F189585

General Info

Members Datasets Scaffolds Average Seq Length
143 89 143 311

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0087088|Ga0453684_0087088_2066_3154
Length 362
Sequence MFPTCRAKTFLEEKPLNRIIRIDIERRHTMKDEFTVRFWGVRGSYPAPGTGTIKYGGNTSCVEINAGGRAIILDAGTGIIPLGRELMKRATQEKHGLELLLLFSHLHHDHTQGFPFFVPAYIPNTSLNIFGPGGTPETLKHVLDHNQSAETFPVRLREMSAAKKIRSVNEAQLIVWDEDGIRAAETEAKVSADAVVIRIYKSHAHPGNVYVYRITYRGKSIVYATDTEGYSGTDRKLVNFARGADVLIHDAQYSEEHYYGTLAGFPATQGYGHSTAKMAGEVAAACGAGELLLFHHEPAYTDEQVTAQELRAKEIFANTRAAYEGLNIALPFPPASSNEREVKYVPYDRDQKRRYPQPAVGH

Samples

Sample ID Description Type Environment
1 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
2 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
3 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
4 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
29 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
39 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
40 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
42 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
45 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
46 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
47 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
48 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
49 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
50 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
51 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
52 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
53 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
54 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
55 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
56 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
57 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
58 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
59 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
60 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
61 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
62 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
63 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
64 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
65 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
66 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
67 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
68 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
74 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
75 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
76 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
77 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
78 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
79 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
80 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
81 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
83 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
84 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
85 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
86 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
87 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
88 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
89 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.3
Metatranscriptomes 0.7
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10001874 3300005295 Bacteria 5591
2 Ga0070713_100103759 3300005436 Unclassified 2467
3 Ga0070700_100025089 3300005441 Unclassified 3508
4 Ga0070708_100033430 3300005445 Bacteria 4467
5 Ga0070708_100041258 3300005445 Unclassified 4046
6 Ga0070706_100005034 3300005467 Bacteria 12637
7 Ga0070707_100006990 3300005468 Bacteria 10464
8 Ga0070707_100039807 3300005468 Bacteria 4494
9 Ga0070698_100010972 3300005471 Bacteria 9640
10 Ga0070698_100103244 3300005471 Bacteria 2821
11 Ga0070699_100012306 3300005518 Bacteria 7381
12 Ga0070679_100208854 3300005530 Bacteria 1917
13 Ga0070697_100030875 3300005536 Bacteria 4306
14 Ga0070696_100160698 3300005546 Bacteria 1655
15 Ga0070704_100068021 3300005549 Bacteria 2575
16 Ga0068857_100088993 3300005577 Bacteria 2762
17 Ga0068859_100024693 3300005617 Bacteria 6031
18 Ga0068864_100209873 3300005618 Bacteria 1793
19 Ga0068862_100016760 3300005844 Bacteria 6100
20 Ga0068862_100334531 3300005844 Bacteria 1401
21 Ga0070717_10018140 3300006028 Bacteria 5491
22 Ga0070717_10058799 3300006028 Bacteria 3179
23 Ga0070712_100388216 3300006175 Unclassified 1151
24 Ga0075428_100176123 3300006844 Bacteria 2316
25 Ga0075433_10209098 3300006852 Unclassified 1734
26 Ga0075434_100194220 3300006871 Unclassified 2050
27 Ga0075429_100002728 3300006880 Bacteria 14902
28 Ga0075429_100074336 3300006880 Bacteria 2960
29 Ga0097620_100024695 3300006931 Bacteria 6031
30 Ga0111539_10023772 3300009094 Bacteria 7529
31 Ga0114129_10046193 3300009147 Bacteria 6121
32 Ga0114129_10050677 3300009147 Bacteria 5831
33 Ga0114129_10102511 3300009147 Bacteria 3958
34 Ga0114129_10476746 3300009147 Unclassified 1633
35 Ga0105242_10073984 3300009176 Bacteria 2834
36 Ga0157378_10012448 3300013297 Bacteria 7448
37 Ga0163162_10012809 3300013306 Bacteria 8193
38 Ga0224712_10034088 3300022467 Unclassified 1869
39 Ga0207684_10018247 3300025910 Bacteria 6009
40 Ga0207684_10167041 3300025910 Bacteria 1896
41 Ga0207693_10280879 3300025915 Unclassified 1305
42 Ga0207652_10038034 3300025921 Bacteria 4076
43 Ga0207646_10008042 3300025922 Bacteria 10632
44 Ga0207646_10540846 3300025922 Bacteria 1048
45 Ga0207700_10063174 3300025928 Unclassified 2815
46 Ga0207712_10299667 3300025961 Bacteria 1319
47 Ga0207708_10041275 3300026075 Unclassified 3517
48 Ga0207676_10206965 3300026095 Bacteria 1738
49 Ga0209984_1006473 3300027424 Unclassified 1437
50 Ga0210000_1008484 3300027462 Unclassified 1507
51 Ga0209971_1002378 3300027682 Bacteria 4543
52 Ga0209971_1025127 3300027682 Unclassified 1423
53 Ga0209974_10002283 3300027876 Bacteria 6960
54 Ga0207428_10067862 3300027907 Bacteria 2807
55 Ga0265338_10018558 3300028800 Bacteria 7441
56 Ga0265330_10034217 3300031235 Bacteria 2270
57 Ga0265332_10000034 3300031238 Bacteria 140429
58 Ga0265320_10003952 3300031240 Bacteria 9782
59 Ga0265329_10008964 3300031242 Unclassified 3762
60 Ga0265340_10044682 3300031247 Bacteria 2167
61 Ga0265339_10038533 3300031249 Unclassified 2666
62 Ga0265331_10000052 3300031250 Bacteria 180662
63 Ga0265331_10115466 3300031250 Unclassified 1229
64 Ga0265327_10036123 3300031251 Bacteria 2720
65 Ga0265316_10000027 3300031344 Bacteria 164765
66 Ga0316579_10031861 3300031691 Bacteria 2416
67 Ga0265314_10000118 3300031711 Bacteria 122891
68 Ga0265314_10184389 3300031711 Bacteria 1247
69 Ga0373956_0002075 3300035119 Bacteria 8308
70 Ga0373933_0007532 3300035724 Bacteria 5947
71 Ga0451577_0008335 3300042876 Bacteria 10084
72 Ga0451577_0018501 3300042876 Bacteria 6417
73 Ga0451577_0035116 3300042876 Unclassified 4517
74 Ga0451577_0146843 3300042876 Bacteria 2121
75 Ga0466969_0025445 3300044656 Bacteria 3042
76 Ga0453683_0003060 3300044673 Bacteria 12524
77 Ga0453683_0006332 3300044673 Bacteria 8130
78 Ga0453683_0006634 3300044673 Bacteria 7925
79 Ga0453683_0040321 3300044673 Bacteria 2932
80 Ga0466966_0001669 3300044684 Bacteria 14316
81 Ga0466963_0044523 3300044694 Bacteria 2922
82 Ga0453684_0000164 3300044712 Bacteria 296093
83 Ga0453684_0000843 3300044712 Bacteria 103482
84 Ga0453684_0003360 3300044712 Bacteria 36236
85 Ga0453684_0003732 3300044712 Bacteria 33729
86 Ga0453684_0006177 3300044712 Bacteria 23001
87 Ga0453684_0006496 3300044712 Bacteria 22177
88 Ga0453684_0007648 3300044712 Bacteria 19775
89 Ga0453684_0012744 3300044712 Bacteria 13807
90 Ga0453684_0016994 3300044712 Bacteria 11304
91 Ga0453684_0018467 3300044712 Bacteria 10702
92 Ga0453684_0020492 3300044712 Bacteria 9966
93 Ga0453684_0053660 3300044712 Bacteria 5259
94 Ga0453684_0057282 3300044712 Bacteria 5045
95 Ga0453684_0087088 3300044712 Bacteria 3872
96 Ga0453684_0096243 3300044712 Bacteria 3638
97 Ga0453684_0101446 3300044712 Bacteria 3521
98 Ga0453684_0194816 3300044712 Unclassified 2367
99 Ga0453684_0385334 3300044712 Bacteria 1573
100 Ga0453684_0514945 3300044712 Bacteria 1323
101 Ga0453684_0553780 3300044712 Bacteria 1266
102 Ga0453684_0632471 3300044712 Bacteria 1169
103 Ga0466971_0020634 3300044719 Bacteria 2930
104 Ga0466957_0056779 3300044842 Bacteria 2394
105 Ga0466959_0001611 3300045049 Bacteria 13905
106 Ga0451576_0000285 3300045051 Bacteria 123944
107 Ga0451576_0011942 3300045051 Bacteria 9814
108 Ga0451576_0016003 3300045051 Bacteria 8290
109 Ga0451576_0238147 3300045051 Unclassified 1901
110 Ga0451576_0259968 3300045051 Unclassified 1814
111 Ga0466958_0002847 3300045836 Bacteria 8807
112 Ga0501031_0086206 3300049568 Unclassified 2047
113 Ga0501036_0221344 3300049572 Bacteria 1589
114 Ga0501036_0287564 3300049572 Bacteria 1375
115 Ga0501037_0005639 3300049573 Bacteria 9125
116 Ga0501040_0180449 3300049576 Bacteria 1496
117 Ga0501042_0169864 3300049578 Unclassified 1573
118 Ga0501068_0089012 3300049584 Bacteria 1902
119 Ga0501070_0070141 3300049586 Unclassified 2902
120 Ga0501073_0157067 3300049589 Bacteria 1576
121 Ga0501073_0204911 3300049589 Bacteria 1363
122 Ga0501074_0141996 3300049590 Unclassified 1717
123 Ga0501075_0139286 3300049591 Unclassified 1848
124 Ga0501076_0082500 3300049592 Unclassified 2580
125 Ga0501257_000820 3300049686 Bacteria 6219
126 Ga0501080_0198860 3300049742 Bacteria 1840
127 Ga0501080_0332745 3300049742 Bacteria 1373
128 Ga0501035_0103287 3300049822 Bacteria 2500
129 Ga0501044_0014162 3300049823 Bacteria 8611
130 nmdc:mga05p37_10025_c1 3300050507 Bacteria 11248
131 nmdc:mga05p37_244480_c1 3300050507 Bacteria 2155
132 nmdc:mga05p37_2720_c1 3300050507 Bacteria 20539
133 nmdc:mga05p37_35446_c1 3300050507 Bacteria 6118
134 nmdc:mga05p37_425548_c1 3300050507 Bacteria 1544
135 nmdc:mga09592_2653_c1 3300050508 Bacteria 14468
136 nmdc:mga09592_60006_c1 3300050508 Unclassified 3215
137 nmdc:mga08y16_113818_c1 3300050511 Bacteria 2817
138 nmdc:mga08y16_157517_c1 3300050511 Unclassified 2360
139 nmdc:mga0n895_189372_c1 3300050512 Unclassified 2088
140 nmdc:mga0n895_87664_c1 3300050512 Unclassified 3110
141 Ga0501084_0386484 3300054114 Bacteria 1182
142 Ga0501082_0126579 3300060353 Bacteria 2215
143 Ga0466962_0012440 3300061719 Bacteria 4090

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049572 Ga0501036_0221344 Ga0501036_0221344_685_1473 259
2 3300042876 Ga0451577_0008335 Ga0451577_0008335_44_970 267
3 3300027876 Ga0209974_10002283 Ga0209974_100022834 271
4 3300050511 nmdc:mga08y16_157517_c1 nmdc:mga08y16_157517_c1_494_1366 283
5 3300031235 Ga0265330_10034217 Ga0265330_100342172 289
6 3300031238 Ga0265332_10000034 Ga0265332_1000003495 289
7 3300031240 Ga0265320_10003952 Ga0265320_100039523 289
8 3300031247 Ga0265340_10044682 Ga0265340_100446821 289
9 3300031249 Ga0265339_10038533 Ga0265339_100385332 289
10 3300031250 Ga0265331_10000052 Ga0265331_1000005294 289
11 3300031344 Ga0265316_10000027 Ga0265316_1000002748 289
12 3300031711 Ga0265314_10000118 Ga0265314_1000011870 289
13 3300042876 Ga0451577_0146843 Ga0451577_0146843_516_1520 289
14 3300044673 Ga0453683_0003060 Ga0453683_0003060_2623_3591 289
15 3300044712 Ga0453684_0000164 Ga0453684_0000164_255017_256021 289
16 3300044656 Ga0466969_0025445 Ga0466969_0025445_494_1459 290
17 3300044684 Ga0466966_0001669 Ga0466966_0001669_2880_3833 290
18 3300044694 Ga0466963_0044523 Ga0466963_0044523_795_1748 290
19 3300044712 Ga0453684_0012744 Ga0453684_0012744_5671_6666 290
20 3300044712 Ga0453684_0020492 Ga0453684_0020492_4867_5862 290
21 3300044719 Ga0466971_0020634 Ga0466971_0020634_1186_2139 290
22 3300044842 Ga0466957_0056779 Ga0466957_0056779_171_1124 290
23 3300045049 Ga0466959_0001611 Ga0466959_0001611_3460_4413 290
24 3300045836 Ga0466958_0002847 Ga0466958_0002847_6390_7343 290
25 3300061719 Ga0466962_0012440 Ga0466962_0012440_1982_2935 290
26 3300031242 Ga0265329_10008964 Ga0265329_100089642 291
27 3300031711 Ga0265314_10184389 Ga0265314_101843892 291
28 3300035119 Ga0373956_0002075 Ga0373956_0002075_1943_2836 292
29 3300035724 Ga0373933_0007532 Ga0373933_0007532_2825_3718 292
30 3300044712 Ga0453684_0000843 Ga0453684_0000843_67400_68374 292
31 3300005530 Ga0070679_100208854 Ga0070679_1002088542 293
32 3300022467 Ga0224712_10034088 Ga0224712_100340881 293
33 3300025921 Ga0207652_10038034 Ga0207652_100380344 293
34 3300028800 Ga0265338_10018558 Ga0265338_100185584 293
35 3300005436 Ga0070713_100103759 Ga0070713_1001037592 294
36 3300005445 Ga0070708_100033430 Ga0070708_1000334302 294
37 3300005445 Ga0070708_100041258 Ga0070708_1000412581 294
38 3300005467 Ga0070706_100005034 Ga0070706_10000503412 294
39 3300005468 Ga0070707_100006990 Ga0070707_1000069909 294
40 3300005468 Ga0070707_100039807 Ga0070707_1000398071 294
41 3300005471 Ga0070698_100010972 Ga0070698_1000109729 294
42 3300005518 Ga0070699_100012306 Ga0070699_1000123065 294
43 3300005536 Ga0070697_100030875 Ga0070697_1000308752 294
44 3300006028 Ga0070717_10018140 Ga0070717_100181402 294
45 3300006028 Ga0070717_10058799 Ga0070717_100587992 294
46 3300006175 Ga0070712_100388216 Ga0070712_1003882161 294
47 3300006871 Ga0075434_100194220 Ga0075434_1001942202 294
48 3300025910 Ga0207684_10018247 Ga0207684_100182475 294
49 3300025910 Ga0207684_10167041 Ga0207684_101670412 294
50 3300025915 Ga0207693_10280879 Ga0207693_102808792 294
51 3300025922 Ga0207646_10008042 Ga0207646_1000804210 294
52 3300025928 Ga0207700_10063174 Ga0207700_100631742 294
53 3300050512 nmdc:mga0n895_189372_c1 nmdc:mga0n895_189372_c1_485_1384 294
54 3300025922 Ga0207646_10540846 Ga0207646_105408461 295
55 3300005471 Ga0070698_100103244 Ga0070698_1001032442 296
56 3300006844 Ga0075428_100176123 Ga0075428_1001761232 296
57 3300006852 Ga0075433_10209098 Ga0075433_102090982 296
58 3300009147 Ga0114129_10046193 Ga0114129_100461934 296
59 3300009147 Ga0114129_10102511 Ga0114129_101025112 296
60 3300009147 Ga0114129_10476746 Ga0114129_104767462 296
61 3300009176 Ga0105242_10073984 Ga0105242_100739843 296
62 3300013297 Ga0157378_10012448 Ga0157378_100124485 296
63 3300013306 Ga0163162_10012809 Ga0163162_100128094 296
64 3300025961 Ga0207712_10299667 Ga0207712_102996671 296
65 3300027424 Ga0209984_1006473 Ga0209984_10064732 296
66 3300027462 Ga0210000_1008484 Ga0210000_10084842 296
67 3300027682 Ga0209971_1002378 Ga0209971_10023784 296
68 3300027682 Ga0209971_1025127 Ga0209971_10251272 296
69 3300027907 Ga0207428_10067862 Ga0207428_100678624 296
70 3300031691 Ga0316579_10031861 Ga0316579_100318613 296
71 3300049568 Ga0501031_0086206 Ga0501031_0086206_338_1273 296
72 3300049572 Ga0501036_0287564 Ga0501036_0287564_171_1106 296
73 3300049576 Ga0501040_0180449 Ga0501040_0180449_260_1195 296
74 3300049578 Ga0501042_0169864 Ga0501042_0169864_368_1303 296
75 3300049584 Ga0501068_0089012 Ga0501068_0089012_122_1057 296
76 3300049586 Ga0501070_0070141 Ga0501070_0070141_1200_2135 296
77 3300049589 Ga0501073_0204911 Ga0501073_0204911_45_980 296
78 3300049590 Ga0501074_0141996 Ga0501074_0141996_178_1113 296
79 3300049591 Ga0501075_0139286 Ga0501075_0139286_136_1071 296
80 3300049592 Ga0501076_0082500 Ga0501076_0082500_257_1192 296
81 3300049742 Ga0501080_0198860 Ga0501080_0198860_825_1760 296
82 3300049822 Ga0501035_0103287 Ga0501035_0103287_81_1016 296
83 3300050507 nmdc:mga05p37_10025_c1 nmdc:mga05p37_10025_c1_9022_9957 296
84 3300050507 nmdc:mga05p37_35446_c1 nmdc:mga05p37_35446_c1_375_1310 296
85 3300050507 nmdc:mga05p37_425548_c1 nmdc:mga05p37_425548_c1_475_1407 296
86 3300050511 nmdc:mga08y16_113818_c1 nmdc:mga08y16_113818_c1_245_1177 296
87 3300050512 nmdc:mga0n895_87664_c1 nmdc:mga0n895_87664_c1_2144_3076 296
88 3300054114 Ga0501084_0386484 Ga0501084_0386484_183_1118 296
89 3300060353 Ga0501082_0126579 Ga0501082_0126579_852_1787 296
90 3300005546 Ga0070696_100160698 Ga0070696_1001606982 297
91 3300005549 Ga0070704_100068021 Ga0070704_1000680212 297
92 3300005844 Ga0068862_100334531 Ga0068862_1003345312 297
93 3300031251 Ga0265327_10036123 Ga0265327_100361232 298
94 3300044712 Ga0453684_0007648 Ga0453684_0007648_14990_15898 298
95 3300049573 Ga0501037_0005639 Ga0501037_0005639_5267_6184 300
96 3300049686 Ga0501257_000820 Ga0501257_000820_3602_4519 300
97 3300049742 Ga0501080_0332745 Ga0501080_0332745_249_1166 300
98 3300049823 Ga0501044_0014162 Ga0501044_0014162_7528_8445 300
99 3300042876 Ga0451577_0035116 Ga0451577_0035116_2077_3015 310
100 3300044712 Ga0453684_0003732 Ga0453684_0003732_17915_18853 310
101 3300044712 Ga0453684_0006496 Ga0453684_0006496_4099_5040 310
102 3300044712 Ga0453684_0096243 Ga0453684_0096243_428_1381 312
103 3300044712 Ga0453684_0101446 Ga0453684_0101446_2438_3400 312
104 3300045051 Ga0451576_0016003 Ga0451576_0016003_3343_4317 312
105 3300049589 Ga0501073_0157067 Ga0501073_0157067_305_1258 312
106 3300050508 nmdc:mga09592_60006_c1 nmdc:mga09592_60006_c1_1718_2737 312
107 3300044712 Ga0453684_0016994 Ga0453684_0016994_2700_3719 313
108 3300044712 Ga0453684_0385334 Ga0453684_0385334_173_1141 313
109 3300044712 Ga0453684_0003360 Ga0453684_0003360_6372_7343 314
110 3300044712 Ga0453684_0006177 Ga0453684_0006177_17661_18632 314
111 3300044712 Ga0453684_0632471 Ga0453684_0632471_73_1044 314
112 3300005577 Ga0068857_100088993 Ga0068857_1000889933 315
113 3300005618 Ga0068864_100209873 Ga0068864_1002098732 315
114 3300006880 Ga0075429_100074336 Ga0075429_1000743364 315
115 3300009094 Ga0111539_10023772 Ga0111539_100237727 315
116 3300026095 Ga0207676_10206965 Ga0207676_102069652 315
117 3300044673 Ga0453683_0006332 Ga0453683_0006332_7033_7998 317
118 3300044673 Ga0453683_0006634 Ga0453683_0006634_3537_4502 317
119 3300044673 Ga0453683_0040321 Ga0453683_0040321_711_1679 317
120 3300045051 Ga0451576_0000285 Ga0451576_0000285_66612_67577 317
121 3300045051 Ga0451576_0238147 Ga0451576_0238147_28_1113 317
122 3300042876 Ga0451577_0018501 Ga0451577_0018501_5112_6083 318
123 3300044712 Ga0453684_0053660 Ga0453684_0053660_818_1810 318
124 3300044712 Ga0453684_0194816 Ga0453684_0194816_1003_1974 318
125 3300045051 Ga0451576_0259968 Ga0451576_0259968_105_1076 318
126 3300044712 Ga0453684_0018467 Ga0453684_0018467_5138_6118 319
127 3300044712 Ga0453684_0057282 Ga0453684_0057282_2897_3928 320
128 3300050507 nmdc:mga05p37_244480_c1 nmdc:mga05p37_244480_c1_845_1864 320
129 3300006880 Ga0075429_100002728 Ga0075429_10000272816 323
130 3300009147 Ga0114129_10050677 Ga0114129_100506773 323
131 3300031250 Ga0265331_10115466 Ga0265331_101154661 323
132 3300050507 nmdc:mga05p37_2720_c1 nmdc:mga05p37_2720_c1_15927_16931 323
133 3300050508 nmdc:mga09592_2653_c1 nmdc:mga09592_2653_c1_7452_8456 323
134 3300005617 Ga0068859_100024693 Ga0068859_1000246932 324
135 3300006931 Ga0097620_100024695 Ga0097620_1000246959 324
136 3300044712 Ga0453684_0553780 Ga0453684_0553780_211_1197 325
137 3300044712 Ga0453684_0087088 Ga0453684_0087088_2066_3154 327
138 3300005441 Ga0070700_100025089 Ga0070700_1000250893 333
139 3300005844 Ga0068862_100016760 Ga0068862_1000167609 333
140 3300026075 Ga0207708_10041275 Ga0207708_100412753 333
141 3300044712 Ga0453684_0514945 Ga0453684_0514945_253_1254 333
142 3300045051 Ga0451576_0011942 Ga0451576_0011942_7253_8254 333
143 3300005295 Ga0065707_10001874 Ga0065707_100018745 338

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12706

Lactamase_B_2

Beta-lactamase superfamily domain

69

296

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
6kns-assembly3.cif.gz_C-2 crystal structure of the metallo-beta-lactamase fold protein yhfi from bacillus subtilis (space group i4122) 0.8294 2 311
6kns-assembly2.cif.gz_B-2 crystal structure of the metallo-beta-lactamase fold protein yhfi from bacillus subtilis (space group i4122) 0.8293 3 311
6kns-assembly3.cif.gz_C-2 crystal structure of the metallo-beta-lactamase fold protein yhfi from bacillus subtilis (space group i4122) 0.8263 2 311
6kns-assembly2.cif.gz_B-2 crystal structure of the metallo-beta-lactamase fold protein yhfi from bacillus subtilis (space group i4122) 0.8261 3 311
6kns-assembly4.cif.gz_D-2 crystal structure of the metallo-beta-lactamase fold protein yhfi from bacillus subtilis (space group i4122) 0.8012 5 309
ID Description Score Start End Superfamily
af_P9WGC1_17_267_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7861 5 309 3.60.15.10
af_P9WGC1_17_267_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7804 5 309 3.60.15.10
1zkpC00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7564 4 313 3.60.15.10
1zkpC00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7506 4 313 3.60.15.10
af_P9WGZ5_2_273_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7427 5 312 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A350WRD5-F1-model_v4 MBL fold metallo-hydrolase 0.9848 38 313 GO:0042781
AF-A0A3B9Y0W8-F1-model_v4 Uncharacterized protein 0.9711 215 314
AF-A0A7V4LEJ7-F1-model_v4 MBL fold metallo-hydrolase 0.9687 6 309 GO:0042781
AF-A0A101WD50-F1-model_v4 MBL fold metallo-hydrolase 0.9633 6 311 GO:0016787
AF-A0A382ZED1-F1-model_v4 Metallo-beta-lactamase domain-containing protein 0.9617 186 311

Feature Viewer

pLDDT pTM Quality
85.99 0.86 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map