F122287

General Info

Members Datasets Scaffolds Average Seq Length
124 70 248 456

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10010693|Ga0114129_100106933
Length 482
Sequence LNLSLQIITKSLRLDETSGKRGIMSELQKALDYANQNRERFLNDLIEVLKIPSISTDAEYNSDVQRAAEWMANHLKRLGMENVEVMPTDGGHPVVYADYIKRPGAPTVLIYGHYDVQPADPLELWQTGPFEPEVRGDLLFGRGSSDMKGQVLATLSSIEAMMKSGARNGVPVNLKFLLEGEEEIGSKNLEPFIKKHAEKFKADVSLNPDAGMMGPNQPTITYGLRGLAYLEINVWGPKADLHSGLYGGAVHNPAQALTELIAKMHDEKGQITLPDFYDSVRPLSEQERADFARLPNDDASYLEETGVPALWGEEGYTSAERTGARPTLEVNGLLSGWTGPGSKTVLPAKAMAKISCRLVPDQTPADVESQMVRFMEANAPKTIHWEVKRLTGSPFAIADLNNRGVKAMEKAMETVWGTRPFYRREGGSIGAVAMLQQICGVESVLVGTGLPSDNVHSPNEHLNLPTWYKGIDSFIHFFYNMG

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
23 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
24 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
25 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
30 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
31 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
32 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
33 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
34 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
35 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
36 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
37 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
38 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
39 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
40 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
41 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
42 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
43 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
44 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
45 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
46 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
47 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
48 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
49 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
50 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
51 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
52 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
53 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
54 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
55 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
56 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
57 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
60 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
61 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
62 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
63 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
64 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
65 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
66 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
67 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
68 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
69 2818991441 Niallia circulans 3243 Isolate Rhizosphere
70 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.58
Metatranscriptomes 0.81
Isolates 1.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.39
Stem 0
Stem Tuber 0
Unclassified 12.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10010693 3300009147 Bacteria 13088
2 rootH2_10082443 3300003320 Bacteria 8407
3 rootH1_10005276 3300003323 Bacteria 40654
4 Ga0065704_10000268 3300005289 Bacteria 59231
5 Ga0065704_10131820 3300005289 Bacteria 1619
6 Ga0065707_10081949 3300005295 Bacteria 27991
7 Ga0065707_10083127 3300005295 Bacteria 10317
8 Ga0065707_10083397 3300005295 Bacteria 9322
9 Ga0065707_10092205 3300005295 Unclassified 3807
10 Ga0065707_10113959 3300005295 Unclassified 2311
11 Ga0070689_100000199 3300005340 Bacteria 35970
12 Ga0070700_100036504 3300005441 Unclassified 2981
13 Ga0070708_100017774 3300005445 Bacteria 5938
14 Ga0070707_100002817 3300005468 Bacteria 16538
15 Ga0070707_100234435 3300005468 Bacteria 1786
16 Ga0070698_100102447 3300005471 Unclassified 2833
17 Ga0070698_100207274 3300005471 Bacteria 1895
18 Ga0070699_100001255 3300005518 Bacteria 23394
19 Ga0070693_100089396 3300005547 Bacteria 1854
20 Ga0068852_100071225 3300005616 Bacteria 3052
21 Ga0068862_100114277 3300005844 Bacteria 2373
22 Ga0081539_10011449 3300005985 Bacteria 7006
23 Ga0075428_100003964 3300006844 Bacteria 16241
24 Ga0075428_100021432 3300006844 Bacteria 7152
25 Ga0075430_100044123 3300006846 Bacteria 3771
26 Ga0075431_100020780 3300006847 Bacteria 6709
27 Ga0075431_100191452 3300006847 Bacteria 2096
28 Ga0075429_100002193 3300006880 Bacteria 16322
29 Ga0075429_100027313 3300006880 Bacteria 4953
30 Ga0075429_100105540 3300006880 Bacteria 2461
31 Ga0075429_100147404 3300006880 Unclassified 2060
32 Ga0075429_100172583 3300006880 Bacteria 1894
33 Ga0111539_10006750 3300009094 Bacteria 14770
34 Ga0114129_10009511 3300009147 Bacteria 13864
35 Ga0114129_10011997 3300009147 Bacteria 12323
36 Ga0114129_10024619 3300009147 Bacteria 8531
37 Ga0114129_10119710 3300009147 Bacteria 3626
38 Ga0114129_10332780 3300009147 Bacteria 2016
39 Ga0105243_10087625 3300009148 Bacteria 2556
40 Ga0105249_10013425 3300009553 Bacteria 7233
41 Ga0157372_10043320 3300013307 Bacteria 4982
42 Ga0163163_10172566 3300014325 Bacteria 2209
43 Ga0207646_10000981 3300025922 Bacteria 36664
44 Ga0207667_10020752 3300025949 Bacteria 7299
45 Ga0207712_10057609 3300025961 Bacteria 2742
46 Ga0207698_10090966 3300026142 Bacteria 2497
47 Ga0265337_1005513 3300028556 Bacteria 5021
48 Ga0265322_10005252 3300028654 Bacteria 3833
49 Ga0265336_10001755 3300028666 Bacteria 9510
50 Ga0265338_10004084 3300028800 Bacteria 19993
51 Ga0265338_10042615 3300028800 Bacteria 4224
52 Ga0265320_10019972 3300031240 Bacteria 3645
53 Ga0265331_10010945 3300031250 Bacteria 4988
54 Ga0265327_10005921 3300031251 Bacteria 9985
55 Ga0265316_10014355 3300031344 Bacteria 6976
56 Ga0316575_10005913 3300031665 Unclassified 4380
57 Ga0265314_10003034 3300031711 Bacteria 16588
58 Ga0265342_10053395 3300031712 Bacteria 2405
59 Ga0316577_10045984 3300031733 Bacteria 2439
60 Ga0307413_10032468 3300031824 Bacteria 2960
61 Ga0307416_100273111 3300032002 Bacteria 1661
62 Ga0307416_100300735 3300032002 Unclassified 1595
63 Ga0307415_100067759 3300032126 Bacteria 2496
64 Ga0316593_10013847 3300032168 Unclassified 2395
65 Ga0316574_0024088 3300035398 Unclassified 3639
66 Ga0316574_0083204 3300035398 Bacteria 2034
67 Ga0316584_0041027 3300036712 Bacteria 3450
68 Ga0316584_0092902 3300036712 Bacteria 2259
69 Ga0395899_0000109 3300037312 Bacteria 142069
70 Ga0395898_0000005 3300037466 Bacteria 621247
71 Ga0395905_0048098 3300037471 Bacteria 3998
72 Ga0436360_0103774 3300039438 Bacteria 3198
73 Ga0451577_0002983 3300042876 Bacteria 19341
74 Ga0451577_0036197 3300042876 Bacteria 4444
75 Ga0451577_0056703 3300042876 Bacteria 3494
76 Ga0451577_0070708 3300042876 Bacteria 3111
77 Ga0451577_0083720 3300042876 Unclassified 2845
78 Ga0451577_0186049 3300042876 Bacteria 1873
79 Ga0453683_0073639 3300044673 Bacteria 2138
80 Ga0466963_0159397 3300044694 Bacteria 1570
81 Ga0453684_0000055 3300044712 Bacteria 532014
82 Ga0453684_0000305 3300044712 Bacteria 207423
83 Ga0453684_0000415 3300044712 Bacteria 174067
84 Ga0453684_0000763 3300044712 Bacteria 111862
85 Ga0453684_0001422 3300044712 Bacteria 68864
86 Ga0453684_0003918 3300044712 Bacteria 32700
87 Ga0453684_0003923 3300044712 Bacteria 32677
88 Ga0453684_0009693 3300044712 Bacteria 16764
89 Ga0453684_0018441 3300044712 Bacteria 10710
90 Ga0453684_0021907 3300044712 Bacteria 9510
91 Ga0453684_0027391 3300044712 Bacteria 8175
92 Ga0453684_0032755 3300044712 Bacteria 7261
93 Ga0453684_0039689 3300044712 Bacteria 6408
94 Ga0453684_0051754 3300044712 Bacteria 5378
95 Ga0453684_0078005 3300044712 Bacteria 4148
96 Ga0453684_0100824 3300044712 Bacteria 3533
97 Ga0453684_0139037 3300044712 Unclassified 2903
98 Ga0453684_0139412 3300044712 Bacteria 2899
99 Ga0453684_0197367 3300044712 Bacteria 2349
100 Ga0466957_0001005 3300044842 Bacteria 14523
101 Ga0451576_0042936 3300045051 Unclassified 4773
102 Ga0451576_0067443 3300045051 Bacteria 3724
103 Ga0501033_0000046 3300049570 Bacteria 124370
104 Ga0501038_0007313 3300049574 Bacteria 10186
105 Ga0501071_0160121 3300049587 Bacteria 1682
106 Ga0501075_0000938 3300049591 Bacteria 18539
107 Ga0501076_0028920 3300049592 Bacteria 4307
108 Ga0501076_0054801 3300049592 Bacteria 3161
109 nmdc:mga05p37_126091_c1 3300050507 Unclassified 3144
110 nmdc:mga05p37_13920_c1 3300050507 Bacteria 9641
111 nmdc:mga05p37_95052_c1 3300050507 Unclassified 3672
112 nmdc:mga09592_12263_c1 3300050508 Bacteria 6977
113 nmdc:mga09592_191964_c1 3300050508 Bacteria 1768
114 nmdc:mga09592_294259_c1 3300050508 Unclassified 1408
115 nmdc:mga09592_70562_c1 3300050508 Bacteria 2964
116 nmdc:mga09592_73611_c1 3300050508 Bacteria 2903
117 nmdc:mga0qj67_23923_c1 3300050509 Bacteria 4704
118 nmdc:mga06r32_434595_c1 3300050510 Unclassified 1293
119 nmdc:mga06r32_83024_c1 3300050510 Bacteria 3122
120 nmdc:mga08y16_231435_c1 3300050511 Bacteria 1911
121 nmdc:mga0n895_52793_c1 3300050512 Bacteria 3991
122 Ga0501084_0009608 3300054114 Bacteria 8001
123 2819568218 2818991441 Bacteria 5062707
124 2919416919 2919414237 Bacteria 5429133
125 Ga0114129_10010693
126 rootH2_10082443
127 rootH1_10005276
128 Ga0065704_10000268
129 Ga0065704_10131820
130 Ga0065707_10081949
131 Ga0065707_10083127
132 Ga0065707_10083397
133 Ga0065707_10092205
134 Ga0065707_10113959
135 Ga0070689_100000199
136 Ga0070700_100036504
137 Ga0070708_100017774
138 Ga0070707_100002817
139 Ga0070707_100234435
140 Ga0070698_100102447
141 Ga0070698_100207274
142 Ga0070699_100001255
143 Ga0070693_100089396
144 Ga0068852_100071225
145 Ga0068862_100114277
146 Ga0081539_10011449
147 Ga0075428_100003964
148 Ga0075428_100021432
149 Ga0075430_100044123
150 Ga0075431_100020780
151 Ga0075431_100191452
152 Ga0075429_100002193
153 Ga0075429_100027313
154 Ga0075429_100105540
155 Ga0075429_100147404
156 Ga0075429_100172583
157 Ga0111539_10006750
158 Ga0114129_10009511
159 Ga0114129_10011997
160 Ga0114129_10024619
161 Ga0114129_10119710
162 Ga0114129_10332780
163 Ga0105243_10087625
164 Ga0105249_10013425
165 Ga0157372_10043320
166 Ga0163163_10172566
167 Ga0207646_10000981
168 Ga0207667_10020752
169 Ga0207712_10057609
170 Ga0207698_10090966
171 Ga0265337_1005513
172 Ga0265322_10005252
173 Ga0265336_10001755
174 Ga0265338_10004084
175 Ga0265338_10042615
176 Ga0265320_10019972
177 Ga0265331_10010945
178 Ga0265327_10005921
179 Ga0265316_10014355
180 Ga0316575_10005913
181 Ga0265314_10003034
182 Ga0265342_10053395
183 Ga0316577_10045984
184 Ga0307413_10032468
185 Ga0307416_100273111
186 Ga0307416_100300735
187 Ga0307415_100067759
188 Ga0316593_10013847
189 Ga0316574_0024088
190 Ga0316574_0083204
191 Ga0316584_0041027
192 Ga0316584_0092902
193 Ga0395899_0000109
194 Ga0395898_0000005
195 Ga0395905_0048098
196 Ga0436360_0103774
197 Ga0451577_0002983
198 Ga0451577_0036197
199 Ga0451577_0056703
200 Ga0451577_0070708
201 Ga0451577_0083720
202 Ga0451577_0186049
203 Ga0453683_0073639
204 Ga0466963_0159397
205 Ga0453684_0000055
206 Ga0453684_0000305
207 Ga0453684_0000415
208 Ga0453684_0000763
209 Ga0453684_0001422
210 Ga0453684_0003918
211 Ga0453684_0003923
212 Ga0453684_0009693
213 Ga0453684_0018441
214 Ga0453684_0021907
215 Ga0453684_0027391
216 Ga0453684_0032755
217 Ga0453684_0039689
218 Ga0453684_0051754
219 Ga0453684_0078005
220 Ga0453684_0100824
221 Ga0453684_0139037
222 Ga0453684_0139412
223 Ga0453684_0197367
224 Ga0466957_0001005
225 Ga0451576_0042936
226 Ga0451576_0067443
227 Ga0501033_0000046
228 Ga0501038_0007313
229 Ga0501071_0160121
230 Ga0501075_0000938
231 Ga0501076_0028920
232 Ga0501076_0054801
233 nmdc:mga05p37_126091_c1
234 nmdc:mga05p37_13920_c1
235 nmdc:mga05p37_95052_c1
236 nmdc:mga09592_12263_c1
237 nmdc:mga09592_191964_c1
238 nmdc:mga09592_294259_c1
239 nmdc:mga09592_70562_c1
240 nmdc:mga09592_73611_c1
241 nmdc:mga0qj67_23923_c1
242 nmdc:mga06r32_434595_c1
243 nmdc:mga06r32_83024_c1
244 nmdc:mga08y16_231435_c1
245 nmdc:mga0n895_52793_c1
246 Ga0501084_0009608
247 2819568218
248 2919416919

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07687

M20_dimer

Peptidase dimerisation domain

222

383

0.96

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

109

480

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4mmo-assembly1.cif.gz_A the crystal structure of a m20 family metallo-carboxypeptidase sso-cp2 from sulfolobus solfataricus 0.9272 17 455
4mmo-assembly1.cif.gz_A the crystal structure of a m20 family metallo-carboxypeptidase sso-cp2 from sulfolobus solfataricus 0.9171 17 455
4g1p-assembly1.cif.gz_A-2 structural and mechanistic basis of substrate recognition by novel di-peptidase dug1p from saccharomyces cerevisiae 0.9062 2 455
5vo3-assembly1.cif.gz_A-2 crystal structure of dape in complex with the products (succinic acid and diaminopimelic acid) 0.8984 11 452
3dlj-assembly3.cif.gz_A crystal structure of human carnosine dipeptidase 1 0.8947 3 455
ID Description Score Start End Superfamily
4mmoA01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9226 17 455 3.40.630.10
4mmoA01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.906 17 455 3.40.630.10
4ruhA01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9022 6 455 3.40.630.10
2pokB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8975 198 366 3.30.70.360
5xoyB01 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8972 17 455 3.40.630.10
ID Description Score Start End GO Terms
AF-A0A4Q3DWH6-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9877 148 460 GO:0016787
AF-A0A838IV84-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9874 8 130 GO:0016787
AF-A0A350V5P5-F1-model_v4 Dipeptidase 0.985 87 455 GO:0016787
AF-A0A1Z9KK64-F1-model_v4 deleted 0.9841 5 455
AF-A0A7W1SS61-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9832 1 177 GO:0016787

Map