F172788

General Info

Members Datasets Scaffolds Average Seq Length
138 82 129 275

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100259564|Ga0075430_1002595642
Length 291
Sequence MAWPFLHSSEWICYNHFMGTLYLVATPIGNLEDMSPRAVRILREASLIAAEDTRHTGKLLQHFEIGTPITSYFEHNKLNKLDYILEKLSTGDVALVSDAGTPAVNDPGYELVQAALDANHDVKPVPGPSAPITALTVSGLPTDSFLYLGYLPHKTSERHRRLEEVESQPYTLVFLESPYRIVEALEDILLVLGDRRVCVAREMTKMFEEYWRGNISGAVRYFNSQPARGEFTLVVDGKKEDGHLKWSEEQLQKAIENELKNEKSAKEISVELAKQSGWNKKDVYRLINQRD

Samples

Sample ID Description Type Environment
1 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 2617270889 Nostoc punctiforme PCC 73102 Isolate Unclassified
4 2831426010 Nostoc sp. 106C Isolate Unclassified
5 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
6 2849660919 Nostoc sp. T09 Isolate Unclassified
7 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
8 2913844669 Nostocales cyanobacterium LEGE 12452 Isolate Unclassified
9 2913912277 Desmonostoc muscorum LEGE 12446 Isolate Unclassified
10 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
11 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
12 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
13 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
14 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
45 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
46 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
47 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
48 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
49 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
52 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
53 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
54 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
55 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
56 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
57 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
58 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
59 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
60 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
61 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
62 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
63 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
66 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
67 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
69 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
70 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
71 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
72 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
73 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
74 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
75 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
76 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
77 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
78 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
79 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
80 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
81 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
82 642555144 Nostoc punctiforme PCC 73102 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.48
Metatranscriptomes 0
Isolates 6.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 91.3
Stem 0
Stem Tuber 0
Unclassified 8.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL3b_contig_2746789 2162886006 Bacteria 1402
2 SwRhRL2b_contig_2650177 2162886007 Bacteria 8029
3 JGI25406J46586_10009102 3300003203 Bacteria 4458
4 Ga0065704_10000299 3300005289 Bacteria 46457
5 Ga0065712_10170970 3300005290 Bacteria 1244
6 Ga0065707_10000477 3300005295 Bacteria 33700
7 Ga0065707_10087045 3300005295 Bacteria 5190
8 Ga0065707_10087415 3300005295 Bacteria 5028
9 Ga0070689_100166898 3300005340 Unclassified 1782
10 Ga0070694_100116687 3300005444 Bacteria 1910
11 Ga0070698_100189944 3300005471 Unclassified 1992
12 Ga0070698_100616014 3300005471 Bacteria 1026
13 Ga0070699_100080257 3300005518 Bacteria 2843
14 Ga0070699_100177097 3300005518 Bacteria 1891
15 Ga0068859_100031950 3300005617 Bacteria 5289
16 Ga0068859_100081899 3300005617 Bacteria 3270
17 Ga0068864_100687470 3300005618 Bacteria 998
18 Ga0068861_100092702 3300005719 Bacteria 2387
19 Ga0068858_100468500 3300005842 Bacteria 1215
20 Ga0068862_100128767 3300005844 Bacteria 2237
21 Ga0081539_10005114 3300005985 Bacteria 13722
22 Ga0070717_10074640 3300006028 Bacteria 2835
23 Ga0075427_10000060 3300006194 Bacteria 8289
24 Ga0075428_100070656 3300006844 Bacteria 3816
25 Ga0075430_100259564 3300006846 Unclassified 1439
26 Ga0075431_100040429 3300006847 Bacteria 4806
27 Ga0075433_10354474 3300006852 Unclassified 1296
28 Ga0075434_100127354 3300006871 Unclassified 2563
29 Ga0075429_100019806 3300006880 Bacteria 5833
30 Ga0075429_100200397 3300006880 Unclassified 1749
31 Ga0075429_100217125 3300006880 Bacteria 1675
32 Ga0075429_100309134 3300006880 Bacteria 1384
33 Ga0097620_100031948 3300006931 Bacteria 5289
34 Ga0097620_100081902 3300006931 Bacteria 3270
35 Ga0111539_10137211 3300009094 Unclassified 2864
36 Ga0114129_10006902 3300009147 Bacteria 16151
37 Ga0114129_10009191 3300009147 Bacteria 14090
38 Ga0114129_10011056 3300009147 Bacteria 12858
39 Ga0114129_10073656 3300009147 Unclassified 4758
40 Ga0114129_10202247 3300009147 Bacteria 2689
41 Ga0114129_10253790 3300009147 Bacteria 2360
42 Ga0105242_10055685 3300009176 Unclassified 3235
43 Ga0105249_10058448 3300009553 Unclassified 3534
44 Ga0105249_10076884 3300009553 Bacteria 3095
45 Ga0105246_10048866 3300011119 Unclassified 2894
46 Ga0105246_10437403 3300011119 Bacteria 1096
47 Ga0157379_10339301 3300014968 Unclassified 1374
48 Ga0207646_10133997 3300025922 Bacteria 2231
49 Ga0207703_10427423 3300026035 Bacteria 1234
50 Ga0207676_10225507 3300026095 Bacteria 1672
51 Ga0207676_10858888 3300026095 Bacteria 888
52 Ga0268265_10018561 3300028380 Unclassified 4822
53 Ga0265320_10057173 3300031240 Bacteria 1872
54 Ga0265340_10001070 3300031247 Bacteria 15581
55 Ga0265331_10008570 3300031250 Bacteria 5807
56 Ga0307408_100117985 3300031548 Unclassified 2051
57 Ga0316579_10002717 3300031691 Bacteria 6738
58 Ga0316578_10031708 3300031728 Bacteria 3014
59 Ga0307416_100614866 3300032002 Unclassified 1168
60 Ga0307411_10078976 3300032005 Bacteria 2258
61 Ga0316585_10061447 3300032137 Bacteria 1214
62 Ga0373923_0076259 3300035111 Bacteria 1447
63 Ga0373946_0015297 3300035171 Bacteria 2907
64 Ga0316574_0134091 3300035398 Bacteria 1594
65 Ga0316582_0007465 3300036647 Bacteria 5824
66 Ga0316582_0064200 3300036647 Bacteria 2362
67 Ga0316582_0129486 3300036647 Bacteria 1694
68 Ga0316584_0048096 3300036712 Bacteria 3187
69 Ga0316584_0050245 3300036712 Bacteria 3117
70 Ga0316581_0002988 3300037588 Bacteria 4155
71 Ga0436364_0949464 3300037853 Bacteria 2213
72 Ga0237819_07499 3300038705 Bacteria 1563
73 Ga0400483_081809 3300039062 Bacteria 1856
74 Ga0451577_0090063 3300042876 Bacteria 2738
75 Ga0453683_0016912 3300044673 Bacteria 4702
76 Ga0453683_0021672 3300044673 Bacteria 4100
77 Ga0453683_0084494 3300044673 Unclassified 1989
78 Ga0453684_0000164 3300044712 Bacteria 296093
79 Ga0453684_0003572 3300044712 Bacteria 34724
80 Ga0453684_0006247 3300044712 Bacteria 22825
81 Ga0453684_0010673 3300044712 Bacteria 15625
82 Ga0453684_0015933 3300044712 Bacteria 11819
83 Ga0453684_0036567 3300044712 Bacteria 6765
84 Ga0453684_0077038 3300044712 Bacteria 4183
85 Ga0453684_0103873 3300044712 Bacteria 3470
86 Ga0453684_0114956 3300044712 Unclassified 3261
87 Ga0453684_0175069 3300044712 Unclassified 2525
88 Ga0453684_0252632 3300044712 Bacteria 2024
89 Ga0453684_0268871 3300044712 Bacteria 1949
90 Ga0453684_0320037 3300044712 Bacteria 1757
91 Ga0453684_0386498 3300044712 Bacteria 1570
92 Ga0453684_0477204 3300044712 Bacteria 1384
93 Ga0453684_0679584 3300044712 Bacteria 1121
94 Ga0451576_0000322 3300045051 Bacteria 116299
95 Ga0451576_0006106 3300045051 Bacteria 14847
96 Ga0451576_0028434 3300045051 Bacteria 5988
97 Ga0451576_0050522 3300045051 Bacteria 4360
98 Ga0451576_0077774 3300045051 Unclassified 3453
99 Ga0451576_0155510 3300045051 Bacteria 2385
100 Ga0451576_0311072 3300045051 Unclassified 1648
101 Ga0501299_025190 3300049522 Bacteria 1115
102 Ga0501041_0189818 3300049577 Bacteria 1287
103 Ga0501072_0177689 3300049588 Unclassified 1698
104 Ga0501076_0004369 3300049592 Bacteria 10039
105 Ga0501076_0074768 3300049592 Unclassified 2715
106 Ga0501079_0233914 3300049741 Bacteria 1436
107 Ga0501080_0074027 3300049742 Bacteria 3169
108 Ga0501080_0174231 3300049742 Unclassified 1983
109 Ga0501081_0042480 3300049743 Bacteria 3116
110 Ga0501081_0173580 3300049743 Unclassified 1557
111 nmdc:mga05p37_12724_c1 3300050507 Bacteria 10059
112 nmdc:mga05p37_179607_c1 3300050507 Unclassified 2576
113 nmdc:mga05p37_272029_c1 3300050507 Bacteria 2024
114 nmdc:mga05p37_6183_c1 3300050507 Bacteria 14094
115 nmdc:mga05p37_83169_c1 3300050507 Bacteria 3943
116 nmdc:mga09592_111987_c1 3300050508 Bacteria 2342
117 nmdc:mga09592_142416_c1 3300050508 Unclassified 2067
118 nmdc:mga09592_332335_c1 3300050508 Bacteria 1316
119 nmdc:mga09592_43795_c1 3300050508 Bacteria 3765
120 nmdc:mga09592_558991_c1 3300050508 Unclassified 982
121 nmdc:mga0qj67_119244_c1 3300050509 Unclassified 2133
122 nmdc:mga06r32_136870_c1 3300050510 Bacteria 2424
123 nmdc:mga08y16_126831_c1 3300050511 Unclassified 2654
124 nmdc:mga0a205_470900_c1 3300050515 Bacteria 1115
125 Ga0501084_0001475 3300054114 Bacteria 18682
126 Ga0501084_0042790 3300054114 Unclassified 3789
127 Ga0501084_0315857 3300054114 Unclassified 1320
128 Ga0501082_0108101 3300060353 Unclassified 2407
129 Ga0530510_0455309 3300061734 Bacteria 968

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005471 Ga0070698_100616014 Ga0070698_1006160142 241
2 3300044673 Ga0453683_0021672 Ga0453683_0021672_313_1137 257
3 3300044712 Ga0453684_0477204 Ga0453684_0477204_49_873 257
4 3300050508 nmdc:mga09592_558991_c1 nmdc:mga09592_558991_c1_188_961 257
5 3300044712 Ga0453684_0252632 Ga0453684_0252632_15_791 258
6 3300061734 Ga0530510_0455309 Ga0530510_0455309_161_940 258
7 3300044712 Ga0453684_0003572 Ga0453684_0003572_29854_30681 267
8 3300031240 Ga0265320_10057173 Ga0265320_100571732 272
9 3300031247 Ga0265340_10001070 Ga0265340_1000107011 272
10 3300031250 Ga0265331_10008570 Ga0265331_100085701 272
11 3300031691 Ga0316579_10002717 Ga0316579_100027172 272
12 3300031728 Ga0316578_10031708 Ga0316578_100317084 272
13 3300032137 Ga0316585_10061447 Ga0316585_100614472 272
14 3300035398 Ga0316574_0134091 Ga0316574_0134091_746_1576 272
15 3300036647 Ga0316582_0007465 Ga0316582_0007465_4925_5743 272
16 3300036647 Ga0316582_0064200 Ga0316582_0064200_871_1689 272
17 3300036647 Ga0316582_0129486 Ga0316582_0129486_268_1098 272
18 3300036712 Ga0316584_0048096 Ga0316584_0048096_20_838 272
19 3300036712 Ga0316584_0050245 Ga0316584_0050245_1479_2297 272
20 3300037588 Ga0316581_0002988 Ga0316581_0002988_1385_2203 272
21 3300039062 Ga0400483_081809 Ga0400483_081809_657_1499 272
22 3300049742 Ga0501080_0074027 Ga0501080_0074027_170_1006 272
23 iso_pu_bacteria 2617270889 2617918729 272
24 iso_pu_bacteria 2831426010 2831427599 272
25 iso_pu_bacteria 2848694841 2848696397 272
26 iso_pu_bacteria 2849660919 2849664085 272
27 iso_pu_bacteria 2886627955 2886631602 272
28 iso_pu_bacteria 2913844669 2913852501 272
29 iso_pu_bacteria 2913912277 2913920258 272
30 iso_pu_bacteria 2913939268 2913945761 272
31 iso_pu_bacteria 642555144 642601503 272
32 3300006028 Ga0070717_10074640 Ga0070717_100746401 273
33 3300009094 Ga0111539_10137211 Ga0111539_101372112 273
34 3300026095 Ga0207676_10858888 Ga0207676_108588881 273
35 3300031548 Ga0307408_100117985 Ga0307408_1001179853 273
36 3300035111 Ga0373923_0076259 Ga0373923_0076259_327_1187 273
37 3300035171 Ga0373946_0015297 Ga0373946_0015297_1740_2600 273
38 3300037853 Ga0436364_0949464 Ga0436364_0949464_235_1131 273
39 3300038705 Ga0237819_07499 Ga0237819_07499_675_1532 273
40 3300044712 Ga0453684_0006247 Ga0453684_0006247_13102_13968 273
41 3300050511 nmdc:mga08y16_126831_c1 nmdc:mga08y16_126831_c1_282_1103 273
42 3300054114 Ga0501084_0001475 Ga0501084_0001475_879_1712 273
43 2162886006 SwRhRL3b_contig_2746789 SwRhRL3b_0607.00000360 274
44 2162886007 SwRhRL2b_contig_2650177 SwRhRL2b_0539.00003350 274
45 3300003203 JGI25406J46586_10009102 JGI25406J46586_100091023 274
46 3300005289 Ga0065704_10000299 Ga0065704_100002999 274
47 3300005290 Ga0065712_10170970 Ga0065712_101709702 274
48 3300005295 Ga0065707_10000477 Ga0065707_100004778 274
49 3300005295 Ga0065707_10087045 Ga0065707_100870455 274
50 3300005295 Ga0065707_10087415 Ga0065707_100874154 274
51 3300005340 Ga0070689_100166898 Ga0070689_1001668982 274
52 3300005444 Ga0070694_100116687 Ga0070694_1001166872 274
53 3300005471 Ga0070698_100189944 Ga0070698_1001899442 274
54 3300005518 Ga0070699_100080257 Ga0070699_1000802572 274
55 3300005518 Ga0070699_100177097 Ga0070699_1001770972 274
56 3300005617 Ga0068859_100031950 Ga0068859_1000319503 274
57 3300005617 Ga0068859_100081899 Ga0068859_1000818992 274
58 3300005618 Ga0068864_100687470 Ga0068864_1006874701 274
59 3300005719 Ga0068861_100092702 Ga0068861_1000927022 274
60 3300005842 Ga0068858_100468500 Ga0068858_1004685001 274
61 3300005844 Ga0068862_100128767 Ga0068862_1001287672 274
62 3300005985 Ga0081539_10005114 Ga0081539_100051149 274
63 3300006194 Ga0075427_10000060 Ga0075427_100000604 274
64 3300006844 Ga0075428_100070656 Ga0075428_1000706563 274
65 3300006846 Ga0075430_100259564 Ga0075430_1002595642 274
66 3300006847 Ga0075431_100040429 Ga0075431_1000404294 274
67 3300006852 Ga0075433_10354474 Ga0075433_103544742 274
68 3300006871 Ga0075434_100127354 Ga0075434_1001273542 274
69 3300006880 Ga0075429_100019806 Ga0075429_1000198062 274
70 3300006880 Ga0075429_100200397 Ga0075429_1002003972 274
71 3300006880 Ga0075429_100217125 Ga0075429_1002171252 274
72 3300006880 Ga0075429_100309134 Ga0075429_1003091341 274
73 3300006931 Ga0097620_100031948 Ga0097620_1000319483 274
74 3300006931 Ga0097620_100081902 Ga0097620_1000819022 274
75 3300009147 Ga0114129_10006902 Ga0114129_1000690213 274
76 3300009147 Ga0114129_10009191 Ga0114129_100091919 274
77 3300009147 Ga0114129_10011056 Ga0114129_100110566 274
78 3300009147 Ga0114129_10073656 Ga0114129_100736563 274
79 3300009147 Ga0114129_10202247 Ga0114129_102022472 274
80 3300009147 Ga0114129_10253790 Ga0114129_102537902 274
81 3300009176 Ga0105242_10055685 Ga0105242_100556852 274
82 3300009553 Ga0105249_10058448 Ga0105249_100584482 274
83 3300009553 Ga0105249_10076884 Ga0105249_100768844 274
84 3300011119 Ga0105246_10048866 Ga0105246_100488662 274
85 3300011119 Ga0105246_10437403 Ga0105246_104374031 274
86 3300014968 Ga0157379_10339301 Ga0157379_103393013 274
87 3300025922 Ga0207646_10133997 Ga0207646_101339972 274
88 3300026035 Ga0207703_10427423 Ga0207703_104274232 274
89 3300026095 Ga0207676_10225507 Ga0207676_102255071 274
90 3300028380 Ga0268265_10018561 Ga0268265_100185612 274
91 3300032002 Ga0307416_100614866 Ga0307416_1006148662 274
92 3300032005 Ga0307411_10078976 Ga0307411_100789762 274
93 3300042876 Ga0451577_0090063 Ga0451577_0090063_180_1004 274
94 3300044673 Ga0453683_0016912 Ga0453683_0016912_3002_3826 274
95 3300044673 Ga0453683_0084494 Ga0453683_0084494_943_1767 274
96 3300044712 Ga0453684_0000164 Ga0453684_0000164_16670_17494 274
97 3300044712 Ga0453684_0010673 Ga0453684_0010673_3803_4633 274
98 3300044712 Ga0453684_0015933 Ga0453684_0015933_1794_2618 274
99 3300044712 Ga0453684_0036567 Ga0453684_0036567_4757_5581 274
100 3300044712 Ga0453684_0077038 Ga0453684_0077038_458_1282 274
101 3300044712 Ga0453684_0103873 Ga0453684_0103873_551_1375 274
102 3300044712 Ga0453684_0114956 Ga0453684_0114956_1360_2184 274
103 3300044712 Ga0453684_0175069 Ga0453684_0175069_863_1687 274
104 3300044712 Ga0453684_0268871 Ga0453684_0268871_792_1616 274
105 3300044712 Ga0453684_0320037 Ga0453684_0320037_470_1294 274
106 3300044712 Ga0453684_0386498 Ga0453684_0386498_711_1535 274
107 3300044712 Ga0453684_0679584 Ga0453684_0679584_159_989 274
108 3300045051 Ga0451576_0000322 Ga0451576_0000322_52677_53501 274
109 3300045051 Ga0451576_0006106 Ga0451576_0006106_6938_7762 274
110 3300045051 Ga0451576_0028434 Ga0451576_0028434_422_1246 274
111 3300045051 Ga0451576_0050522 Ga0451576_0050522_1392_2222 274
112 3300045051 Ga0451576_0077774 Ga0451576_0077774_2481_3305 274
113 3300045051 Ga0451576_0155510 Ga0451576_0155510_930_1754 274
114 3300045051 Ga0451576_0311072 Ga0451576_0311072_496_1320 274
115 3300049522 Ga0501299_025190 Ga0501299_025190_281_1105 274
116 3300049577 Ga0501041_0189818 Ga0501041_0189818_12_836 274
117 3300049588 Ga0501072_0177689 Ga0501072_0177689_68_892 274
118 3300049592 Ga0501076_0004369 Ga0501076_0004369_4230_5057 274
119 3300049592 Ga0501076_0074768 Ga0501076_0074768_240_1064 274
120 3300049741 Ga0501079_0233914 Ga0501079_0233914_321_1145 274
121 3300049742 Ga0501080_0174231 Ga0501080_0174231_23_847 274
122 3300049743 Ga0501081_0042480 Ga0501081_0042480_729_1553 274
123 3300049743 Ga0501081_0173580 Ga0501081_0173580_638_1465 274
124 3300050507 nmdc:mga05p37_12724_c1 nmdc:mga05p37_12724_c1_2668_3492 274
125 3300050507 nmdc:mga05p37_179607_c1 nmdc:mga05p37_179607_c1_1340_2164 274
126 3300050507 nmdc:mga05p37_272029_c1 nmdc:mga05p37_272029_c1_583_1407 274
127 3300050507 nmdc:mga05p37_6183_c1 nmdc:mga05p37_6183_c1_4291_5115 274
128 3300050507 nmdc:mga05p37_83169_c1 nmdc:mga05p37_83169_c1_377_1204 274
129 3300050508 nmdc:mga09592_111987_c1 nmdc:mga09592_111987_c1_490_1314 274
130 3300050508 nmdc:mga09592_142416_c1 nmdc:mga09592_142416_c1_1109_1933 274
131 3300050508 nmdc:mga09592_332335_c1 nmdc:mga09592_332335_c1_351_1175 274
132 3300050508 nmdc:mga09592_43795_c1 nmdc:mga09592_43795_c1_1195_2019 274
133 3300050509 nmdc:mga0qj67_119244_c1 nmdc:mga0qj67_119244_c1_1041_1868 274
134 3300050510 nmdc:mga06r32_136870_c1 nmdc:mga06r32_136870_c1_241_1065 274
135 3300050515 nmdc:mga0a205_470900_c1 nmdc:mga0a205_470900_c1_201_1025 274
136 3300054114 Ga0501084_0042790 Ga0501084_0042790_84_911 274
137 3300054114 Ga0501084_0315857 Ga0501084_0315857_245_1069 274
138 3300060353 Ga0501082_0108101 Ga0501082_0108101_1130_1957 274

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00590

TP_methylase

Tetrapyrrole (Corrin/Porphyrin) Methylases

20

218

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hh1-assembly2.cif.gz_C the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.933 2 109
3ffy-assembly1.cif.gz_A-2 putative tetrapyrrole (corrin/porphyrin) methyltransferase from bacteroides fragilis. 0.9282 115 221
3fq6-assembly1.cif.gz_A the crystal structure of a methyltransferase domain from bacteroides thetaiotaomicron vpi 0.923 112 222
3hh1-assembly1.cif.gz_B the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.9089 2 110
3hh1-assembly2.cif.gz_C the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.9069 2 109
ID Description Score Start End Superfamily
3kwpA02 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9421 113 221 3.30.950.10
af_Q338C6_169_282_3.30.950.10 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9319 111 223 3.30.950.10
3hh1C00 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.9313 2 109 3.40.1010.10
af_Q2G1S1_111_230_3.30.950.10 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9253 110 224 3.30.950.10
3ffyA00 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9247 115 221 3.30.950.10
ID Description Score Start End GO Terms
AF-A0A2M7E8N8-F1-model_v4 16S rRNA (Cytidine(1402)-2'-O)-methyltransferase 0.9673 122 223 GO:0005737
GO:0006364
GO:0008168
GO:0032259
AF-A0A535DDB5-F1-model_v4 16S rRNA (Cytidine(1402)-2'-O)-methyltransferase 0.9513 1 108 GO:0008168
GO:0032259
AF-A0A3D4B4N0-F1-model_v4 rRNA (Cytidine-2'-O-)-methyltransferase 0.9506 154 221 GO:0008168
GO:0032259
AF-A0A2M7E8N8-F1-model_v4 16S rRNA (Cytidine(1402)-2'-O)-methyltransferase 0.9491 122 223 GO:0005737
GO:0006364
GO:0008168
GO:0032259
AF-K2DCQ5-F1-model_v4 Tetrapyrrole methylase family protein 0.9474 119 222 GO:0008168
GO:0032259

Feature Viewer

pLDDT pTM Quality
87.33 0.72 High
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Predicted Structure (AlphaFold2)

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