F143354

General Info

Members Datasets Scaffolds Average Seq Length
129 103 112 728

Family's Representative Sequence

Representative Sequence 3300049823|Ga0501044_0116584|Ga0501044_0116584_163_2598
Length 811
Sequence MKDNGTVIIPLSGVDSEHCALIVDKGLNKVEGINSHKIELNNKRAVINTNGNIQVLPQAVKTIRDLGYDVDTVKKSFPVLNMSCASCAASSQSILENIPGVINVAVNYANATALVEYIPTVTNPQQLKTALQSVGYDLMIDESEEAKDALEDLQAEKFKSLKNKTYGAIVLSIPLVIIGMFFMNLPTGQTGLPYANYIMWALATPVVFIFGKQFFANAWKQLKHRSANMDTLVAMSTGIAYLFSVFNIIYPQFWLSRGITPHVYFEAAGVVIAFILLGKLLEEKAKGHTSSAIKKLMGLQPQNVTVVHEGGHQMEVKIVNVKVGDTILVRPGEKIPVDGKVISGNSFVDESMISGEPIPVEKINGEKVFAGTINQKGSFQFVAEKVGGDTVLAHIIKMVQEAQGSKAPVQKLVDKIAAIFVPAVIVIAILSMIIWIIFGGYNGLTHGLLALVTVLIIACPCALGLATPTAIMAGIGKGAENGILIKDAESLELSKKINTVILDKTGTITEGKPVVTDVLWINNNQQYLPHLVSIEKQSEHPLAEAVTNYFDEKNYLPVHHFESITGLGAKATIDGKSFYIGNYSLLKANKISIDDSLKPVSEKWLNEAKTVIYFSDEMQALAVIAIADTIKETSKEAVRQLQNEGIEVYMLTGDNATTAKAISEETGIKNFKAEVLPEHKANFVKELQQHGKVVAMVGDGINDSTALAQADVSIAMGQGSDIAMDVAKMTIISSDLLKIPKAIRLSRYTVGTIRQNLFWAFIYNVIGIPIAAGILFPINGFLLNPMIAGSAMALSSVSVVSNSLRLKGRKL

Samples

Sample ID Description Type Environment
1 2738541283 Pedobacter sp. OK701 Isolate Unclassified
2 2738543023 Pedobacter sp. OK628 Isolate Unclassified
3 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
4 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
5 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
6 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
7 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
8 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
9 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
10 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
11 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
12 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
13 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
14 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
15 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
16 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
17 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
18 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
19 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
20 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
21 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
22 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
23 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
24 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
25 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
48 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
49 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
50 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
52 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
71 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
72 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
75 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
76 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
77 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
78 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
81 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
82 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
83 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
84 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
85 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
86 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
87 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
90 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
91 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
92 3300049680 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought Metagenome Rhizosphere
93 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
94 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
95 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
96 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
99 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
100 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
101 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
102 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
103 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.82
Metatranscriptomes 0
Isolates 13.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.2
Nodule 0
Rhizoplane 0
Rhizosphere 82.17
Stem 0
Stem Tuber 0
Unclassified 11.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10072792 3300003316 Bacteria 7334
2 rootH2_10006458 3300003320 Bacteria 43676
3 rootL2_10187534 3300003322 Bacteria 4023
4 rootL2_10189726 3300003322 Bacteria 3485
5 rootH1_10003221 3300003323 Bacteria 38731
6 Ga0065714_10003066 3300005288 Bacteria 17884
7 Ga0065704_10002408 3300005289 Bacteria 5290
8 Ga0065704_10082062 3300005289 Bacteria 3649
9 Ga0070676_10000572 3300005328 Bacteria 17865
10 Ga0070683_100072975 3300005329 Bacteria 3205
11 Ga0068868_100024898 3300005338 Bacteria 4545
12 Ga0070673_100001200 3300005364 Bacteria 14938
13 Ga0070663_100026836 3300005455 Bacteria 3904
14 Ga0070678_100002564 3300005456 Bacteria 9977
15 Ga0068867_100003352 3300005459 Bacteria 11281
16 Ga0068853_100018474 3300005539 Bacteria 5772
17 Ga0068855_100044349 3300005563 Bacteria 5263
18 Ga0068855_100131087 3300005563 Bacteria 2863
19 Ga0068852_100000632 3300005616 Bacteria 22995
20 Ga0097621_100000453 3300006237 Bacteria 28724
21 Ga0068871_100001202 3300006358 Bacteria 17275
22 Ga0068865_100000025 3300006881 Bacteria 94590
23 Ga0105240_10000520 3300009093 Bacteria 70859
24 Ga0105240_10001726 3300009093 Bacteria 36894
25 Ga0114129_10000185 3300009147 Bacteria 69732
26 Ga0105243_10000007 3300009148 Bacteria 445042
27 Ga0105241_10000254 3300009174 Bacteria 40113
28 Ga0105237_10002536 3300009545 Bacteria 22605
29 Ga0105237_10002617 3300009545 Bacteria 22167
30 Ga0105237_10005937 3300009545 Bacteria 13692
31 Ga0105237_10006426 3300009545 Bacteria 13040
32 Ga0105238_10008083 3300009551 Bacteria 10522
33 Ga0105239_10002214 3300010375 Bacteria 24975
34 Ga0157371_10002524 3300013102 Bacteria 17385
35 Ga0157371_10002528 3300013102 Bacteria 17364
36 Ga0157371_10028925 3300013102 Bacteria 4012
37 Ga0157371_10035022 3300013102 Bacteria 3599
38 Ga0157370_10000132 3300013104 Bacteria 89678
39 Ga0157370_10013898 3300013104 Bacteria 8266
40 Ga0157369_10082668 3300013105 Bacteria 3436
41 Ga0157374_10007857 3300013296 Bacteria 9107
42 Ga0157372_10106808 3300013307 Bacteria 3202
43 Ga0182008_10000009 3300014497 Bacteria 331416
44 Ga0182008_10000614 3300014497 Bacteria 26183
45 Ga0182008_10015792 3300014497 Bacteria 3934
46 Ga0182006_1000521 3300015261 Bacteria 29292
47 Ga0163161_10000705 3300017792 Bacteria 26566
48 Ga0209258_100036 3300025242 Bacteria 428859
49 Ga0209026_1000709 3300025250 Bacteria 19750
50 Ga0209148_1000246 3300025254 Bacteria 86586
51 Ga0207426_1000139 3300025302 Bacteria 195835
52 Ga0207680_10003567 3300025903 Bacteria 7321
53 Ga0207645_10008102 3300025907 Bacteria 7364
54 Ga0207705_10002206 3300025909 Bacteria 15054
55 Ga0207695_10002228 3300025913 Bacteria 29088
56 Ga0207671_10004282 3300025914 Bacteria 13732
57 Ga0207657_10017753 3300025919 Bacteria 6813
58 Ga0207652_10003152 3300025921 Bacteria 13740
59 Ga0207709_10000033 3300025935 Bacteria 320483
60 Ga0207704_10000016 3300025938 Bacteria 158362
61 Ga0207639_10006402 3300026041 Bacteria 7998
62 Ga0207678_10074097 3300026067 Bacteria 2917
63 Ga0207648_10000331 3300026089 Bacteria 51769
64 Ga0207683_10007868 3300026121 Bacteria 9120
65 Ga0207698_10001743 3300026142 Bacteria 12686
66 Ga0307515_10000203 3300028794 Bacteria 145242
67 Ga0265338_10007245 3300028800 Bacteria 13848
68 Ga0307511_10000367 3300030521 Bacteria 48024
69 Ga0316183_1029383 3300030742 Bacteria 39783
70 Ga0316181_1068791 3300030744 Bacteria 41630
71 Ga0265327_10034002 3300031251 Bacteria 2834
72 Ga0307513_10060259 3300031456 Bacteria 4024
73 Ga0307405_10020536 3300031731 Bacteria 3693
74 Ga0307414_10024608 3300032004 Bacteria 3843
75 Ga0395899_0004403 3300037312 Bacteria 10985
76 Ga0395900_0010728 3300037418 Bacteria 9371
77 Ga0395901_0061412 3300038443 Bacteria 3910
78 Ga0439449_0016218 3300042007 Bacteria 2801
79 Ga0451577_0000010 3300042876 Bacteria 616686
80 Ga0466972_0000002 3300044658 Bacteria 408005
81 Ga0466972_0007291 3300044658 Bacteria 5551
82 Ga0453683_0000031 3300044673 Bacteria 241998
83 Ga0453683_0001482 3300044673 Bacteria 20102
84 Ga0453683_0014626 3300044673 Bacteria 5092
85 Ga0453684_0000191 3300044712 Bacteria 267816
86 Ga0453684_0042762 3300044712 Bacteria 6102
87 Ga0453684_0115627 3300044712 Bacteria 3250
88 Ga0466968_0003625 3300044735 Bacteria 5720
89 Ga0466970_0003796 3300044765 Bacteria 7395
90 Ga0466957_0019637 3300044842 Bacteria 3975
91 Ga0451576_0000002 3300045051 Bacteria 1670975
92 Ga0451576_0000057 3300045051 Bacteria 300798
93 Ga0451576_0002070 3300045051 Bacteria 31440
94 Ga0451576_0004047 3300045051 Bacteria 19441
95 Ga0451576_0032357 3300045051 Bacteria 5570
96 Ga0451576_0068693 3300045051 Bacteria 3687
97 Ga0496122_0007946 3300048925 Bacteria 11605
98 Ga0496123_0003263 3300048926 Bacteria 18398
99 Ga0501223_000898 3300049663 Bacteria 7051
100 Ga0501250_000702 3300049680 Bacteria 2416
101 Ga0501257_000492 3300049686 Bacteria 7853
102 Ga0501225_0005885 3300049705 Bacteria 3589
103 Ga0501241_000703 3300049758 Bacteria 7208
104 Ga0501264_000129 3300049761 Bacteria 11724
105 Ga0501044_0116584 3300049823 Bacteria 2676
106 Ga0501284_00011 3300050005 Bacteria 131008
107 nmdc:mga05p37_334_c1 3300050507 Bacteria 50674
108 Ga0500622_0000024 3300053156 Bacteria 249623
109 Ga0500622_0000027 3300053156 Bacteria 232414
110 Ga0500622_0001810 3300053156 Bacteria 16284
111 Ga0500633_0001705 3300053160 Bacteria 4266
112 Ga0500636_0022090 3300053177 Bacteria 3765

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049758 Ga0501241_000703 Ga0501241_000703_3959_6190 657
2 3300044735 Ga0466968_0003625 Ga0466968_0003625_3630_5699 662
3 3300006881 Ga0068865_100000025 Ga0068865_10000002540 666
4 3300025938 Ga0207704_10000016 Ga0207704_1000001622 666
5 3300045051 Ga0451576_0000057 Ga0451576_0000057_200309_202441 668
6 3300045051 Ga0451576_0002070 Ga0451576_0002070_21763_23901 672
7 3300045051 Ga0451576_0068693 Ga0451576_0068693_60_2219 672
8 3300005328 Ga0070676_10000572 Ga0070676_100005722 674
9 3300005338 Ga0068868_100024898 Ga0068868_1000248983 674
10 3300005456 Ga0070678_100002564 Ga0070678_1000025643 674
11 3300005459 Ga0068867_100003352 Ga0068867_1000033525 674
12 3300006237 Ga0097621_100000453 Ga0097621_10000045320 674
13 3300006358 Ga0068871_100001202 Ga0068871_10000120213 674
14 3300026089 Ga0207648_10000331 Ga0207648_1000033126 674
15 3300026121 Ga0207683_10007868 Ga0207683_100078682 674
16 3300005364 Ga0070673_100001200 Ga0070673_10000120012 675
17 3300005616 Ga0068852_100000632 Ga0068852_10000063213 675
18 3300025907 Ga0207645_10008102 Ga0207645_100081024 675
19 3300049680 Ga0501250_000702 Ga0501250_000702_270_2387 679
20 3300025903 Ga0207680_10003567 Ga0207680_100035674 680
21 3300013102 Ga0157371_10035022 Ga0157371_100350222 685
22 3300053177 Ga0500636_0022090 Ga0500636_0022090_184_2376 686
23 3300013105 Ga0157369_10082668 Ga0157369_100826681 687
24 3300044712 Ga0453684_0115627 Ga0453684_0115627_741_2885 687
25 3300053156 Ga0500622_0001810 Ga0500622_0001810_782_2923 687
26 3300031251 Ga0265327_10034002 Ga0265327_100340023 688
27 3300026067 Ga0207678_10074097 Ga0207678_100740971 689
28 3300009093 Ga0105240_10001726 Ga0105240_1000172626 691
29 3300030521 Ga0307511_10000367 Ga0307511_1000036725 691
30 3300044673 Ga0453683_0001482 Ga0453683_0001482_11678_13897 692
31 3300025913 Ga0207695_10002228 Ga0207695_100022285 696
32 3300025914 Ga0207671_10004282 Ga0207671_100042825 696
33 3300009545 Ga0105237_10005937 Ga0105237_1000593710 697
34 3300013104 Ga0157370_10000132 Ga0157370_1000013226 697
35 3300014497 Ga0182008_10000614 Ga0182008_100006147 697
36 3300015261 Ga0182006_1000521 Ga0182006_100052115 697
37 3300017792 Ga0163161_10000705 Ga0163161_1000070511 697
38 3300048926 Ga0496123_0003263 Ga0496123_0003263_12516_14750 697
39 iso_pu_bacteria 3003233435 3003235286 697
40 3300025250 Ga0209026_1000709 Ga0209026_100070912 700
41 3300025242 Ga0209258_100036 Ga0209258_100036335 701
42 3300025254 Ga0209148_1000246 Ga0209148_100024629 701
43 3300048925 Ga0496122_0007946 Ga0496122_0007946_8642_10912 701
44 iso_pu_bacteria 2890804823 2890806738 703
45 3300005539 Ga0068853_100018474 Ga0068853_1000184742 704
46 3300010375 Ga0105239_10002214 Ga0105239_1000221425 704
47 3300013296 Ga0157374_10007857 Ga0157374_100078577 704
48 3300026041 Ga0207639_10006402 Ga0207639_100064026 704
49 3300009545 Ga0105237_10002617 Ga0105237_1000261711 705
50 3300009093 Ga0105240_10000520 Ga0105240_1000052041 706
51 3300009174 Ga0105241_10000254 Ga0105241_1000025425 706
52 3300009545 Ga0105237_10006426 Ga0105237_100064264 706
53 3300009551 Ga0105238_10008083 Ga0105238_100080832 706
54 3300030742 Ga0316183_1029383 Ga0316183_102938328 706
55 3300030744 Ga0316181_1068791 Ga0316181_106879123 706
56 3300053160 Ga0500633_0001705 Ga0500633_0001705_840_3041 707
57 3300025302 Ga0207426_1000139 Ga0207426_1000139161 708
58 iso_pu_bacteria 2896344016 2896345561 708
59 iso_pu_bacteria 2919186247 2919189831 708
60 iso_pu_bacteria 2939664404 2939668109 708
61 iso_pu_bacteria 2852627209 2852630103 709
62 3300028794 Ga0307515_10000203 Ga0307515_1000020371 710
63 3300053156 Ga0500622_0000024 Ga0500622_0000024_24782_27025 710
64 iso_pu_bacteria 2738543023 2739300660 710
65 iso_pu_bacteria 2852623160 2852624217 711
66 3300028800 Ga0265338_10007245 Ga0265338_100072452 712
67 3300042876 Ga0451577_0000010 Ga0451577_0000010_353039_355261 712
68 3300044658 Ga0466972_0007291 Ga0466972_0007291_2803_5019 712
69 3300044673 Ga0453683_0000031 Ga0453683_0000031_4778_7006 712
70 3300044712 Ga0453684_0000191 Ga0453684_0000191_261426_263648 712
71 3300044712 Ga0453684_0042762 Ga0453684_0042762_2527_4755 712
72 3300045051 Ga0451576_0004047 Ga0451576_0004047_5223_7445 712
73 3300049705 Ga0501225_0005885 Ga0501225_0005885_283_2499 712
74 iso_pu_bacteria 2738541283 2738757715 712
75 iso_pu_bacteria 2898713307 2898716420 712
76 3300003322 rootL2_10189726 rootL2_101897261 713
77 3300005288 Ga0065714_10003066 Ga0065714_100030661 713
78 3300014497 Ga0182008_10000009 Ga0182008_1000000940 713
79 3300014497 Ga0182008_10015792 Ga0182008_100157921 713
80 iso_pu_bacteria 2929154850 2929155747 713
81 3300031731 Ga0307405_10020536 Ga0307405_100205362 714
82 3300049663 Ga0501223_000898 Ga0501223_000898_2369_4648 714
83 3300050005 Ga0501284_00011 Ga0501284_00011_17790_20024 716
84 3300013104 Ga0157370_10013898 Ga0157370_100138987 718
85 3300003320 rootH2_10006458 rootH2_100064587 719
86 3300013102 Ga0157371_10002524 Ga0157371_100025242 719
87 3300049761 Ga0501264_000129 Ga0501264_000129_8724_10973 721
88 iso_pu_bacteria 2911138879 2911142457 721
89 3300044658 Ga0466972_0000002 Ga0466972_0000002_134299_136548 722
90 3300044765 Ga0466970_0003796 Ga0466970_0003796_1744_3993 722
91 3300009545 Ga0105237_10002536 Ga0105237_1000253613 723
92 3300044673 Ga0453683_0014626 Ga0453683_0014626_313_2562 723
93 3300045051 Ga0451576_0032357 Ga0451576_0032357_2840_5089 723
94 3300053156 Ga0500622_0000027 Ga0500622_0000027_19000_21249 723
95 3300005289 Ga0065704_10002408 Ga0065704_100024086 724
96 3300005289 Ga0065704_10082062 Ga0065704_100820623 724
97 3300005563 Ga0068855_100044349 Ga0068855_1000443494 724
98 3300009148 Ga0105243_10000007 Ga0105243_10000007185 724
99 3300025935 Ga0207709_10000033 Ga0207709_10000033285 724
100 iso_pu_bacteria 2910245624 2910247892 724
101 iso_pu_bacteria 2910245624 2910251113 724
102 3300005329 Ga0070683_100072975 Ga0070683_1000729751 725
103 3300005455 Ga0070663_100026836 Ga0070663_1000268363 725
104 3300005563 Ga0068855_100131087 Ga0068855_1001310872 725
105 3300025909 Ga0207705_10002206 Ga0207705_100022069 725
106 3300025921 Ga0207652_10003152 Ga0207652_100031526 725
107 3300032004 Ga0307414_10024608 Ga0307414_100246081 725
108 3300042007 Ga0439449_0016218 Ga0439449_0016218_93_2519 725
109 3300045051 Ga0451576_0000002 Ga0451576_0000002_1047016_1049433 725
110 3300049686 Ga0501257_000492 Ga0501257_000492_5307_7562 725
111 3300049823 Ga0501044_0116584 Ga0501044_0116584_163_2598 725
112 iso_pu_bacteria 2890737413 2890740482 725
113 iso_pu_bacteria 2902048731 2902050888 725
114 iso_pu_bacteria 8036736890 8036738964 725
115 3300031456 Ga0307513_10060259 Ga0307513_100602592 726
116 3300009147 Ga0114129_10000185 Ga0114129_1000018554 729
117 3300013102 Ga0157371_10002528 Ga0157371_100025288 729
118 3300013102 Ga0157371_10028925 Ga0157371_100289253 729
119 3300013307 Ga0157372_10106808 Ga0157372_101068082 729
120 3300025919 Ga0207657_10017753 Ga0207657_100177534 729
121 3300026142 Ga0207698_10001743 Ga0207698_100017433 729
122 3300037312 Ga0395899_0004403 Ga0395899_0004403_909_3326 729
123 3300037418 Ga0395900_0010728 Ga0395900_0010728_1854_4271 729
124 3300038443 Ga0395901_0061412 Ga0395901_0061412_1118_3535 729
125 3300044842 Ga0466957_0019637 Ga0466957_0019637_266_2557 729
126 3300050507 nmdc:mga05p37_334_c1 nmdc:mga05p37_334_c1_34449_36719 729
127 3300003316 rootH1_10072792 rootH1_100727925 730
128 3300003322 rootL2_10187534 rootL2_101875343 730
129 3300003323 rootH1_10003221 rootH1_1000322111 730

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00122

E1-E2_ATPase

E1-E2 ATPase

298

481

0.96

PF00403

HMA

Heavy-metal-associated domain

76

137

0.96

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

497

711

0.94

PF00403

HMA

Heavy-metal-associated domain

8

69

0.93

PF08282

Hydrolase_3

haloacid dehalogenase-like hydrolase

678

737

0.83

Feature Viewer

pLDDT pTM Quality
75.61 0.45 Low
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Predicted Structure (AlphaFold2)

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