F054850

General Info

Members Datasets Scaffolds Average Seq Length
109 69 109 207

Family's Representative Sequence

Representative Sequence 3300031728|Ga0316578_10001270|Ga0316578_100012707
Length 228
Sequence MGEPGEGSRKRIGRQNETMTHGPSRYPIPARPHRVEEVVRKSRFITVLAHAPTAEAVQAVLASIKDEFPDATHHCWAYVAGPPGESASIGMSDDGEPHGTAGRPMLTALLHSGVGEIVAVCTRYYGGTKLGTGGLSRAYSGGVRLALESLPTQERVERVTLRVEVAYEALDSLRRLLEEAEAVVETEEYGEVVRYRVAVPTEEVDRLTHRLAGITRGKAVVEVAEREA

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
5 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
6 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
7 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
8 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
9 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
10 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
11 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
12 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
13 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
14 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
15 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
16 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
25 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
26 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
27 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
28 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
29 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
30 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
31 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
32 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
33 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
34 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
35 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
36 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
37 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
38 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
39 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
40 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
41 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
42 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
43 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
44 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
45 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
46 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
47 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
48 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
49 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
50 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
51 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
52 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
53 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
54 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
55 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
56 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
57 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
58 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
59 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
60 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
61 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
62 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
63 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
64 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
65 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
66 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
67 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
68 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
69 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 97.25
Stem 0
Stem Tuber 0
Unclassified 2.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10201413 3300005327 Bacteria 1680
2 Ga0070683_100848102 3300005329 Bacteria 876
3 Ga0070683_100902977 3300005329 Viruses 847
4 Ga0070714_100000527 3300005435 Bacteria 27655
5 Ga0070714_100019753 3300005435 Bacteria 5495
6 Ga0070714_100084598 3300005435 Bacteria 2768
7 Ga0070681_10090897 3300005458 Bacteria 3003
8 Ga0070679_100040193 3300005530 Bacteria 4653
9 Ga0070679_100122536 3300005530 Bacteria 2584
10 Ga0070679_100149608 3300005530 Bacteria 2312
11 Ga0068855_100889894 3300005563 Archaea 941
12 Ga0068859_100855466 3300005617 Bacteria 995
13 Ga0068862_100019238 3300005844 Bacteria 5695
14 Ga0097620_100855357 3300006931 Bacteria 995
15 Ga0105249_10000009 3300009553 Bacteria 313866
16 Ga0157369_10368897 3300013105 Unclassified 1490
17 Ga0157380_10558063 3300014326 Bacteria 1125
18 Ga0157376_10122493 3300014969 Bacteria 2307
19 Ga0163161_10057430 3300017792 Bacteria 2827
20 Ga0213872_10043169 3300021361 Bacteria 2055
21 Ga0207705_10070686 3300025909 Bacteria 2530
22 Ga0207707_10105852 3300025912 Bacteria 2459
23 Ga0207652_10122554 3300025921 Bacteria 2314
24 Ga0207652_10139900 3300025921 Bacteria 2164
25 Ga0207652_10169422 3300025921 Bacteria 1959
26 Ga0207664_10000476 3300025929 Bacteria 28417
27 Ga0207664_10512348 3300025929 Bacteria 1075
28 Ga0207712_10000077 3300025961 Bacteria 119803
29 Ga0207668_10134057 3300025972 Bacteria 1895
30 Ga0268266_10877221 3300028379 Bacteria 867
31 Ga0268265_10019838 3300028380 Bacteria 4682
32 Ga0316575_10079376 3300031665 Bacteria 1323
33 Ga0316576_10005164 3300031727 Bacteria 7933
34 Ga0316576_10046029 3300031727 Bacteria 3156
35 Ga0316576_10144498 3300031727 Bacteria 1791
36 Ga0316576_10302545 3300031727 Unclassified 1195
37 Ga0316576_10468200 3300031727 Unclassified 929
38 Ga0316578_10001270 3300031728 Bacteria 10088
39 Ga0316578_10001640 3300031728 Bacteria 9287
40 Ga0316578_10041718 3300031728 Bacteria 2658
41 Ga0307405_10036968 3300031731 Bacteria 2931
42 Ga0307405_10246911 3300031731 Bacteria 1326
43 Ga0316577_10000111 3300031733 Bacteria 22994
44 Ga0316577_10005387 3300031733 Bacteria 6708
45 Ga0316577_10008383 3300031733 Bacteria 5540
46 Ga0316577_10041855 3300031733 Bacteria 2563
47 Ga0316577_10066009 3300031733 Unclassified 2021
48 Ga0307413_10002648 3300031824 Bacteria 7331
49 Ga0307410_10014072 3300031852 Archaea 4694
50 Ga0307410_10097290 3300031852 Bacteria 2102
51 Ga0307410_10160760 3300031852 Bacteria 1683
52 Ga0307406_10032036 3300031901 Bacteria 3206
53 Ga0307407_10013147 3300031903 Bacteria 4005
54 Ga0307407_10291401 3300031903 Bacteria 1134
55 Ga0307412_10051094 3300031911 Bacteria 2731
56 Ga0307412_10918842 3300031911 Bacteria 768
57 Ga0307409_100139917 3300031995 Bacteria 2084
58 Ga0307409_100621441 3300031995 Bacteria 1070
59 Ga0307416_100995650 3300032002 Unclassified 941
60 Ga0307416_101515371 3300032002 Bacteria 776
61 Ga0307416_101543889 3300032002 Bacteria 770
62 Ga0307414_10069783 3300032004 Bacteria 2528
63 Ga0307414_10481681 3300032004 Bacteria 1094
64 Ga0307411_10280725 3300032005 Bacteria 1325
65 Ga0307411_10718183 3300032005 Bacteria 872
66 Ga0307415_100503057 3300032126 Bacteria 1060
67 Ga0307415_101247281 3300032126 Bacteria 702
68 Ga0316583_10000066 3300032133 Bacteria 21340
69 Ga0316583_10040897 3300032133 Bacteria 1641
70 Ga0316585_10015755 3300032137 Unclassified 2270
71 Ga0373955_0142855 3300035172 Bacteria 1405
72 Ga0316574_0039116 3300035398 Bacteria 2915
73 Ga0316574_0086169 3300035398 Bacteria 1999
74 Ga0316574_0199992 3300035398 Bacteria 1283
75 Ga0373947_0069061 3300035725 Bacteria 2162
76 Ga0316582_0019110 3300036647 Bacteria 4004
77 Ga0316582_0280267 3300036647 Bacteria 1144
78 Ga0316584_0000315 3300036712 Bacteria 24865
79 Ga0316584_0050572 3300036712 Unclassified 3107
80 Ga0316584_0053173 3300036712 Unclassified 3030
81 Ga0316584_0321646 3300036712 Bacteria 1116
82 Ga0316584_0335197 3300036712 Bacteria 1088
83 Ga0395899_0018198 3300037312 Bacteria 5345
84 Ga0395900_0189128 3300037418 Bacteria 2089
85 Ga0395898_0463687 3300037466 Bacteria 1206
86 Ga0395905_0114890 3300037471 Bacteria 2529
87 Ga0395901_0034343 3300038443 Bacteria 5237
88 Ga0400490_25941 3300038726 Bacteria 1960
89 Ga0400490_55871 3300038726 Bacteria 1737
90 Ga0436365_0387826 3300039437 Bacteria 1911
91 Ga0436361_1038869 3300039447 Bacteria 4002
92 Ga0450898_013796 3300042134 Bacteria 1352
93 Ga0466966_0054500 3300044684 Bacteria 2534
94 Ga0466966_0078638 3300044684 Bacteria 2056
95 Ga0453684_0038296 3300044712 Bacteria 6558
96 Ga0451576_0104128 3300045051 Bacteria 2952
97 Ga0466967_0174221 3300045976 Bacteria 2026
98 Ga0495662_0059155 3300046476 Bacteria 1851
99 Ga0495642_0220661 3300046528 Bacteria 828
100 Ga0495586_0291586 3300046535 Bacteria 934
101 Ga0495621_0102862 3300046539 Bacteria 1089
102 Ga0495647_0004759 3300046681 Bacteria 4430
103 Ga0495613_0098127 3300046689 Bacteria 2117
104 Ga0495636_0078148 3300047318 Bacteria 1421
105 Ga0495674_0310480 3300047319 Bacteria 1287
106 Ga0495675_0133138 3300047444 Bacteria 1544
107 Ga0495675_0287171 3300047444 Bacteria 980
108 Ga0501238_039315 3300049671 Bacteria 694
109 Ga0466962_0176924 3300061719 Bacteria 1040

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005530 Ga0070679_100122536 Ga0070679_1001225362 189
2 3300025921 Ga0207652_10139900 Ga0207652_101399003 189
3 3300042134 Ga0450898_013796 Ga0450898_013796_661_1287 189
4 3300035398 Ga0316574_0086169 Ga0316574_0086169_521_1105 190
5 3300036712 Ga0316584_0050572 Ga0316584_0050572_2063_2647 190
6 3300036712 Ga0316584_0053173 Ga0316584_0053173_1291_1875 190
7 3300049671 Ga0501238_039315 Ga0501238_039315_100_684 190
8 3300031727 Ga0316576_10046029 Ga0316576_100460292 192
9 3300031728 Ga0316578_10041718 Ga0316578_100417183 192
10 3300031733 Ga0316577_10008383 Ga0316577_100083832 192
11 3300036647 Ga0316582_0280267 Ga0316582_0280267_275_859 192
12 3300036712 Ga0316584_0321646 Ga0316584_0321646_511_1095 192
13 3300031911 Ga0307412_10918842 Ga0307412_109188421 193
14 3300017792 Ga0163161_10057430 Ga0163161_100574302 194
15 3300021361 Ga0213872_10043169 Ga0213872_100431693 194
16 3300039447 Ga0436361_1038869 Ga0436361_1038869_2750_3349 194
17 3300045976 Ga0466967_0174221 Ga0466967_0174221_1018_1602 194
18 3300061719 Ga0466962_0176924 Ga0466962_0176924_270_854 194
19 3300031995 Ga0307409_100139917 Ga0307409_1001399172 197
20 3300031665 Ga0316575_10079376 Ga0316575_100793762 198
21 3300031727 Ga0316576_10005164 Ga0316576_100051647 198
22 3300031728 Ga0316578_10001640 Ga0316578_100016404 198
23 3300031733 Ga0316577_10005387 Ga0316577_100053874 198
24 3300031733 Ga0316577_10041855 Ga0316577_100418553 198
25 3300035398 Ga0316574_0039116 Ga0316574_0039116_2084_2725 198
26 3300035398 Ga0316574_0199992 Ga0316574_0199992_234_878 198
27 3300036647 Ga0316582_0019110 Ga0316582_0019110_779_1420 198
28 3300036712 Ga0316584_0000315 Ga0316584_0000315_22162_22803 198
29 3300036712 Ga0316584_0335197 Ga0316584_0335197_75_719 198
30 3300044684 Ga0466966_0078638 Ga0466966_0078638_1320_1925 198
31 3300005435 Ga0070714_100000527 Ga0070714_10000052710 199
32 3300025929 Ga0207664_10000476 Ga0207664_1000047619 199
33 3300038726 Ga0400490_25941 Ga0400490_25941_1226_1825 199
34 3300005563 Ga0068855_100889894 Ga0068855_1008898942 200
35 3300014326 Ga0157380_10558063 Ga0157380_105580631 200
36 3300031903 Ga0307407_10013147 Ga0307407_100131475 200
37 3300032002 Ga0307416_101543889 Ga0307416_1015438891 200
38 3300035172 Ga0373955_0142855 Ga0373955_0142855_476_1096 200
39 3300035725 Ga0373947_0069061 Ga0373947_0069061_1383_2003 200
40 3300038726 Ga0400490_55871 Ga0400490_55871_312_917 200
41 3300044712 Ga0453684_0038296 Ga0453684_0038296_4077_4685 200
42 3300046476 Ga0495662_0059155 Ga0495662_0059155_22_642 200
43 3300046535 Ga0495586_0291586 Ga0495586_0291586_166_786 200
44 3300046681 Ga0495647_0004759 Ga0495647_0004759_503_1123 200
45 3300047319 Ga0495674_0310480 Ga0495674_0310480_508_1128 200
46 3300025909 Ga0207705_10070686 Ga0207705_100706862 201
47 3300031731 Ga0307405_10246911 Ga0307405_102469111 201
48 3300032126 Ga0307415_100503057 Ga0307415_1005030571 201
49 3300039437 Ga0436365_0387826 Ga0436365_0387826_128_736 201
50 3300005327 Ga0070658_10201413 Ga0070658_102014132 202
51 3300005329 Ga0070683_100848102 Ga0070683_1008481021 202
52 3300005329 Ga0070683_100902977 Ga0070683_1009029771 202
53 3300005435 Ga0070714_100019753 Ga0070714_1000197538 202
54 3300005435 Ga0070714_100084598 Ga0070714_1000845983 202
55 3300005458 Ga0070681_10090897 Ga0070681_100908975 202
56 3300005530 Ga0070679_100040193 Ga0070679_1000401933 202
57 3300005530 Ga0070679_100149608 Ga0070679_1001496082 202
58 3300005617 Ga0068859_100855466 Ga0068859_1008554662 202
59 3300005844 Ga0068862_100019238 Ga0068862_1000192389 202
60 3300006931 Ga0097620_100855357 Ga0097620_1008553572 202
61 3300009553 Ga0105249_10000009 Ga0105249_10000009111 202
62 3300013105 Ga0157369_10368897 Ga0157369_103688973 202
63 3300014969 Ga0157376_10122493 Ga0157376_101224933 202
64 3300025912 Ga0207707_10105852 Ga0207707_101058524 202
65 3300025921 Ga0207652_10122554 Ga0207652_101225542 202
66 3300025921 Ga0207652_10169422 Ga0207652_101694222 202
67 3300025929 Ga0207664_10512348 Ga0207664_105123482 202
68 3300025961 Ga0207712_10000077 Ga0207712_1000007759 202
69 3300025972 Ga0207668_10134057 Ga0207668_101340573 202
70 3300028379 Ga0268266_10877221 Ga0268266_108772211 202
71 3300028380 Ga0268265_10019838 Ga0268265_100198386 202
72 3300031727 Ga0316576_10144498 Ga0316576_101444982 202
73 3300031727 Ga0316576_10302545 Ga0316576_103025452 202
74 3300031727 Ga0316576_10468200 Ga0316576_104682001 202
75 3300031728 Ga0316578_10001270 Ga0316578_100012707 202
76 3300031731 Ga0307405_10036968 Ga0307405_100369683 202
77 3300031733 Ga0316577_10000111 Ga0316577_100001114 202
78 3300031733 Ga0316577_10066009 Ga0316577_100660091 202
79 3300031824 Ga0307413_10002648 Ga0307413_100026482 202
80 3300031852 Ga0307410_10014072 Ga0307410_100140724 202
81 3300031852 Ga0307410_10097290 Ga0307410_100972902 202
82 3300031852 Ga0307410_10160760 Ga0307410_101607601 202
83 3300031901 Ga0307406_10032036 Ga0307406_100320362 202
84 3300031903 Ga0307407_10291401 Ga0307407_102914012 202
85 3300031911 Ga0307412_10051094 Ga0307412_100510942 202
86 3300031995 Ga0307409_100621441 Ga0307409_1006214412 202
87 3300032002 Ga0307416_100995650 Ga0307416_1009956501 202
88 3300032002 Ga0307416_101515371 Ga0307416_1015153711 202
89 3300032004 Ga0307414_10069783 Ga0307414_100697833 202
90 3300032004 Ga0307414_10481681 Ga0307414_104816812 202
91 3300032005 Ga0307411_10280725 Ga0307411_102807252 202
92 3300032005 Ga0307411_10718183 Ga0307411_107181831 202
93 3300032126 Ga0307415_101247281 Ga0307415_1012472811 202
94 3300032133 Ga0316583_10000066 Ga0316583_1000006610 202
95 3300032133 Ga0316583_10040897 Ga0316583_100408972 202
96 3300032137 Ga0316585_10015755 Ga0316585_100157553 202
97 3300037312 Ga0395899_0018198 Ga0395899_0018198_3284_3925 202
98 3300037418 Ga0395900_0189128 Ga0395900_0189128_1426_2067 202
99 3300037466 Ga0395898_0463687 Ga0395898_0463687_285_926 202
100 3300037471 Ga0395905_0114890 Ga0395905_0114890_1389_2030 202
101 3300038443 Ga0395901_0034343 Ga0395901_0034343_3176_3817 202
102 3300044684 Ga0466966_0054500 Ga0466966_0054500_1242_1868 202
103 3300045051 Ga0451576_0104128 Ga0451576_0104128_560_1186 202
104 3300046528 Ga0495642_0220661 Ga0495642_0220661_126_746 202
105 3300046539 Ga0495621_0102862 Ga0495621_0102862_24_650 202
106 3300046689 Ga0495613_0098127 Ga0495613_0098127_222_842 202
107 3300047318 Ga0495636_0078148 Ga0495636_0078148_464_1090 202
108 3300047444 Ga0495675_0133138 Ga0495675_0133138_309_929 202
109 3300047444 Ga0495675_0287171 Ga0495675_0287171_274_894 202

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09186

DUF1949

Domain of unknown function (DUF1949)

163

218

0.98

PF01205

UPF0029

Uncharacterized protein family UPF0029

40

147

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7oya-assembly1.cif.gz_v2 cryo-em structure of the 1 hpf zebrafish embryo 80s ribosome 0.898 138 200
6wue-assembly1.cif.gz_B-2 tetragonal crystal form of sbtb from synechocystis pcc6803 0.846 135 202
3grz-assembly1.cif.gz_B crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.8356 144 178
4wk3-assembly1.cif.gz_A structure of staphyloccus aureus psta 0.8315 136 201
4rwx-assembly1.cif.gz_B crystal structure of l. monocytogenes psta 0.8177 138 201
ID Description Score Start End Superfamily
af_Q6ZJC5_65_187_3.30.230.30 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Impact, N-terminal domain 0.9862 4 131 3.30.230.30
af_P27862_1_132_3.30.230.30 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Impact, N-terminal domain 0.9779 1 131 3.30.230.30
af_Q2G059_1_130_3.30.230.30 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Impact, N-terminal domain 0.9715 4 131 3.30.230.30
af_P27862_1_132_3.30.230.30 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Impact, N-terminal domain 0.9634 1 131 3.30.230.30
af_Q6ZJC5_65_187_3.30.230.30 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Impact, N-terminal domain 0.9626 4 131 3.30.230.30
ID Description Score Start End GO Terms
AF-A0A7X7PJI5-F1-model_v4 Impact N-terminal domain-containing protein 0.9884 16 115 GO:0005737
GO:0006446
AF-A0A4Q0MUD8-F1-model_v4 deleted 0.9854 10 114
AF-A0A661E8A7-F1-model_v4 YigZ family protein 0.9847 4 201 GO:0005737
GO:0006446
GO:0017111
GO:0032561
AF-H5V6E3-F1-model_v4 Impact N-terminal domain-containing protein 0.9773 1 129 GO:0005737
GO:0006446
AF-A0A2X1NBS9-F1-model_v4 Elongation factor 0.9767 1 133 GO:0003746
GO:0005737
GO:0006446

Feature Viewer

pLDDT pTM Quality
95.33 0.8 High
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Predicted Structure (AlphaFold2)

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