F175668

General Info

Members Datasets Scaffolds Average Seq Length
139 114 139 208

Family's Representative Sequence

Representative Sequence 3300005518|Ga0070699_100294598|Ga0070699_1002945982
Length 214
Sequence MIASMSAHVVTSEEVERTISAFTRLDQKGDKKAMNKLAQRLQKEQPFLLQHAAATRSEHGDATGEAAVFYATLVWAMFDRKDDAATLPRITGQNLADADRVVTEALGAIDGIADKPPHERVAPKLVAAQPHIYAKLGELLAEDVKENAMTLDTANAIVKPTQVVIEAFDAAMSGRRPGEKQGTVVATSKVGRNEPCPCGSGKKYKKCHGGLEAG

Samples

Sample ID Description Type Environment
1 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
5 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
15 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
21 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
23 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
24 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
56 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
57 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
58 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
59 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
60 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
61 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
62 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
63 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
66 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
67 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
68 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
69 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
70 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
71 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
72 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
78 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
79 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
80 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
81 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
84 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
85 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
88 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
89 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
90 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
91 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
92 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
93 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
94 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
95 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
96 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
97 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
98 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
99 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
100 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
101 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
102 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
103 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
104 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
105 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
106 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
107 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
108 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
109 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
110 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
111 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
112 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
113 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
114 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.99
Nodule 0
Rhizoplane 1.44
Rhizosphere 71.94
Stem 0
Stem Tuber 0
Unclassified 8.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070690_100447849 3300005330 Bacteria 957
2 Ga0068869_100227536 3300005334 Bacteria 1481
3 Ga0070689_100019440 3300005340 Bacteria 5023
4 Ga0070689_100023398 3300005340 Bacteria 4624
5 Ga0070689_100034327 3300005340 Bacteria 3870
6 Ga0070692_10476688 3300005345 Bacteria 804
7 Ga0070688_100091318 3300005365 Bacteria 1990
8 Ga0070710_10266118 3300005437 Bacteria 1107
9 Ga0070685_10077659 3300005466 Bacteria 1983
10 Ga0070706_100046299 3300005467 Bacteria 4016
11 Ga0070698_100001803 3300005471 Bacteria 23842
12 Ga0070699_100294598 3300005518 Bacteria 1455
13 Ga0070684_100291196 3300005535 Bacteria 1497
14 Ga0068857_100618829 3300005577 Bacteria 1024
15 Ga0068856_100039784 3300005614 Bacteria 4616
16 Ga0068866_10115508 3300005718 Bacteria 1504
17 Ga0068851_10156235 3300005834 Bacteria 1250
18 Ga0068863_100039414 3300005841 Bacteria 4495
19 Ga0068863_100053902 3300005841 Bacteria 3812
20 Ga0068858_100072561 3300005842 Bacteria 3194
21 Ga0068860_100079135 3300005843 Bacteria 3126
22 Ga0070717_10013268 3300006028 Bacteria 6307
23 Ga0070717_10019220 3300006028 Bacteria 5355
24 Ga0070712_100631255 3300006175 Bacteria 909
25 Ga0097621_100741391 3300006237 Bacteria 907
26 Ga0068871_100107137 3300006358 Bacteria 2347
27 Ga0068865_100061380 3300006881 Bacteria 2635
28 Ga0075435_100156135 3300007076 Bacteria 1920
29 Ga0111539_11433663 3300009094 Bacteria 801
30 Ga0105242_10614408 3300009176 Bacteria 1052
31 Ga0105237_10531037 3300009545 Bacteria 1183
32 Ga0105249_10203454 3300009553 Bacteria 1939
33 Ga0105239_10049512 3300010375 Bacteria 4607
34 Ga0157374_10728072 3300013296 Bacteria 1006
35 Ga0157378_10211259 3300013297 Bacteria 1840
36 Ga0163163_10939965 3300014325 Bacteria 928
37 Ga0157377_10614262 3300014745 Bacteria 777
38 Ga0157376_10029676 3300014969 Bacteria 4358
39 Ga0157376_10463338 3300014969 Bacteria 1239
40 Ga0207656_10134321 3300025321 Bacteria 1162
41 Ga0207699_10359208 3300025906 Bacteria 1030
42 Ga0207684_10284136 3300025910 Bacteria 1427
43 Ga0207662_10021337 3300025918 Bacteria 3701
44 Ga0207687_10004022 3300025927 Bacteria 9853
45 Ga0207687_10042817 3300025927 Bacteria 3117
46 Ga0207670_10029262 3300025936 Bacteria 3508
47 Ga0207670_10529149 3300025936 Bacteria 961
48 Ga0207669_10056873 3300025937 Bacteria 2378
49 Ga0207704_10324132 3300025938 Bacteria 1189
50 Ga0207689_10121982 3300025942 Bacteria 2144
51 Ga0207661_10250771 3300025944 Bacteria 1573
52 Ga0207712_10572455 3300025961 Bacteria 974
53 Ga0207668_10182727 3300025972 Bacteria 1656
54 Ga0207703_10078912 3300026035 Bacteria 2737
55 Ga0207702_10182508 3300026078 Bacteria 1933
56 Ga0207641_10019058 3300026088 Bacteria 5628
57 Ga0207641_10045739 3300026088 Bacteria 3688
58 Ga0207676_10575166 3300026095 Bacteria 1079
59 Ga0207676_10651409 3300026095 Bacteria 1016
60 Ga0207676_10907501 3300026095 Bacteria 864
61 Ga0207674_10885412 3300026116 Bacteria 861
62 Ga0207675_100610030 3300026118 Bacteria 1095
63 Ga0207683_10003603 3300026121 Bacteria 13500
64 Ga0268264_10046266 3300028381 Bacteria 3614
65 Ga0268264_10270259 3300028381 Bacteria 1588
66 Ga0307517_10085370 3300028786 Bacteria 2645
67 Ga0307515_10006054 3300028794 Bacteria 24310
68 Ga0265338_10020962 3300028800 Bacteria 6838
69 Ga0265338_10101193 3300028800 Bacteria 2347
70 Ga0307513_10003940 3300031456 Bacteria 19964
71 Ga0307509_10000396 3300031507 Bacteria 73104
72 Ga0307509_10000945 3300031507 Bacteria 49660
73 Ga0307509_10055640 3300031507 Bacteria 4203
74 Ga0307509_10078500 3300031507 Bacteria 3420
75 Ga0307508_10012927 3300031616 Bacteria 7633
76 Ga0307516_10047395 3300031730 Bacteria 4235
77 Ga0307405_10283255 3300031731 Bacteria 1249
78 Ga0307406_10152457 3300031901 Bacteria 1650
79 Ga0307415_100175973 3300032126 Bacteria 1674
80 Ga0307507_10223588 3300033179 Bacteria 1261
81 Ga0373949_0000207 3300035090 Bacteria 22627
82 Ga0373936_0000023 3300035113 Bacteria 135423
83 Ga0373954_0044178 3300035118 Bacteria 2079
84 Ga0373956_0141446 3300035119 Bacteria 1130
85 Ga0373956_0351915 3300035119 Bacteria 702
86 Ga0373961_0000230 3300035241 Bacteria 26225
87 Ga0373931_0545557 3300035691 Bacteria 753
88 Ga0395899_0117625 3300037312 Bacteria 1906
89 Ga0395900_0913980 3300037418 Bacteria 800
90 Ga0395898_0163227 3300037466 Bacteria 2131
91 Ga0395905_0330832 3300037471 Bacteria 1414
92 Ga0395901_0594404 3300038443 Bacteria 1116
93 Ga0451807_1005951 3300041486 Bacteria 1321
94 Ga0451849_1263371 3300041505 Bacteria 706
95 Ga0451853_0380443 3300041512 Bacteria 911
96 Ga0453684_0609645 3300044712 Bacteria 1195
97 Ga0451576_0544832 3300045051 Bacteria 1219
98 Ga0495630_0394629 3300046517 Bacteria 1060
99 Ga0495686_0029480 3300047472 Bacteria 3569
100 Ga0496105_0154356 3300048908 Bacteria 1886
101 Ga0501034_0039165 3300049571 Bacteria 4802
102 Ga0501047_0341392 3300049581 Bacteria 1335
103 Ga0501070_0005500 3300049586 Bacteria 10808
104 Ga0501070_0023400 3300049586 Bacteria 5175
105 Ga0501070_0245085 3300049586 Bacteria 1466
106 Ga0501071_0460211 3300049587 Bacteria 974
107 Ga0501073_0095239 3300049589 Bacteria 2068
108 Ga0501227_006792 3300049665 Bacteria 2455
109 Ga0501080_0122711 3300049742 Bacteria 2407
110 Ga0501083_0050814 3300049744 Bacteria 2789
111 nmdc:mga09592_334226_c1 3300050508 Bacteria 1312
112 nmdc:mga09592_95984_c1 3300050508 Bacteria 2536
113 nmdc:mga0rr50_255853_c1 3300050513 Bacteria 1455
114 Ga0500578_0170097 3300053086 Bacteria 1348
115 Ga0500646_0009426 3300053090 Bacteria 2499
116 Ga0500583_0103765 3300053092 Bacteria 1395
117 Ga0500566_0012134 3300053094 Bacteria 5073
118 Ga0500566_0032113 3300053094 Bacteria 3061
119 Ga0500566_0043236 3300053094 Bacteria 2596
120 Ga0500566_0122232 3300053094 Bacteria 1402
121 Ga0500640_000359 3300053095 Bacteria 10633
122 Ga0500554_000313 3300053102 Bacteria 10495
123 Ga0500562_020396 3300053108 Bacteria 1720
124 Ga0500572_002040 3300053111 Bacteria 5026
125 Ga0500595_000180 3300053119 Bacteria 42688
126 Ga0500597_065841 3300053120 Bacteria 1561
127 Ga0500614_000434 3300053123 Bacteria 10870
128 Ga0500614_007175 3300053123 Bacteria 2345
129 Ga0500559_0004408 3300053136 Bacteria 6691
130 Ga0500568_0034301 3300053139 Bacteria 2077
131 Ga0500568_0047725 3300053139 Bacteria 1695
132 Ga0500603_004351 3300053150 Bacteria 3034
133 Ga0500603_050177 3300053150 Bacteria 1140
134 Ga0500619_042898 3300053154 Bacteria 1436
135 Ga0500622_0038608 3300053156 Bacteria 2491
136 Ga0500630_097149 3300053159 Bacteria 1349
137 Ga0500638_077155 3300053162 Bacteria 1586
138 Ga0500637_0121443 3300053178 Bacteria 1516
139 Ga0501082_0184632 3300060353 Bacteria 1814

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005340 Ga0070689_100019440 Ga0070689_1000194404 204
2 3300005365 Ga0070688_100091318 Ga0070688_1000913182 204
3 3300005841 Ga0068863_100053902 Ga0068863_1000539022 204
4 3300006175 Ga0070712_100631255 Ga0070712_1006312552 204
5 3300014969 Ga0157376_10463338 Ga0157376_104633382 204
6 3300025936 Ga0207670_10029262 Ga0207670_100292623 204
7 3300025937 Ga0207669_10056873 Ga0207669_100568732 204
8 3300026088 Ga0207641_10045739 Ga0207641_100457392 204
9 3300026121 Ga0207683_10003603 Ga0207683_1000360313 204
10 3300031901 Ga0307406_10152457 Ga0307406_101524571 204
11 3300032126 Ga0307415_100175973 Ga0307415_1001759732 204
12 3300037312 Ga0395899_0117625 Ga0395899_0117625_889_1503 204
13 3300037418 Ga0395900_0913980 Ga0395900_0913980_24_638 204
14 3300037466 Ga0395898_0163227 Ga0395898_0163227_1495_2109 204
15 3300038443 Ga0395901_0594404 Ga0395901_0594404_404_1018 204
16 3300047472 Ga0495686_0029480 Ga0495686_0029480_428_1042 204
17 3300005577 Ga0068857_100618829 Ga0068857_1006188292 205
18 3300009553 Ga0105249_10203454 Ga0105249_102034542 205
19 3300025936 Ga0207670_10529149 Ga0207670_105291492 205
20 3300025961 Ga0207712_10572455 Ga0207712_105724552 205
21 3300026118 Ga0207675_100610030 Ga0207675_1006100302 205
22 3300028381 Ga0268264_10270259 Ga0268264_102702592 205
23 3300031731 Ga0307405_10283255 Ga0307405_102832551 205
24 3300046517 Ga0495630_0394629 Ga0495630_0394629_311_928 205
25 3300050508 nmdc:mga09592_334226_c1 nmdc:mga09592_334226_c1_370_990 205
26 3300050508 nmdc:mga09592_95984_c1 nmdc:mga09592_95984_c1_1505_2125 205
27 3300005437 Ga0070710_10266118 Ga0070710_102661182 206
28 3300005535 Ga0070684_100291196 Ga0070684_1002911962 206
29 3300005614 Ga0068856_100039784 Ga0068856_1000397844 206
30 3300005834 Ga0068851_10156235 Ga0068851_101562352 206
31 3300006358 Ga0068871_100107137 Ga0068871_1001071372 206
32 3300006881 Ga0068865_100061380 Ga0068865_1000613802 206
33 3300009545 Ga0105237_10531037 Ga0105237_105310372 206
34 3300010375 Ga0105239_10049512 Ga0105239_100495123 206
35 3300014745 Ga0157377_10614262 Ga0157377_106142621 206
36 3300014969 Ga0157376_10029676 Ga0157376_100296762 206
37 3300025321 Ga0207656_10134321 Ga0207656_101343212 206
38 3300025927 Ga0207687_10004022 Ga0207687_100040227 206
39 3300025938 Ga0207704_10324132 Ga0207704_103241322 206
40 3300025944 Ga0207661_10250771 Ga0207661_102507712 206
41 3300026078 Ga0207702_10182508 Ga0207702_101825082 206
42 3300026095 Ga0207676_10651409 Ga0207676_106514092 206
43 3300031507 Ga0307509_10000945 Ga0307509_1000094538 206
44 3300031616 Ga0307508_10012927 Ga0307508_100129275 206
45 3300033179 Ga0307507_10223588 Ga0307507_102235882 206
46 3300041486 Ga0451807_1005951 Ga0451807_1005951_202_822 206
47 3300041505 Ga0451849_1263371 Ga0451849_1263371_40_660 206
48 3300044712 Ga0453684_0609645 Ga0453684_0609645_545_1180 206
49 3300045051 Ga0451576_0544832 Ga0451576_0544832_292_927 206
50 3300049571 Ga0501034_0039165 Ga0501034_0039165_2315_2935 206
51 3300049581 Ga0501047_0341392 Ga0501047_0341392_217_837 206
52 3300049586 Ga0501070_0005500 Ga0501070_0005500_9505_10125 206
53 3300053139 Ga0500568_0047725 Ga0500568_0047725_428_1054 206
54 3300005330 Ga0070690_100447849 Ga0070690_1004478492 207
55 3300005334 Ga0068869_100227536 Ga0068869_1002275361 207
56 3300005340 Ga0070689_100023398 Ga0070689_1000233984 207
57 3300005340 Ga0070689_100034327 Ga0070689_1000343274 207
58 3300005345 Ga0070692_10476688 Ga0070692_104766881 207
59 3300005466 Ga0070685_10077659 Ga0070685_100776592 207
60 3300005467 Ga0070706_100046299 Ga0070706_1000462992 207
61 3300005471 Ga0070698_100001803 Ga0070698_10000180312 207
62 3300005518 Ga0070699_100294598 Ga0070699_1002945982 207
63 3300005718 Ga0068866_10115508 Ga0068866_101155082 207
64 3300005841 Ga0068863_100039414 Ga0068863_1000394145 207
65 3300005842 Ga0068858_100072561 Ga0068858_1000725616 207
66 3300005843 Ga0068860_100079135 Ga0068860_1000791353 207
67 3300006028 Ga0070717_10013268 Ga0070717_100132683 207
68 3300006028 Ga0070717_10019220 Ga0070717_100192203 207
69 3300006237 Ga0097621_100741391 Ga0097621_1007413912 207
70 3300007076 Ga0075435_100156135 Ga0075435_1001561352 207
71 3300009094 Ga0111539_11433663 Ga0111539_114336631 207
72 3300009176 Ga0105242_10614408 Ga0105242_106144081 207
73 3300013296 Ga0157374_10728072 Ga0157374_107280721 207
74 3300013297 Ga0157378_10211259 Ga0157378_102112592 207
75 3300014325 Ga0163163_10939965 Ga0163163_109399652 207
76 3300025906 Ga0207699_10359208 Ga0207699_103592082 207
77 3300025910 Ga0207684_10284136 Ga0207684_102841362 207
78 3300025918 Ga0207662_10021337 Ga0207662_100213371 207
79 3300025927 Ga0207687_10042817 Ga0207687_100428172 207
80 3300025942 Ga0207689_10121982 Ga0207689_101219822 207
81 3300025972 Ga0207668_10182727 Ga0207668_101827271 207
82 3300026035 Ga0207703_10078912 Ga0207703_100789125 207
83 3300026088 Ga0207641_10019058 Ga0207641_100190582 207
84 3300026095 Ga0207676_10575166 Ga0207676_105751662 207
85 3300026095 Ga0207676_10907501 Ga0207676_109075011 207
86 3300026116 Ga0207674_10885412 Ga0207674_108854121 207
87 3300028381 Ga0268264_10046266 Ga0268264_100462663 207
88 3300028786 Ga0307517_10085370 Ga0307517_100853703 207
89 3300028794 Ga0307515_10006054 Ga0307515_1000605420 207
90 3300028800 Ga0265338_10020962 Ga0265338_100209627 207
91 3300028800 Ga0265338_10101193 Ga0265338_101011933 207
92 3300031456 Ga0307513_10003940 Ga0307513_1000394011 207
93 3300031507 Ga0307509_10000396 Ga0307509_1000039632 207
94 3300031507 Ga0307509_10055640 Ga0307509_100556402 207
95 3300031507 Ga0307509_10078500 Ga0307509_100785003 207
96 3300031730 Ga0307516_10047395 Ga0307516_100473952 207
97 3300035090 Ga0373949_0000207 Ga0373949_0000207_16816_17439 207
98 3300035113 Ga0373936_0000023 Ga0373936_0000023_28139_28765 207
99 3300035118 Ga0373954_0044178 Ga0373954_0044178_178_831 207
100 3300035119 Ga0373956_0141446 Ga0373956_0141446_424_1047 207
101 3300035119 Ga0373956_0351915 Ga0373956_0351915_54_680 207
102 3300035241 Ga0373961_0000230 Ga0373961_0000230_22023_22646 207
103 3300035691 Ga0373931_0545557 Ga0373931_0545557_23_664 207
104 3300037471 Ga0395905_0330832 Ga0395905_0330832_642_1265 207
105 3300041512 Ga0451853_0380443 Ga0451853_0380443_162_785 207
106 3300048908 Ga0496105_0154356 Ga0496105_0154356_580_1218 207
107 3300049586 Ga0501070_0023400 Ga0501070_0023400_51_686 207
108 3300049586 Ga0501070_0245085 Ga0501070_0245085_20_655 207
109 3300049587 Ga0501071_0460211 Ga0501071_0460211_227_862 207
110 3300049589 Ga0501073_0095239 Ga0501073_0095239_1191_1826 207
111 3300049665 Ga0501227_006792 Ga0501227_006792_642_1271 207
112 3300049742 Ga0501080_0122711 Ga0501080_0122711_664_1299 207
113 3300049744 Ga0501083_0050814 Ga0501083_0050814_461_1096 207
114 3300050513 nmdc:mga0rr50_255853_c1 nmdc:mga0rr50_255853_c1_526_1149 207
115 3300053086 Ga0500578_0170097 Ga0500578_0170097_93_857 207
116 3300053090 Ga0500646_0009426 Ga0500646_0009426_1577_2200 207
117 3300053092 Ga0500583_0103765 Ga0500583_0103765_411_1034 207
118 3300053094 Ga0500566_0012134 Ga0500566_0012134_1217_1840 207
119 3300053094 Ga0500566_0032113 Ga0500566_0032113_2001_2624 207
120 3300053094 Ga0500566_0043236 Ga0500566_0043236_182_811 207
121 3300053094 Ga0500566_0122232 Ga0500566_0122232_195_818 207
122 3300053095 Ga0500640_000359 Ga0500640_000359_7341_7964 207
123 3300053102 Ga0500554_000313 Ga0500554_000313_3188_3811 207
124 3300053108 Ga0500562_020396 Ga0500562_020396_348_971 207
125 3300053111 Ga0500572_002040 Ga0500572_002040_335_958 207
126 3300053119 Ga0500595_000180 Ga0500595_000180_33283_33906 207
127 3300053120 Ga0500597_065841 Ga0500597_065841_70_699 207
128 3300053123 Ga0500614_000434 Ga0500614_000434_7187_7810 207
129 3300053123 Ga0500614_007175 Ga0500614_007175_1338_1967 207
130 3300053136 Ga0500559_0004408 Ga0500559_0004408_6008_6631 207
131 3300053139 Ga0500568_0034301 Ga0500568_0034301_1265_1891 207
132 3300053150 Ga0500603_004351 Ga0500603_004351_1975_2598 207
133 3300053150 Ga0500603_050177 Ga0500603_050177_403_1032 207
134 3300053154 Ga0500619_042898 Ga0500619_042898_635_1258 207
135 3300053156 Ga0500622_0038608 Ga0500622_0038608_1849_2472 207
136 3300053159 Ga0500630_097149 Ga0500630_097149_394_1017 207
137 3300053162 Ga0500638_077155 Ga0500638_077155_620_1249 207
138 3300053178 Ga0500637_0121443 Ga0500637_0121443_440_1063 207
139 3300060353 Ga0501082_0184632 Ga0501082_0184632_139_774 207

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02810

SEC-C

SEC-C motif

192

210

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ohf-assembly4.cif.gz_G globin sensor domain of afgchk (feiii form) in complex with cyanide, partially reduced 0.2924 17 171
5ohf-assembly4.cif.gz_G globin sensor domain of afgchk (feiii form) in complex with cyanide, partially reduced 0.2902 17 171
7ruu-assembly2.cif.gz_D structure of human atp:cobalamin adenosyltransferase r190c bound to adenosylcobalamin 0.2694 42 176
4nwp-assembly1.cif.gz_D computationally designed two-component self-assembling tetrahedral cage, t33-21, crystallized in space group r32 0.2668 42 176
2idx-assembly1.cif.gz_A structure of human atp:cobalamin adenosyltransferase bound to atp. 0.2652 42 176
ID Description Score Start End Superfamily
af_I1K550_171_269_1.20.58.160 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.3708 88 176 1.20.58.160
af_Q0IVV5_36_397_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.3565 89 175 3.40.50.150
af_G3V7K5_580_799_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.3534 44 169 1.20.1640.10
af_A0A1D6JCY5_709_855_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.3415 88 169 1.20.1640.10
af_I1K550_171_269_1.20.58.160 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.3314 88 176 1.20.58.160
ID Description Score Start End GO Terms
AF-A0A838P426-F1-model_v4 Uncharacterized protein 0.8586 6 103
AF-A0A2W4K6D7-F1-model_v4 Uncharacterized protein 0.8363 4 164
AF-A0A661QLG1-F1-model_v4 Uncharacterized protein 0.8324 6 164
AF-A0A7C5UAT3-F1-model_v4 RsbT co-antagonist protein RsbRD N-terminal domain-containing protein 0.83 4 170
AF-A0A3M2DLG7-F1-model_v4 SEC-C domain-containing protein 0.8292 2 205

Feature Viewer

pLDDT pTM Quality
86.04 0.79 High
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Predicted Structure (AlphaFold2)

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