F073751

General Info

Members Datasets Scaffolds Average Seq Length
113 93 226 207

Family's Representative Sequence

Representative Sequence 3300009176|Ga0105242_10062144|Ga0105242_100621443
Length 224
Sequence MKSNSSPAGLCTPNLMLGIEHLSLFVITGLLLNMIPGPDTFYILARTLAQGRRAGILSVLGISAGCLVHTMAAALGLSAILVASATAFMVVKLCGACYLVYLGFQMLLQSSRKEISREPALKAASGKVIFSQAILTNVLNPKVAVFFLAFLPQFISHPTHQTFLPFLFLGLVFIVNGTLYCMLLVLFASALSRQFKTSQRAAILLKRATGALFIGLGVKLAAER

Samples

Sample ID Description Type Environment
1 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
2 2209111006 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0 v1 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005277 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0 v2 (version 2) Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
16 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
33 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
43 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
44 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
45 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
46 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
47 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
48 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
49 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
50 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
51 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
52 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
53 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
54 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
55 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
56 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
57 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
58 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
59 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
60 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
61 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
62 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
65 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
66 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
67 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
68 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
69 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
70 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
71 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
72 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
73 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
74 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
77 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
78 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
79 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
80 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
81 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
82 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
83 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
84 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
85 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
86 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
87 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
88 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
89 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
90 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
91 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
92 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
93 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.23
Metatranscriptomes 0
Isolates 1.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.42
Nodule 0
Rhizoplane 3.54
Rhizosphere 74.34
Stem 0
Stem Tuber 0
Unclassified 4.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105242_10062144 3300009176 Unclassified 3073
2 2214746914 2209111006 Bacteria 915
3 rootH1_10044960 3300003316 Bacteria 2298
4 rootL2_10196490 3300003322 Bacteria 1666
5 Ga0065716_1002409 3300005277 Bacteria 1830
6 Ga0065712_10068956 3300005290 Bacteria 8467
7 Ga0070690_100089099 3300005330 Bacteria 2029
8 Ga0070690_100241397 3300005330 Bacteria 1274
9 Ga0070667_100405623 3300005367 Bacteria 1241
10 Ga0070709_10030565 3300005434 Bacteria 3233
11 Ga0070709_10343583 3300005434 Bacteria 1101
12 Ga0070711_100003438 3300005439 Bacteria 9226
13 Ga0068853_100124212 3300005539 Bacteria 2305
14 Ga0070686_100075591 3300005544 Bacteria 2216
15 Ga0070664_100250824 3300005564 Bacteria 1591
16 Ga0068852_100030708 3300005616 Bacteria 4427
17 Ga0068861_100885979 3300005719 Bacteria 844
18 Ga0068851_10280792 3300005834 Bacteria 952
19 Ga0068858_100009199 3300005842 Bacteria 9441
20 Ga0070717_10000105 3300006028 Bacteria 66343
21 Ga0070717_10052303 3300006028 Bacteria 3364
22 Ga0070717_10608328 3300006028 Bacteria 991
23 Ga0070712_100056396 3300006175 Bacteria 2756
24 Ga0097621_100425277 3300006237 Bacteria 1193
25 Ga0075428_100395255 3300006844 Bacteria 1482
26 Ga0075428_100662181 3300006844 Bacteria 1113
27 Ga0075431_101065437 3300006847 Bacteria 774
28 Ga0075433_10155832 3300006852 Bacteria 2032
29 Ga0075429_100067072 3300006880 Bacteria 3123
30 Ga0114129_10007654 3300009147 Bacteria 15375
31 Ga0105242_10002860 3300009176 Bacteria 13531
32 Ga0105248_10026099 3300009177 Bacteria 6500
33 Ga0105238_10443392 3300009551 Bacteria 1295
34 Ga0157370_10003053 3300013104 Bacteria 19855
35 Ga0163162_10039884 3300013306 Bacteria 4693
36 Ga0157375_10161952 3300013308 Unclassified 2380
37 Ga0163163_10253641 3300014325 Bacteria 1810
38 Ga0163163_10608410 3300014325 Bacteria 1156
39 Ga0157379_10051273 3300014968 Bacteria 3686
40 Ga0207656_10183924 3300025321 Bacteria 1004
41 Ga0207699_10007626 3300025906 Bacteria 5299
42 Ga0207699_10060523 3300025906 Bacteria 2274
43 Ga0207693_10262419 3300025915 Bacteria 1354
44 Ga0207694_10312865 3300025924 Bacteria 1295
45 Ga0207686_10006502 3300025934 Bacteria 6292
46 Ga0207703_10005068 3300026035 Bacteria 10664
47 Ga0207675_100409547 3300026118 Bacteria 1337
48 Ga0207698_10017293 3300026142 Bacteria 4889
49 Ga0209974_10036434 3300027876 Bacteria 1634
50 Ga0307517_10005849 3300028786 Bacteria 18395
51 Ga0307515_10013824 3300028794 Bacteria 15040
52 Ga0307515_10049507 3300028794 Bacteria 6318
53 Ga0307515_10175639 3300028794 Bacteria 2114
54 Ga0307515_10362797 3300028794 Bacteria 1089
55 Ga0265324_10059206 3300029957 Bacteria 1310
56 Ga0307513_10126653 3300031456 Bacteria 2508
57 Ga0307509_10003622 3300031507 Bacteria 23190
58 Ga0307509_10034645 3300031507 Bacteria 5545
59 Ga0307509_10067060 3300031507 Bacteria 3761
60 Ga0307509_10147362 3300031507 Bacteria 2276
61 Ga0307508_10002365 3300031616 Bacteria 19947
62 Ga0307516_10063274 3300031730 Bacteria 3582
63 Ga0307410_10127684 3300031852 Bacteria 1864
64 Ga0307415_100234212 3300032126 Bacteria 1481
65 Ga0307507_10092396 3300033179 Bacteria 2583
66 Ga0307507_10117726 3300033179 Bacteria 2140
67 Ga0307510_10014576 3300033180 Bacteria 9303
68 Ga0307510_10120543 3300033180 Bacteria 2329
69 Ga0307510_10145502 3300033180 Bacteria 2003
70 Ga0373928_0092072 3300035084 Bacteria 779
71 Ga0373955_0297971 3300035172 Bacteria 972
72 Ga0373931_0072019 3300035691 Bacteria 1889
73 Ga0373933_0321225 3300035724 Bacteria 1004
74 Ga0373925_0139869 3300037068 Bacteria 1894
75 Ga0373925_0254489 3300037068 Bacteria 1409
76 Ga0395905_0005259 3300037471 Bacteria 13240
77 Ga0439446_0073513 3300042156 Unclassified 1049
78 Ga0451577_0002165 3300042876 Bacteria 24017
79 Ga0451577_0023467 3300042876 Bacteria 5626
80 Ga0453684_1389752 3300044712 Bacteria 729
81 Ga0451576_0024563 3300045051 Bacteria 6508
82 Ga0466967_0311844 3300045976 Bacteria 1515
83 Ga0495628_0810859 3300046516 Bacteria 654
84 Ga0495666_0119473 3300046526 Bacteria 1235
85 Ga0495672_0000013 3300047320 Bacteria 511827
86 Ga0495602_0337897 3300048088 Bacteria 1090
87 Ga0495626_0052685 3300048091 Bacteria 1875
88 Ga0496102_0031335 3300048905 Bacteria 4769
89 Ga0496106_0186763 3300048909 Bacteria 1647
90 Ga0496111_0175488 3300048914 Bacteria 1593
91 Ga0496113_0293451 3300048916 Unclassified 1301
92 Ga0496126_0443551 3300048929 Bacteria 1046
93 Ga0501036_0310622 3300049572 Bacteria 1318
94 Ga0501040_0216050 3300049576 Bacteria 1364
95 Ga0501069_0181105 3300049585 Bacteria 1218
96 Ga0501071_0353402 3300049587 Bacteria 1119
97 Ga0501077_0133777 3300049593 Bacteria 1572
98 Ga0501079_0219141 3300049741 Bacteria 1486
99 Ga0501079_0264911 3300049741 Bacteria 1343
100 Ga0501081_0270053 3300049743 Bacteria 1244
101 Ga0501045_0212702 3300049824 Bacteria 1440
102 nmdc:mga05p37_30659_c1 3300050507 Bacteria 6562
103 nmdc:mga09592_60383_c1 3300050508 Bacteria 3205
104 nmdc:mga06r32_164281_c1 3300050510 Bacteria 2203
105 nmdc:mga08y16_444704_c1 3300050511 Unclassified 1322
106 Ga0500641_0000242 3300053096 Bacteria 20695
107 Ga0500614_060528 3300053123 Bacteria 1017
108 Ga0500652_040834 3300053131 Bacteria 1866
109 Ga0500559_0001341 3300053136 Bacteria 14123
110 Ga0500599_031364 3300053736 Bacteria 792
111 Ga0501084_0298710 3300054114 Bacteria 1360
112 2513232258 2513020052 Bacteria 5120511
113 2898333011 2898329390 Bacteria 5168154
114 Ga0105242_10062144
115 2214746914
116 rootH1_10044960
117 rootL2_10196490
118 Ga0065716_1002409
119 Ga0065712_10068956
120 Ga0070690_100089099
121 Ga0070690_100241397
122 Ga0070667_100405623
123 Ga0070709_10030565
124 Ga0070709_10343583
125 Ga0070711_100003438
126 Ga0068853_100124212
127 Ga0070686_100075591
128 Ga0070664_100250824
129 Ga0068852_100030708
130 Ga0068861_100885979
131 Ga0068851_10280792
132 Ga0068858_100009199
133 Ga0070717_10000105
134 Ga0070717_10052303
135 Ga0070717_10608328
136 Ga0070712_100056396
137 Ga0097621_100425277
138 Ga0075428_100395255
139 Ga0075428_100662181
140 Ga0075431_101065437
141 Ga0075433_10155832
142 Ga0075429_100067072
143 Ga0114129_10007654
144 Ga0105242_10002860
145 Ga0105248_10026099
146 Ga0105238_10443392
147 Ga0157370_10003053
148 Ga0163162_10039884
149 Ga0157375_10161952
150 Ga0163163_10253641
151 Ga0163163_10608410
152 Ga0157379_10051273
153 Ga0207656_10183924
154 Ga0207699_10007626
155 Ga0207699_10060523
156 Ga0207693_10262419
157 Ga0207694_10312865
158 Ga0207686_10006502
159 Ga0207703_10005068
160 Ga0207675_100409547
161 Ga0207698_10017293
162 Ga0209974_10036434
163 Ga0307517_10005849
164 Ga0307515_10013824
165 Ga0307515_10049507
166 Ga0307515_10175639
167 Ga0307515_10362797
168 Ga0265324_10059206
169 Ga0307513_10126653
170 Ga0307509_10003622
171 Ga0307509_10034645
172 Ga0307509_10067060
173 Ga0307509_10147362
174 Ga0307508_10002365
175 Ga0307516_10063274
176 Ga0307410_10127684
177 Ga0307415_100234212
178 Ga0307507_10092396
179 Ga0307507_10117726
180 Ga0307510_10014576
181 Ga0307510_10120543
182 Ga0307510_10145502
183 Ga0373928_0092072
184 Ga0373955_0297971
185 Ga0373931_0072019
186 Ga0373933_0321225
187 Ga0373925_0139869
188 Ga0373925_0254489
189 Ga0395905_0005259
190 Ga0439446_0073513
191 Ga0451577_0002165
192 Ga0451577_0023467
193 Ga0453684_1389752
194 Ga0451576_0024563
195 Ga0466967_0311844
196 Ga0495628_0810859
197 Ga0495666_0119473
198 Ga0495672_0000013
199 Ga0495602_0337897
200 Ga0495626_0052685
201 Ga0496102_0031335
202 Ga0496106_0186763
203 Ga0496111_0175488
204 Ga0496113_0293451
205 Ga0496126_0443551
206 Ga0501036_0310622
207 Ga0501040_0216050
208 Ga0501069_0181105
209 Ga0501071_0353402
210 Ga0501077_0133777
211 Ga0501079_0219141
212 Ga0501079_0264911
213 Ga0501081_0270053
214 Ga0501045_0212702
215 nmdc:mga05p37_30659_c1
216 nmdc:mga09592_60383_c1
217 nmdc:mga06r32_164281_c1
218 nmdc:mga08y16_444704_c1
219 Ga0500641_0000242
220 Ga0500614_060528
221 Ga0500652_040834
222 Ga0500559_0001341
223 Ga0500599_031364
224 Ga0501084_0298710
225 2513232258
226 2898333011

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01810

LysE

LysE type translocator

30

224

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vcf-assembly1.cif.gz_A cryo-em structure of chlamydomonas toc-tic supercomplex 0.6025 7 204
7vcf-assembly1.cif.gz_A cryo-em structure of chlamydomonas toc-tic supercomplex 0.571 7 204
7xzi-assembly1.cif.gz_A cryo-em structure of toc-tic supercomplex from chlamydomonas reinhardtii 0.5402 6 204
7xzi-assembly1.cif.gz_A cryo-em structure of toc-tic supercomplex from chlamydomonas reinhardtii 0.5141 6 204
7wn1-assembly1.cif.gz_A structure of pfnt1(y190a) in complex with nanobody 48 and inosine 0.4892 7 207
ID Description Score Start End Superfamily
af_Q2FZP3_16_220_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5471 9 207 1.20.1250.20
af_Q69S28_20_412_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5355 10 207 1.20.1250.20
af_Q2FZP3_16_220_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5333 9 207 1.20.1250.20
af_P67127_16_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5212 9 209 1.20.1250.20
af_Q0D5J2_1_233_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5173 10 207 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A563VS04-F1-model_v4 Uncharacterized membrane protein YrhP 0.9484 1 208 GO:0005886
GO:0015171
AF-A0A2N5ZSP2-F1-model_v4 Homoserine lactone transporter 0.9476 5 210 GO:0005886
GO:0015171
AF-A0A2N5ZSP2-F1-model_v4 Homoserine lactone transporter 0.9431 5 210 GO:0005886
GO:0015171
AF-A0A5C6YIF2-F1-model_v4 deleted 0.9397 8 210
AF-A0A563VS04-F1-model_v4 Uncharacterized membrane protein YrhP 0.9396 1 208 GO:0005886
GO:0015171

Map