F178835

General Info

Members Datasets Scaffolds Average Seq Length
140 89 280 279

Family's Representative Sequence

Representative Sequence 3300005468|Ga0070707_100049694|Ga0070707_1000496943
Length 311
Sequence MERARWQDVGIDTPVKRAPKMSAVPARTQKETPRVAFVLGGGGHLGASEVGMLKALLENDVRPELVVGTSVGALNGAAIAADPSLSTVTRLREIWLGLDEDRIFGGSIFAGAANLVRSRTHLHSNQPLRTLLEKLLPAERFEDLRIPFHCVAASIEKAAEHWFYQGPLVEAILASAAVPGVLPAVEIDGEHFLDGGIVNSIPISRAVELGATEIYVLHVGRIEQPLVPPRTPVQVAMVAFEIARRHRFARDLATLPAGVVAHVLPTGEPKRETKAQLSELNYRDFKAVARRIDRAHRASATYLSGAVPAPG

Samples

Sample ID Description Type Environment
1 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
57 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
58 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
62 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
63 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
64 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
65 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
66 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
67 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
68 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
69 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
70 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
71 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
72 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
73 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
74 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
75 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
76 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
77 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
78 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
79 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
80 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
81 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
82 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
83 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
84 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
85 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
86 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
87 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
88 2808606372 Agromyces sp. 23-23 Isolate Unclassified
89 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.57
Metatranscriptomes 0
Isolates 1.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.14
Rhizosphere 82.14
Stem 0
Stem Tuber 0
Unclassified 4.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070707_100049694 3300005468 Bacteria 4020
2 Ga0070658_10196904 3300005327 Bacteria 1699
3 Ga0068869_100016748 3300005334 Bacteria 4948
4 Ga0068868_100012091 3300005338 Bacteria 6303
5 Ga0070692_10026672 3300005345 Bacteria 2858
6 Ga0070675_100051311 3300005354 Bacteria 3390
7 Ga0070673_100314368 3300005364 Bacteria 1382
8 Ga0070659_100035173 3300005366 Bacteria 3900
9 Ga0070714_100009869 3300005435 Bacteria 7526
10 Ga0070714_100197512 3300005435 Bacteria 1839
11 Ga0070713_100174701 3300005436 Bacteria 1927
12 Ga0070700_100063982 3300005441 Bacteria 2328
13 Ga0070708_100019390 3300005445 Bacteria 5715
14 Ga0070708_100114481 3300005445 Bacteria 2481
15 Ga0070708_100349866 3300005445 Unclassified 1393
16 Ga0070706_100000819 3300005467 Bacteria 34477
17 Ga0070706_100189837 3300005467 Bacteria 1920
18 Ga0070707_100094410 3300005468 Unclassified 2896
19 Ga0070698_100458183 3300005471 Bacteria 1211
20 Ga0070699_100214355 3300005518 Unclassified 1715
21 Ga0070684_100083007 3300005535 Bacteria 2838
22 Ga0070672_100069062 3300005543 Bacteria 2804
23 Ga0070693_100264161 3300005547 Bacteria 1146
24 Ga0070665_100089541 3300005548 Bacteria 3083
25 Ga0070664_100003091 3300005564 Bacteria 13457
26 Ga0068857_100025398 3300005577 Bacteria 5217
27 Ga0068854_100360092 3300005578 Bacteria 1193
28 Ga0068861_100118777 3300005719 Bacteria 2130
29 Ga0068858_100062500 3300005842 Bacteria 3443
30 Ga0068862_100006725 3300005844 Bacteria 9536
31 Ga0081455_10008176 3300005937 Bacteria 10911
32 Ga0070717_10078214 3300006028 Bacteria 2771
33 Ga0070717_10127593 3300006028 Bacteria 2185
34 Ga0070717_10141798 3300006028 Bacteria 2073
35 Ga0068865_100457656 3300006881 Bacteria 1056
36 Ga0075436_100150865 3300006914 Bacteria 1636
37 Ga0075435_100014097 3300007076 Bacteria 5964
38 Ga0111539_10001680 3300009094 Bacteria 29493
39 Ga0105245_10012861 3300009098 Bacteria 7293
40 Ga0114129_10807178 3300009147 Unclassified 1196
41 Ga0157370_10005695 3300013104 Bacteria 13928
42 Ga0213876_10051245 3300021384 Bacteria 2181
43 Ga0213876_10055262 3300021384 Bacteria 2096
44 Ga0213876_10065310 3300021384 Bacteria 1920
45 Ga0213876_10077732 3300021384 Bacteria 1753
46 Ga0213875_10007046 3300021388 Bacteria 5845
47 Ga0213875_10024418 3300021388 Bacteria 2882
48 Ga0213875_10091501 3300021388 Bacteria 1419
49 Ga0207684_10010115 3300025910 Bacteria 8309
50 Ga0207684_10130220 3300025910 Bacteria 2159
51 Ga0207646_10043956 3300025922 Bacteria 4010
52 Ga0207646_10384797 3300025922 Bacteria 1267
53 Ga0207659_10122200 3300025926 Bacteria 1997
54 Ga0207690_10052922 3300025932 Bacteria 2721
55 Ga0207706_10018818 3300025933 Bacteria 6212
56 Ga0207704_10392602 3300025938 Bacteria 1093
57 Ga0207691_10107562 3300025940 Bacteria 2483
58 Ga0207689_10012488 3300025942 Bacteria 7256
59 Ga0207661_10153209 3300025944 Bacteria 1994
60 Ga0207679_10005522 3300025945 Bacteria 7924
61 Ga0207677_10125148 3300026023 Bacteria 1941
62 Ga0207703_10248239 3300026035 Bacteria 1603
63 Ga0207708_10052291 3300026075 Bacteria 3111
64 Ga0207674_10031808 3300026116 Bacteria 5539
65 Ga0207675_100050594 3300026118 Bacteria 3877
66 Ga0207428_10002930 3300027907 Bacteria 16911
67 Ga0268266_10256587 3300028379 Bacteria 1619
68 Ga0268265_10016975 3300028380 Bacteria 5012
69 Ga0268264_10042327 3300028381 Bacteria 3770
70 Ga0265336_10006114 3300028666 Bacteria 4366
71 Ga0265338_10027696 3300028800 Bacteria 5678
72 Ga0307413_10117805 3300031824 Bacteria 1792
73 Ga0307409_100012094 3300031995 Bacteria 5482
74 Ga0307409_100307256 3300031995 Bacteria 1478
75 Ga0307416_100229024 3300032002 Bacteria 1790
76 Ga0307414_10124339 3300032004 Bacteria 1990
77 Ga0307415_100093287 3300032126 Bacteria 2186
78 Ga0436364_0504722 3300037853 Bacteria 8555
79 Ga0436364_0913183 3300037853 Bacteria 1774
80 Ga0436364_1048038 3300037853 Bacteria 14083
81 Ga0436364_1113674 3300037853 Bacteria 3693
82 Ga0436365_0755833 3300039437 Bacteria 31083
83 Ga0436365_1069536 3300039437 Bacteria 6394
84 Ga0436365_1072837 3300039437 Bacteria 29183
85 Ga0436365_1372787 3300039437 Bacteria 4167
86 Ga0436365_1853236 3300039437 Bacteria 2547
87 Ga0436361_0678653 3300039447 Unclassified 1704
88 Ga0436363_0136335 3300039450 Bacteria 3115
89 Ga0436363_0185207 3300039450 Bacteria 2703
90 Ga0436363_0678019 3300039450 Bacteria 8435
91 Ga0436362_0125530 3300039453 Bacteria 961
92 Ga0466969_0113390 3300044656 Bacteria 1267
93 Ga0466965_0151710 3300044683 Bacteria 1211
94 Ga0466966_0136790 3300044684 Bacteria 1498
95 Ga0466966_0164565 3300044684 Bacteria 1350
96 Ga0466966_0168786 3300044684 Bacteria 1330
97 Ga0466966_0236549 3300044684 Bacteria 1101
98 Ga0466961_0014129 3300044693 Bacteria 5122
99 Ga0466961_0025738 3300044693 Bacteria 3782
100 Ga0466961_0063331 3300044693 Bacteria 2350
101 Ga0466963_0019539 3300044694 Bacteria 4251
102 Ga0466963_0100031 3300044694 Bacteria 1984
103 Ga0466963_0288885 3300044694 Bacteria 1153
104 Ga0466971_0041532 3300044719 Bacteria 2066
105 Ga0466968_0137751 3300044735 Bacteria 1114
106 Ga0466970_0196203 3300044765 Bacteria 1123
107 Ga0466959_0009970 3300045049 Bacteria 6770
108 Ga0466959_0034783 3300045049 Bacteria 3727
109 Ga0466959_0051755 3300045049 Bacteria 3010
110 Ga0466959_0108762 3300045049 Bacteria 1980
111 Ga0466959_0134551 3300045049 Bacteria 1751
112 Ga0466959_0174621 3300045049 Bacteria 1506
113 Ga0466959_0192921 3300045049 Bacteria 1421
114 Ga0466959_0197951 3300045049 Bacteria 1400
115 Ga0466958_0005978 3300045836 Bacteria 6586
116 Ga0466958_0013788 3300045836 Bacteria 4608
117 Ga0466958_0019751 3300045836 Bacteria 3923
118 Ga0466958_0037676 3300045836 Bacteria 2898
119 Ga0466958_0048029 3300045836 Bacteria 2578
120 Ga0466958_0048412 3300045836 Bacteria 2569
121 Ga0466958_0125414 3300045836 Bacteria 1610
122 Ga0466958_0162836 3300045836 Bacteria 1410
123 Ga0466967_0007574 3300045976 Bacteria 7848
124 Ga0466967_0020513 3300045976 Bacteria 5345
125 Ga0466967_0040053 3300045976 Bacteria 4032
126 Ga0466967_0051247 3300045976 Bacteria 3616
127 Ga0466967_0068949 3300045976 Bacteria 3159
128 Ga0466967_0144415 3300045976 Bacteria 2219
129 Ga0466967_0690149 3300045976 Bacteria 1011
130 Ga0496108_0125058 3300048911 Bacteria 2207
131 Ga0496109_0095179 3300048912 Bacteria 2757
132 Ga0496114_0073463 3300048917 Bacteria 2878
133 Ga0496119_0000792 3300048922 Bacteria 42312
134 Ga0501040_0115013 3300049576 Unclassified 1884
135 nmdc:mga08y16_15808_c1 3300050511 Bacteria 7935
136 nmdc:mga0rr50_9954_c1 3300050513 Bacteria 6010
137 nmdc:mga08x19_189382_c1 3300050514 Bacteria 1407
138 Ga0466962_0085375 3300061719 Bacteria 1511
139 2808902368 2808606372 Bacteria 4649509
140 3001890166 3001889506 Bacteria 2975194
141 Ga0070707_100049694
142 Ga0070658_10196904
143 Ga0068869_100016748
144 Ga0068868_100012091
145 Ga0070692_10026672
146 Ga0070675_100051311
147 Ga0070673_100314368
148 Ga0070659_100035173
149 Ga0070714_100009869
150 Ga0070714_100197512
151 Ga0070713_100174701
152 Ga0070700_100063982
153 Ga0070708_100019390
154 Ga0070708_100114481
155 Ga0070708_100349866
156 Ga0070706_100000819
157 Ga0070706_100189837
158 Ga0070707_100094410
159 Ga0070698_100458183
160 Ga0070699_100214355
161 Ga0070684_100083007
162 Ga0070672_100069062
163 Ga0070693_100264161
164 Ga0070665_100089541
165 Ga0070664_100003091
166 Ga0068857_100025398
167 Ga0068854_100360092
168 Ga0068861_100118777
169 Ga0068858_100062500
170 Ga0068862_100006725
171 Ga0081455_10008176
172 Ga0070717_10078214
173 Ga0070717_10127593
174 Ga0070717_10141798
175 Ga0068865_100457656
176 Ga0075436_100150865
177 Ga0075435_100014097
178 Ga0111539_10001680
179 Ga0105245_10012861
180 Ga0114129_10807178
181 Ga0157370_10005695
182 Ga0213876_10051245
183 Ga0213876_10055262
184 Ga0213876_10065310
185 Ga0213876_10077732
186 Ga0213875_10007046
187 Ga0213875_10024418
188 Ga0213875_10091501
189 Ga0207684_10010115
190 Ga0207684_10130220
191 Ga0207646_10043956
192 Ga0207646_10384797
193 Ga0207659_10122200
194 Ga0207690_10052922
195 Ga0207706_10018818
196 Ga0207704_10392602
197 Ga0207691_10107562
198 Ga0207689_10012488
199 Ga0207661_10153209
200 Ga0207679_10005522
201 Ga0207677_10125148
202 Ga0207703_10248239
203 Ga0207708_10052291
204 Ga0207674_10031808
205 Ga0207675_100050594
206 Ga0207428_10002930
207 Ga0268266_10256587
208 Ga0268265_10016975
209 Ga0268264_10042327
210 Ga0265336_10006114
211 Ga0265338_10027696
212 Ga0307413_10117805
213 Ga0307409_100012094
214 Ga0307409_100307256
215 Ga0307416_100229024
216 Ga0307414_10124339
217 Ga0307415_100093287
218 Ga0436364_0504722
219 Ga0436364_0913183
220 Ga0436364_1048038
221 Ga0436364_1113674
222 Ga0436365_0755833
223 Ga0436365_1069536
224 Ga0436365_1072837
225 Ga0436365_1372787
226 Ga0436365_1853236
227 Ga0436361_0678653
228 Ga0436363_0136335
229 Ga0436363_0185207
230 Ga0436363_0678019
231 Ga0436362_0125530
232 Ga0466969_0113390
233 Ga0466965_0151710
234 Ga0466966_0136790
235 Ga0466966_0164565
236 Ga0466966_0168786
237 Ga0466966_0236549
238 Ga0466961_0014129
239 Ga0466961_0025738
240 Ga0466961_0063331
241 Ga0466963_0019539
242 Ga0466963_0100031
243 Ga0466963_0288885
244 Ga0466971_0041532
245 Ga0466968_0137751
246 Ga0466970_0196203
247 Ga0466959_0009970
248 Ga0466959_0034783
249 Ga0466959_0051755
250 Ga0466959_0108762
251 Ga0466959_0134551
252 Ga0466959_0174621
253 Ga0466959_0192921
254 Ga0466959_0197951
255 Ga0466958_0005978
256 Ga0466958_0013788
257 Ga0466958_0019751
258 Ga0466958_0037676
259 Ga0466958_0048029
260 Ga0466958_0048412
261 Ga0466958_0125414
262 Ga0466958_0162836
263 Ga0466967_0007574
264 Ga0466967_0020513
265 Ga0466967_0040053
266 Ga0466967_0051247
267 Ga0466967_0068949
268 Ga0466967_0144415
269 Ga0466967_0690149
270 Ga0496108_0125058
271 Ga0496109_0095179
272 Ga0496114_0073463
273 Ga0496119_0000792
274 Ga0501040_0115013
275 nmdc:mga08y16_15808_c1
276 nmdc:mga0rr50_9954_c1
277 nmdc:mga08x19_189382_c1
278 Ga0466962_0085375
279 2808902368
280 3001890166

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01734

Patatin

Patatin-like phospholipase

37

207

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5fya-assembly1.cif.gz_A cubic crystal of the native plpd 0.7689 8 277
5fya-assembly1.cif.gz_A cubic crystal of the native plpd 0.7635 8 277
5fqu-assembly1.cif.gz_B orthorhombic crystal structure of of plpd (selenomethionine derivative) 0.7582 6 277
5fqu-assembly1.cif.gz_A orthorhombic crystal structure of of plpd (selenomethionine derivative) 0.7569 6 277
5fqu-assembly1.cif.gz_B orthorhombic crystal structure of of plpd (selenomethionine derivative) 0.7555 6 277
ID Description Score Start End Superfamily
af_A0A0P0XFP9_51_260_3.40.1090.10 Alpha Beta;3-Layer(aba) Sandwich;Cytosolic phospholipase A2 catalytic domain;Cytosolic phospholipase A2 catalytic domain 0.8278 8 177 3.40.1090.10
af_Q54JJ8_18_280_3.40.1090.10 Alpha Beta;3-Layer(aba) Sandwich;Cytosolic phospholipase A2 catalytic domain;Cytosolic phospholipase A2 catalytic domain 0.817 8 243 3.40.1090.10
af_Q4CYT0_175_370_3.40.1090.10 Alpha Beta;3-Layer(aba) Sandwich;Cytosolic phospholipase A2 catalytic domain;Cytosolic phospholipase A2 catalytic domain 0.8083 15 169 3.40.1090.10
af_A0A0P0XPE4_1_342_3.40.1090.10 Alpha Beta;3-Layer(aba) Sandwich;Cytosolic phospholipase A2 catalytic domain;Cytosolic phospholipase A2 catalytic domain 0.7829 38 183 3.40.1090.10
af_K7LIJ4_222_448_3.40.1090.10 Alpha Beta;3-Layer(aba) Sandwich;Cytosolic phospholipase A2 catalytic domain;Cytosolic phospholipase A2 catalytic domain 0.7819 8 190 3.40.1090.10
ID Description Score Start End GO Terms
AF-A0A5S4F8Y9-F1-model_v4 Patatin-like phospholipase family protein 0.9467 6 276 GO:0016042
GO:0016787
AF-A0A542R5G1-F1-model_v4 deleted 0.9419 6 276
AF-A0A7K1CWD8-F1-model_v4 Patatin-like phospholipase family protein 0.9321 7 276 GO:0016042
GO:0016787
AF-A0A542R5G1-F1-model_v4 deleted 0.919 6 276
AF-A0A7V9GIK7-F1-model_v4 Patatin-like phospholipase family protein 0.9156 8 276 GO:0016042
GO:0016787

Map