F177121

General Info

Members Datasets Scaffolds Average Seq Length
139 82 138 244

Family's Representative Sequence

Representative Sequence 3300041498|Ga0451841_0964945|Ga0451841_0964945_96_899
Length 267
Sequence MNSTEAAELLGHCSSFDNRKPSLAAAVAWASALHDIPLDADAKAAVASYYTTAPKDPGAKLWIMPHHIRTLRAKLRSARLVNFQYEPIAGESVLESIARYRGQVQAIASGRVPAPVGRLALEGAPPKEFVRELAARGWEGNRTVPESDEDTLTAELVDTVRRVGPLGVECPACHAAMGRPCKTPGGTDKQPLGKPRPKPHNARLRAAQGIPEATRAEREAQEDRVRLRAAQHPTLQQLAEDDIPDAEIVDEAACANPTSPDTSGATS

Samples

Sample ID Description Type Environment
1 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
2 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
3 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
4 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
5 3300013875 Rhizosphere microbial communities from switchgrass unharvested rhizosphere in Austin, TX, USA - RS_233 Metagenome Rhizosphere
6 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
7 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
8 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
9 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
10 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
11 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
12 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
13 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
14 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
15 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
16 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
17 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
18 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
19 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
20 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
21 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
22 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
23 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
24 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
25 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
26 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
27 3300042132 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_070716_133 Metagenome Rhizosphere
28 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
29 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
30 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
31 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
32 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
33 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
34 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
35 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
36 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
37 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
38 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
39 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
40 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
41 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
42 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
43 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
44 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
45 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
46 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
47 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
48 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
49 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
50 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
51 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
52 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
53 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
54 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
55 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
56 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
57 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
58 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
59 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
60 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
61 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
62 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
63 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
64 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
65 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
66 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
67 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
68 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
69 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
70 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
71 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
72 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
73 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
74 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
77 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
78 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
79 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
80 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
81 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
82 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.28
Metatranscriptomes 0
Isolates 0.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.72
Nodule 1.44
Rhizoplane 3.6
Rhizosphere 91.37
Stem 0
Stem Tuber 0
Unclassified 2.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068856_100043177 3300005614 Bacteria 4436
2 Ga0099826_10055686 3300006948 Bacteria 2616
3 Ga0105035_102124 3300009988 Bacteria 1436
4 Ga0157515_131819 3300013875 Bacteria 1359
5 Ga0182008_10003407 3300014497 Bacteria 9605
6 Ga0182007_10000523 3300015262 Bacteria 22635
7 Ga0207702_10192225 3300026078 Bacteria 1887
8 Ga0209282_1097781 3300027666 Bacteria 1519
9 Ga0307513_10474952 3300031456 Bacteria 971
10 Ga0307516_10000129 3300031730 Bacteria 89873
11 Ga0395899_0045856 3300037312 Bacteria 3257
12 Ga0395900_0053388 3300037418 Bacteria 4159
13 Ga0395898_0281175 3300037466 Bacteria 1587
14 Ga0395898_0282475 3300037466 Bacteria 1583
15 Ga0395901_0334797 3300038443 Bacteria 1564
16 Ga0439436_0007242 3300041404 Bacteria 3411
17 Ga0439436_0023597 3300041404 Bacteria 1819
18 Ga0439438_027530 3300041405 Bacteria 1533
19 Ga0439439_0000553 3300041406 Bacteria 6514
20 Ga0439439_0042555 3300041406 Bacteria 1180
21 Ga0451841_0964945 3300041498 Unclassified 1249
22 Ga0451853_2059745 3300041512 Bacteria 4593
23 Ga0439449_0000058 3300042007 Bacteria 33557
24 Ga0439449_0091322 3300042007 Bacteria 1124
25 Ga0439457_000174 3300042014 Bacteria 16722
26 Ga0439457_002190 3300042014 Bacteria 5648
27 Ga0439457_002948 3300042014 Bacteria 4728
28 Ga0439457_004802 3300042014 Bacteria 3477
29 Ga0439457_032532 3300042014 Bacteria 1157
30 Ga0450911_000454 3300042115 Bacteria 13237
31 Ga0450911_004195 3300042115 Bacteria 2397
32 Ga0450911_008044 3300042115 Bacteria 1512
33 Ga0450919_009966 3300042121 Bacteria 1088
34 Ga0450920_000626 3300042122 Bacteria 5636
35 Ga0450920_017183 3300042122 Bacteria 1382
36 Ga0450894_000088 3300042131 Bacteria 15239
37 Ga0450894_000306 3300042131 Bacteria 8787
38 Ga0450894_000388 3300042131 Bacteria 7568
39 Ga0450894_000672 3300042131 Bacteria 5713
40 Ga0450894_003787 3300042131 Bacteria 1975
41 Ga0450895_000011 3300042132 Bacteria 10175
42 Ga0450895_000016 3300042132 Bacteria 6466
43 Ga0450895_000079 3300042132 Bacteria 3816
44 Ga0450896_000065 3300042133 Bacteria 6819
45 Ga0450896_001137 3300042133 Bacteria 3161
46 Ga0450898_000156 3300042134 Bacteria 6954
47 Ga0450898_000313 3300042134 Bacteria 5443
48 Ga0450899_001828 3300042135 Bacteria 2360
49 Ga0450899_005084 3300042135 Bacteria 1411
50 Ga0450903_008123 3300042138 Bacteria 1720
51 Ga0450906_000001 3300042145 Bacteria 81007
52 Ga0450906_000100 3300042145 Bacteria 14578
53 Ga0450906_000634 3300042145 Bacteria 7516
54 Ga0450906_001048 3300042145 Bacteria 6090
55 Ga0450906_009902 3300042145 Bacteria 1809
56 Ga0450906_014864 3300042145 Bacteria 1421
57 Ga0450906_030717 3300042145 Bacteria 949
58 Ga0450907_000379 3300042146 Bacteria 13629
59 Ga0450907_021096 3300042146 Bacteria 1095
60 Ga0450910_000866 3300042147 Bacteria 3657
61 Ga0450910_013453 3300042147 Bacteria 1191
62 Ga0450910_014093 3300042147 Bacteria 1168
63 Ga0439458_0000658 3300042157 Bacteria 8910
64 Ga0439458_0005526 3300042157 Bacteria 2841
65 Ga0439458_0028146 3300042157 Bacteria 1329
66 Ga0450908_000199 3300042184 Bacteria 12164
67 Ga0450908_000499 3300042184 Bacteria 7543
68 Ga0450908_000540 3300042184 Bacteria 7284
69 Ga0450908_004180 3300042184 Bacteria 2792
70 Ga0450909_000741 3300042185 Bacteria 4407
71 Ga0450901_006938 3300042533 Bacteria 1167
72 Ga0495603_0000125 3300046455 Bacteria 37553
73 Ga0495603_0001191 3300046455 Bacteria 15167
74 Ga0495603_0097562 3300046455 Bacteria 1716
75 Ga0495639_0047463 3300046475 Bacteria 1945
76 Ga0495662_0136477 3300046476 Bacteria 1206
77 Ga0495585_0018240 3300046492 Bacteria 4050
78 Ga0495585_0208012 3300046492 Bacteria 993
79 Ga0495594_0000040 3300046499 Bacteria 57293
80 Ga0495594_0001789 3300046499 Bacteria 11175
81 Ga0495583_0004475 3300046506 Bacteria 9988
82 Ga0495631_0070497 3300046518 Bacteria 1511
83 Ga0495648_0020884 3300046524 Bacteria 4554
84 Ga0495587_0009726 3300046536 Bacteria 6148
85 Ga0495587_0162535 3300046536 Bacteria 1270
86 Ga0495622_0001058 3300046557 Bacteria 14605
87 Ga0495622_0012426 3300046557 Bacteria 3942
88 Ga0495622_0013503 3300046557 Bacteria 3787
89 Ga0495633_0160583 3300046558 Bacteria 1037
90 Ga0495656_0000510 3300046615 Bacteria 12706
91 Ga0495634_0131131 3300046642 Bacteria 1598
92 Ga0495611_0002436 3300046648 Bacteria 8504
93 Ga0495625_0318515 3300046660 Bacteria 991
94 Ga0495588_0000556 3300046674 Bacteria 17920
95 Ga0495588_0000997 3300046674 Bacteria 12347
96 Ga0495588_0287245 3300046674 Bacteria 867
97 Ga0495657_0015155 3300046675 Bacteria 5646
98 Ga0495646_0010217 3300046680 Bacteria 5969
99 Ga0495613_0033907 3300046689 Bacteria 3792
100 Ga0495600_0000056 3300046809 Bacteria 68909
101 Ga0495581_0001021 3300047315 Bacteria 15140
102 Ga0495581_0014988 3300047315 Bacteria 4498
103 Ga0495581_0111749 3300047315 Bacteria 1589
104 Ga0495604_0001254 3300047317 Bacteria 20792
105 Ga0495636_0000274 3300047318 Bacteria 20203
106 Ga0495683_0016517 3300047323 Bacteria 3832
107 Ga0495687_022296 3300047443 Bacteria 3042
108 Ga0495687_077895 3300047443 Bacteria 1308
109 Ga0495687_084018 3300047443 Bacteria 1238
110 Ga0495687_090576 3300047443 Bacteria 1172
111 Ga0495675_0001089 3300047444 Bacteria 16476
112 Ga0495675_0001611 3300047444 Bacteria 13572
113 Ga0495677_0003646 3300047445 Bacteria 5962
114 Ga0495685_000985 3300047447 Bacteria 8647
115 Ga0495685_015800 3300047447 Bacteria 2578
116 Ga0495685_021113 3300047447 Bacteria 2240
117 Ga0495685_022445 3300047447 Bacteria 2172
118 Ga0495685_034635 3300047447 Bacteria 1735
119 Ga0495685_075248 3300047447 Bacteria 1128
120 Ga0495681_0035068 3300047470 Bacteria 2494
121 Ga0495686_0000343 3300047472 Bacteria 76639
122 Ga0495593_0042973 3300047673 Bacteria 2424
123 Ga0496105_0000618 3300048908 Bacteria 23823
124 Ga0496106_0160073 3300048909 Bacteria 1780
125 Ga0496106_0172847 3300048909 Bacteria 1713
126 Ga0496108_0073656 3300048911 Bacteria 2883
127 Ga0496109_0464720 3300048912 Bacteria 1195
128 Ga0501036_0001057 3300049572 Bacteria 20818
129 Ga0501039_0043858 3300049575 Bacteria 3455
130 Ga0501068_0000144 3300049584 Bacteria 32396
131 Ga0501069_0001700 3300049585 Bacteria 10959
132 Ga0501070_0003349 3300049586 Bacteria 13915
133 Ga0501070_0023542 3300049586 Bacteria 5159
134 Ga0501076_0000121 3300049592 Bacteria 43100
135 Ga0501035_0000207 3300049822 Bacteria 71478
136 Ga0501035_0094924 3300049822 Bacteria 2622
137 Ga0500578_0003322 3300053086 Bacteria 12185
138 Ga0501082_0014950 3300060353 Bacteria 6689

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047447 Ga0495685_075248 Ga0495685_075248_427_1074 193
2 3300037466 Ga0395898_0281175 Ga0395898_0281175_44_694 194
3 3300009988 Ga0105035_102124 Ga0105035_1021242 206
4 3300013875 Ga0157515_131819 Ga0157515_1318192 206
5 3300046674 Ga0495588_0287245 Ga0495588_0287245_86_832 206
6 3300047673 Ga0495593_0042973 Ga0495593_0042973_379_1125 207
7 3300042115 Ga0450911_000454 Ga0450911_000454_6664_7431 208
8 3300042121 Ga0450919_009966 Ga0450919_009966_253_1020 208
9 3300042122 Ga0450920_017183 Ga0450920_017183_323_1090 208
10 3300042131 Ga0450894_003787 Ga0450894_003787_948_1715 208
11 3300042145 Ga0450906_000001 Ga0450906_000001_9958_10725 208
12 3300049572 Ga0501036_0001057 Ga0501036_0001057_16149_16892 208
13 3300042147 Ga0450910_014093 Ga0450910_014093_384_1079 209
14 3300042014 Ga0439457_000174 Ga0439457_000174_7913_8671 212
15 3300048912 Ga0496109_0464720 Ga0496109_0464720_102_827 213
16 3300046476 Ga0495662_0136477 Ga0495662_0136477_153_872 220
17 3300046674 Ga0495588_0000997 Ga0495588_0000997_2893_3612 220
18 3300047318 Ga0495636_0000274 Ga0495636_0000274_10710_11429 220
19 3300048909 Ga0496106_0172847 Ga0496106_0172847_490_1209 220
20 3300048911 Ga0496108_0073656 Ga0496108_0073656_1816_2535 220
21 3300053086 Ga0500578_0003322 Ga0500578_0003322_5961_6707 223
22 3300041405 Ga0439438_027530 Ga0439438_027530_204_950 224
23 3300041406 Ga0439439_0000553 Ga0439439_0000553_1463_2209 224
24 3300041406 Ga0439439_0042555 Ga0439439_0042555_354_1100 224
25 3300042014 Ga0439457_002948 Ga0439457_002948_3748_4494 224
26 3300042115 Ga0450911_004195 Ga0450911_004195_466_1212 224
27 3300042115 Ga0450911_008044 Ga0450911_008044_213_959 224
28 3300042122 Ga0450920_000626 Ga0450920_000626_4145_4891 224
29 3300042131 Ga0450894_000088 Ga0450894_000088_1041_1787 224
30 3300042131 Ga0450894_000672 Ga0450894_000672_883_1629 224
31 3300042132 Ga0450895_000011 Ga0450895_000011_2402_3148 224
32 3300042132 Ga0450895_000016 Ga0450895_000016_1073_1819 224
33 3300042133 Ga0450896_001137 Ga0450896_001137_895_1641 224
34 3300042134 Ga0450898_000156 Ga0450898_000156_4659_5405 224
35 3300042134 Ga0450898_000313 Ga0450898_000313_3669_4415 224
36 3300042135 Ga0450899_005084 Ga0450899_005084_227_973 224
37 3300042145 Ga0450906_000100 Ga0450906_000100_3455_4201 224
38 3300042145 Ga0450906_001048 Ga0450906_001048_4304_5050 224
39 3300042145 Ga0450906_014864 Ga0450906_014864_507_1253 224
40 3300042146 Ga0450907_021096 Ga0450907_021096_264_1010 224
41 3300042147 Ga0450910_000866 Ga0450910_000866_2461_3207 224
42 3300042147 Ga0450910_013453 Ga0450910_013453_193_939 224
43 3300042184 Ga0450908_000199 Ga0450908_000199_10378_11124 224
44 3300042184 Ga0450908_000540 Ga0450908_000540_5353_6099 224
45 3300042185 Ga0450909_000741 Ga0450909_000741_3188_3934 224
46 3300041404 Ga0439436_0007242 Ga0439436_0007242_2586_3335 225
47 3300042014 Ga0439457_004802 Ga0439457_004802_2238_2987 225
48 3300042131 Ga0450894_000388 Ga0450894_000388_5107_5856 225
49 3300042133 Ga0450896_000065 Ga0450896_000065_1378_2127 225
50 3300042145 Ga0450906_009902 Ga0450906_009902_1020_1769 225
51 3300042184 Ga0450908_004180 Ga0450908_004180_1733_2482 225
52 3300046455 Ga0495603_0097562 Ga0495603_0097562_286_1035 225
53 3300046557 Ga0495622_0012426 Ga0495622_0012426_170_919 225
54 iso_pu_bacteria 2912723979 2912726197 226
55 3300042007 Ga0439449_0000058 Ga0439449_0000058_18814_19563 227
56 3300046506 Ga0495583_0004475 Ga0495583_0004475_1345_2085 227
57 3300047443 Ga0495687_077895 Ga0495687_077895_370_1110 227
58 3300047472 Ga0495686_0000343 Ga0495686_0000343_73539_74279 227
59 3300049575 Ga0501039_0043858 Ga0501039_0043858_447_1193 227
60 3300049584 Ga0501068_0000144 Ga0501068_0000144_1517_2266 227
61 3300049585 Ga0501069_0001700 Ga0501069_0001700_2342_3091 227
62 3300049586 Ga0501070_0003349 Ga0501070_0003349_2580_3329 227
63 3300049586 Ga0501070_0023542 Ga0501070_0023542_3041_3781 227
64 3300049592 Ga0501076_0000121 Ga0501076_0000121_3896_4636 227
65 3300049822 Ga0501035_0000207 Ga0501035_0000207_36715_37464 227
66 3300060353 Ga0501082_0014950 Ga0501082_0014950_1294_2034 227
67 3300014497 Ga0182008_10003407 Ga0182008_100034078 228
68 3300015262 Ga0182007_10000523 Ga0182007_1000052339 228
69 3300031456 Ga0307513_10474952 Ga0307513_104749522 228
70 3300037418 Ga0395900_0053388 Ga0395900_0053388_1418_2164 228
71 3300037466 Ga0395898_0282475 Ga0395898_0282475_781_1527 228
72 3300041404 Ga0439436_0023597 Ga0439436_0023597_174_932 228
73 3300042007 Ga0439449_0091322 Ga0439449_0091322_127_870 228
74 3300042014 Ga0439457_002190 Ga0439457_002190_4797_5555 228
75 3300042145 Ga0450906_030717 Ga0450906_030717_156_899 228
76 3300042157 Ga0439458_0000658 Ga0439458_0000658_6040_6783 228
77 3300046648 Ga0495611_0002436 Ga0495611_0002436_6173_6922 228
78 3300048908 Ga0496105_0000618 Ga0496105_0000618_19040_19783 228
79 3300031730 Ga0307516_10000129 Ga0307516_10000129118 229
80 3300037312 Ga0395899_0045856 Ga0395899_0045856_595_1350 229
81 3300038443 Ga0395901_0334797 Ga0395901_0334797_363_1118 229
82 3300042014 Ga0439457_032532 Ga0439457_032532_126_887 229
83 3300042131 Ga0450894_000306 Ga0450894_000306_5245_6006 229
84 3300042132 Ga0450895_000079 Ga0450895_000079_1026_1787 229
85 3300042135 Ga0450899_001828 Ga0450899_001828_682_1443 229
86 3300042145 Ga0450906_000634 Ga0450906_000634_5504_6265 229
87 3300042146 Ga0450907_000379 Ga0450907_000379_8455_9216 229
88 3300042157 Ga0439458_0028146 Ga0439458_0028146_518_1264 229
89 3300042184 Ga0450908_000499 Ga0450908_000499_5504_6265 229
90 3300046455 Ga0495603_0001191 Ga0495603_0001191_10349_11098 229
91 3300046475 Ga0495639_0047463 Ga0495639_0047463_731_1480 229
92 3300046492 Ga0495585_0208012 Ga0495585_0208012_64_828 229
93 3300046499 Ga0495594_0001789 Ga0495594_0001789_6905_7654 229
94 3300046557 Ga0495622_0013503 Ga0495622_0013503_2264_3013 229
95 3300046674 Ga0495588_0000556 Ga0495588_0000556_6911_7660 229
96 3300046680 Ga0495646_0010217 Ga0495646_0010217_4157_4903 229
97 3300047315 Ga0495581_0001021 Ga0495581_0001021_3476_4225 229
98 3300047315 Ga0495581_0014988 Ga0495581_0014988_733_1482 229
99 3300047317 Ga0495604_0001254 Ga0495604_0001254_6054_6818 229
100 3300047447 Ga0495685_015800 Ga0495685_015800_1704_2453 229
101 3300047447 Ga0495685_034635 Ga0495685_034635_60_809 229
102 3300048909 Ga0496106_0160073 Ga0496106_0160073_429_1178 229
103 3300006948 Ga0099826_10055686 Ga0099826_100556863 230
104 3300027666 Ga0209282_1097781 Ga0209282_10977812 230
105 3300041498 Ga0451841_0964945 Ga0451841_0964945_96_899 230
106 3300041512 Ga0451853_2059745 Ga0451853_2059745_53_856 230
107 3300042138 Ga0450903_008123 Ga0450903_008123_484_1272 230
108 3300042533 Ga0450901_006938 Ga0450901_006938_296_1084 230
109 3300046518 Ga0495631_0070497 Ga0495631_0070497_97_852 230
110 3300046536 Ga0495587_0009726 Ga0495587_0009726_1381_2139 230
111 3300046536 Ga0495587_0162535 Ga0495587_0162535_205_957 230
112 3300046558 Ga0495633_0160583 Ga0495633_0160583_43_798 230
113 3300046615 Ga0495656_0000510 Ga0495656_0000510_7706_8464 230
114 3300046675 Ga0495657_0015155 Ga0495657_0015155_4048_4800 230
115 3300046689 Ga0495613_0033907 Ga0495613_0033907_1143_1901 230
116 3300046809 Ga0495600_0000056 Ga0495600_0000056_57206_57964 230
117 3300047444 Ga0495675_0001089 Ga0495675_0001089_14537_15295 230
118 3300047444 Ga0495675_0001611 Ga0495675_0001611_7054_7809 230
119 3300047445 Ga0495677_0003646 Ga0495677_0003646_4107_4862 230
120 3300047447 Ga0495685_000985 Ga0495685_000985_4533_5291 230
121 3300049822 Ga0501035_0094924 Ga0501035_0094924_1860_2609 230
122 3300046524 Ga0495648_0020884 Ga0495648_0020884_1269_2024 231
123 3300005614 Ga0068856_100043177 Ga0068856_1000431772 232
124 3300026078 Ga0207702_10192225 Ga0207702_101922252 232
125 3300042157 Ga0439458_0005526 Ga0439458_0005526_1659_2423 232
126 3300046455 Ga0495603_0000125 Ga0495603_0000125_6551_7315 232
127 3300046492 Ga0495585_0018240 Ga0495585_0018240_2414_3178 232
128 3300046499 Ga0495594_0000040 Ga0495594_0000040_49979_50743 232
129 3300046557 Ga0495622_0001058 Ga0495622_0001058_6470_7234 232
130 3300046642 Ga0495634_0131131 Ga0495634_0131131_246_1010 232
131 3300046660 Ga0495625_0318515 Ga0495625_0318515_82_837 232
132 3300047315 Ga0495581_0111749 Ga0495581_0111749_362_1126 232
133 3300047323 Ga0495683_0016517 Ga0495683_0016517_2679_3443 232
134 3300047443 Ga0495687_022296 Ga0495687_022296_422_1186 232
135 3300047443 Ga0495687_084018 Ga0495687_084018_245_1006 232
136 3300047443 Ga0495687_090576 Ga0495687_090576_204_968 232
137 3300047447 Ga0495685_021113 Ga0495685_021113_339_1103 232
138 3300047447 Ga0495685_022445 Ga0495685_022445_1200_1964 232
139 3300047470 Ga0495681_0035068 Ga0495681_0035068_1351_2106 232

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF24623

153

241

0.78

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pLDDT pTM Quality
76.35 0.47 Low
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Predicted Structure (AlphaFold2)

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