F134023

General Info

Members Datasets Scaffolds Average Seq Length
127 55 124 267

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10192487|Ga0105240_101924873
Length 289
Sequence MRRWLSSANAAQSFQITNAYENMSRIQTTFGALKQQNRQALIPFITAGDPRPGITVELMHALVKGGADVIELGVPFSDPMADGPVIQRASERALAHKVSLRNVLEMVLEFRQTNNQTPVVLMGYANPVEHWGYESFAKAAHAAGVDGVLTVDMPPEEAEDLARIFKANDIDPIFLLAPTTPVSRIQAVERLASGYAYYVSLKGVTGASNLDVANVAERLAVIKQHLSVPVGVGFGIRDAQTARSVAQIADAVVIGSRLVQEVEAGEEGLAERLTTFLAGIRSAIDTARA

Samples

Sample ID Description Type Environment
1 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
2 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
7 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
8 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
9 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
10 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
11 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
12 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
13 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
14 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
15 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
16 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
17 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
18 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
19 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
20 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
21 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
22 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
23 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
24 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
25 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
26 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
27 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
28 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
29 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
30 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
31 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
32 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
33 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
34 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
35 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
36 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
37 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
38 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
39 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
40 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
41 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
42 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
43 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
44 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
45 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
46 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
47 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
48 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
49 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
50 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
51 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
52 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
53 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
54 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
55 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.34
Metatranscriptomes 6.3
Isolates 2.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 85.83
Stem 0
Stem Tuber 0
Unclassified 14.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10016131 3300003322 Bacteria 10798
2 Ga0070714_100002422 3300005435 Bacteria 13743
3 Ga0070711_100228276 3300005439 Bacteria 1451
4 Ga0070712_100118949 3300006175 Bacteria 1985
5 Ga0105240_10192487 3300009093 Bacteria 2397
6 Ga0213872_10003585 3300021361 Bacteria 8537
7 Ga0213872_10007532 3300021361 Bacteria 5350
8 Ga0207693_10167918 3300025915 Bacteria 1728
9 Ga0207663_10029202 3300025916 Bacteria 3236
10 Ga0207700_10194031 3300025928 Bacteria 1708
11 Ga0265334_10000008 3300028573 Bacteria 200602
12 Ga0265338_10007165 3300028800 Bacteria 13963
13 Ga0265331_10012865 3300031250 Bacteria 4515
14 Ga0265331_10107714 3300031250 Bacteria 1279
15 Ga0265327_10000014 3300031251 Bacteria 506288
16 Ga0265327_10001336 3300031251 Bacteria 31979
17 Ga0265327_10003404 3300031251 Bacteria 15252
18 Ga0265327_10004577 3300031251 Bacteria 12179
19 Ga0265316_10000792 3300031344 Bacteria 34876
20 Ga0265316_10029720 3300031344 Bacteria 4488
21 Ga0265313_10000807 3300031595 Bacteria 31618
22 Ga0316575_10025296 3300031665 Bacteria 2302
23 Ga0316575_10042054 3300031665 Bacteria 1809
24 Ga0316575_10059534 3300031665 Bacteria 1525
25 Ga0316579_10002978 3300031691 Bacteria 6510
26 Ga0316579_10055168 3300031691 Bacteria 1863
27 Ga0316579_10065118 3300031691 Bacteria 1719
28 Ga0316576_10009648 3300031727 Bacteria 6243
29 Ga0316576_10029667 3300031727 Bacteria 3869
30 Ga0316576_10058348 3300031727 Bacteria 2823
31 Ga0316576_10081035 3300031727 Bacteria 2408
32 Ga0316576_10090480 3300031727 Bacteria 2279
33 Ga0316576_10100734 3300031727 Bacteria 2159
34 Ga0316578_10000630 3300031728 Bacteria 12447
35 Ga0316578_10018465 3300031728 Bacteria 3822
36 Ga0316578_10029466 3300031728 Bacteria 3115
37 Ga0316578_10050732 3300031728 Bacteria 2428
38 Ga0316578_10057047 3300031728 Bacteria 2294
39 Ga0316578_10120602 3300031728 Bacteria 1576
40 Ga0316577_10011297 3300031733 Bacteria 4836
41 Ga0316577_10012010 3300031733 Bacteria 4708
42 Ga0316577_10016632 3300031733 Bacteria 4058
43 Ga0316577_10250758 3300031733 Bacteria 1001
44 Ga0316583_10000442 3300032133 Bacteria 12180
45 Ga0316583_10012268 3300032133 Bacteria 3092
46 Ga0316583_10038565 3300032133 Bacteria 1693
47 Ga0316585_10000027 3300032137 Bacteria 21775
48 Ga0316585_10042738 3300032137 Bacteria 1446
49 Ga0316580_10000400 3300032139 Bacteria 9778
50 Ga0316580_10008852 3300032139 Bacteria 3022
51 Ga0316593_10003364 3300032168 Bacteria 3958
52 Ga0316593_10003440 3300032168 Bacteria 3928
53 Ga0316593_10008138 3300032168 Bacteria 2911
54 Ga0316593_10008222 3300032168 Bacteria 2900
55 Ga0316593_10016057 3300032168 Bacteria 2263
56 Ga0316593_10026131 3300032168 Bacteria 1864
57 Ga0316593_10029104 3300032168 Bacteria 1785
58 Ga0316593_10040248 3300032168 Bacteria 1553
59 Ga0373954_0069958 3300035118 Bacteria 1667
60 Ga0316574_0000159 3300035398 Bacteria 22018
61 Ga0316574_0001978 3300035398 Bacteria 10063
62 Ga0316574_0004031 3300035398 Bacteria 7655
63 Ga0316574_0028979 3300035398 Bacteria 3342
64 Ga0316574_0059956 3300035398 Bacteria 2387
65 Ga0316574_0083025 3300035398 Bacteria 2037
66 Ga0316574_0102175 3300035398 Bacteria 1835
67 Ga0316574_0184402 3300035398 Bacteria 1342
68 Ga0316574_0241026 3300035398 Bacteria 1156
69 Ga0373927_0000010 3300035695 Bacteria 183458
70 Ga0373937_0237967 3300036401 Bacteria 1715
71 Ga0316582_0001504 3300036647 Bacteria 10303
72 Ga0316582_0001671 3300036647 Bacteria 9941
73 Ga0316582_0015092 3300036647 Bacteria 4404
74 Ga0316582_0026634 3300036647 Bacteria 3482
75 Ga0316582_0027935 3300036647 Bacteria 3414
76 Ga0316582_0036701 3300036647 Bacteria 3034
77 Ga0316582_0098395 3300036647 Bacteria 1935
78 Ga0316584_0001799 3300036712 Bacteria 13230
79 Ga0316584_0002113 3300036712 Bacteria 12431
80 Ga0316584_0006345 3300036712 Bacteria 8007
81 Ga0316584_0009900 3300036712 Bacteria 6639
82 Ga0316584_0012846 3300036712 Bacteria 5913
83 Ga0316584_0032252 3300036712 Bacteria 3877
84 Ga0316584_0055863 3300036712 Bacteria 2956
85 Ga0316584_0322990 3300036712 Bacteria 1113
86 Ga0316581_0000969 3300037588 Bacteria 6113
87 Ga0316581_0008474 3300037588 Bacteria 2799
88 Ga0316581_0010554 3300037588 Bacteria 2565
89 Ga0400490_10770 3300038726 Bacteria 9842
90 Ga0400485_10259 3300038735 Bacteria 1609
91 Ga0400488_04919 3300038741 Bacteria 4432
92 Ga0400488_13797 3300038741 Bacteria 5256
93 Ga0400486_17806 3300038742 Bacteria 7177
94 Ga0400483_035709 3300039062 Bacteria 16380
95 Ga0400483_125283 3300039062 Bacteria 6068
96 Ga0400483_195378 3300039062 Bacteria 81541
97 Ga0400483_201441 3300039062 Bacteria 2089
98 Ga0400483_250036 3300039062 Bacteria 396353
99 Ga0400489_23046 3300039093 Bacteria 8822
100 Ga0400487_07919 3300039110 Bacteria 8190
101 Ga0400487_29256 3300039110 Bacteria 7246
102 Ga0400487_53463 3300039110 Bacteria 13009
103 Ga0436361_0218415 3300039447 Bacteria 13948
104 Ga0436361_0844227 3300039447 Bacteria 15644
105 Ga0436361_1086030 3300039447 Bacteria 1868
106 Ga0451577_0000288 3300042876 Bacteria 97988
107 Ga0451577_0046152 3300042876 Bacteria 3898
108 Ga0453684_0002177 3300044712 Bacteria 48912
109 Ga0453684_0004082 3300044712 Bacteria 31712
110 Ga0453684_0010766 3300044712 Bacteria 15526
111 Ga0453684_0142129 3300044712 Bacteria 2864
112 Ga0451576_0000560 3300045051 Bacteria 79638
113 Ga0501037_0003701 3300049573 Bacteria 11101
114 Ga0501038_0000890 3300049574 Bacteria 26458
115 Ga0501042_0193723 3300049578 Bacteria 1466
116 Ga0501046_0041807 3300049580 Bacteria 3656
117 Ga0501068_0067427 3300049584 Bacteria 2181
118 Ga0501069_0019390 3300049585 Bacteria 3678
119 Ga0501070_0005927 3300049586 Bacteria 10421
120 Ga0501070_0007212 3300049586 Bacteria 9435
121 Ga0501070_0023440 3300049586 Bacteria 5171
122 Ga0501074_0000176 3300049590 Bacteria 34551
123 Ga0501076_0417760 3300049592 Bacteria 1103
124 Ga0501080_0033633 3300049742 Bacteria 4785

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300036647 Ga0316582_0098395 Ga0316582_0098395_1211_1912 214
2 3300049573 Ga0501037_0003701 Ga0501037_0003701_1453_2157 215
3 3300049574 Ga0501038_0000890 Ga0501038_0000890_4731_5435 215
4 3300049578 Ga0501042_0193723 Ga0501042_0193723_351_1055 215
5 3300049580 Ga0501046_0041807 Ga0501046_0041807_1379_2083 215
6 3300049584 Ga0501068_0067427 Ga0501068_0067427_1012_1716 215
7 3300049585 Ga0501069_0019390 Ga0501069_0019390_1475_2179 215
8 3300049586 Ga0501070_0005927 Ga0501070_0005927_7893_8597 215
9 3300049586 Ga0501070_0023440 Ga0501070_0023440_1022_1726 215
10 3300049590 Ga0501074_0000176 Ga0501074_0000176_8837_9541 215
11 3300049742 Ga0501080_0033633 Ga0501080_0033633_3773_4477 215
12 3300035398 Ga0316574_0184402 Ga0316574_0184402_615_1325 217
13 3300032137 Ga0316585_10042738 Ga0316585_100427382 229
14 3300035118 Ga0373954_0069958 Ga0373954_0069958_701_1516 240
15 3300036401 Ga0373937_0237967 Ga0373937_0237967_807_1622 240
16 3300039062 Ga0400483_195378 Ga0400483_195378_66448_67233 241
17 iso_pu_bacteria 2894510363 2894511078 244
18 iso_pu_bacteria 2989392574 2989395252 244
19 iso_pu_bacteria 8001522603 8001524306 244
20 3300028573 Ga0265334_10000008 Ga0265334_1000000814 247
21 3300031595 Ga0265313_10000807 Ga0265313_1000080717 247
22 3300031250 Ga0265331_10012865 Ga0265331_100128655 248
23 3300031250 Ga0265331_10107714 Ga0265331_101077142 248
24 3300031251 Ga0265327_10001336 Ga0265327_1000133624 248
25 3300031251 Ga0265327_10003404 Ga0265327_100034046 248
26 3300031251 Ga0265327_10004577 Ga0265327_100045775 248
27 3300031344 Ga0265316_10000792 Ga0265316_100007926 248
28 3300031344 Ga0265316_10029720 Ga0265316_100297204 248
29 3300031665 Ga0316575_10025296 Ga0316575_100252963 248
30 3300031727 Ga0316576_10081035 Ga0316576_100810352 248
31 3300031727 Ga0316576_10090480 Ga0316576_100904803 248
32 3300031728 Ga0316578_10050732 Ga0316578_100507322 248
33 3300032133 Ga0316583_10012268 Ga0316583_100122682 248
34 3300032139 Ga0316580_10000400 Ga0316580_100004006 248
35 3300032168 Ga0316593_10016057 Ga0316593_100160572 248
36 3300035398 Ga0316574_0000159 Ga0316574_0000159_2908_3711 248
37 3300036647 Ga0316582_0036701 Ga0316582_0036701_193_996 248
38 3300036712 Ga0316584_0032252 Ga0316584_0032252_2867_3670 248
39 3300039062 Ga0400483_250036 Ga0400483_250036_196447_197253 248
40 3300042876 Ga0451577_0000288 Ga0451577_0000288_57489_58292 248
41 3300042876 Ga0451577_0046152 Ga0451577_0046152_485_1288 248
42 3300044712 Ga0453684_0002177 Ga0453684_0002177_32261_33061 248
43 3300044712 Ga0453684_0010766 Ga0453684_0010766_6506_7309 248
44 3300044712 Ga0453684_0142129 Ga0453684_0142129_909_1712 248
45 3300045051 Ga0451576_0000560 Ga0451576_0000560_69003_69806 248
46 3300031251 Ga0265327_10000014 Ga0265327_10000014380 249
47 3300032133 Ga0316583_10000442 Ga0316583_100004426 249
48 3300038726 Ga0400490_10770 Ga0400490_10770_1176_1982 249
49 3300038735 Ga0400485_10259 Ga0400485_10259_224_1030 249
50 3300038741 Ga0400488_04919 Ga0400488_04919_1404_2210 249
51 3300038742 Ga0400486_17806 Ga0400486_17806_6300_7106 249
52 3300039062 Ga0400483_035709 Ga0400483_035709_7187_7993 249
53 3300039062 Ga0400483_125283 Ga0400483_125283_3161_3967 249
54 3300039062 Ga0400483_201441 Ga0400483_201441_276_1082 249
55 3300039093 Ga0400489_23046 Ga0400489_23046_4294_5100 249
56 3300039110 Ga0400487_29256 Ga0400487_29256_823_1629 249
57 3300039110 Ga0400487_53463 Ga0400487_53463_547_1353 249
58 3300031728 Ga0316578_10029466 Ga0316578_100294662 250
59 3300032168 Ga0316593_10003364 Ga0316593_100033643 250
60 3300032168 Ga0316593_10026131 Ga0316593_100261312 250
61 3300035398 Ga0316574_0004031 Ga0316574_0004031_3139_3948 250
62 3300035398 Ga0316574_0102175 Ga0316574_0102175_857_1666 250
63 3300036647 Ga0316582_0001504 Ga0316582_0001504_2328_3137 250
64 3300036647 Ga0316582_0026634 Ga0316582_0026634_1769_2578 250
65 3300036712 Ga0316584_0009900 Ga0316584_0009900_5383_6192 250
66 3300036712 Ga0316584_0055863 Ga0316584_0055863_897_1706 250
67 3300039110 Ga0400487_07919 Ga0400487_07919_5666_6478 250
68 3300044712 Ga0453684_0004082 Ga0453684_0004082_19965_20774 250
69 3300003322 rootL2_10016131 rootL2_1001613110 251
70 3300005435 Ga0070714_100002422 Ga0070714_1000024225 251
71 3300005439 Ga0070711_100228276 Ga0070711_1002282762 251
72 3300006175 Ga0070712_100118949 Ga0070712_1001189492 251
73 3300009093 Ga0105240_10192487 Ga0105240_101924873 251
74 3300021361 Ga0213872_10003585 Ga0213872_100035855 251
75 3300021361 Ga0213872_10007532 Ga0213872_100075326 251
76 3300025915 Ga0207693_10167918 Ga0207693_101679182 251
77 3300025916 Ga0207663_10029202 Ga0207663_100292023 251
78 3300025928 Ga0207700_10194031 Ga0207700_101940312 251
79 3300028800 Ga0265338_10007165 Ga0265338_1000716511 251
80 3300031665 Ga0316575_10042054 Ga0316575_100420542 251
81 3300031665 Ga0316575_10059534 Ga0316575_100595342 251
82 3300031691 Ga0316579_10002978 Ga0316579_100029785 251
83 3300031691 Ga0316579_10055168 Ga0316579_100551682 251
84 3300031691 Ga0316579_10065118 Ga0316579_100651182 251
85 3300031727 Ga0316576_10009648 Ga0316576_100096484 251
86 3300031727 Ga0316576_10029667 Ga0316576_100296673 251
87 3300031727 Ga0316576_10058348 Ga0316576_100583483 251
88 3300031727 Ga0316576_10100734 Ga0316576_101007342 251
89 3300031728 Ga0316578_10000630 Ga0316578_100006307 251
90 3300031728 Ga0316578_10018465 Ga0316578_100184653 251
91 3300031728 Ga0316578_10057047 Ga0316578_100570472 251
92 3300031728 Ga0316578_10120602 Ga0316578_101206022 251
93 3300031733 Ga0316577_10011297 Ga0316577_100112973 251
94 3300031733 Ga0316577_10012010 Ga0316577_100120104 251
95 3300031733 Ga0316577_10016632 Ga0316577_100166323 251
96 3300031733 Ga0316577_10250758 Ga0316577_102507581 251
97 3300032133 Ga0316583_10038565 Ga0316583_100385651 251
98 3300032137 Ga0316585_10000027 Ga0316585_100000278 251
99 3300032139 Ga0316580_10008852 Ga0316580_100088523 251
100 3300032168 Ga0316593_10003440 Ga0316593_100034403 251
101 3300032168 Ga0316593_10008138 Ga0316593_100081383 251
102 3300032168 Ga0316593_10008222 Ga0316593_100082223 251
103 3300032168 Ga0316593_10029104 Ga0316593_100291042 251
104 3300032168 Ga0316593_10040248 Ga0316593_100402482 251
105 3300035398 Ga0316574_0001978 Ga0316574_0001978_3773_4588 251
106 3300035398 Ga0316574_0028979 Ga0316574_0028979_2495_3322 251
107 3300035398 Ga0316574_0059956 Ga0316574_0059956_859_1695 251
108 3300035398 Ga0316574_0083025 Ga0316574_0083025_570_1415 251
109 3300035398 Ga0316574_0241026 Ga0316574_0241026_140_964 251
110 3300035695 Ga0373927_0000010 Ga0373927_0000010_110826_111647 251
111 3300036647 Ga0316582_0001671 Ga0316582_0001671_9082_9918 251
112 3300036647 Ga0316582_0015092 Ga0316582_0015092_3449_4297 251
113 3300036647 Ga0316582_0027935 Ga0316582_0027935_646_1473 251
114 3300036712 Ga0316584_0001799 Ga0316584_0001799_10037_10864 251
115 3300036712 Ga0316584_0002113 Ga0316584_0002113_2708_3544 251
116 3300036712 Ga0316584_0006345 Ga0316584_0006345_6878_7708 251
117 3300036712 Ga0316584_0012846 Ga0316584_0012846_1762_2580 251
118 3300036712 Ga0316584_0322990 Ga0316584_0322990_106_954 251
119 3300037588 Ga0316581_0000969 Ga0316581_0000969_4965_5801 251
120 3300037588 Ga0316581_0008474 Ga0316581_0008474_1697_2542 251
121 3300037588 Ga0316581_0010554 Ga0316581_0010554_514_1344 251
122 3300038741 Ga0400488_13797 Ga0400488_13797_4117_4935 251
123 3300039447 Ga0436361_0218415 Ga0436361_0218415_5811_6614 251
124 3300039447 Ga0436361_0844227 Ga0436361_0844227_6263_7066 251
125 3300039447 Ga0436361_1086030 Ga0436361_1086030_403_1206 251
126 3300049586 Ga0501070_0007212 Ga0501070_0007212_6305_7126 251
127 3300049592 Ga0501076_0417760 Ga0501076_0417760_221_1039 251

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00290

Trp_syntA

Tryptophan synthase alpha chain

30

286

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5kmy-assembly1.cif.gz_A crystal structure of tryptophan synthase subunit alpha from legionella pneumophila str. paris 0.9254 1 248
2clk-assembly1.cif.gz_A tryptophan synthase in complex with d-glyceraldehyde 3-phosphate (g3p) 0.9177 1 245
5k9x-assembly1.cif.gz_A crystal structure of tryptophan synthase alpha chain from legionella pneumophila subsp. pneumophila 0.9134 1 248
1rd5-assembly1.cif.gz_A crystal structure of tryptophan synthase alpha chain homolog bx1: a member of the chemical plant defense system 0.9118 4 246
1tjr-assembly1.cif.gz_A crystal structure of wild-type bx1 complexed with a sulfate ion 0.9116 4 245
ID Description Score Start End Superfamily
af_B4F800_73_338_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.927 4 245 3.20.20.70
af_A0A1D8PMH6_3_266_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9224 2 242 3.20.20.70
1wdwE00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9075 16 244 3.20.20.70
5ey5A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9059 1 246 3.20.20.70
2ekcA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8933 1 245 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A480AND8-F1-model_v4 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.9737 1 248 GO:0004834
GO:0005829
GO:0006568
AF-A0A4Z0BZH8-F1-model_v4 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.9722 1 247 GO:0004834
GO:0005829
GO:0006568
AF-A2WDU9-F1-model_v4 deleted 0.9706 1 250
AF-Q3JKH7-F1-model_v4 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.9704 1 251 GO:0004834
GO:0005829
GO:0006568
AF-A0A1Q7VKY7-F1-model_v4 tryptophan synthase (EC 4.2.1.20) 0.9702 1 225 GO:0004834
GO:0005829
GO:0006568

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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