F198665

General Info

Members Datasets Scaffolds Average Seq Length
146 103 135 360

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0144724|Ga0501031_0144724_53_1201
Length 382
Sequence VKTGPLSIVVLGLSLSSSWGNGHATTYRALLKALAARGHHILFLERDVPWYAKHRDLVDPAFCRLELYADLTELAGHGAAMARADAVIVGSYVPDGVAVGQLVQSVARGVTAFYDIDTPVTLAKLERNDFEYLSPDLISGYDLYLSFTGGPTLQWIMERYGAPAAHALYCSVDPEAYAPLERPKRWDLSYLGTYSPDRQPTLERLLLEPARRAPHLKFVVAGPLYPAGLDWPPNVERIDHVAPAEHPAFYAASRFTLNVTRSDMIRAGYSPSVRLFEAAACGIPIISDVWDGIGTFFSPGREIALARDAADVIDVLTKWPKERAAALAAASRERVLGAHTAAHRARQLETFLLEAIDAASTRQTAQPAAQAAPVKRSIVPAG

Samples

Sample ID Description Type Environment
1 2773857925 Microvirga vignae BR3299 Isolate Unclassified
2 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
3 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
4 2855020534 Paracoccus endophyticus SYSUP0003 Isolate Stem Tuber
5 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
6 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
7 2882806704 Pelagerythrobacter rhizovicinus AY-3R Isolate Rhizosphere
8 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
9 2902330777 Methylobacterium sp. 2A Isolate Unclassified
10 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
11 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
12 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
60 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
61 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
62 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
63 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
64 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
65 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
73 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
74 3300044659 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2E Metagenome Unclassified
75 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
76 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
77 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
78 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
79 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
80 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
81 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
82 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
83 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
84 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
85 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
86 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
87 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
88 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
89 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
90 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
91 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
96 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
97 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
98 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
99 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
100 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
101 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
102 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
103 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.47
Metatranscriptomes 0
Isolates 7.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.68
Nodule 0
Rhizoplane 1.37
Rhizosphere 82.19
Stem 0
Stem Tuber 0.68
Unclassified 15.07

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10003379 3300003322 Bacteria 3908
2 rootH1_10250322 3300003323 Bacteria 4008
3 Ga0070658_10003283 3300005327 Bacteria 13349
4 Ga0070658_10003424 3300005327 Bacteria 13043
5 Ga0070668_100003366 3300005347 Bacteria 11790
6 Ga0070668_100012203 3300005347 Bacteria 6401
7 Ga0070668_100018478 3300005347 Bacteria 5234
8 Ga0070668_100029586 3300005347 Bacteria 4161
9 Ga0070669_100001263 3300005353 Bacteria 18356
10 Ga0070669_100054723 3300005353 Bacteria 2923
11 Ga0070671_100026311 3300005355 Bacteria 4780
12 Ga0070671_100047526 3300005355 Bacteria 3569
13 Ga0070671_100133680 3300005355 Bacteria 2090
14 Ga0070671_100376907 3300005355 Bacteria 1212
15 Ga0070667_100035026 3300005367 Bacteria 4204
16 Ga0070665_100001031 3300005548 Bacteria 34955
17 Ga0068855_100007319 3300005563 Bacteria 13375
18 Ga0068855_100129960 3300005563 Bacteria 2877
19 Ga0070664_100253585 3300005564 Bacteria 1582
20 Ga0068854_100002385 3300005578 Bacteria 11598
21 Ga0068856_100001197 3300005614 Bacteria 27340
22 Ga0068852_100000071 3300005616 Bacteria 70039
23 Ga0068852_100096941 3300005616 Bacteria 2652
24 Ga0068852_100153589 3300005616 Bacteria 2143
25 Ga0068859_100006319 3300005617 Bacteria 12014
26 Ga0068863_100000125 3300005841 Bacteria 80636
27 Ga0068863_100004037 3300005841 Bacteria 14491
28 Ga0068863_100126429 3300005841 Bacteria 2439
29 Ga0068858_100000025 3300005842 Bacteria 160546
30 Ga0068860_100421493 3300005843 Bacteria 1323
31 Ga0068862_100040853 3300005844 Bacteria 3944
32 Ga0068862_100050451 3300005844 Bacteria 3556
33 Ga0068862_100083192 3300005844 Bacteria 2779
34 Ga0097620_100006319 3300006931 Bacteria 12014
35 Ga0105251_10000231 3300009011 Bacteria 56229
36 Ga0105240_10001039 3300009093 Bacteria 49357
37 Ga0105248_10111140 3300009177 Bacteria 3090
38 Ga0105238_10037475 3300009551 Bacteria 4929
39 Ga0105239_10257353 3300010375 Bacteria 1961
40 Ga0157372_10044878 3300013307 Bacteria 4899
41 Ga0213872_10005241 3300021361 Bacteria 6706
42 Ga0213875_10000657 3300021388 Bacteria 27401
43 Ga0209148_1010385 3300025254 Bacteria 1770
44 Ga0207713_1000951 3300025735 Bacteria 25905
45 Ga0207705_10001571 3300025909 Bacteria 18141
46 Ga0207705_10002874 3300025909 Bacteria 13173
47 Ga0207695_10003176 3300025913 Bacteria 23421
48 Ga0207695_10163237 3300025913 Bacteria 2157
49 Ga0207681_10000774 3300025923 Bacteria 21043
50 Ga0207681_10201098 3300025923 Bacteria 1530
51 Ga0207694_10027805 3300025924 Bacteria 4309
52 Ga0207644_10002323 3300025931 Bacteria 12296
53 Ga0207644_10052012 3300025931 Bacteria 2943
54 Ga0207711_10006146 3300025941 Bacteria 10146
55 Ga0207711_10200389 3300025941 Bacteria 1821
56 Ga0207679_10236075 3300025945 Bacteria 1547
57 Ga0207667_10005586 3300025949 Bacteria 15346
58 Ga0207667_10009525 3300025949 Bacteria 11429
59 Ga0207668_10004394 3300025972 Bacteria 8282
60 Ga0207668_10009772 3300025972 Bacteria 5763
61 Ga0207668_10016320 3300025972 Bacteria 4632
62 Ga0207668_10066053 3300025972 Bacteria 2563
63 Ga0207640_10001203 3300025981 Bacteria 14131
64 Ga0207658_10043894 3300025986 Bacteria 3252
65 Ga0207703_10000105 3300026035 Bacteria 99702
66 Ga0207641_10000012 3300026088 Bacteria 375486
67 Ga0207641_10022214 3300026088 Bacteria 5222
68 Ga0207676_10000380 3300026095 Bacteria 37876
69 Ga0207698_10000062 3300026142 Bacteria 72806
70 Ga0207698_10019802 3300026142 Bacteria 4616
71 Ga0268266_10000534 3300028379 Bacteria 53027
72 Ga0268265_10014797 3300028380 Bacteria 5325
73 Ga0268265_10296330 3300028380 Bacteria 1454
74 Ga0268264_10036204 3300028381 Bacteria 4064
75 Ga0307408_100082693 3300031548 Bacteria 2404
76 Ga0307405_10108899 3300031731 Bacteria 1873
77 Ga0307410_10180796 3300031852 Bacteria 1597
78 Ga0307406_10136249 3300031901 Bacteria 1731
79 Ga0307412_10020581 3300031911 Bacteria 4017
80 Ga0307416_100161764 3300032002 Bacteria 2070
81 Ga0307414_10095372 3300032004 Bacteria 2223
82 Ga0307414_10110203 3300032004 Bacteria 2093
83 Ga0307414_10149193 3300032004 Bacteria 1842
84 Ga0307414_10234290 3300032004 Bacteria 1516
85 Ga0307414_10257747 3300032004 Bacteria 1454
86 Ga0395899_0000634 3300037312 Bacteria 36392
87 Ga0395899_0166488 3300037312 Bacteria 1555
88 Ga0395900_0000016 3300037418 Bacteria 382407
89 Ga0395900_0167157 3300037418 Bacteria 2241
90 Ga0395898_0018099 3300037466 Bacteria 7189
91 Ga0395898_0119077 3300037466 Bacteria 2529
92 Ga0395898_0467421 3300037466 Bacteria 1200
93 Ga0395905_0020285 3300037471 Bacteria 6298
94 Ga0395905_0025858 3300037471 Bacteria 5532
95 Ga0395905_0094169 3300037471 Bacteria 2810
96 Ga0395905_0098794 3300037471 Bacteria 2741
97 Ga0395905_0173701 3300037471 Bacteria 2023
98 Ga0436364_0560801 3300037853 Bacteria 2686
99 Ga0436364_1265123 3300037853 Bacteria 88807
100 Ga0436364_1445462 3300037853 Bacteria 1976
101 Ga0395901_0000022 3300038443 Bacteria 296356
102 Ga0395901_0206259 3300038443 Bacteria 2059
103 Ga0436365_0646826 3300039437 Bacteria 110896
104 Ga0436361_1110998 3300039447 Bacteria 21889
105 Ga0466973_0130767 3300044659 Bacteria 2039
106 Ga0466971_0019976 3300044719 Bacteria 2977
107 Ga0466968_0007440 3300044735 Bacteria 4164
108 Ga0466957_0177426 3300044842 Bacteria 1390
109 Ga0495606_0001692 3300046507 Bacteria 28473
110 Ga0495606_0006060 3300046507 Bacteria 11301
111 Ga0495597_0031079 3300046542 Bacteria 2431
112 Ga0496110_0261020 3300048913 Bacteria 1577
113 Ga0496114_0256149 3300048917 Bacteria 1540
114 Ga0496116_0025110 3300048919 Bacteria 4389
115 Ga0496117_0006352 3300048920 Bacteria 12006
116 Ga0496118_0000898 3300048921 Bacteria 46679
117 Ga0496121_0010881 3300048924 Bacteria 10170
118 Ga0496122_0029629 3300048925 Bacteria 4611
119 Ga0496125_0016294 3300048928 Bacteria 7142
120 Ga0496126_0214966 3300048929 Bacteria 1617
121 Ga0501290_005244 3300049513 Bacteria 1620
122 Ga0501300_001695 3300049523 Bacteria 3302
123 Ga0501031_0144724 3300049568 Bacteria 1553
124 Ga0501037_0195076 3300049573 Bacteria 1433
125 Ga0501042_0140170 3300049578 Bacteria 1743
126 Ga0501046_0063871 3300049580 Bacteria 2875
127 Ga0501071_0081163 3300049587 Bacteria 2373
128 Ga0501223_003387 3300049663 Bacteria 3481
129 Ga0501235_005968 3300049669 Bacteria 2652
130 Ga0501257_000088 3300049686 Bacteria 22688
131 Ga0501225_0004661 3300049705 Bacteria 4071
132 Ga0501280_003750 3300049776 Bacteria 2297
133 Ga0501045_0010004 3300049824 Bacteria 6633
134 Ga0501084_0045932 3300054114 Bacteria 3657
135 Ga0466962_0103384 3300061719 Bacteria 1368

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037466 Ga0395898_0467421 Ga0395898_0467421_16_1017 319
2 3300025254 Ga0209148_1010385 Ga0209148_10103853 322
3 3300049705 Ga0501225_0004661 Ga0501225_0004661_1276_2355 325
4 3300021388 Ga0213875_10000657 Ga0213875_1000065718 331
5 3300037853 Ga0436364_1265123 Ga0436364_1265123_49718_50794 331
6 3300005616 Ga0068852_100096941 Ga0068852_1000969411 335
7 3300025913 Ga0207695_10163237 Ga0207695_101632373 335
8 3300025949 Ga0207667_10009525 Ga0207667_100095254 335
9 3300005327 Ga0070658_10003283 Ga0070658_100032834 337
10 3300005347 Ga0070668_100029586 Ga0070668_1000295863 337
11 3300005563 Ga0068855_100007319 Ga0068855_10000731913 337
12 3300005578 Ga0068854_100002385 Ga0068854_1000023855 337
13 3300005614 Ga0068856_100001197 Ga0068856_1000011977 337
14 3300005616 Ga0068852_100000071 Ga0068852_10000007151 337
15 3300005616 Ga0068852_100153589 Ga0068852_1001535892 337
16 3300005617 Ga0068859_100006319 Ga0068859_1000063193 337
17 3300006931 Ga0097620_100006319 Ga0097620_10000631912 337
18 3300009093 Ga0105240_10001039 Ga0105240_1000103929 337
19 3300009551 Ga0105238_10037475 Ga0105238_100374753 337
20 3300025909 Ga0207705_10001571 Ga0207705_100015714 337
21 3300025913 Ga0207695_10003176 Ga0207695_1000317619 337
22 3300025924 Ga0207694_10027805 Ga0207694_100278054 337
23 3300025941 Ga0207711_10200389 Ga0207711_102003892 337
24 3300025949 Ga0207667_10005586 Ga0207667_100055869 337
25 3300025972 Ga0207668_10066053 Ga0207668_100660532 337
26 3300025981 Ga0207640_10001203 Ga0207640_100012036 337
27 3300026142 Ga0207698_10000062 Ga0207698_1000006222 337
28 3300026142 Ga0207698_10019802 Ga0207698_100198022 337
29 3300048913 Ga0496110_0261020 Ga0496110_0261020_470_1513 337
30 3300048917 Ga0496114_0256149 Ga0496114_0256149_433_1476 337
31 3300010375 Ga0105239_10257353 Ga0105239_102573532 341
32 3300049573 Ga0501037_0195076 Ga0501037_0195076_219_1358 341
33 3300025931 Ga0207644_10052012 Ga0207644_100520122 343
34 3300049776 Ga0501280_003750 Ga0501280_003750_864_1928 343
35 3300044659 Ga0466973_0130767 Ga0466973_0130767_245_1363 344
36 3300005355 Ga0070671_100376907 Ga0070671_1003769071 345
37 3300005841 Ga0068863_100126429 Ga0068863_1001264292 345
38 3300005843 Ga0068860_100421493 Ga0068860_1004214932 345
39 3300026088 Ga0207641_10022214 Ga0207641_100222142 345
40 iso_pu_bacteria 2842914999 2842917931 345
41 iso_pu_bacteria 2848297114 2848298550 345
42 3300005347 Ga0070668_100018478 Ga0070668_1000184783 346
43 3300005353 Ga0070669_100054723 Ga0070669_1000547233 346
44 3300005355 Ga0070671_100026311 Ga0070671_1000263112 346
45 3300005564 Ga0070664_100253585 Ga0070664_1002535852 346
46 3300005844 Ga0068862_100050451 Ga0068862_1000504512 346
47 3300009177 Ga0105248_10111140 Ga0105248_101111403 346
48 3300025923 Ga0207681_10201098 Ga0207681_102010982 346
49 3300025972 Ga0207668_10004394 Ga0207668_100043945 346
50 3300028380 Ga0268265_10014797 Ga0268265_100147972 346
51 3300048920 Ga0496117_0006352 Ga0496117_0006352_796_1866 346
52 3300048921 Ga0496118_0000898 Ga0496118_0000898_29536_30606 346
53 3300005347 Ga0070668_100012203 Ga0070668_1000122032 347
54 3300005844 Ga0068862_100083192 Ga0068862_1000831923 347
55 3300025972 Ga0207668_10009772 Ga0207668_100097722 347
56 3300028380 Ga0268265_10296330 Ga0268265_102963302 347
57 3300044735 Ga0466968_0007440 Ga0466968_0007440_1425_2525 347
58 iso_pu_bacteria 2857504554 2857507667 347
59 iso_pu_bacteria 2882806704 2882806970 347
60 3300031731 Ga0307405_10108899 Ga0307405_101088992 348
61 3300031901 Ga0307406_10136249 Ga0307406_101362492 348
62 3300032004 Ga0307414_10110203 Ga0307414_101102032 348
63 3300032004 Ga0307414_10234290 Ga0307414_102342902 348
64 3300005355 Ga0070671_100047526 Ga0070671_1000475263 349
65 3300013307 Ga0157372_10044878 Ga0157372_100448782 349
66 3300037853 Ga0436364_1445462 Ga0436364_1445462_866_1945 349
67 3300046507 Ga0495606_0006060 Ga0495606_0006060_6387_7478 349
68 3300049669 Ga0501235_005968 Ga0501235_005968_778_1857 349
69 3300005563 Ga0068855_100129960 Ga0068855_1001299602 350
70 3300031911 Ga0307412_10020581 Ga0307412_100205813 350
71 3300032002 Ga0307416_100161764 Ga0307416_1001617642 350
72 3300039437 Ga0436365_0646826 Ga0436365_0646826_9983_11074 350
73 3300005347 Ga0070668_100003366 Ga0070668_1000033664 351
74 3300005353 Ga0070669_100001263 Ga0070669_1000012638 351
75 3300005355 Ga0070671_100133680 Ga0070671_1001336802 351
76 3300005367 Ga0070667_100035026 Ga0070667_1000350264 351
77 3300005548 Ga0070665_100001031 Ga0070665_10000103113 351
78 3300005841 Ga0068863_100004037 Ga0068863_10000403712 351
79 3300005844 Ga0068862_100040853 Ga0068862_1000408532 351
80 3300009011 Ga0105251_10000231 Ga0105251_1000023140 351
81 3300025735 Ga0207713_1000951 Ga0207713_100095110 351
82 3300025923 Ga0207681_10000774 Ga0207681_1000077414 351
83 3300025931 Ga0207644_10002323 Ga0207644_100023237 351
84 3300025945 Ga0207679_10236075 Ga0207679_102360752 351
85 3300025972 Ga0207668_10016320 Ga0207668_100163203 351
86 3300025986 Ga0207658_10043894 Ga0207658_100438942 351
87 3300028379 Ga0268266_10000534 Ga0268266_1000053443 351
88 3300028381 Ga0268264_10036204 Ga0268264_100362042 351
89 3300031548 Ga0307408_100082693 Ga0307408_1000826932 351
90 3300031852 Ga0307410_10180796 Ga0307410_101807962 351
91 3300032004 Ga0307414_10095372 Ga0307414_100953722 351
92 3300037471 Ga0395905_0098794 Ga0395905_0098794_827_1915 351
93 3300037471 Ga0395905_0173701 Ga0395905_0173701_339_1427 351
94 3300046542 Ga0495597_0031079 Ga0495597_0031079_211_1302 351
95 3300048919 Ga0496116_0025110 Ga0496116_0025110_1313_2398 351
96 3300048924 Ga0496121_0010881 Ga0496121_0010881_5189_6274 351
97 3300048925 Ga0496122_0029629 Ga0496122_0029629_214_1299 351
98 3300048928 Ga0496125_0016294 Ga0496125_0016294_1915_3000 351
99 3300048929 Ga0496126_0214966 Ga0496126_0214966_459_1544 351
100 iso_pu_bacteria 2855020534 2855020697 351
101 iso_pu_bacteria 2899259804 2899261486 351
102 3300037312 Ga0395899_0000634 Ga0395899_0000634_33299_34399 352
103 3300037418 Ga0395900_0000016 Ga0395900_0000016_29445_30545 352
104 3300037466 Ga0395898_0018099 Ga0395898_0018099_544_1644 352
105 3300037471 Ga0395905_0025858 Ga0395905_0025858_3953_5053 352
106 3300038443 Ga0395901_0000022 Ga0395901_0000022_67525_68625 352
107 3300046507 Ga0495606_0001692 Ga0495606_0001692_15859_16956 352
108 iso_pu_bacteria 2773857925 2774868984 352
109 iso_pu_bacteria 2882456835 2882457448 352
110 iso_pu_bacteria 2902330777 2902331462 352
111 iso_pu_bacteria 2919450847 2919456052 352
112 3300003323 rootH1_10250322 rootH1_102503223 353
113 3300005327 Ga0070658_10003424 Ga0070658_100034248 354
114 3300025909 Ga0207705_10002874 Ga0207705_100028744 354
115 3300032004 Ga0307414_10149193 Ga0307414_101491932 354
116 3300037312 Ga0395899_0166488 Ga0395899_0166488_225_1331 354
117 3300037418 Ga0395900_0167157 Ga0395900_0167157_1104_2210 354
118 3300037466 Ga0395898_0119077 Ga0395898_0119077_1216_2322 354
119 3300037471 Ga0395905_0020285 Ga0395905_0020285_1644_2750 354
120 3300037471 Ga0395905_0094169 Ga0395905_0094169_1043_2149 354
121 3300044842 Ga0466957_0177426 Ga0466957_0177426_130_1230 354
122 3300038443 Ga0395901_0206259 Ga0395901_0206259_942_2045 355
123 3300044719 Ga0466971_0019976 Ga0466971_0019976_1493_2596 355
124 3300049513 Ga0501290_005244 Ga0501290_005244_165_1280 355
125 3300049523 Ga0501300_001695 Ga0501300_001695_379_1494 355
126 3300049663 Ga0501223_003387 Ga0501223_003387_582_1697 355
127 3300049686 Ga0501257_000088 Ga0501257_000088_13302_14417 355
128 3300061719 Ga0466962_0103384 Ga0466962_0103384_41_1144 355
129 3300003322 rootL2_10003379 rootL2_100033796 356
130 3300005841 Ga0068863_100000125 Ga0068863_1000001258 356
131 3300005842 Ga0068858_100000025 Ga0068858_10000002566 356
132 3300021361 Ga0213872_10005241 Ga0213872_100052415 356
133 3300025941 Ga0207711_10006146 Ga0207711_100061467 356
134 3300026035 Ga0207703_10000105 Ga0207703_1000010549 356
135 3300026088 Ga0207641_10000012 Ga0207641_10000012315 356
136 3300026095 Ga0207676_10000380 Ga0207676_100003802 356
137 3300032004 Ga0307414_10257747 Ga0307414_102577471 356
138 3300037853 Ga0436364_0560801 Ga0436364_0560801_756_1871 356
139 3300039447 Ga0436361_1110998 Ga0436361_1110998_3618_4757 356
140 3300049568 Ga0501031_0144724 Ga0501031_0144724_53_1201 356
141 3300049578 Ga0501042_0140170 Ga0501042_0140170_494_1642 356
142 3300049580 Ga0501046_0063871 Ga0501046_0063871_95_1243 356
143 3300049587 Ga0501071_0081163 Ga0501071_0081163_1145_2293 356
144 3300049824 Ga0501045_0010004 Ga0501045_0010004_117_1265 356
145 3300054114 Ga0501084_0045932 Ga0501084_0045932_700_1848 356
146 iso_pu_bacteria 2902405164 2902405477 356

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13524

Glyco_trans_1_2

Glycosyl transferases group 1

198

350

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3mbo-assembly1.cif.gz_A crystal structure of the glycosyltransferase babsha bound with udp and l-malate 0.7609 1 338
3mbo-assembly2.cif.gz_C crystal structure of the glycosyltransferase babsha bound with udp and l-malate 0.7554 2 338
2f9f-assembly1.cif.gz_A crystal structure of the putative mannosyl transferase (wbaz-1)from archaeoglobus fulgidus, northeast structural genomics target gr29a. 0.7473 167 319
6ejj-assembly1.cif.gz_A structure of a glycosyltransferase / state 2 0.7414 1 338
3mbo-assembly4.cif.gz_H crystal structure of the glycosyltransferase babsha bound with udp and l-malate 0.7381 1 338
ID Description Score Start End Superfamily
af_I1J850_294_457_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7773 183 315 3.40.50.2000
af_Q9SSP6_536_651_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7502 232 319 3.40.50.2000
2f9fA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7356 167 319 3.40.50.2000
af_Q2G1K0_190_352_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7226 183 319 3.40.50.2000
af_P9WMZ3_200_365_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7158 184 319 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A6J4M9T6-F1-model_v4 Spore_germination_protein_CgeB 0.9859 1 157
AF-A0A3D1AUV2-F1-model_v4 Phosphoglycerate mutase 0.983 1 130 GO:0005737
GO:0016791
AF-A0A527HJH9-F1-model_v4 Glycosyltransferase 0.9815 2 86 GO:0016740
AF-A0A7W2BRD8-F1-model_v4 deleted 0.9782 2 235
AF-A0A6M8HT08-F1-model_v4 Glycosyltransferase 0.9774 1 334 GO:0016740

Feature Viewer

pLDDT pTM Quality
91.73 0.9 High
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Predicted Structure (AlphaFold2)

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