F164918

General Info

Members Datasets Scaffolds Average Seq Length
135 101 270 300

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2786546517|2787438759
Length 358
Sequence ISHSTEYKYGDAVSVSHHSAHLTPREVPERQRTLSASLKISPEPAVRLQRVDYYGNAFTVFIVQEPHDSLVVESRSTVEVLSKPVPDPAKTPAWEEVRDLCAVEVSEEMLAVSEFVYDSTFIKTSPELLEFATPSFPPGRTILAGAIDLTRRINKGFIFDPAATTVSTPLRTVLMSRRGVCQDFAHLQIGCLRALGLPARYVSGYIETMPPAGTTRLRGADASHAWVAVWCPGLGWVDLDPTNNQLCGTQHVTVAWGRDFGDVSPLRGVTYGGGNSFLYVSVDVEAETSDRERSGAGTRLEGAIAGLPAEPARPAAAAPAPPPASAAKADASPGAPSPEPPPAAERTDVDAPAPRLEA

Samples

Sample ID Description Type Environment
1 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
5 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
6 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
7 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
8 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
9 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
10 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
13 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
14 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
15 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
25 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
36 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
37 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
38 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
52 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
53 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
54 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
55 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
56 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
57 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
58 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
59 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
60 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
61 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
62 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
63 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
64 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
65 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
66 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
67 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
68 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
69 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
70 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
71 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
72 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
73 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
74 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
75 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
76 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
77 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
78 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
79 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
80 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
81 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
82 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
83 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
84 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
85 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
86 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
87 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
88 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
89 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
90 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane
91 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
92 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
93 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
94 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
95 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
96 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
97 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
98 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
99 2902330777 Methylobacterium sp. 2A Isolate Unclassified
100 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
101 2928125067 Methylobacterium sp. 1973 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.11
Metatranscriptomes 0
Isolates 8.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.19
Nodule 0
Rhizoplane 2.96
Rhizosphere 82.22
Stem 0
Stem Tuber 0
Unclassified 4.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10178066 3300005328 Bacteria 1380
2 Ga0070670_100057847 3300005331 Bacteria 3327
3 Ga0070682_100062358 3300005337 Bacteria 2361
4 Ga0070673_100117520 3300005364 Unclassified 2213
5 Ga0070663_100284881 3300005455 Bacteria 1318
6 Ga0070672_100285969 3300005543 Bacteria 1395
7 Ga0070665_100000315 3300005548 Bacteria 75175
8 Ga0070665_100067765 3300005548 Bacteria 3579
9 Ga0070664_100159809 3300005564 Bacteria 1993
10 Ga0068864_100003732 3300005618 Bacteria 12573
11 Ga0068864_100231187 3300005618 Bacteria 1710
12 Ga0068858_100066636 3300005842 Bacteria 3334
13 Ga0068858_100116082 3300005842 Bacteria 2502
14 Ga0075364_10012181 3300006051 Bacteria 5251
15 Ga0075362_10000460 3300006177 Bacteria 11818
16 Ga0075367_10000749 3300006178 Bacteria 12646
17 Ga0075366_10007252 3300006195 Bacteria 6112
18 Ga0097621_100011762 3300006237 Bacteria 6463
19 Ga0097621_100104230 3300006237 Bacteria 2390
20 Ga0068871_100004153 3300006358 Bacteria 10024
21 Ga0075428_100126449 3300006844 Bacteria 2782
22 Ga0075430_100000620 3300006846 Bacteria 27115
23 Ga0075430_100081311 3300006846 Bacteria 2714
24 Ga0075431_100039731 3300006847 Bacteria 4848
25 Ga0075433_10236255 3300006852 Bacteria 1623
26 Ga0075429_100072503 3300006880 Bacteria 2999
27 Ga0068865_100041770 3300006881 Bacteria 3123
28 Ga0075435_100216396 3300007076 Bacteria 1626
29 Ga0075435_100397156 3300007076 Bacteria 1185
30 Ga0099794_10008369 3300007265 Bacteria 4294
31 Ga0099794_10051408 3300007265 Bacteria 1984
32 Ga0099795_10001637 3300007788 Bacteria 4952
33 Ga0105240_10039873 3300009093 Bacteria 6010
34 Ga0105243_10496732 3300009148 Bacteria 1155
35 Ga0105248_10176452 3300009177 Bacteria 2408
36 Ga0105248_10341741 3300009177 Bacteria 1685
37 Ga0099796_10003430 3300010159 Bacteria 3676
38 Ga0157370_10273287 3300013104 Bacteria 1561
39 Ga0157375_10069867 3300013308 Bacteria 3520
40 Ga0157375_10211922 3300013308 Bacteria 2095
41 Ga0157375_10682163 3300013308 Bacteria 1182
42 Ga0163163_10231862 3300014325 Bacteria 1895
43 Ga0163163_10328701 3300014325 Bacteria 1583
44 Ga0157380_10091742 3300014326 Bacteria 2508
45 Ga0157379_10016433 3300014968 Bacteria 6510
46 Ga0157376_10133011 3300014969 Bacteria 2222
47 Ga0157376_10172921 3300014969 Bacteria 1968
48 Ga0157376_10187840 3300014969 Bacteria 1893
49 Ga0213872_10001182 3300021361 Bacteria 17723
50 Ga0213872_10015463 3300021361 Bacteria 3546
51 Ga0213872_10055506 3300021361 Bacteria 1796
52 Ga0213876_10186565 3300021384 Bacteria 1103
53 Ga0207645_10165759 3300025907 Bacteria 1447
54 Ga0207663_10045775 3300025916 Bacteria 2693
55 Ga0207691_10119785 3300025940 Bacteria 2334
56 Ga0207691_10123923 3300025940 Bacteria 2288
57 Ga0207711_10034071 3300025941 Bacteria 4312
58 Ga0207689_10258660 3300025942 Bacteria 1440
59 Ga0207661_10034688 3300025944 Bacteria 3927
60 Ga0207651_10117775 3300025960 Unclassified 2008
61 Ga0207703_10032280 3300026035 Bacteria 4144
62 Ga0207703_10191986 3300026035 Unclassified 1809
63 Ga0207676_10022116 3300026095 Bacteria 4675
64 Ga0207676_10200265 3300026095 Bacteria 1764
65 Ga0207675_100432054 3300026118 Bacteria 1302
66 Ga0209588_1006991 3300027671 Bacteria 3306
67 Ga0268266_10016847 3300028379 Bacteria 6245
68 Ga0268266_10171609 3300028379 Bacteria 1969
69 Ga0268264_10318777 3300028381 Bacteria 1469
70 Ga0265323_10000063 3300028653 Bacteria 58892
71 Ga0265323_10012851 3300028653 Bacteria 3348
72 Ga0265323_10043403 3300028653 Bacteria 1623
73 Ga0265322_10000081 3300028654 Bacteria 45549
74 Ga0265338_10048214 3300028800 Bacteria 3879
75 Ga0265330_10052968 3300031235 Bacteria 1777
76 Ga0265327_10011847 3300031251 Bacteria 5957
77 Ga0265316_10000676 3300031344 Bacteria 37951
78 Ga0265316_10013237 3300031344 Bacteria 7341
79 Ga0265316_10084648 3300031344 Bacteria 2428
80 Ga0307513_10048810 3300031456 Bacteria 4590
81 Ga0307508_10027464 3300031616 Bacteria 5151
82 Ga0265342_10002459 3300031712 Bacteria 15969
83 Ga0307516_10004141 3300031730 Bacteria 18086
84 Ga0373939_0051520 3300035114 Bacteria 1280
85 Ga0373925_0431897 3300037068 Bacteria 1077
86 Ga0436365_1527877 3300039437 Bacteria 2852
87 Ga0436361_0111416 3300039447 Bacteria 1904
88 Ga0436361_0182304 3300039447 Bacteria 13195
89 Ga0436361_0225564 3300039447 Bacteria 13191
90 Ga0436361_0464668 3300039447 Bacteria 18222
91 Ga0436361_0495707 3300039447 Bacteria 4697
92 Ga0436361_0651093 3300039447 Bacteria 3174
93 Ga0436361_1004656 3300039447 Bacteria 1007
94 Ga0453684_0478238 3300044712 Bacteria 1382
95 Ga0466968_0001569 3300044735 Bacteria 8239
96 Ga0451576_0000194 3300045051 Bacteria 154080
97 Ga0451576_0075148 3300045051 Bacteria 3516
98 Ga0495638_0085603 3300046460 Bacteria 1906
99 Ga0495650_0075447 3300046471 Unclassified 1312
100 Ga0495594_0108397 3300046499 Unclassified 1565
101 Ga0495640_0047536 3300046533 Bacteria 2969
102 Ga0495586_0037954 3300046535 Bacteria 2586
103 Ga0495634_0135355 3300046642 Bacteria 1568
104 Ga0495611_0101251 3300046648 Bacteria 1338
105 Ga0495624_0211587 3300046690 Unclassified 1176
106 Ga0495686_0127345 3300047472 Bacteria 1513
107 Ga0496104_0026469 3300048907 Bacteria 5357
108 Ga0496114_0039806 3300048917 Bacteria 3890
109 Ga0496114_0337492 3300048917 Bacteria 1332
110 Ga0501083_0006751 3300049744 Bacteria 8145
111 nmdc:mga00v17_8989_c1 3300050491 Bacteria 5391
112 nmdc:mga0k408_73866_c1 3300050493 Bacteria 1992
113 nmdc:mga05p37_285529_c1 3300050507 Bacteria 1966
114 nmdc:mga05p37_328497_c1 3300050507 Bacteria 1807
115 nmdc:mga09592_40991_c1 3300050508 Bacteria 3892
116 nmdc:mga0qj67_2930_c1 3300050509 Bacteria 12243
117 nmdc:mga0qj67_38370_c1 3300050509 Bacteria 3758
118 nmdc:mga06r32_32377_c1 3300050510 Bacteria 4918
119 nmdc:mga0rr50_211436_c1 3300050513 Bacteria 1598
120 nmdc:mga0rr50_38172_c1 3300050513 Bacteria 3473
121 Ga0495595_0064457 3300053084 Bacteria 1722
122 Ga0495619_0020847 3300053085 Bacteria 4181
123 Ga0500616_0012919 3300053153 Bacteria 4866
124 2787438759 2786546517 Bacteria 6614109
125 2596371155 2595698237 Bacteria 6712432
126 2644505728 2643221690 Bacteria 4654705
127 2644524429 2643221694 Bacteria 4392972
128 2644668530 2643221722 Bacteria 4247614
129 2687237598 2684623219 Bacteria 8442773
130 2829749187 2829745981 Bacteria 5406054
131 2861695053 2861691609 Bacteria 5628931
132 2889312096 2889306138 Bacteria 6358934
133 2902334279 2902330777 Bacteria 6395352
134 2902406028 2902405164 Bacteria 6784948
135 2928125965 2928125067 Bacteria 5937560
136 Ga0070676_10178066
137 Ga0070670_100057847
138 Ga0070682_100062358
139 Ga0070673_100117520
140 Ga0070663_100284881
141 Ga0070672_100285969
142 Ga0070665_100000315
143 Ga0070665_100067765
144 Ga0070664_100159809
145 Ga0068864_100003732
146 Ga0068864_100231187
147 Ga0068858_100066636
148 Ga0068858_100116082
149 Ga0075364_10012181
150 Ga0075362_10000460
151 Ga0075367_10000749
152 Ga0075366_10007252
153 Ga0097621_100011762
154 Ga0097621_100104230
155 Ga0068871_100004153
156 Ga0075428_100126449
157 Ga0075430_100000620
158 Ga0075430_100081311
159 Ga0075431_100039731
160 Ga0075433_10236255
161 Ga0075429_100072503
162 Ga0068865_100041770
163 Ga0075435_100216396
164 Ga0075435_100397156
165 Ga0099794_10008369
166 Ga0099794_10051408
167 Ga0099795_10001637
168 Ga0105240_10039873
169 Ga0105243_10496732
170 Ga0105248_10176452
171 Ga0105248_10341741
172 Ga0099796_10003430
173 Ga0157370_10273287
174 Ga0157375_10069867
175 Ga0157375_10211922
176 Ga0157375_10682163
177 Ga0163163_10231862
178 Ga0163163_10328701
179 Ga0157380_10091742
180 Ga0157379_10016433
181 Ga0157376_10133011
182 Ga0157376_10172921
183 Ga0157376_10187840
184 Ga0213872_10001182
185 Ga0213872_10015463
186 Ga0213872_10055506
187 Ga0213876_10186565
188 Ga0207645_10165759
189 Ga0207663_10045775
190 Ga0207691_10119785
191 Ga0207691_10123923
192 Ga0207711_10034071
193 Ga0207689_10258660
194 Ga0207661_10034688
195 Ga0207651_10117775
196 Ga0207703_10032280
197 Ga0207703_10191986
198 Ga0207676_10022116
199 Ga0207676_10200265
200 Ga0207675_100432054
201 Ga0209588_1006991
202 Ga0268266_10016847
203 Ga0268266_10171609
204 Ga0268264_10318777
205 Ga0265323_10000063
206 Ga0265323_10012851
207 Ga0265323_10043403
208 Ga0265322_10000081
209 Ga0265338_10048214
210 Ga0265330_10052968
211 Ga0265327_10011847
212 Ga0265316_10000676
213 Ga0265316_10013237
214 Ga0265316_10084648
215 Ga0307513_10048810
216 Ga0307508_10027464
217 Ga0265342_10002459
218 Ga0307516_10004141
219 Ga0373939_0051520
220 Ga0373925_0431897
221 Ga0436365_1527877
222 Ga0436361_0111416
223 Ga0436361_0182304
224 Ga0436361_0225564
225 Ga0436361_0464668
226 Ga0436361_0495707
227 Ga0436361_0651093
228 Ga0436361_1004656
229 Ga0453684_0478238
230 Ga0466968_0001569
231 Ga0451576_0000194
232 Ga0451576_0075148
233 Ga0495638_0085603
234 Ga0495650_0075447
235 Ga0495594_0108397
236 Ga0495640_0047536
237 Ga0495586_0037954
238 Ga0495634_0135355
239 Ga0495611_0101251
240 Ga0495624_0211587
241 Ga0495686_0127345
242 Ga0496104_0026469
243 Ga0496114_0039806
244 Ga0496114_0337492
245 Ga0501083_0006751
246 nmdc:mga00v17_8989_c1
247 nmdc:mga0k408_73866_c1
248 nmdc:mga05p37_285529_c1
249 nmdc:mga05p37_328497_c1
250 nmdc:mga09592_40991_c1
251 nmdc:mga0qj67_2930_c1
252 nmdc:mga0qj67_38370_c1
253 nmdc:mga06r32_32377_c1
254 nmdc:mga0rr50_211436_c1
255 nmdc:mga0rr50_38172_c1
256 Ga0495595_0064457
257 Ga0495619_0020847
258 Ga0500616_0012919
259 2787438759
260 2596371155
261 2644505728
262 2644524429
263 2644668530
264 2687237598
265 2829749187
266 2861695053
267 2889312096
268 2902334279
269 2902406028
270 2928125965

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08379

Bact_transglu_N

Bacterial transglutaminase-like N-terminal region

1

79

0.98

PF01841

Transglut_core

Transglutaminase-like superfamily

131

241

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3isr-assembly1.cif.gz_B the crystal structure of a putative cysteine protease from cytophaga hutchinsonii to 1.9a 0.8383 2 300
2f4o-assembly1.cif.gz_A the mouse pngase-hr23 complex reveals a complete remodulation of the protein-protein interface compared to its yeast orthologs 0.8176 177 253
3isr-assembly1.cif.gz_B the crystal structure of a putative cysteine protease from cytophaga hutchinsonii to 1.9a 0.7843 2 300
4ktr-assembly4.cif.gz_H crystal structure of 2-o-alpha-glucosylglycerol phosphorylase in complex with isofagomine and glycerol 0.703 38 85
4ktp-assembly1.cif.gz_B crystal structure of 2-o-alpha-glucosylglycerol phosphorylase in complex with glucose 0.6889 43 85
ID Description Score Start End Superfamily
af_P9WL93_122_301_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.8938 120 280 3.10.620.30
af_P71734_77_269_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.8294 89 283 3.10.620.30
af_Q50732_135_318_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.8101 119 277 3.10.620.30
af_P9WL93_122_301_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.7992 120 280 3.10.620.30
af_P71734_77_269_3.10.620.30 Alpha Beta;Roll;C8orf32 fold; 0.7816 89 283 3.10.620.30
ID Description Score Start End GO Terms
AF-A0A2C6Y655-F1-model_v4 Transglutaminase 0.9721 5 295
AF-A0A494Y0Y1-F1-model_v4 Transglutaminase family protein 0.972 3 295
AF-A0A517Z1K8-F1-model_v4 Protein-glutamine gamma-glutamyltransferase (EC 2.3.2.13) 0.9718 6 295 GO:0003810
AF-A0A7Y6R9G0-F1-model_v4 Transglutaminase family protein 0.9715 6 297
AF-A0A4V1UCN6-F1-model_v4 Transglutaminase family protein 0.9705 6 92

Map