F148457

General Info

Members Datasets Scaffolds Average Seq Length
131 94 262 645

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100040944|Ga0070698_1000409442
Length 742
Sequence MVSSYINKETLIRIAWQGMKRSAPLLDVRKAYDFGTYVSFSLPRLCLNLATRRRSLLSNSRGVSRKGRAFPHSGRPSRRTLPDLNRRYSNKLWRDLFIFLLVASLVLPIVTSIAQDQRELEAEKIKSNKLKGEHPLFELMRSRKSSLRPELMSVHPRVYVTDKELDQLRQRARTTHRDLWQKALQKVRALKTEPAAPPAQQRRAQNEVGIGIAEAAFAYKIEGDRKYDIWGYANDKPNVDLAAGHLLYGLGWGYDLLYHDLSEPDRTRYRDKLIKQARLLADYFKPKPGRTFAYSQNHVFIPITGLGVVGYALYDETPEAADWAKLARAFYDRVLATYSHDGYYYEGFEYWIFATPWLVHYLDAQAHAAGEDLYDLPGFREMHKYVAHAMLPSGQYVFDFGDVFEGPLTRAGKGEEVKRTHPGGHFHTNYNLLYRLAQRFRSGEAQGVADWLKGFNQVNAEDFWSLVWYDPAVKAVPIARQETSHYFPDHDVFYWRSDWTRNATAFAFKCGPPEGHHTKRLLEEFPDWRLSSGHAHPDANSFIIFARGKYLTGDTGYAGVPMTQHHNTLLINGKGQAKEGDGHDAFADVPYERLDRVRIVSVKAERGSVLLRGDATAAYEPDLGVRKFVREFEYKPAAGFYIRDEVETTKPAVITSLIHADERVEADSGNRFAIKANGVKLLIEPLEPKGIRSAIESNILTAPGPPGAVDKGERQERGQKLLLSTSQPTTAVRFLIRLRILP

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
3 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
4 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
78 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
82 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
86 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
87 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
88 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
89 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
90 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
91 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
92 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
93 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
94 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.76
Nodule 0
Rhizoplane 0.76
Rhizosphere 95.42
Stem 0
Stem Tuber 0
Unclassified 16.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100040944 3300005471 Bacteria 4759
2 CNAas_1000327 3300000532 Unclassified 4574
3 JGI24748J21848_1000027 3300002074 Bacteria 93866
4 JGI24034J26672_10000009 3300002239 Bacteria 160533
5 JGI24034J26672_10000029 3300002239 Bacteria 101926
6 Ga0065715_10096692 3300005293 Unclassified 3839
7 Ga0065707_10093257 3300005295 Bacteria 3631
8 Ga0070670_100010513 3300005331 Bacteria 7902
9 Ga0068869_100018782 3300005334 Bacteria 4713
10 Ga0068869_100044000 3300005334 Bacteria 3209
11 Ga0068869_100061679 3300005334 Unclassified 2751
12 Ga0068869_100083533 3300005334 Bacteria 2389
13 Ga0070668_100013207 3300005347 Bacteria 6160
14 Ga0070671_100004007 3300005355 Bacteria 11603
15 Ga0070673_100100393 3300005364 Bacteria 2382
16 Ga0070703_10000356 3300005406 Bacteria 19880
17 Ga0070694_100001725 3300005444 Bacteria 12883
18 Ga0070694_100042052 3300005444 Bacteria 3051
19 Ga0070681_10004095 3300005458 Bacteria 13779
20 Ga0070681_10064084 3300005458 Unclassified 3647
21 Ga0070706_100021021 3300005467 Bacteria 6008
22 Ga0070707_100000357 3300005468 Bacteria 44868
23 Ga0070707_100001036 3300005468 Bacteria 27537
24 Ga0070707_100007956 3300005468 Bacteria 9845
25 Ga0070707_100040481 3300005468 Bacteria 4459
26 Ga0070707_100103381 3300005468 Bacteria 2760
27 Ga0070698_100012346 3300005471 Bacteria 9045
28 Ga0070698_100061960 3300005471 Unclassified 3774
29 Ga0070699_100060401 3300005518 Bacteria 3285
30 Ga0070699_100119935 3300005518 Bacteria 2312
31 Ga0070697_100000082 3300005536 Bacteria 77550
32 Ga0070697_100000157 3300005536 Bacteria 55346
33 Ga0068853_100016682 3300005539 Bacteria 6048
34 Ga0068853_100067770 3300005539 Bacteria 3101
35 Ga0070704_100004009 3300005549 Bacteria 8500
36 Ga0070704_100040299 3300005549 Bacteria 3214
37 Ga0070664_100004419 3300005564 Bacteria 11296
38 Ga0070664_100022549 3300005564 Bacteria 5192
39 Ga0068857_100013758 3300005577 Bacteria 7050
40 Ga0068857_100029816 3300005577 Unclassified 4814
41 Ga0068859_100008407 3300005617 Bacteria 10459
42 Ga0068859_100068369 3300005617 Bacteria 3587
43 Ga0068864_100025869 3300005618 Unclassified 4945
44 Ga0068858_100010239 3300005842 Bacteria 8897
45 Ga0068860_100009938 3300005843 Bacteria 9430
46 Ga0068862_100019797 3300005844 Bacteria 5621
47 Ga0068862_100021858 3300005844 Bacteria 5349
48 Ga0081540_1021008 3300005983 Unclassified 3905
49 Ga0081539_10043248 3300005985 Unclassified 2613
50 Ga0097621_100042627 3300006237 Bacteria 3656
51 Ga0075431_100008708 3300006847 Bacteria 10166
52 Ga0075429_100027370 3300006880 Unclassified 4948
53 Ga0097620_100008407 3300006931 Bacteria 10459
54 Ga0097620_100068368 3300006931 Bacteria 3587
55 Ga0111539_10012661 3300009094 Bacteria 10567
56 Ga0111539_10063476 3300009094 Unclassified 4371
57 Ga0111539_10080353 3300009094 Bacteria 3835
58 Ga0105245_10008226 3300009098 Bacteria 9116
59 Ga0105247_10000039 3300009101 Bacteria 160675
60 Ga0114129_10008951 3300009147 Bacteria 14267
61 Ga0105243_10000187 3300009148 Bacteria 72048
62 Ga0105243_10000628 3300009148 Bacteria 35191
63 Ga0105242_10000008 3300009176 Bacteria 172348
64 Ga0105242_10000204 3300009176 Bacteria 46259
65 Ga0105237_10102948 3300009545 Unclassified 2847
66 Ga0105249_10000113 3300009553 Bacteria 108613
67 Ga0105246_10006141 3300011119 Bacteria 7330
68 Ga0157373_10025509 3300013100 Unclassified 4275
69 Ga0157369_10071104 3300013105 Unclassified 3737
70 Ga0157378_10012487 3300013297 Bacteria 7437
71 Ga0157378_10050686 3300013297 Unclassified 3694
72 Ga0163162_10000023 3300013306 Bacteria 193395
73 Ga0163162_10044200 3300013306 Bacteria 4461
74 Ga0163162_10044908 3300013306 Unclassified 4427
75 Ga0157372_10016668 3300013307 Bacteria 7886
76 Ga0157375_10011320 3300013308 Bacteria 7878
77 Ga0163163_10018793 3300014325 Bacteria 6479
78 Ga0163163_10019949 3300014325 Bacteria 6306
79 Ga0157380_10020839 3300014326 Bacteria 4907
80 Ga0157376_10024531 3300014969 Bacteria 4737
81 Ga0213876_10000317 3300021384 Bacteria 42312
82 Ga0207672_1000190 3300025223 Bacteria 8596
83 Ga0207653_10000121 3300025885 Bacteria 55532
84 Ga0207710_10000001 3300025900 Bacteria 1797433
85 Ga0207643_10022903 3300025908 Bacteria 3442
86 Ga0207684_10042429 3300025910 Bacteria 3856
87 Ga0207707_10029731 3300025912 Unclassified 4778
88 Ga0207657_10021569 3300025919 Bacteria 6058
89 Ga0207649_10028866 3300025920 Unclassified 3270
90 Ga0207646_10001610 3300025922 Bacteria 27542
91 Ga0207646_10019940 3300025922 Bacteria 6221
92 Ga0207646_10040529 3300025922 Bacteria 4187
93 Ga0207650_10012919 3300025925 Bacteria 5772
94 Ga0207690_10004094 3300025932 Bacteria 8607
95 Ga0207686_10000023 3300025934 Bacteria 172422
96 Ga0207686_10022341 3300025934 Bacteria 3643
97 Ga0207709_10000062 3300025935 Bacteria 194534
98 Ga0207709_10003675 3300025935 Bacteria 9030
99 Ga0207711_10034377 3300025941 Bacteria 4293
100 Ga0207689_10027033 3300025942 Bacteria 4803
101 Ga0207689_10083647 3300025942 Unclassified 2624
102 Ga0207679_10004441 3300025945 Bacteria 8738
103 Ga0207712_10000216 3300025961 Bacteria 57333
104 Ga0207668_10024820 3300025972 Bacteria 3873
105 Ga0207639_10062092 3300026041 Bacteria 2888
106 Ga0207708_10010666 3300026075 Bacteria 6825
107 Ga0207674_10000666 3300026116 Bacteria 44694
108 Ga0207674_10014070 3300026116 Bacteria 8840
109 Ga0207675_100009053 3300026118 Bacteria 9344
110 Ga0207675_100013676 3300026118 Bacteria 7573
111 Ga0207428_10004541 3300027907 Bacteria 13160
112 Ga0207428_10010879 3300027907 Bacteria 8101
113 Ga0268264_10009890 3300028381 Bacteria 7895
114 Ga0307513_10100447 3300031456 Bacteria 2919
115 Ga0307405_10005335 3300031731 Bacteria 6189
116 Ga0307410_10003509 3300031852 Bacteria 7877
117 Ga0307414_10015299 3300032004 Bacteria 4630
118 Ga0307411_10004656 3300032005 Bacteria 6610
119 Ga0307507_10089402 3300033179 Bacteria 2650
120 Ga0395905_0042771 3300037471 Bacteria 4250
121 Ga0395901_0136885 3300038443 Unclassified 2574
122 Ga0436365_0576586 3300039437 Bacteria 106320
123 Ga0495663_0000362 3300046525 Bacteria 16911
124 Ga0495668_0001163 3300046616 Bacteria 26805
125 Ga0496106_0008507 3300048909 Bacteria 7590
126 nmdc:mga05p37_10612_c1 3300050507 Bacteria 10928
127 nmdc:mga09592_88906_c1 3300050508 Unclassified 2638
128 nmdc:mga06r32_90367_c1 3300050510 Bacteria 2991
129 nmdc:mga08y16_38787_c1 3300050511 Bacteria 5000
130 Ga0495655_0006003 3300053083 Bacteria 2181
131 Ga0500616_0002438 3300053153 Bacteria 15481
132 Ga0070698_100040944
133 CNAas_1000327
134 JGI24748J21848_1000027
135 JGI24034J26672_10000009
136 JGI24034J26672_10000029
137 Ga0065715_10096692
138 Ga0065707_10093257
139 Ga0070670_100010513
140 Ga0068869_100018782
141 Ga0068869_100044000
142 Ga0068869_100061679
143 Ga0068869_100083533
144 Ga0070668_100013207
145 Ga0070671_100004007
146 Ga0070673_100100393
147 Ga0070703_10000356
148 Ga0070694_100001725
149 Ga0070694_100042052
150 Ga0070681_10004095
151 Ga0070681_10064084
152 Ga0070706_100021021
153 Ga0070707_100000357
154 Ga0070707_100001036
155 Ga0070707_100007956
156 Ga0070707_100040481
157 Ga0070707_100103381
158 Ga0070698_100012346
159 Ga0070698_100061960
160 Ga0070699_100060401
161 Ga0070699_100119935
162 Ga0070697_100000082
163 Ga0070697_100000157
164 Ga0068853_100016682
165 Ga0068853_100067770
166 Ga0070704_100004009
167 Ga0070704_100040299
168 Ga0070664_100004419
169 Ga0070664_100022549
170 Ga0068857_100013758
171 Ga0068857_100029816
172 Ga0068859_100008407
173 Ga0068859_100068369
174 Ga0068864_100025869
175 Ga0068858_100010239
176 Ga0068860_100009938
177 Ga0068862_100019797
178 Ga0068862_100021858
179 Ga0081540_1021008
180 Ga0081539_10043248
181 Ga0097621_100042627
182 Ga0075431_100008708
183 Ga0075429_100027370
184 Ga0097620_100008407
185 Ga0097620_100068368
186 Ga0111539_10012661
187 Ga0111539_10063476
188 Ga0111539_10080353
189 Ga0105245_10008226
190 Ga0105247_10000039
191 Ga0114129_10008951
192 Ga0105243_10000187
193 Ga0105243_10000628
194 Ga0105242_10000008
195 Ga0105242_10000204
196 Ga0105237_10102948
197 Ga0105249_10000113
198 Ga0105246_10006141
199 Ga0157373_10025509
200 Ga0157369_10071104
201 Ga0157378_10012487
202 Ga0157378_10050686
203 Ga0163162_10000023
204 Ga0163162_10044200
205 Ga0163162_10044908
206 Ga0157372_10016668
207 Ga0157375_10011320
208 Ga0163163_10018793
209 Ga0163163_10019949
210 Ga0157380_10020839
211 Ga0157376_10024531
212 Ga0213876_10000317
213 Ga0207672_1000190
214 Ga0207653_10000121
215 Ga0207710_10000001
216 Ga0207643_10022903
217 Ga0207684_10042429
218 Ga0207707_10029731
219 Ga0207657_10021569
220 Ga0207649_10028866
221 Ga0207646_10001610
222 Ga0207646_10019940
223 Ga0207646_10040529
224 Ga0207650_10012919
225 Ga0207690_10004094
226 Ga0207686_10000023
227 Ga0207686_10022341
228 Ga0207709_10000062
229 Ga0207709_10003675
230 Ga0207711_10034377
231 Ga0207689_10027033
232 Ga0207689_10083647
233 Ga0207679_10004441
234 Ga0207712_10000216
235 Ga0207668_10024820
236 Ga0207639_10062092
237 Ga0207708_10010666
238 Ga0207674_10000666
239 Ga0207674_10014070
240 Ga0207675_100009053
241 Ga0207675_100013676
242 Ga0207428_10004541
243 Ga0207428_10010879
244 Ga0268264_10009890
245 Ga0307513_10100447
246 Ga0307405_10005335
247 Ga0307410_10003509
248 Ga0307414_10015299
249 Ga0307411_10004656
250 Ga0307507_10089402
251 Ga0395905_0042771
252 Ga0395901_0136885
253 Ga0436365_0576586
254 Ga0495663_0000362
255 Ga0495668_0001163
256 Ga0496106_0008507
257 nmdc:mga05p37_10612_c1
258 nmdc:mga09592_88906_c1
259 nmdc:mga06r32_90367_c1
260 nmdc:mga08y16_38787_c1
261 Ga0495655_0006003
262 Ga0500616_0002438

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16332

DUF4962

Domain of unknown function (DUF4962)

218

414

0.88

PF07940

Hepar_II_III

Heparinase II/III-like protein

479

697

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6hzn-assembly1.cif.gz_A crystal structure of human dermatan sulfate epimerase 1 0.742 32 663
4ok4-assembly1.cif.gz_B crystal structure of alg17c mutant h202l 0.7245 62 661
3a0o-assembly2.cif.gz_B crystal structure of alginate lyase from agrobacterium tumefaciens c58 0.7214 45 664
3afl-assembly1.cif.gz_A crystal structure of exotype alginate lyase atu3025 h531a complexed with alginate trisaccharide 0.7141 45 664
5dgr-assembly1.cif.gz_A crystal structure of gh9 exo-beta-d-glucosaminidase pbpra0520, glucosamine complex 0.7018 114 256
ID Description Score Start End Superfamily
af_Q9UL01_40_379_1.50.10.100 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase;Chondroitin AC/alginate lyase 0.8017 62 395 1.50.10.100
af_Q9UL01_40_379_1.50.10.100 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase;Chondroitin AC/alginate lyase 0.7863 62 395 1.50.10.100
af_Q8IZU8_408_713_2.70.98.70 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.7781 405 659 2.70.98.70
4mmiA02 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.7519 405 663 2.70.98.70
5jmfA02 Mainly Beta;Distorted Sandwich;Beta-galactosidase; Chain A, domain 5; 0.7501 404 665 2.70.98.70
ID Description Score Start End GO Terms
AF-A0A844DHE3-F1-model_v4 DUF4962 domain-containing protein 0.9689 33 660 GO:0016020
GO:0030204
GO:0030205
GO:0047757
AF-A0A2V8PAW2-F1-model_v4 Heparinase II N-terminal domain-containing protein 0.9672 23 421 GO:0016020
GO:0030204
GO:0030205
GO:0047757
AF-A0A2V8P4L4-F1-model_v4 Heparinase II/III-like C-terminal domain-containing protein 0.9582 420 663 GO:0016829
AF-A0A2V8P4L4-F1-model_v4 Heparinase II/III-like C-terminal domain-containing protein 0.9544 420 663 GO:0016829
AF-A0A1Q7NJD9-F1-model_v4 Heparinase II N-terminal domain-containing protein 0.9514 5 530 GO:0016020
GO:0016853

Map