F193206

General Info

Members Datasets Scaffolds Average Seq Length
144 93 289 134

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2799112218|2799185536
Length 136
Sequence TATRPAGARSIADVLAEARSRLVRLGPLEAHAAWQQGALLVDIRPAAQRALEGEVPGALVIERNVLEWRLDPASEARLPVAAYDLQVVVLCSEGYTSSLAAASLQDLGVHRATDLVGGFKAWRAVGLPTTGGRSAP

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
55 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
56 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
57 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
58 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
59 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
60 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
61 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
62 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
68 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
69 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
70 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
71 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
72 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
73 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
74 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
75 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
76 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
77 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
78 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
79 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
80 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
81 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
82 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
83 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
84 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
87 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
88 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
89 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
90 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
91 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
92 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
93 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.53
Metatranscriptomes 0
Isolates 3.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.86
Rhizosphere 92.36
Stem 0
Stem Tuber 0
Unclassified 10.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2416390 2162886007 Bacteria 1551
2 rootH1_10016333 3300003316 Bacteria 16704
3 rootH1_10016333 3300003323 Bacteria 2131
4 Ga0065704_10104874 3300005289 Bacteria 2127
5 Ga0065707_10106664 3300005295 Bacteria 2586
6 Ga0070683_101497885 3300005329 Bacteria 649
7 Ga0070682_100380698 3300005337 Bacteria 1061
8 Ga0070682_100474228 3300005337 Bacteria 964
9 Ga0070682_100503229 3300005337 Bacteria 939
10 Ga0070682_100839976 3300005337 Bacteria 749
11 Ga0068868_100099794 3300005338 Bacteria 2349
12 Ga0070668_100219045 3300005347 Bacteria 1569
13 Ga0070675_101448880 3300005354 Bacteria 633
14 Ga0070673_100446990 3300005364 Bacteria 1162
15 Ga0070659_101127532 3300005366 Bacteria 692
16 Ga0070710_10583750 3300005437 Bacteria 776
17 Ga0070708_100059563 3300005445 Bacteria 3405
18 Ga0070708_100154181 3300005445 Unclassified 2138
19 Ga0070708_100171900 3300005445 Unclassified 2023
20 Ga0070708_100191550 3300005445 Bacteria 1912
21 Ga0070708_100324445 3300005445 Bacteria 1451
22 Ga0070708_100585416 3300005445 Unclassified 1052
23 Ga0070663_101046088 3300005455 Unclassified 712
24 Ga0070706_100064205 3300005467 Bacteria 3393
25 Ga0070706_100244486 3300005467 Unclassified 1675
26 Ga0070707_100503864 3300005468 Unclassified 1172
27 Ga0070707_101602768 3300005468 Unclassified 618
28 Ga0070699_101156066 3300005518 Unclassified 710
29 Ga0070699_101285361 3300005518 Unclassified 671
30 Ga0070679_100234380 3300005530 Bacteria 1795
31 Ga0070684_100301974 3300005535 Bacteria 1469
32 Ga0070684_100625340 3300005535 Bacteria 1002
33 Ga0070697_100453380 3300005536 Bacteria 1117
34 Ga0070697_100576291 3300005536 Bacteria 988
35 Ga0070697_101763373 3300005536 Unclassified 554
36 Ga0068853_101201042 3300005539 Bacteria 732
37 Ga0070664_101517119 3300005564 Bacteria 634
38 Ga0068854_101573400 3300005578 Bacteria 598
39 Ga0068852_100841708 3300005616 Bacteria 933
40 Ga0068866_10317302 3300005718 Bacteria 979
41 Ga0081539_10009184 3300005985 Bacteria 8333
42 Ga0081539_10066560 3300005985 Unclassified 1952
43 Ga0068871_101995074 3300006358 Bacteria 552
44 Ga0075433_10183221 3300006852 Bacteria 1863
45 Ga0068865_100203560 3300006881 Bacteria 1538
46 Ga0105245_10011393 3300009098 Bacteria 7743
47 Ga0105245_10417021 3300009098 Bacteria 1345
48 Ga0105245_10533566 3300009098 Bacteria 1194
49 Ga0105245_11579665 3300009098 Bacteria 708
50 Ga0114129_10353563 3300009147 Bacteria 1946
51 Ga0105243_10127091 3300009148 Bacteria 2158
52 Ga0105243_10994233 3300009148 Bacteria 841
53 Ga0105238_10289250 3300009551 Bacteria 1621
54 Ga0105238_11903422 3300009551 Bacteria 628
55 Ga0105249_10533537 3300009553 Bacteria 1222
56 Ga0157369_11721789 3300013105 Bacteria 637
57 Ga0157374_10032125 3300013296 Bacteria 4777
58 Ga0157378_11247299 3300013297 Bacteria 784
59 Ga0157378_12563753 3300013297 Unclassified 562
60 Ga0157378_12663612 3300013297 Bacteria 552
61 Ga0157372_10160801 3300013307 Bacteria 2595
62 Ga0157372_10193010 3300013307 Bacteria 2359
63 Ga0157372_10922057 3300013307 Bacteria 1013
64 Ga0157372_13001355 3300013307 Bacteria 539
65 Ga0157372_13158219 3300013307 Bacteria 526
66 Ga0157375_10181485 3300013308 Bacteria 2256
67 Ga0163163_10144132 3300014325 Bacteria 2425
68 Ga0207680_11305484 3300025903 Unclassified 516
69 Ga0207684_10111881 3300025910 Bacteria 2337
70 Ga0207684_10266580 3300025910 Bacteria 1478
71 Ga0207657_10421330 3300025919 Bacteria 1049
72 Ga0207646_10674368 3300025922 Bacteria 925
73 Ga0207646_11023018 3300025922 Unclassified 729
74 Ga0207687_10151177 3300025927 Bacteria 1772
75 Ga0207687_10156278 3300025927 Bacteria 1745
76 Ga0207687_10541893 3300025927 Bacteria 975
77 Ga0207709_10036133 3300025935 Bacteria 2926
78 Ga0207661_10324965 3300025944 Bacteria 1384
79 Ga0207661_11432081 3300025944 Bacteria 634
80 Ga0207668_10119614 3300025972 Bacteria 1992
81 Ga0207668_10831743 3300025972 Bacteria 819
82 Ga0207703_10084047 3300026035 Bacteria 2661
83 Ga0207639_12047781 3300026041 Bacteria 534
84 Ga0207678_10386854 3300026067 Bacteria 1210
85 Ga0207678_10623503 3300026067 Bacteria 946
86 Ga0207698_10778099 3300026142 Bacteria 958
87 Ga0210002_1083974 3300027617 Unclassified 568
88 Ga0209974_10014518 3300027876 Bacteria 2621
89 Ga0307513_10515679 3300031456 Bacteria 911
90 Ga0307405_10209999 3300031731 Bacteria 1420
91 Ga0307410_10459260 3300031852 Bacteria 1040
92 Ga0307407_10354882 3300031903 Bacteria 1039
93 Ga0307412_10052877 3300031911 Bacteria 2691
94 Ga0307409_100164159 3300031995 Bacteria 1946
95 Ga0307415_101264987 3300032126 Bacteria 698
96 Ga0307415_101382685 3300032126 Bacteria 669
97 Ga0373925_0170557 3300037068 Bacteria 1718
98 Ga0395900_0483104 3300037418 Bacteria 1191
99 Ga0395900_0693893 3300037418 Bacteria 952
100 Ga0395900_0754550 3300037418 Bacteria 903
101 Ga0395898_0053481 3300037466 Bacteria 3944
102 Ga0395905_1077697 3300037471 Bacteria 707
103 Ga0395901_0009288 3300038443 Bacteria 9967
104 Ga0395901_1401575 3300038443 Bacteria 657
105 Ga0436362_0481053 3300039453 Bacteria 877
106 Ga0466965_0402070 3300044683 Bacteria 757
107 Ga0466965_0848324 3300044683 Bacteria 531
108 Ga0466966_0068310 3300044684 Bacteria 2231
109 Ga0466961_0366230 3300044693 Bacteria 876
110 Ga0466963_0049046 3300044694 Bacteria 2791
111 Ga0466971_0669341 3300044719 Bacteria 520
112 Ga0466970_0061437 3300044765 Bacteria 2013
113 Ga0466970_0420969 3300044765 Bacteria 764
114 Ga0466970_0541368 3300044765 Bacteria 672
115 Ga0466970_0725929 3300044765 Bacteria 580
116 Ga0466957_0060503 3300044842 Bacteria 2322
117 Ga0466957_0403522 3300044842 Bacteria 935
118 Ga0466957_0495350 3300044842 Bacteria 847
119 Ga0466960_0215045 3300044901 Bacteria 1055
120 Ga0466960_0286405 3300044901 Bacteria 925
121 Ga0466960_0366290 3300044901 Bacteria 825
122 Ga0466960_0554614 3300044901 Bacteria 678
123 Ga0466959_0125527 3300045049 Bacteria 1822
124 Ga0466958_0075558 3300045836 Bacteria 2067
125 Ga0466958_0092280 3300045836 Bacteria 1874
126 Ga0466967_0094134 3300045976 Bacteria 2727
127 Ga0466967_0123975 3300045976 Bacteria 2391
128 Ga0466967_0130273 3300045976 Bacteria 2334
129 Ga0466967_0740743 3300045976 Bacteria 974
130 Ga0495663_0396772 3300046525 Bacteria 507
131 Ga0495588_0623075 3300046674 Bacteria 565
132 Ga0496106_0289996 3300048909 Bacteria 1312
133 Ga0496108_0162274 3300048911 Bacteria 1932
134 Ga0496108_0698243 3300048911 Bacteria 880
135 Ga0496109_0882607 3300048912 Bacteria 832
136 Ga0496110_0249537 3300048913 Bacteria 1615
137 Ga0496112_0584843 3300048915 Bacteria 1049
138 Ga0496114_0160694 3300048917 Bacteria 1953
139 nmdc:mga05p37_388391_c1 3300050507 Bacteria 1633
140 Ga0466962_0064006 3300061719 Bacteria 1756
141 2799185536 2799112218 Bacteria 4315149
142 2515853815 2515154155 Bacteria 7985436
143 2644670434 2643221722 Bacteria 4247614
144 2837183403 2837183177 Bacteria 4637169
145 2884995835 2884994152 Bacteria 4492978
146 SwRhRL2b_contig_2416390
147 rootH1_10016333
148 Ga0065704_10104874
149 Ga0065707_10106664
150 Ga0070683_101497885
151 Ga0070682_100380698
152 Ga0070682_100474228
153 Ga0070682_100503229
154 Ga0070682_100839976
155 Ga0068868_100099794
156 Ga0070668_100219045
157 Ga0070675_101448880
158 Ga0070673_100446990
159 Ga0070659_101127532
160 Ga0070710_10583750
161 Ga0070708_100059563
162 Ga0070708_100154181
163 Ga0070708_100171900
164 Ga0070708_100191550
165 Ga0070708_100324445
166 Ga0070708_100585416
167 Ga0070663_101046088
168 Ga0070706_100064205
169 Ga0070706_100244486
170 Ga0070707_100503864
171 Ga0070707_101602768
172 Ga0070699_101156066
173 Ga0070699_101285361
174 Ga0070679_100234380
175 Ga0070684_100301974
176 Ga0070684_100625340
177 Ga0070697_100453380
178 Ga0070697_100576291
179 Ga0070697_101763373
180 Ga0068853_101201042
181 Ga0070664_101517119
182 Ga0068854_101573400
183 Ga0068852_100841708
184 Ga0068866_10317302
185 Ga0081539_10009184
186 Ga0081539_10066560
187 Ga0068871_101995074
188 Ga0075433_10183221
189 Ga0068865_100203560
190 Ga0105245_10011393
191 Ga0105245_10417021
192 Ga0105245_10533566
193 Ga0105245_11579665
194 Ga0114129_10353563
195 Ga0105243_10127091
196 Ga0105243_10994233
197 Ga0105238_10289250
198 Ga0105238_11903422
199 Ga0105249_10533537
200 Ga0157369_11721789
201 Ga0157374_10032125
202 Ga0157378_11247299
203 Ga0157378_12563753
204 Ga0157378_12663612
205 Ga0157372_10160801
206 Ga0157372_10193010
207 Ga0157372_10922057
208 Ga0157372_13001355
209 Ga0157372_13158219
210 Ga0157375_10181485
211 Ga0163163_10144132
212 Ga0207680_11305484
213 Ga0207684_10111881
214 Ga0207684_10266580
215 Ga0207657_10421330
216 Ga0207646_10674368
217 Ga0207646_11023018
218 Ga0207687_10151177
219 Ga0207687_10156278
220 Ga0207687_10541893
221 Ga0207709_10036133
222 Ga0207661_10324965
223 Ga0207661_11432081
224 Ga0207668_10119614
225 Ga0207668_10831743
226 Ga0207703_10084047
227 Ga0207639_12047781
228 Ga0207678_10386854
229 Ga0207678_10623503
230 Ga0207698_10778099
231 Ga0210002_1083974
232 Ga0209974_10014518
233 Ga0307513_10515679
234 Ga0307405_10209999
235 Ga0307410_10459260
236 Ga0307407_10354882
237 Ga0307412_10052877
238 Ga0307409_100164159
239 Ga0307415_101264987
240 Ga0307415_101382685
241 Ga0373925_0170557
242 Ga0395900_0483104
243 Ga0395900_0693893
244 Ga0395900_0754550
245 Ga0395898_0053481
246 Ga0395905_1077697
247 Ga0395901_0009288
248 Ga0395901_1401575
249 Ga0436362_0481053
250 Ga0466965_0402070
251 Ga0466965_0848324
252 Ga0466966_0068310
253 Ga0466961_0366230
254 Ga0466963_0049046
255 Ga0466971_0669341
256 Ga0466970_0061437
257 Ga0466970_0420969
258 Ga0466970_0541368
259 Ga0466970_0725929
260 Ga0466957_0060503
261 Ga0466957_0403522
262 Ga0466957_0495350
263 Ga0466960_0215045
264 Ga0466960_0286405
265 Ga0466960_0366290
266 Ga0466960_0554614
267 Ga0466959_0125527
268 Ga0466958_0075558
269 Ga0466958_0092280
270 Ga0466967_0094134
271 Ga0466967_0123975
272 Ga0466967_0130273
273 Ga0466967_0740743
274 Ga0495663_0396772
275 Ga0495588_0623075
276 Ga0496106_0289996
277 Ga0496108_0162274
278 Ga0496108_0698243
279 Ga0496109_0882607
280 Ga0496110_0249537
281 Ga0496112_0584843
282 Ga0496114_0160694
283 nmdc:mga05p37_388391_c1
284 Ga0466962_0064006
285 2799185536
286 2515853815
287 2644670434
288 2837183403
289 2884995835

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00581

Rhodanese

Rhodanese-like domain

27

125

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tp9-assembly1.cif.gz_B crystal structure of alicyclobacillus acidocaldarius protein with beta-lactamase and rhodanese domains 0.939 43 145
3hix-assembly1.cif.gz_A crystal structure of the rhodanese_3 like domain from anabaena sp alr3790 protein. northeast structural genomics consortium target nsr437i 0.9287 61 145
2jts-assembly1.cif.gz_A rhodanese with anions from e. coli 0.9278 60 146
3hix-assembly3.cif.gz_C crystal structure of the rhodanese_3 like domain from anabaena sp alr3790 protein. northeast structural genomics consortium target nsr437i 0.9275 61 146
3k9r-assembly1.cif.gz_C-2 x-ray structure of the rhodanese-like domain of the alr3790 protein from anabaena sp. northeast structural genomics consortium target nsr437c. 0.9239 61 146
ID Description Score Start End Superfamily
af_Q38853_56_181_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9359 43 145 3.40.250.10
3tp9B03 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9304 44 145 3.40.250.10
2jtsA00 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9278 60 146 3.40.250.10
3tp9B03 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.913 44 145 3.40.250.10
1gmxA00 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9114 43 140 3.40.250.10
ID Description Score Start End GO Terms
AF-A0A2V6ACE6-F1-model_v4 Sulfurtransferase 0.9983 59 146 GO:0016740
AF-A0A2V6L0V4-F1-model_v4 Sulfurtransferase 0.9953 38 146 GO:0004792
AF-B3E0X8-F1-model_v4 Rhodanese-related sulfurtransferase 0.9834 32 145 GO:0016740
AF-A0A1H2G749-F1-model_v4 Rhodanese-related sulfurtransferase 0.9813 32 145 GO:0004792
AF-A0A2V6L0V4-F1-model_v4 Sulfurtransferase 0.9774 38 146 GO:0004792

Map