F150519

General Info

Members Datasets Scaffolds Average Seq Length
131 96 128 355

Family's Representative Sequence

Representative Sequence 3300048918|Ga0496115_0000831|Ga0496115_0000831_18891_20030
Length 379
Sequence VGLASGAITVIGSILYRGVAPKPKAIPLSDIEILKTADTQSLARFSAVIDVRSPAEFAEDHAPGAINLPVLTDAERAEVGTIYVQESRFRARRVGAAYVARNIARHLEGALAGEAGSFQPLVYCWRGGQRSHAMATILSQVGWRTTLLAGGYRTWRRHVTARLYDAPLPLRLVLLDGYTGSGKTEVLQRLAGLGQQVVDLEGLAAHRGSLLGALPGQPQPSQKMFESRLLAVLDGLDPARPVVVEAESSKVGERMVPPALWALMAEAPRIELVAEPAARARYLVRAYRDITLDRPALDEALRRLPTPPGRKRLEAWGQLADAGDFEALALALMELHYDPAYLRSSRKEGRRSLGVVEVGSLEPADLDAAAAEIVGRLKE

Samples

Sample ID Description Type Environment
1 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
2 2854681122 Luteovulum sphaeroides SCJ Isolate Unclassified
3 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
59 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
60 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
61 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
62 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
63 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
64 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
65 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
66 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
67 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
68 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
69 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
70 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
71 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
72 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
73 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
76 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
77 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
78 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
79 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
80 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
81 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
82 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
83 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
84 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
85 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
86 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
87 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
88 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
89 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
90 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
94 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
95 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
96 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.71
Metatranscriptomes 0
Isolates 2.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.58
Nodule 0
Rhizoplane 6.11
Rhizosphere 84.73
Stem 0
Stem Tuber 0
Unclassified 4.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10090752 3300005327 Bacteria 2517
2 Ga0070658_10135128 3300005327 Bacteria 2057
3 Ga0070670_100066583 3300005331 Bacteria 3091
4 Ga0070670_100173233 3300005331 Bacteria 1872
5 Ga0070691_10029693 3300005341 Bacteria 2559
6 Ga0070668_100021271 3300005347 Bacteria 4903
7 Ga0070671_100040599 3300005355 Bacteria 3865
8 Ga0070671_100087427 3300005355 Bacteria 2608
9 Ga0070659_100000316 3300005366 Bacteria 37463
10 Ga0070659_100004469 3300005366 Bacteria 9991
11 Ga0070667_100054428 3300005367 Bacteria 3378
12 Ga0070681_10100293 3300005458 Bacteria 2841
13 Ga0070698_100429328 3300005471 Bacteria 1256
14 Ga0070679_100022817 3300005530 Bacteria 6121
15 Ga0070679_100025696 3300005530 Bacteria 5779
16 Ga0068853_100014160 3300005539 Bacteria 6529
17 Ga0070665_100000221 3300005548 Bacteria 95402
18 Ga0068855_100032421 3300005563 Bacteria 6238
19 Ga0068855_100288930 3300005563 Bacteria 1818
20 Ga0070664_100059955 3300005564 Bacteria 3239
21 Ga0068856_100165164 3300005614 Bacteria 2225
22 Ga0068859_100109366 3300005617 Bacteria 2825
23 Ga0068859_100182219 3300005617 Bacteria 2183
24 Ga0068864_100005107 3300005618 Bacteria 10756
25 Ga0068864_100150597 3300005618 Bacteria 2107
26 Ga0068864_100164997 3300005618 Bacteria 2016
27 Ga0068860_100135604 3300005843 Bacteria 2364
28 Ga0068862_100001553 3300005844 Bacteria 20992
29 Ga0068862_100183363 3300005844 Bacteria 1880
30 Ga0068865_100024830 3300006881 Bacteria 3936
31 Ga0097620_100109371 3300006931 Bacteria 2825
32 Ga0097620_100182226 3300006931 Bacteria 2183
33 Ga0105240_10003057 3300009093 Bacteria 26302
34 Ga0105240_10062959 3300009093 Bacteria 4617
35 Ga0105240_10072849 3300009093 Bacteria 4244
36 Ga0105240_10104589 3300009093 Bacteria 3438
37 Ga0105240_10142879 3300009093 Bacteria 2860
38 Ga0105248_10000097 3300009177 Bacteria 97424
39 Ga0105238_10014697 3300009551 Bacteria 7915
40 Ga0157370_10084858 3300013104 Bacteria 2976
41 Ga0157372_10188028 3300013307 Bacteria 2391
42 Ga0157375_10025645 3300013308 Bacteria 5482
43 Ga0163163_10080758 3300014325 Bacteria 3252
44 Ga0209257_1001428 3300025304 Bacteria 28367
45 Ga0207705_10001493 3300025909 Bacteria 18593
46 Ga0207705_10052539 3300025909 Bacteria 2934
47 Ga0207707_10029811 3300025912 Bacteria 4772
48 Ga0207695_10001415 3300025913 Bacteria 40402
49 Ga0207695_10062449 3300025913 Bacteria 3845
50 Ga0207695_10065275 3300025913 Bacteria 3743
51 Ga0207695_10103405 3300025913 Bacteria 2840
52 Ga0207660_10020674 3300025917 Bacteria 4422
53 Ga0207657_10003180 3300025919 Bacteria 17567
54 Ga0207657_10084198 3300025919 Bacteria 2666
55 Ga0207652_10047808 3300025921 Bacteria 3655
56 Ga0207694_10009190 3300025924 Bacteria 7458
57 Ga0207650_10136078 3300025925 Bacteria 1927
58 Ga0207650_10173803 3300025925 Bacteria 1713
59 Ga0207644_10084295 3300025931 Bacteria 2355
60 Ga0207690_10000077 3300025932 Bacteria 85018
61 Ga0207690_10010065 3300025932 Bacteria 5617
62 Ga0207706_10017664 3300025933 Bacteria 6427
63 Ga0207704_10008051 3300025938 Bacteria 5015
64 Ga0207711_10002325 3300025941 Bacteria 17032
65 Ga0207679_10122486 3300025945 Bacteria 2073
66 Ga0207667_10073857 3300025949 Bacteria 3543
67 Ga0207712_10154996 3300025961 Bacteria 1773
68 Ga0207668_10007506 3300025972 Bacteria 6487
69 Ga0207640_10083625 3300025981 Bacteria 2189
70 Ga0207658_10023638 3300025986 Bacteria 4292
71 Ga0207703_10260687 3300026035 Bacteria 1567
72 Ga0207641_10074142 3300026088 Bacteria 2935
73 Ga0207641_10082254 3300026088 Bacteria 2797
74 Ga0207676_10049395 3300026095 Bacteria 3272
75 Ga0207675_100045312 3300026118 Bacteria 4109
76 Ga0268266_10000005 3300028379 Bacteria 1448194
77 Ga0268266_10044715 3300028379 Bacteria 3786
78 Ga0268265_10001302 3300028380 Bacteria 21394
79 Ga0307517_10017257 3300028786 Bacteria 9422
80 Ga0265338_10016989 3300028800 Bacteria 7872
81 Ga0265327_10000166 3300031251 Bacteria 141539
82 Ga0265327_10001660 3300031251 Bacteria 26802
83 Ga0307513_10006613 3300031456 Bacteria 15133
84 Ga0307413_10068671 3300031824 Bacteria 2221
85 Ga0307407_10047388 3300031903 Bacteria 2439
86 Ga0307412_10079194 3300031911 Bacteria 2266
87 Ga0307412_10316599 3300031911 Bacteria 1240
88 Ga0307414_10047761 3300032004 Bacteria 2948
89 Ga0307510_10078580 3300033180 Bacteria 3226
90 Ga0373936_0074277 3300035113 Bacteria 1406
91 Ga0373947_0121424 3300035725 Bacteria 1660
92 Ga0395899_0000223 3300037312 Bacteria 77606
93 Ga0395899_0195371 3300037312 Bacteria 1414
94 Ga0395900_0000008 3300037418 Bacteria 480459
95 Ga0395898_0013242 3300037466 Bacteria 8497
96 Ga0395905_0005561 3300037471 Bacteria 12848
97 Ga0395905_0020996 3300037471 Bacteria 6183
98 Ga0395905_0082976 3300037471 Bacteria 3003
99 Ga0436364_1002661 3300037853 Bacteria 1135
100 Ga0395901_0000008 3300038443 Bacteria 495962
101 Ga0436360_1277984 3300039438 Bacteria 3803
102 Ga0436361_0250607 3300039447 Bacteria 3191
103 Ga0436361_0312041 3300039447 Bacteria 3887
104 Ga0466964_0099121 3300044706 Bacteria 1282
105 Ga0495628_0070030 3300046516 Bacteria 2735
106 Ga0495642_0000916 3300046528 Bacteria 13845
107 Ga0495597_0003134 3300046542 Bacteria 9900
108 Ga0495668_0030741 3300046616 Bacteria 3030
109 Ga0495611_0012755 3300046648 Bacteria 3572
110 Ga0495625_0068137 3300046660 Bacteria 2502
111 Ga0495686_0020758 3300047472 Bacteria 4378
112 Ga0496103_0016699 3300048906 Bacteria 4384
113 Ga0496108_0206579 3300048911 Bacteria 1704
114 Ga0496109_0039027 3300048912 Bacteria 4297
115 Ga0496112_0039664 3300048915 Bacteria 4603
116 Ga0496112_0106834 3300048915 Bacteria 2769
117 Ga0496115_0000831 3300048918 Bacteria 22564
118 Ga0496115_0001856 3300048918 Bacteria 15115
119 Ga0496115_0084299 3300048918 Bacteria 2591
120 Ga0501037_0048320 3300049573 Bacteria 3119
121 Ga0501047_0028387 3300049581 Bacteria 5394
122 Ga0501047_0105259 3300049581 Bacteria 2702
123 Ga0501044_0009341 3300049823 Bacteria 10696
124 Ga0500643_001750 3300053087 Bacteria 11992
125 Ga0500569_002402 3300053109 Bacteria 3680
126 Ga0500595_010333 3300053119 Bacteria 3716
127 Ga0500595_033262 3300053119 Bacteria 1712
128 Ga0500645_001548 3300053730 Bacteria 11460

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009093 Ga0105240_10142879 Ga0105240_101428793 334
2 3300013307 Ga0157372_10188028 Ga0157372_101880282 334
3 3300013104 Ga0157370_10084858 Ga0157370_100848582 336
4 3300025981 Ga0207640_10083625 Ga0207640_100836252 336
5 3300048918 Ga0496115_0084299 Ga0496115_0084299_393_1409 336
6 3300037471 Ga0395905_0082976 Ga0395905_0082976_408_1511 337
7 3300035725 Ga0373947_0121424 Ga0373947_0121424_224_1315 340
8 iso_pu_bacteria 2898795034 2898795485 342
9 3300037471 Ga0395905_0020996 Ga0395905_0020996_4074_5174 345
10 iso_pu_bacteria 2854681122 2854684154 346
11 3300009093 Ga0105240_10104589 Ga0105240_101045894 347
12 3300037853 Ga0436364_1002661 Ga0436364_1002661_61_1104 347
13 3300026088 Ga0207641_10074142 Ga0207641_100741422 348
14 3300028800 Ga0265338_10016989 Ga0265338_100169893 348
15 iso_pu_bacteria 2643221663 2644353014 349
16 3300025304 Ga0209257_1001428 Ga0209257_100142817 351
17 3300033180 Ga0307510_10078580 Ga0307510_100785802 351
18 3300035113 Ga0373936_0074277 Ga0373936_0074277_158_1213 351
19 3300005327 Ga0070658_10135128 Ga0070658_101351283 352
20 3300005341 Ga0070691_10029693 Ga0070691_100296932 352
21 3300005458 Ga0070681_10100293 Ga0070681_101002932 352
22 3300005530 Ga0070679_100022817 Ga0070679_1000228172 352
23 3300005563 Ga0068855_100288930 Ga0068855_1002889303 352
24 3300006881 Ga0068865_100024830 Ga0068865_1000248304 352
25 3300009093 Ga0105240_10072849 Ga0105240_100728493 352
26 3300025909 Ga0207705_10052539 Ga0207705_100525394 352
27 3300025913 Ga0207695_10062449 Ga0207695_100624493 352
28 3300025913 Ga0207695_10065275 Ga0207695_100652753 352
29 3300025938 Ga0207704_10008051 Ga0207704_100080513 352
30 3300031251 Ga0265327_10001660 Ga0265327_100016608 352
31 3300037312 Ga0395899_0000223 Ga0395899_0000223_1603_2661 352
32 3300037312 Ga0395899_0195371 Ga0395899_0195371_77_1135 352
33 3300037418 Ga0395900_0000008 Ga0395900_0000008_172077_173135 352
34 3300037466 Ga0395898_0013242 Ga0395898_0013242_4313_5371 352
35 3300037471 Ga0395905_0005561 Ga0395905_0005561_3898_4956 352
36 3300038443 Ga0395901_0000008 Ga0395901_0000008_307331_308389 352
37 3300039438 Ga0436360_1277984 Ga0436360_1277984_2268_3329 352
38 3300048918 Ga0496115_0000831 Ga0496115_0000831_18891_20030 352
39 3300049581 Ga0501047_0105259 Ga0501047_0105259_855_1946 352
40 3300053087 Ga0500643_001750 Ga0500643_001750_5741_6799 352
41 3300053119 Ga0500595_033262 Ga0500595_033262_481_1539 352
42 3300005331 Ga0070670_100173233 Ga0070670_1001732332 353
43 3300005347 Ga0070668_100021271 Ga0070668_1000212715 353
44 3300005367 Ga0070667_100054428 Ga0070667_1000544282 353
45 3300005617 Ga0068859_100109366 Ga0068859_1001093662 353
46 3300005617 Ga0068859_100182219 Ga0068859_1001822191 353
47 3300005618 Ga0068864_100164997 Ga0068864_1001649972 353
48 3300005843 Ga0068860_100135604 Ga0068860_1001356042 353
49 3300005844 Ga0068862_100001553 Ga0068862_10000155316 353
50 3300005844 Ga0068862_100183363 Ga0068862_1001833632 353
51 3300006931 Ga0097620_100109371 Ga0097620_1001093712 353
52 3300006931 Ga0097620_100182226 Ga0097620_1001822262 353
53 3300025925 Ga0207650_10173803 Ga0207650_101738031 353
54 3300025961 Ga0207712_10154996 Ga0207712_101549962 353
55 3300025972 Ga0207668_10007506 Ga0207668_100075063 353
56 3300025986 Ga0207658_10023638 Ga0207658_100236381 353
57 3300026118 Ga0207675_100045312 Ga0207675_1000453122 353
58 3300028380 Ga0268265_10001302 Ga0268265_1000130214 353
59 3300032004 Ga0307414_10047761 Ga0307414_100477613 353
60 3300046542 Ga0495597_0003134 Ga0495597_0003134_7099_8160 353
61 3300053109 Ga0500569_002402 Ga0500569_002402_874_1935 353
62 3300005366 Ga0070659_100000316 Ga0070659_10000031634 354
63 3300005614 Ga0068856_100165164 Ga0068856_1001651642 354
64 3300009093 Ga0105240_10062959 Ga0105240_100629592 354
65 3300009177 Ga0105248_10000097 Ga0105248_1000009728 354
66 3300025913 Ga0207695_10103405 Ga0207695_101034052 354
67 3300025932 Ga0207690_10000077 Ga0207690_1000007789 354
68 3300025941 Ga0207711_10002325 Ga0207711_100023254 354
69 3300028786 Ga0307517_10017257 Ga0307517_100172576 354
70 3300031824 Ga0307413_10068671 Ga0307413_100686712 354
71 3300031903 Ga0307407_10047388 Ga0307407_100473882 354
72 3300031911 Ga0307412_10079194 Ga0307412_100791942 354
73 3300049573 Ga0501037_0048320 Ga0501037_0048320_925_2013 354
74 3300049823 Ga0501044_0009341 Ga0501044_0009341_6267_7355 354
75 3300005471 Ga0070698_100429328 Ga0070698_1004293281 355
76 3300009551 Ga0105238_10014697 Ga0105238_100146974 355
77 3300025924 Ga0207694_10009190 Ga0207694_100091904 355
78 3300028379 Ga0268266_10044715 Ga0268266_100447153 355
79 3300031911 Ga0307412_10316599 Ga0307412_103165991 355
80 3300046516 Ga0495628_0070030 Ga0495628_0070030_1079_2152 355
81 3300047472 Ga0495686_0020758 Ga0495686_0020758_409_1494 355
82 3300048915 Ga0496112_0039664 Ga0496112_0039664_814_1881 355
83 3300049581 Ga0501047_0028387 Ga0501047_0028387_1979_3070 355
84 3300053730 Ga0500645_001548 Ga0500645_001548_4763_5848 355
85 3300005327 Ga0070658_10090752 Ga0070658_100907522 356
86 3300005331 Ga0070670_100066583 Ga0070670_1000665834 356
87 3300005355 Ga0070671_100040599 Ga0070671_1000405993 356
88 3300005355 Ga0070671_100087427 Ga0070671_1000874272 356
89 3300005366 Ga0070659_100004469 Ga0070659_1000044695 356
90 3300005530 Ga0070679_100025696 Ga0070679_1000256966 356
91 3300005539 Ga0068853_100014160 Ga0068853_1000141606 356
92 3300005548 Ga0070665_100000221 Ga0070665_10000022153 356
93 3300005563 Ga0068855_100032421 Ga0068855_1000324218 356
94 3300005564 Ga0070664_100059955 Ga0070664_1000599554 356
95 3300005618 Ga0068864_100005107 Ga0068864_1000051077 356
96 3300005618 Ga0068864_100150597 Ga0068864_1001505971 356
97 3300009093 Ga0105240_10003057 Ga0105240_100030578 356
98 3300013308 Ga0157375_10025645 Ga0157375_100256455 356
99 3300014325 Ga0163163_10080758 Ga0163163_100807583 356
100 3300025909 Ga0207705_10001493 Ga0207705_1000149320 356
101 3300025912 Ga0207707_10029811 Ga0207707_100298114 356
102 3300025913 Ga0207695_10001415 Ga0207695_100014158 356
103 3300025917 Ga0207660_10020674 Ga0207660_100206744 356
104 3300025919 Ga0207657_10003180 Ga0207657_100031806 356
105 3300025919 Ga0207657_10084198 Ga0207657_100841982 356
106 3300025921 Ga0207652_10047808 Ga0207652_100478082 356
107 3300025925 Ga0207650_10136078 Ga0207650_101360784 356
108 3300025931 Ga0207644_10084295 Ga0207644_100842952 356
109 3300025932 Ga0207690_10010065 Ga0207690_100100654 356
110 3300025933 Ga0207706_10017664 Ga0207706_100176645 356
111 3300025945 Ga0207679_10122486 Ga0207679_101224864 356
112 3300025949 Ga0207667_10073857 Ga0207667_100738575 356
113 3300026035 Ga0207703_10260687 Ga0207703_102606872 356
114 3300026088 Ga0207641_10082254 Ga0207641_100822542 356
115 3300026095 Ga0207676_10049395 Ga0207676_100493953 356
116 3300028379 Ga0268266_10000005 Ga0268266_1000000552 356
117 3300031251 Ga0265327_10000166 Ga0265327_1000016632 356
118 3300031456 Ga0307513_10006613 Ga0307513_1000661314 356
119 3300039447 Ga0436361_0250607 Ga0436361_0250607_1624_2709 356
120 3300039447 Ga0436361_0312041 Ga0436361_0312041_2621_3706 356
121 3300044706 Ga0466964_0099121 Ga0466964_0099121_115_1191 356
122 3300046528 Ga0495642_0000916 Ga0495642_0000916_53_1126 356
123 3300046616 Ga0495668_0030741 Ga0495668_0030741_1518_2591 356
124 3300046648 Ga0495611_0012755 Ga0495611_0012755_739_1812 356
125 3300046660 Ga0495625_0068137 Ga0495625_0068137_767_1840 356
126 3300048906 Ga0496103_0016699 Ga0496103_0016699_449_1522 356
127 3300048911 Ga0496108_0206579 Ga0496108_0206579_281_1354 356
128 3300048912 Ga0496109_0039027 Ga0496109_0039027_1019_2092 356
129 3300048915 Ga0496112_0106834 Ga0496112_0106834_637_1710 356
130 3300048918 Ga0496115_0001856 Ga0496115_0001856_12221_13291 356
131 3300053119 Ga0500595_010333 Ga0500595_010333_2139_3212 356

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00581

Rhodanese

Rhodanese-like domain

32

158

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hix-assembly3.cif.gz_C crystal structure of the rhodanese_3 like domain from anabaena sp alr3790 protein. northeast structural genomics consortium target nsr437i 0.8299 18 131
4ocg-assembly1.cif.gz_A structure of the shewanella loihica pv-4 nadh-dependent persulfide reductase f161a mutant 0.8248 4 129
3nta-assembly1.cif.gz_B structure of the shewanella loihica pv-4 nadh-dependent persulfide reductase 0.8242 4 129
8a56-assembly1.cif.gz_A coenzyme a-persulfide reductase (coapr) from enterococcus faecalis 0.8086 4 129
8a56-assembly1.cif.gz_B coenzyme a-persulfide reductase (coapr) from enterococcus faecalis 0.8023 4 129
ID Description Score Start End Superfamily
af_Q60359_91_222_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8924 13 132 3.40.250.10
af_Q2FY36_20_124_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8642 4 128 3.40.250.10
3hixC00 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8182 20 131 3.40.250.10
af_Q60359_91_222_3.40.250.10 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8109 13 132 3.40.250.10
af_Q60360_6_175_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8105 142 300 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A838JKT2-F1-model_v4 tRNA 2-selenouridine(34) synthase MnmH 0.9938 18 96 GO:0002098
GO:0043828
AF-G5J3S5-F1-model_v4 Selenophosphate-dependent tRNA 2-selenouridine synthase 0.9892 19 130 GO:0002098
GO:0004792
GO:0043828
AF-A0A537BTA3-F1-model_v4 tRNA 2-selenouridine(34) synthase MnmH 0.986 10 115 GO:0002098
GO:0043828
AF-A0A537FTK1-F1-model_v4 tRNA 2-selenouridine(34) synthase MnmH 0.9792 9 136 GO:0002098
GO:0043828
AF-A0A258B886-F1-model_v4 tRNA 2-selenouridine(34) synthase MnmH 0.9743 12 136 GO:0002098
GO:0004792
GO:0043828

Feature Viewer

pLDDT pTM Quality
92.22 0.89 High
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Predicted Structure (AlphaFold2)

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