F034694

General Info

Members Datasets Scaffolds Average Seq Length
105 44 105 442

Family's Representative Sequence

Representative Sequence 3300050507|nmdc:mga05p37_7415_c1|nmdc:mga05p37_7415_c1_1840_3240
Length 466
Sequence MFKQYDPQTARQTILKRTPPDEFPVSQRVLDRITQLFGEQLTPEEAVARILKDVRTHGDSALQTWTQRLDSIDPSTDRSAQRLQPASVSKALIQSALDSISPAQRDALEKAAARIEEFHRRQPLTSWFTNDLGGTLGQIIRPIQRVGLYVPGGTAPLPSTVLMSAIPARVAGVKEIVVVTPPALKTKRVLSGAEASPAALPIAPIILAACAIAGVSEVYPVGGAQAIAALAYGTETIAPVDKIFGPGNLFVTLAKRQVYGVVGIDGLAGPTETVVIADEFANPAWVAADLLAQAEHDLLASAILLTSSQPLIENVQGEIAKQIEEHGRADIITASLENRSGAILTYDLEEAVQLANAYAPEHLGLSVRDPWRWVEKIKNAGGVFMGEHSFEVLGDYLAGPSHVMPTGGSARFASPLNVWDFVKIVSLVALDESTAQAIGPVAAVMAESEGLDAHANAALLRMEEST

Samples

Sample ID Description Type Environment
1 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
5 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
6 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
7 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
8 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
9 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
10 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
12 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
13 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
14 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
15 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
16 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
17 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
19 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
20 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
23 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
24 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
25 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
26 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
27 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
28 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
29 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
30 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
31 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
32 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
33 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
34 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
35 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
36 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
37 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
38 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
39 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
40 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
41 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
42 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
43 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
44 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 95.24
Stem 0
Stem Tuber 0
Unclassified 4.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065704_10000486 3300005289 Bacteria 19628
2 Ga0065707_10000535 3300005295 Bacteria 34436
3 Ga0065707_10002920 3300005295 Bacteria 10925
4 Ga0065707_10084761 3300005295 Bacteria 6806
5 Ga0065707_10087361 3300005295 Bacteria 5059
6 Ga0065707_10100598 3300005295 Unclassified 2915
7 Ga0070683_100058841 3300005329 Bacteria 3570
8 Ga0070706_100200687 3300005467 Bacteria 1863
9 Ga0070698_100019891 3300005471 Bacteria 7042
10 Ga0070698_100043358 3300005471 Bacteria 4612
11 Ga0070699_100003138 3300005518 Bacteria 14621
12 Ga0070684_100056497 3300005535 Bacteria 3426
13 Ga0068859_100090850 3300005617 Bacteria 3104
14 Ga0068859_100231256 3300005617 Bacteria 1937
15 Ga0068862_100008774 3300005844 Bacteria 8372
16 Ga0081455_10043405 3300005937 Bacteria 3933
17 Ga0081540_1002481 3300005983 Bacteria 15029
18 Ga0097621_100023775 3300006237 Bacteria 4775
19 Ga0075428_100063200 3300006844 Unclassified 4053
20 Ga0075431_100126200 3300006847 Bacteria 2640
21 Ga0075429_100011345 3300006880 Bacteria 7715
22 Ga0075429_100049471 3300006880 Bacteria 3655
23 Ga0075429_100162681 3300006880 Bacteria 1955
24 Ga0097620_100090851 3300006931 Bacteria 3104
25 Ga0097620_100231263 3300006931 Bacteria 1937
26 Ga0114129_10000912 3300009147 Bacteria 38496
27 Ga0114129_10026236 3300009147 Bacteria 8252
28 Ga0114129_10182548 3300009147 Unclassified 2854
29 Ga0157374_10000047 3300013296 Bacteria 137075
30 Ga0157376_10004643 3300014969 Bacteria 9575
31 Ga0207684_10171149 3300025910 Bacteria 1872
32 Ga0268265_10039635 3300028380 Bacteria 3474
33 Ga0268265_10086233 3300028380 Bacteria 2495
34 Ga0265318_10005275 3300028577 Bacteria 6079
35 Ga0265330_10044051 3300031235 Unclassified 1972
36 Ga0265320_10026990 3300031240 Unclassified 2999
37 Ga0265340_10019044 3300031247 Bacteria 3535
38 Ga0265331_10018792 3300031250 Bacteria 3575
39 Ga0265327_10067468 3300031251 Bacteria 1802
40 Ga0307513_10255705 3300031456 Bacteria 1545
41 Ga0316575_10007572 3300031665 Bacteria 3932
42 Ga0316574_0001688 3300035398 Bacteria 10666
43 Ga0316584_0029038 3300036712 Bacteria 4083
44 Ga0395900_0310898 3300037418 Bacteria 1559
45 Ga0395901_0009771 3300038443 Bacteria 9729
46 Ga0395901_0096926 3300038443 Bacteria 3091
47 Ga0400483_093462 3300039062 Bacteria 36306
48 Ga0400483_148730 3300039062 Bacteria 34096
49 Ga0400483_259015 3300039062 Bacteria 1367
50 Ga0400489_73490 3300039093 Bacteria 42457
51 Ga0451577_0002977 3300042876 Bacteria 19376
52 Ga0451577_0005780 3300042876 Bacteria 12536
53 Ga0451577_0016577 3300042876 Bacteria 6818
54 Ga0451577_0076578 3300042876 Bacteria 2982
55 Ga0451577_0176422 3300042876 Bacteria 1926
56 Ga0451577_0183144 3300042876 Bacteria 1889
57 Ga0451577_0185803 3300042876 Bacteria 1874
58 Ga0451577_0224310 3300042876 Bacteria 1699
59 Ga0453683_0000229 3300044673 Bacteria 74916
60 Ga0453683_0002932 3300044673 Bacteria 12863
61 Ga0453683_0005961 3300044673 Bacteria 8400
62 Ga0453683_0013019 3300044673 Bacteria 5439
63 Ga0453683_0019356 3300044673 Bacteria 4362
64 Ga0453683_0041976 3300044673 Bacteria 2873
65 Ga0453683_0154355 3300044673 Unclassified 1451
66 Ga0453684_0000095 3300044712 Bacteria 378681
67 Ga0453684_0000157 3300044712 Bacteria 304259
68 Ga0453684_0000271 3300044712 Bacteria 223654
69 Ga0453684_0006346 3300044712 Bacteria 22552
70 Ga0453684_0007401 3300044712 Bacteria 20221
71 Ga0453684_0008162 3300044712 Bacteria 18896
72 Ga0453684_0017099 3300044712 Bacteria 11264
73 Ga0453684_0023147 3300044712 Bacteria 9170
74 Ga0453684_0027034 3300044712 Bacteria 8252
75 Ga0453684_0029059 3300044712 Bacteria 7865
76 Ga0453684_0038000 3300044712 Bacteria 6594
77 Ga0453684_0038791 3300044712 Bacteria 6502
78 Ga0453684_0042935 3300044712 Bacteria 6086
79 Ga0453684_0044547 3300044712 Bacteria 5934
80 Ga0453684_0049355 3300044712 Bacteria 5551
81 Ga0453684_0054757 3300044712 Bacteria 5193
82 Ga0453684_0054850 3300044712 Bacteria 5187
83 Ga0453684_0069807 3300044712 Bacteria 4454
84 Ga0453684_0133987 3300044712 Unclassified 2969
85 Ga0453684_0140167 3300044712 Bacteria 2889
86 Ga0453684_0192190 3300044712 Bacteria 2387
87 Ga0453684_0196994 3300044712 Bacteria 2351
88 Ga0453684_0388442 3300044712 Unclassified 1566
89 Ga0451576_0002905 3300045051 Bacteria 24465
90 Ga0451576_0004720 3300045051 Bacteria 17521
91 Ga0451576_0009324 3300045051 Bacteria 11396
92 Ga0451576_0023460 3300045051 Bacteria 6679
93 Ga0451576_0044780 3300045051 Unclassified 4662
94 Ga0451576_0066569 3300045051 Unclassified 3750
95 Ga0451576_0085824 3300045051 Bacteria 3274
96 Ga0501034_0018012 3300049571 Bacteria 7247
97 Ga0501048_0205192 3300049582 Bacteria 1398
98 nmdc:mga05p37_110733_c1 3300050507 Bacteria 3377
99 nmdc:mga05p37_19333_c1 3300050507 Bacteria 8239
100 nmdc:mga05p37_19673_c1 3300050507 Bacteria 8169
101 nmdc:mga05p37_3038_c1 3300050507 Bacteria 19477
102 nmdc:mga05p37_7415_c1 3300050507 Bacteria 12940
103 nmdc:mga09592_2548_c1 3300050508 Bacteria 14745
104 nmdc:mga09592_62928_c1 3300050508 Bacteria 3139
105 nmdc:mga06r32_295586_c1 3300050510 Bacteria 1606

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037418 Ga0395900_0310898 Ga0395900_0310898_259_1539 388
2 3300036712 Ga0316584_0029038 Ga0316584_0029038_2452_3624 389
3 3300049582 Ga0501048_0205192 Ga0501048_0205192_149_1333 394
4 3300038443 Ga0395901_0096926 Ga0395901_0096926_1088_2416 397
5 3300044712 Ga0453684_0029059 Ga0453684_0029059_53_1375 397
6 3300005983 Ga0081540_1002481 Ga0081540_100248112 399
7 3300044712 Ga0453684_0388442 Ga0453684_0388442_13_1353 414
8 3300044712 Ga0453684_0192190 Ga0453684_0192190_20_1462 415
9 3300006237 Ga0097621_100023775 Ga0097621_1000237753 420
10 3300013296 Ga0157374_10000047 Ga0157374_1000004752 420
11 3300014969 Ga0157376_10004643 Ga0157376_100046433 420
12 3300005937 Ga0081455_10043405 Ga0081455_100434054 422
13 3300042876 Ga0451577_0183144 Ga0451577_0183144_359_1678 422
14 3300044712 Ga0453684_0017099 Ga0453684_0017099_4878_6200 425
15 3300031251 Ga0265327_10067468 Ga0265327_100674681 427
16 3300039062 Ga0400483_093462 Ga0400483_093462_11593_12888 428
17 3300039062 Ga0400483_148730 Ga0400483_148730_7814_9109 428
18 3300039062 Ga0400483_259015 Ga0400483_259015_62_1357 428
19 3300031456 Ga0307513_10255705 Ga0307513_102557051 429
20 3300049571 Ga0501034_0018012 Ga0501034_0018012_3688_4986 429
21 3300044712 Ga0453684_0133987 Ga0453684_0133987_1578_2912 433
22 3300038443 Ga0395901_0009771 Ga0395901_0009771_7020_8342 435
23 3300042876 Ga0451577_0224310 Ga0451577_0224310_287_1636 435
24 3300044712 Ga0453684_0140167 Ga0453684_0140167_650_1999 435
25 3300044673 Ga0453683_0013019 Ga0453683_0013019_3687_5066 436
26 3300005329 Ga0070683_100058841 Ga0070683_1000588414 439
27 3300005535 Ga0070684_100056497 Ga0070684_1000564972 439
28 3300005518 Ga0070699_100003138 Ga0070699_10000313812 440
29 3300006847 Ga0075431_100126200 Ga0075431_1001262003 440
30 3300006880 Ga0075429_100049471 Ga0075429_1000494712 440
31 3300009147 Ga0114129_10000912 Ga0114129_1000091210 440
32 3300044673 Ga0453683_0000229 Ga0453683_0000229_16069_17454 440
33 3300044673 Ga0453683_0002932 Ga0453683_0002932_6104_7426 440
34 3300045051 Ga0451576_0066569 Ga0451576_0066569_2337_3722 440
35 3300050507 nmdc:mga05p37_3038_c1 nmdc:mga05p37_3038_c1_5856_7178 440
36 3300050510 nmdc:mga06r32_295586_c1 nmdc:mga06r32_295586_c1_69_1391 440
37 3300005295 Ga0065707_10100598 Ga0065707_101005982 441
38 3300005617 Ga0068859_100231256 Ga0068859_1002312562 441
39 3300006931 Ga0097620_100231263 Ga0097620_1002312632 441
40 3300031665 Ga0316575_10007572 Ga0316575_100075722 441
41 3300035398 Ga0316574_0001688 Ga0316574_0001688_5096_6421 441
42 3300044673 Ga0453683_0041976 Ga0453683_0041976_235_1560 441
43 3300044673 Ga0453683_0154355 Ga0453683_0154355_37_1362 441
44 3300044712 Ga0453684_0038791 Ga0453684_0038791_4563_5888 441
45 3300042876 Ga0451577_0076578 Ga0451577_0076578_1259_2587 442
46 3300042876 Ga0451577_0176422 Ga0451577_0176422_465_1805 442
47 3300044673 Ga0453683_0019356 Ga0453683_0019356_306_1634 442
48 3300044712 Ga0453684_0000157 Ga0453684_0000157_216759_218087 442
49 3300044712 Ga0453684_0054757 Ga0453684_0054757_2752_4080 442
50 3300044712 Ga0453684_0069807 Ga0453684_0069807_1344_2687 442
51 3300045051 Ga0451576_0004720 Ga0451576_0004720_5229_6569 442
52 3300045051 Ga0451576_0085824 Ga0451576_0085824_1618_2946 442
53 3300050507 nmdc:mga05p37_110733_c1 nmdc:mga05p37_110733_c1_1432_2763 443
54 3300039093 Ga0400489_73490 Ga0400489_73490_10044_11384 444
55 3300044712 Ga0453684_0023147 Ga0453684_0023147_31_1365 444
56 3300042876 Ga0451577_0002977 Ga0451577_0002977_364_1701 445
57 3300044673 Ga0453683_0005961 Ga0453683_0005961_650_1987 445
58 3300044712 Ga0453684_0007401 Ga0453684_0007401_16695_18032 445
59 3300044712 Ga0453684_0054850 Ga0453684_0054850_2979_4316 445
60 3300045051 Ga0451576_0044780 Ga0451576_0044780_2292_3629 445
61 3300005295 Ga0065707_10087361 Ga0065707_100873614 446
62 3300044712 Ga0453684_0000271 Ga0453684_0000271_117879_119231 446
63 3300045051 Ga0451576_0002905 Ga0451576_0002905_3892_5265 446
64 3300044712 Ga0453684_0008162 Ga0453684_0008162_1743_3089 447
65 3300044712 Ga0453684_0196994 Ga0453684_0196994_923_2269 447
66 3300005289 Ga0065704_10000486 Ga0065704_100004867 448
67 3300005295 Ga0065707_10000535 Ga0065707_100005356 448
68 3300005295 Ga0065707_10002920 Ga0065707_1000292011 448
69 3300005295 Ga0065707_10084761 Ga0065707_100847615 448
70 3300005467 Ga0070706_100200687 Ga0070706_1002006872 448
71 3300005471 Ga0070698_100019891 Ga0070698_1000198912 448
72 3300005471 Ga0070698_100043358 Ga0070698_1000433582 448
73 3300005617 Ga0068859_100090850 Ga0068859_1000908501 448
74 3300005844 Ga0068862_100008774 Ga0068862_1000087742 448
75 3300006844 Ga0075428_100063200 Ga0075428_1000632005 448
76 3300006880 Ga0075429_100011345 Ga0075429_1000113455 448
77 3300006880 Ga0075429_100162681 Ga0075429_1001626812 448
78 3300006931 Ga0097620_100090851 Ga0097620_1000908511 448
79 3300009147 Ga0114129_10026236 Ga0114129_100262367 448
80 3300009147 Ga0114129_10182548 Ga0114129_101825483 448
81 3300025910 Ga0207684_10171149 Ga0207684_101711492 448
82 3300028380 Ga0268265_10039635 Ga0268265_100396353 448
83 3300028380 Ga0268265_10086233 Ga0268265_100862332 448
84 3300028577 Ga0265318_10005275 Ga0265318_100052757 448
85 3300031235 Ga0265330_10044051 Ga0265330_100440512 448
86 3300031240 Ga0265320_10026990 Ga0265320_100269903 448
87 3300031247 Ga0265340_10019044 Ga0265340_100190442 448
88 3300031250 Ga0265331_10018792 Ga0265331_100187922 448
89 3300042876 Ga0451577_0005780 Ga0451577_0005780_6074_7462 448
90 3300042876 Ga0451577_0016577 Ga0451577_0016577_487_1857 448
91 3300042876 Ga0451577_0185803 Ga0451577_0185803_154_1500 448
92 3300044712 Ga0453684_0000095 Ga0453684_0000095_176993_178363 448
93 3300044712 Ga0453684_0006346 Ga0453684_0006346_15026_16399 448
94 3300044712 Ga0453684_0027034 Ga0453684_0027034_5372_6760 448
95 3300044712 Ga0453684_0038000 Ga0453684_0038000_4277_5623 448
96 3300044712 Ga0453684_0042935 Ga0453684_0042935_2175_3524 448
97 3300044712 Ga0453684_0044547 Ga0453684_0044547_4328_5674 448
98 3300044712 Ga0453684_0049355 Ga0453684_0049355_1648_2994 448
99 3300045051 Ga0451576_0009324 Ga0451576_0009324_6376_7722 448
100 3300045051 Ga0451576_0023460 Ga0451576_0023460_1420_2766 448
101 3300050507 nmdc:mga05p37_19333_c1 nmdc:mga05p37_19333_c1_812_2158 448
102 3300050507 nmdc:mga05p37_19673_c1 nmdc:mga05p37_19673_c1_1730_3076 448
103 3300050507 nmdc:mga05p37_7415_c1 nmdc:mga05p37_7415_c1_1840_3240 448
104 3300050508 nmdc:mga09592_2548_c1 nmdc:mga09592_2548_c1_2876_4222 448
105 3300050508 nmdc:mga09592_62928_c1 nmdc:mga09592_62928_c1_1666_3012 448

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00815

Histidinol_dh

Histidinol dehydrogenase

38

462

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6an0-assembly1.cif.gz_A-2 crystal structure of histidinol dehydrogenase from elizabethkingia anophelis 0.9244 2 445
4g09-assembly1.cif.gz_A-2 the crystal structure of the c366s mutant of hdh from brucella suis in complex with a substituted benzyl ketone 0.9178 26 444
4g07-assembly1.cif.gz_A-2 the crystal structure of the c366s mutant of hdh from brucella suis 0.9146 26 444
1kar-assembly1.cif.gz_B l-histidinol dehydrogenase (hisd) structure complexed with histamine (inhibitor), zinc and nad (cofactor) 0.906 3 448
5vld-assembly1.cif.gz_A crystal structure of medicago truncatula l-histidinol dehydrogenase in complex with l-histidine and nad+ 0.9057 1 446
ID Description Score Start End Superfamily
af_P9WNW9_250_396_3.40.50.1980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.9775 250 395 3.40.50.1980
1k75B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.9761 252 395 3.40.50.1980
4gicB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.9744 250 366 3.40.50.1980
af_P9WNW9_250_396_3.40.50.1980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.9645 250 395 3.40.50.1980
af_Q2FUT8_220_366_3.40.50.1980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.9609 250 395 3.40.50.1980
ID Description Score Start End GO Terms
AF-A0A3D4I2N2-F1-model_v4 Histidinol dehydrogenase 0.9854 270 400 GO:0000105
GO:0004399
GO:0005829
GO:0046872
GO:0051287
AF-A0A357D169-F1-model_v4 Histidinol dehydrogenase 0.983 250 350 GO:0000105
GO:0004399
GO:0005829
GO:0046872
GO:0051287
AF-A0A1W9PT22-F1-model_v4 Histidinol dehydrogenase 0.9789 213 399 GO:0000105
GO:0004399
GO:0005829
GO:0046872
GO:0051287
AF-A0A7S2H7V4-F1-model_v4 histidinol dehydrogenase (EC 1.1.1.23) 0.9788 245 350 GO:0000105
GO:0004399
GO:0005829
GO:0046872
GO:0051287
AF-A0A0L8QTQ1-F1-model_v4 deleted 0.9779 192 390

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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