F023069

General Info

Members Datasets Scaffolds Average Seq Length
103 81 206 287

Family's Representative Sequence

Representative Sequence 3300049578|Ga0501042_0182033|Ga0501042_0182033_38_1012
Length 324
Sequence VVDDPAVQGGDVMSGRLPALAGRGNGIHGGSWGARAVKWTCIGITLLFVLVFLVLPLCSVFYEALRPVRPAFMPDEGDPTTAVGWYWAALKDPNSLHAIKMTLLTAGIAVPFNTIFGIAAAWAIAKFNFRGKSLLITIIDIPFAVSPVISGLIFVLLFGRSGLFGPWLIAHGVKIIFALPGMVLATIFVTFPFVARELIPLMQEQGTQEEQAAISLGASGWQTFWKITLPNIKWGLLYGVILCNARAMGEFGAVSVVTQNLPGETNTLPRETEYLYSNYGGLGMRGAFALSSVLAMLGLITLIAKSLLEWKIRRDLESATEGAA

Samples

Sample ID Description Type Environment
1 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
9 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
10 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
11 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
12 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
13 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
16 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
17 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
18 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
20 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
21 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
22 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
23 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
24 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
25 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
26 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
36 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
37 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
38 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
39 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
40 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
41 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
42 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
43 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
44 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
45 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
46 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
47 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
48 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
49 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
50 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
51 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
52 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
53 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
54 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
55 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
56 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
57 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
58 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
70 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
71 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
73 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
74 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
75 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
76 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
77 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
78 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
79 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
80 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
81 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 95.15
Metatranscriptomes 0
Isolates 4.85

Biome Distribution

Category Percentage (%)
Aerial Root 1.94
Bulb 0
Endosphere 4.85
Nodule 0
Rhizoplane 2.91
Rhizosphere 86.41
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501042_0182033 3300049578 Bacteria 1516
2 Ga0070658_10105589 3300005327 Bacteria 2330
3 Ga0070658_10181985 3300005327 Bacteria 1769
4 Ga0070690_100102316 3300005330 Bacteria 1901
5 Ga0070670_100198500 3300005331 Bacteria 1743
6 Ga0070689_100142376 3300005340 Bacteria 1929
7 Ga0070661_100098728 3300005344 Bacteria 2169
8 Ga0070713_100022725 3300005436 Bacteria 4851
9 Ga0070713_100330358 3300005436 Bacteria 1410
10 Ga0068855_100027972 3300005563 Bacteria 6744
11 Ga0081540_1004788 3300005983 Bacteria 10206
12 Ga0075365_10080415 3300006038 Bacteria 2206
13 Ga0075363_100045853 3300006048 Bacteria 2318
14 Ga0075362_10103696 3300006177 Bacteria 1332
15 Ga0097621_100005816 3300006237 Bacteria 8709
16 Ga0075428_100001597 3300006844 Bacteria 24224
17 Ga0075428_100656156 3300006844 Bacteria 1119
18 Ga0075430_100123095 3300006846 Bacteria 2162
19 Ga0099795_10033607 3300007788 Bacteria 1782
20 Ga0105240_10012400 3300009093 Bacteria 11768
21 Ga0111539_10029887 3300009094 Bacteria 6628
22 Ga0105248_10225436 3300009177 Bacteria 2110
23 Ga0105249_10327305 3300009553 Bacteria 1545
24 Ga0163162_10269616 3300013306 Bacteria 1834
25 Ga0163163_10000021 3300014325 Bacteria 191799
26 Ga0157379_10004679 3300014968 Bacteria 11746
27 Ga0163161_10134599 3300017792 Bacteria 1867
28 Ga0213872_10052255 3300021361 Bacteria 1854
29 Ga0213872_10056913 3300021361 Bacteria 1771
30 Ga0207705_10335608 3300025909 Bacteria 1163
31 Ga0207695_10031076 3300025913 Bacteria 5867
32 Ga0207652_10076359 3300025921 Bacteria 2922
33 Ga0207700_10367811 3300025928 Bacteria 1255
34 Ga0207686_10221164 3300025934 Bacteria 1367
35 Ga0207711_10398101 3300025941 Bacteria 1279
36 Ga0207667_10020423 3300025949 Bacteria 7367
37 Ga0207641_10582913 3300026088 Bacteria 1093
38 Ga0207683_10011278 3300026121 Bacteria 7619
39 Ga0265323_10009920 3300028653 Bacteria 3873
40 Ga0265338_10055473 3300028800 Bacteria 3524
41 Ga0265338_10310613 3300028800 Bacteria 1144
42 Ga0265332_10025587 3300031238 Bacteria 2591
43 Ga0265325_10004056 3300031241 Bacteria 9340
44 Ga0265339_10016449 3300031249 Bacteria 4408
45 Ga0265327_10031501 3300031251 Bacteria 2978
46 Ga0265327_10069539 3300031251 Bacteria 1767
47 Ga0265316_10062804 3300031344 Bacteria 2882
48 Ga0265316_10079061 3300031344 Bacteria 2524
49 Ga0307513_10319865 3300031456 Bacteria 1310
50 Ga0307408_100249843 3300031548 Bacteria 1462
51 Ga0265313_10003730 3300031595 Bacteria 12118
52 Ga0307406_10250999 3300031901 Bacteria 1333
53 Ga0307412_10118547 3300031911 Bacteria 1902
54 Ga0307416_100176846 3300032002 Bacteria 1995
55 Ga0395900_0225591 3300037418 Bacteria 1886
56 Ga0395898_0048909 3300037466 Bacteria 4145
57 Ga0395898_0052789 3300037466 Bacteria 3971
58 Ga0395901_0022011 3300038443 Bacteria 6534
59 Ga0436361_0421520 3300039447 Bacteria 3999
60 Ga0436361_0825985 3300039447 Bacteria 2035
61 Ga0451800_0803591 3300041459 Bacteria 1920
62 Ga0451577_0000479 3300042876 Bacteria 68148
63 Ga0453684_0000941 3300044712 Bacteria 96005
64 Ga0453684_0002411 3300044712 Bacteria 45566
65 Ga0453684_0058820 3300044712 Bacteria 4961
66 Ga0451576_0001625 3300045051 Bacteria 37674
67 Ga0496107_0405204 3300048910 Bacteria 1014
68 Ga0496113_0421673 3300048916 Bacteria 1072
69 Ga0501032_0021520 3300049569 Bacteria 4482
70 Ga0501032_0070036 3300049569 Bacteria 2340
71 Ga0501033_0261150 3300049570 Bacteria 1226
72 Ga0501034_0000310 3300049571 Bacteria 86250
73 Ga0501034_0076927 3300049571 Bacteria 3344
74 Ga0501036_0093977 3300049572 Bacteria 2534
75 Ga0501037_0002111 3300049573 Bacteria 14398
76 Ga0501038_0000182 3300049574 Bacteria 53710
77 Ga0501039_0029809 3300049575 Bacteria 4204
78 Ga0501043_0001510 3300049579 Bacteria 20293
79 Ga0501046_0000323 3300049580 Bacteria 48041
80 Ga0501047_0028866 3300049581 Bacteria 5351
81 Ga0501047_0033617 3300049581 Bacteria 4949
82 Ga0501047_0064992 3300049581 Bacteria 3518
83 Ga0501047_0384935 3300049581 Bacteria 1237
84 Ga0501048_0013215 3300049582 Bacteria 6126
85 Ga0501080_0362179 3300049742 Bacteria 1308
86 Ga0501080_0448729 3300049742 Bacteria 1156
87 Ga0501083_0000018 3300049744 Bacteria 154637
88 Ga0501035_0026951 3300049822 Bacteria 5255
89 Ga0501035_0034243 3300049822 Bacteria 4616
90 Ga0501035_0146975 3300049822 Bacteria 2047
91 Ga0501044_0007858 3300049823 Bacteria 11729
92 Ga0501044_0087652 3300049823 Bacteria 3144
93 Ga0501044_0112474 3300049823 Bacteria 2730
94 Ga0501044_0378979 3300049823 Bacteria 1330
95 nmdc:mga03683_23684_c1 3300050489 Bacteria 2395
96 nmdc:mga0qj67_103984_c1 3300050509 Bacteria 2291
97 nmdc:mga08y16_48612_c1 3300050511 Bacteria 4439
98 Ga0500637_0028570 3300053178 Bacteria 3086
99 2739348711 2738543031 Bacteria 5769731
100 2894513666 2894510363 Bacteria 5121143
101 2977259310 2977254563 Bacteria 4828420
102 2984528409 2984527788 Bacteria 5288478
103 2984534516 2984532647 Bacteria 5288506
104 Ga0501042_0182033
105 Ga0070658_10105589
106 Ga0070658_10181985
107 Ga0070690_100102316
108 Ga0070670_100198500
109 Ga0070689_100142376
110 Ga0070661_100098728
111 Ga0070713_100022725
112 Ga0070713_100330358
113 Ga0068855_100027972
114 Ga0081540_1004788
115 Ga0075365_10080415
116 Ga0075363_100045853
117 Ga0075362_10103696
118 Ga0097621_100005816
119 Ga0075428_100001597
120 Ga0075428_100656156
121 Ga0075430_100123095
122 Ga0099795_10033607
123 Ga0105240_10012400
124 Ga0111539_10029887
125 Ga0105248_10225436
126 Ga0105249_10327305
127 Ga0163162_10269616
128 Ga0163163_10000021
129 Ga0157379_10004679
130 Ga0163161_10134599
131 Ga0213872_10052255
132 Ga0213872_10056913
133 Ga0207705_10335608
134 Ga0207695_10031076
135 Ga0207652_10076359
136 Ga0207700_10367811
137 Ga0207686_10221164
138 Ga0207711_10398101
139 Ga0207667_10020423
140 Ga0207641_10582913
141 Ga0207683_10011278
142 Ga0265323_10009920
143 Ga0265338_10055473
144 Ga0265338_10310613
145 Ga0265332_10025587
146 Ga0265325_10004056
147 Ga0265339_10016449
148 Ga0265327_10031501
149 Ga0265327_10069539
150 Ga0265316_10062804
151 Ga0265316_10079061
152 Ga0307513_10319865
153 Ga0307408_100249843
154 Ga0265313_10003730
155 Ga0307406_10250999
156 Ga0307412_10118547
157 Ga0307416_100176846
158 Ga0395900_0225591
159 Ga0395898_0048909
160 Ga0395898_0052789
161 Ga0395901_0022011
162 Ga0436361_0421520
163 Ga0436361_0825985
164 Ga0451800_0803591
165 Ga0451577_0000479
166 Ga0453684_0000941
167 Ga0453684_0002411
168 Ga0453684_0058820
169 Ga0451576_0001625
170 Ga0496107_0405204
171 Ga0496113_0421673
172 Ga0501032_0021520
173 Ga0501032_0070036
174 Ga0501033_0261150
175 Ga0501034_0000310
176 Ga0501034_0076927
177 Ga0501036_0093977
178 Ga0501037_0002111
179 Ga0501038_0000182
180 Ga0501039_0029809
181 Ga0501043_0001510
182 Ga0501046_0000323
183 Ga0501047_0028866
184 Ga0501047_0033617
185 Ga0501047_0064992
186 Ga0501047_0384935
187 Ga0501048_0013215
188 Ga0501080_0362179
189 Ga0501080_0448729
190 Ga0501083_0000018
191 Ga0501035_0026951
192 Ga0501035_0034243
193 Ga0501035_0146975
194 Ga0501044_0007858
195 Ga0501044_0087652
196 Ga0501044_0112474
197 Ga0501044_0378979
198 nmdc:mga03683_23684_c1
199 nmdc:mga0qj67_103984_c1
200 nmdc:mga08y16_48612_c1
201 Ga0500637_0028570
202 2739348711
203 2894513666
204 2977259310
205 2984528409
206 2984534516

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

113

314

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4jbw-assembly2.cif.gz_H crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.788 55 229
4jbw-assembly1.cif.gz_F crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.7633 55 229
3rlf-assembly1.cif.gz_F crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to mgamppnp 0.7583 55 229
3pv0-assembly1.cif.gz_F crystal structure of a pre-translocation state mbp-maltose transporter complex without nucleotide 0.7372 55 229
3d31-assembly1.cif.gz_C modbc from methanosarcina acetivorans 0.7077 23 270
ID Description Score Start End Superfamily
af_P71746_10_267_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7647 31 269 1.10.3720.10
af_P71745_27_277_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7641 29 267 1.10.3720.10
3puzF04 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7532 62 229 1.10.3720.10
af_P9WG13_10_255_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.739 28 269 1.10.3720.10
af_P0AEB0_20_277_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7382 27 280 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A257X9A8-F1-model_v4 Sulfate ABC transporter permease subunit CysW 0.887 18 222 GO:0005886
GO:0015419
AF-A0A531L681-F1-model_v4 Sulfate transport system permease protein CysT 0.8828 31 223 GO:0005886
GO:0015419
AF-A0A4Q3TCD8-F1-model_v4 Sulfate ABC transporter permease 0.8801 17 229 GO:0005886
GO:0015419
AF-A4U498-F1-model_v4 Protein-dependent transport systems 0.8761 16 228 GO:0005886
GO:0015419
AF-A0A1G5ZT84-F1-model_v4 deleted 0.8698 18 222

Map