8054734606 Bacteria 6947278
150 Ga0105245_10027185
151 JGI25405J52794_10031074
152 Ga0070683_100016837
153 Ga0070674_100308452
154 Ga0070711_100025560
155 Ga0070708_100000306
156 Ga0070707_100166645
157 Ga0070684_100005321
158 Ga0081455_10029001
159 Ga0081455_10063503
160 Ga0081455_10072327
161 Ga0081455_10190022
162 Ga0081538_10001599
163 Ga0081538_10003657
164 Ga0081538_10008913
165 Ga0081538_10012025
166 Ga0081538_10021794
167 Ga0081538_10035672
168 Ga0081538_10069982
169 Ga0081540_1001215
170 Ga0081539_10003872
171 Ga0081539_10057912
172 Ga0070717_10083577
173 Ga0075367_10021455
174 Ga0075428_100501542
175 Ga0075430_100249540
176 Ga0075431_100129294
177 Ga0075429_100005012
178 Ga0075436_100002386
179 Ga0111539_10805595
180 Ga0163162_10379144
181 Ga0163162_10635775
182 Ga0213874_10000472
183 Ga0213876_10006953
184 Ga0213876_10199116
185 Ga0207663_10018403
186 Ga0207664_10001482
187 Ga0207661_10011218
188 Ga0207678_10239405
189 Ga0207675_100839199
190 Ga0265329_10025758
191 Ga0265316_10188108
192 Ga0307406_10278185
193 Ga0307409_100067183
194 Ga0307411_10420658
195 Ga0307415_100463731
196 Ga0373923_0013041
197 Ga0373953_0019169
198 Ga0373956_0028951
199 Ga0373943_0038528
200 Ga0373935_0021442
201 Ga0373927_0031226
202 Ga0373927_0282209
203 Ga0373947_0030320
204 Ga0395899_0013055
205 Ga0395900_0002688
206 Ga0395900_0177523
207 Ga0395898_0002917
208 Ga0395898_0594562
209 Ga0395905_0001999
210 Ga0436364_0397395
211 Ga0395901_0056178
212 Ga0395901_0107431
213 Ga0395901_0140975
214 Ga0436365_0090224
215 Ga0436365_0182701
216 Ga0436365_0873035
217 Ga0436365_1273082
218 Ga0436363_0008252
219 Ga0436363_1246371
220 Ga0436362_0279908
221 Ga0436362_0523356
222 Ga0436362_0770738
223 Ga0436362_0795456
224 Ga0466966_0019961
225 Ga0466963_0031129
226 Ga0466963_0081477
227 Ga0466957_0074254
228 Ga0466957_0081349
229 Ga0466959_0287603
230 Ga0451576_0089233
231 Ga0466958_0015771
232 Ga0466958_0043307
233 Ga0495629_0004327
234 Ga0495641_0019611
235 Ga0495651_0001052
236 Ga0495653_0058328
237 Ga0495582_0031312
238 Ga0495639_0010836
239 Ga0495662_0010024
240 Ga0495664_0009292
241 Ga0495618_0005128
242 Ga0495628_0070380
243 Ga0495630_0022863
244 Ga0495666_0024793
245 Ga0495665_0011714
246 Ga0495640_0070436
247 Ga0495586_0021805
248 Ga0495645_0003849
249 Ga0495645_0010516
250 Ga0495634_0065227
251 Ga0495657_0082088
252 Ga0495623_0125057
253 Ga0495646_0018027
254 Ga0495613_0015869
255 Ga0495624_0010943
256 Ga0495581_0004991
257 Ga0495604_0078393
258 Ga0495674_0238411
259 Ga0495680_0149410
260 Ga0495593_0020348
261 Ga0496110_0276098
262 Ga0496112_0201385
263 Ga0496115_0143914
264 Ga0496116_0000014
265 Ga0496117_0076511
266 Ga0496118_0122600
267 Ga0496119_0005088
268 nmdc:mga05p37_111869_c1
269 nmdc:mga09592_201573_c1
270 nmdc:mga0qj67_248006_c1
271 nmdc:mga0qj67_451178_c1
272 nmdc:mga06r32_117181_c1
273 nmdc:mga06r32_5671_c1
274 Ga0495601_0247339
275 Ga0500644_0006953
276 Ga0500644_0028077
277 Ga0500595_017968
278 Ga0590075_047775
279 Ga0466962_0093169
280 2753269265
281 2855675136
282 2855681173
283 2857294085
284 2858851755
285 2858882747
286 2858894921
287 2858899929
288 2862707237
289 2869048492
290 2869066266
291 2884698905
292 2895449294
293 2929230459
294 2996223157
295 8008489731
296 8025528693
297 8054705617
298 8054735511

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08281

Sigma70_r4_2

Sigma-70, region 4

137

189

0.95

PF04542

Sigma70_r2

Sigma-70 region 2

40

106

0.9

Map