F454954

General Info

Members Datasets Scaffolds Average Seq Length
496 269 367 305

Family's Representative Sequence

Representative Sequence 3300048925|Ga0496122_0000902|Ga0496122_0000902_25436_26407
Length 323
Sequence MGAHAPIFYYWLVTMTDAQPLSRTQAWLESLRPKTLPLAFAAIVVGTTLAWWQGFFDPLVAILALSTAGLLQILSNLANDYGDAVKGSDKPDRIGPLRGMQKGAISLEQMKRALIIVIGLSCISGLLLLLAASQTLTDFIGFVVLGALSIIAAITYTIGKRPYGYIGLGDVSVLIFFGWLSVMGSWYLQTHMLIPAIILPATACGLLATAVLNINNLRDIDSDRANGKITLVVRLGPVNARRYHAGLLAGALLCLALFNLLSLHSVWGWLFILAAPLLLKQARFVMRERDPKAMPPMLERTVKGALLTNLLFVIGIMLSQTHF

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
3 2506520008 Serratia plymuthica AS12 Isolate Unclassified
4 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
5 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
6 2547132181 Kosakonia sacchari SP1 Isolate Stem
7 2547132416 Enterobacter sp. MR1 Isolate Rhizoplane
8 2554235234 Klebsiella michiganensis SA2 Isolate Unclassified
9 2561511199 Enterobacter sp. R4-368 Isolate Nodule
10 2599185169 Klebsiella quasipneumoniae NFPP35 Isolate Rhizoplane
11 2600255254 Klebsiella quasipneumoniae NFIX15 Isolate Rhizoplane
12 2600255255 Klebsiella quasipneumoniae NFIX23 Isolate Rhizoplane
13 2600255256 Enterobacter sp. NFIX08 Isolate Rhizoplane
14 2600255257 Enterobacter sp. NFIX03 Isolate Rhizoplane
15 2600255280 Klebsiella quasipneumoniae NFIX42 Isolate Rhizoplane
16 2600255281 Klebsiella quasipneumoniae NFIX43 Isolate Rhizoplane
17 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
18 2600255288 Klebsiella quasipneumoniae NFIX14 Isolate Rhizoplane
19 2600255289 Klebsiella quasipneumoniae NFIX16 Isolate Rhizoplane
20 2600255290 Klebsiella quasipneumoniae NFIX17 Isolate Rhizoplane
21 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
22 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
23 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
24 2600255300 Klebsiella quasipneumoniae NFIX30 Isolate Rhizoplane
25 2600255301 Klebsiella quasipneumoniae NFIX33 Isolate Rhizoplane
26 2600255302 Klebsiella quasipneumoniae NFIX35 Isolate Rhizoplane
27 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
28 2600255304 Klebsiella quasipneumoniae NFIX37 Isolate Rhizoplane
29 2600255305 Klebsiella quasipneumoniae NFIX41 Isolate Rhizoplane
30 2600255306 Klebsiella quasipneumoniae NFIX44 Isolate Rhizoplane
31 2600255307 Klebsiella quasipneumoniae NFIX56 Isolate Rhizoplane
32 2600255309 Klebsiella sp. NFIX53 Isolate Rhizoplane
33 2600255310 Enterobacter sp. NFIX06 Isolate Rhizoplane
34 2600255311 Enterobacter sp. NFIX04 Isolate Rhizoplane
35 2600255392 Klebsiella quasipneumoniae NFIX54 Isolate Rhizoplane
36 2602042046 Enterobacter sp. NFIX09 Isolate Rhizoplane
37 2602042047 Enterobacter sp. NFIX59 Isolate Rhizoplane
38 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
39 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
40 2602042066 Enterobacter sp. NFIX45 Isolate Rhizoplane
41 2602042067 Enterobacter sp. NFIX58 Isolate Rhizoplane
42 2602042103 Klebsiella quasipneumoniae NFIX29 Isolate Rhizoplane
43 2602042104 Klebsiella quasipneumoniae NFIX26 Isolate Rhizoplane
44 2602042105 Klebsiella quasipneumoniae NFIX25 Isolate Rhizoplane
45 2602042106 Klebsiella quasipneumoniae NFIX13 Isolate Rhizoplane
46 2602042109 Klebsiella aerogenes NFIX39 Isolate Rhizoplane
47 2602042110 Klebsiella quasipneumoniae NFIX40 Isolate Rhizoplane
48 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
49 2603880178 Klebsiella quasipneumoniae NFIX34 Isolate Rhizoplane
50 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
51 2603880202 Klebsiella quasipneumoniae NFIX38 Isolate Rhizoplane
52 2603880211 Klebsiella quasipneumoniae NFIX24 Isolate Rhizoplane
53 2609459761 Enterobacter sp. NFR05 Isolate Rhizoplane
54 2636415599 Klebsiella variicola DX120E Isolate Unclassified
55 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
56 2667528172 Enterobacteriaceae bacterium NFIX31 Isolate Rhizoplane
57 2667528173 Rahnella sp. NFIX50 Isolate Rhizoplane
58 2671180115 Cedecea sp. NFIX57 Isolate Rhizoplane
59 2675903046 Klebsiella quasipneumoniae NFIX52 Isolate Rhizoplane
60 2681812866 Enterobacter asburiae NFIX55 Isolate Rhizoplane
61 2681812869 Enterobacter ludwigii NFPP41 Isolate Rhizoplane
62 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
63 2706794495 Dickeya zeae ZJU1202 Isolate Unclassified
64 2711768156 Atlantibacter hermannii DDE1 Isolate Unclassified
65 2751185917 Enterobacter sp. HK169 Isolate Unclassified
66 2765235842 Enterobacter ludwigii AA4 Isolate Unclassified
67 2772190666 Serratia surfactantfaciens YD25 Isolate Unclassified
68 2775506706 Enterobacter asburiae 1216 Isolate Unclassified
69 2775507074 Klebsiella sp. D5A Isolate Unclassified
70 2791354903 Mangrovibacter phragmitis MP23 Isolate Unclassified
71 2791355010 Kosakonia pseudosacchari NN143 Isolate Unclassified
72 2791355275 Enterobacter sp. Sa187 Isolate Unclassified
73 2806310673 Serratia quinivorans NCTC 13189 Isolate Rhizosphere
74 2814123068 Kosakonia radicincitans GXGL-4A Isolate Rhizosphere
75 2821118458 Enterobacter asburiae 609 Isolate Unclassified
76 2823373977 Enterobacter ludwigii NCR3 Isolate Rhizosphere
77 2844425489 Enterobacter cloacae SBP-8 Isolate Rhizosphere
78 2846540461 Photorhabdus luminescens HIM3 Isolate Rhizosphere
79 2847085930 Erwinia persicina B64 Isolate Bulb
80 2852103415 Edaphovirga cremea DSM 105170 Isolate Rhizosphere
81 2854601825 Dickeya dianthicola SS70 Isolate Stem Tuber
82 2855195626 Pectobacterium atrosepticum SS26 Isolate Stem Tuber
83 2858466076 Pectobacterium polaris SS28 Isolate Stem Tuber
84 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
85 2871272651 Pectobacterium carotovorum SS96 Isolate Stem Tuber
86 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
87 2884086401 Kluyvera sp. PO2S7 Isolate Rhizosphere
88 2888366609 Serratia sp. NGAS9 Isolate Rhizosphere
89 2891670763 Buttiauxella sp. B2 Isolate Rhizosphere
90 2900051742 Pectobacterium zantedeschiae 2M Isolate Stem Tuber
91 2904474040 Rahnella aquatilis 4485 Isolate Rhizosphere
92 2904513164 Klebsiella variicola 1431 Isolate Rhizosphere
93 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere
94 2919108558 Klebsiella sp. 1400 Isolate Rhizosphere
95 2919150387 Rahnella aceris 1817 Isolate Unclassified
96 2923634449 Enterobacter kobei SLBN-76 Isolate Rhizosphere
97 2927143783 Rahnella sp. 2050 Isolate Unclassified
98 2927833300 Enterobacter sp. SLBN-59 Isolate Rhizosphere
99 2932406140 Serratia sp. 2723 Isolate Rhizosphere
100 2935625433 Kosakonia sp. 1610 Isolate Rhizosphere
101 2937539931 Pantoea sp. LS15 Isolate Unclassified
102 2937967321 Serratia sp. YC16 Isolate Unclassified
103 2939568625 Lelliottia sp. 489 Isolate Rhizosphere
104 2939573065 Citrobacter sp. 506 Isolate Rhizosphere
105 2939577877 Serratia sp. 509 Isolate Rhizosphere
106 2939607340 Leclercia sp. 1548 Isolate Rhizosphere
107 2939617950 Kosakonia cowanii 2056 Isolate Rhizosphere
108 2939642701 Lelliottia nimipressuralis 2756 Isolate Rhizosphere
109 2945874760 Phytobacter diazotrophicus UAEU22 Isolate Rhizosphere
110 2969079654 Klebsiella variicola E57-7 Isolate Unclassified
111 2971820967 Klebsiella sp. MPUS7 Isolate Rhizosphere
112 2974310843 Enterobacter sp. SORGH_AS 287 Isolate Unclassified
113 2974435778 Kosakonia cowanii SORGH_AS 304 Isolate Unclassified
114 2984559226 Klebsiella variicola SORGH_AS834 Isolate Aerial Root
115 2984595703 Klebsiella variicola SORGH_AS1070 Isolate Aerial Root
116 3000376612 Enterobacteriaceae bacterium 4M9 Isolate Rhizosphere
117 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
118 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
119 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
120 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
121 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
122 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
123 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
124 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
125 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
126 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
127 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
128 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
129 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
130 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
131 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
132 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
133 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
134 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
135 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
136 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
137 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
138 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
139 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
140 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
141 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
142 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
143 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
144 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
145 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
146 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
147 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
148 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
149 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
150 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
151 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
152 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
153 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
154 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
155 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
156 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
157 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
158 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
159 3300015679 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.4_F08 Metagenome Unclassified
160 3300015680 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.2_H03 Metagenome Rhizosphere
161 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
162 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
163 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
164 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
165 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
166 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
167 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
168 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
169 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
170 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
171 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
172 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
173 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
174 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
175 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
176 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
177 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
178 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
179 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
180 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
181 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
182 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
183 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
184 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
185 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
186 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
187 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
188 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
189 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
190 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
191 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
192 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
193 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
194 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
195 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
196 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
197 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
198 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
199 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
200 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
201 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
202 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
203 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
204 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
205 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
206 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
207 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
208 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
209 3300044669 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2E Metagenome Unclassified
210 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
211 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
212 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
213 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
214 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
215 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
216 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
217 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
218 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
219 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
220 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
221 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
222 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
223 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
224 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
225 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
226 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
227 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
228 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
229 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
230 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
231 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
232 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
233 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
234 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
235 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
236 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
237 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
238 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
239 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
240 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
241 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
242 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
243 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
244 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
245 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
246 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
247 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
248 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
249 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
250 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
251 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
252 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
253 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
254 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
255 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
256 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
257 640753048 Serratia proteamaculans 568 Isolate Endosphere
258 8004592986 Serratia sp. S119 Isolate Unclassified
259 8015394850 Serratia sp. PGPR-27 Isolate Rhizosphere
260 8018221730 Enterobacter sp. CM29 Isolate Unclassified
261 8018405270 Enterobacter sp. 198 Isolate Rhizosphere
262 8019504834 Atlantibacter hermannii 1903 Isolate Rhizosphere
263 8054844752 Dryocola boscaweniae H18W14 Isolate Rhizosphere
264 8054849141 Dryocola clanedunensis H11S18 Isolate Rhizosphere
265 8055087960 Silvania hatchlandensis H19S6 Isolate Rhizosphere
266 8055092621 Silvania confinis H4N4 Isolate Rhizosphere
267 8055097453 Leclercia tamurae H6W5 Isolate Rhizosphere
268 8055693939 Hafnia alvei A23BA Isolate Rhizosphere
269 8057304971 Scandinavium manionii H17S15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.99
Metatranscriptomes 0
Isolates 26.01

Biome Distribution

Category Percentage (%)
Aerial Root 0.4
Bulb 0.2
Endosphere 5.85
Nodule 4.44
Rhizoplane 12.1
Rhizosphere 49.19
Stem 0.2
Stem Tuber 1.21
Unclassified 26.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1110011 2162886007 Bacteria 5609
2 SwRhRL2b_contig_1610885 2162886007 Bacteria 1665
3 SwRhRL2b_contig_2175305 2162886007 Bacteria 2304
4 SwRhRL2b_contig_3862299 2162886007 Bacteria 1653
5 JGI25163J39215_1000213 3300002771 Bacteria 21872
6 JGI25164J39214_1000053 3300002772 Bacteria 120760
7 JGI25152J39213_1000244 3300002773 Bacteria 36300
8 rootH2_10031095 3300003320 Bacteria 14739
9 rootL2_10117321 3300003322 Bacteria 3899
10 rootL2_10339190 3300003322 Unclassified 1648
11 Ga0055538_1000056 3300003751 Bacteria 120760
12 Ga0055539_1000084 3300003752 Bacteria 120760
13 Ga0055533_1000090 3300003756 Bacteria 120760
14 Ga0055525_1000116 3300003759 Bacteria 120760
15 Ga0055531_10000328 3300003794 Bacteria 46932
16 Ga0055541_1000058 3300003841 Bacteria 120760
17 Ga0058692_1002170 3300003856 Bacteria 6705
18 Ga0058692_1010627 3300003856 Bacteria 2267
19 Ga0058692_1014885 3300003856 Bacteria 1768
20 Ga0065165_1026240 3300005262 Bacteria 1920
21 Ga0065704_10000082 3300005289 Bacteria 39544
22 Ga0065704_10000573 3300005289 Bacteria 16809
23 Ga0065704_10001643 3300005289 Bacteria 8469
24 Ga0065704_10001824 3300005289 Bacteria 7948
25 Ga0065704_10009239 3300005289 Bacteria 2999
26 Ga0065704_10075587 3300005289 Bacteria 5515
27 Ga0070659_100033704 3300005366 Bacteria 3980
28 Ga0070665_100000842 3300005548 Bacteria 40035
29 Ga0070665_100017023 3300005548 Bacteria 7289
30 Ga0068855_100071330 3300005563 Unclassified 4040
31 Ga0068857_100000014 3300005577 Bacteria 101897
32 Ga0068864_100228795 3300005618 Bacteria 1719
33 Ga0068851_10019208 3300005834 Bacteria 3300
34 Ga0068863_100069595 3300005841 Bacteria 3327
35 Ga0075364_10002925 3300006051 Bacteria 9624
36 Ga0075364_10013439 3300006051 Bacteria 5033
37 Ga0075366_10018747 3300006195 Bacteria 3998
38 Ga0079104_1000088 3300006946 Bacteria 134442
39 Ga0079104_1000191 3300006946 Bacteria 85701
40 Ga0079104_1000217 3300006946 Bacteria 80619
41 Ga0079104_1000964 3300006946 Bacteria 22534
42 Ga0079104_1002681 3300006946 Bacteria 9187
43 Ga0079104_1003877 3300006946 Bacteria 6695
44 Ga0079104_1009386 3300006946 Bacteria 3318
45 Ga0079104_1009388 3300006946 Bacteria 3318
46 Ga0079104_1013724 3300006946 Bacteria 2482
47 Ga0079104_1040190 3300006946 Bacteria 1097
48 Ga0079104_1040467 3300006946 Bacteria 1091
49 Ga0105251_10000615 3300009011 Bacteria 32714
50 Ga0105251_10001152 3300009011 Bacteria 22997
51 Ga0105251_10005087 3300009011 Bacteria 8705
52 Ga0105251_10005838 3300009011 Bacteria 7971
53 Ga0105251_10005856 3300009011 Bacteria 7952
54 Ga0105251_10012629 3300009011 Bacteria 4772
55 Ga0105251_10019388 3300009011 Bacteria 3595
56 Ga0105251_10024245 3300009011 Bacteria 3117
57 Ga0105251_10033599 3300009011 Bacteria 2544
58 Ga0105251_10059455 3300009011 Bacteria 1802
59 Ga0105251_10062440 3300009011 Bacteria 1750
60 Ga0105251_10115113 3300009011 Bacteria 1223
61 Ga0105244_10000143 3300009036 Bacteria 74458
62 Ga0105244_10000208 3300009036 Bacteria 60141
63 Ga0105244_10000301 3300009036 Bacteria 47910
64 Ga0105244_10000390 3300009036 Bacteria 40624
65 Ga0105244_10000472 3300009036 Bacteria 36595
66 Ga0105244_10001461 3300009036 Bacteria 19073
67 Ga0105244_10006390 3300009036 Bacteria 7646
68 Ga0105244_10011375 3300009036 Bacteria 5343
69 Ga0105244_10020370 3300009036 Bacteria 3687
70 Ga0105244_10096259 3300009036 Bacteria 1452
71 Ga0105244_10096741 3300009036 Bacteria 1448
72 Ga0105244_10097124 3300009036 Bacteria 1444
73 Ga0105250_10000115 3300009092 Bacteria 72270
74 Ga0105250_10000579 3300009092 Bacteria 24245
75 Ga0105250_10001273 3300009092 Bacteria 13857
76 Ga0105250_10002167 3300009092 Bacteria 10070
77 Ga0105250_10003368 3300009092 Bacteria 7595
78 Ga0105250_10014002 3300009092 Bacteria 3302
79 Ga0105250_10014867 3300009092 Bacteria 3192
80 Ga0105250_10039370 3300009092 Bacteria 1896
81 Ga0105240_10083450 3300009093 Bacteria 3921
82 Ga0111539_10027845 3300009094 Bacteria 6901
83 Ga0105247_10000077 3300009101 Bacteria 110623
84 Ga0105243_10000186 3300009148 Bacteria 72110
85 Ga0105243_10060340 3300009148 Bacteria 3030
86 Ga0105241_10000030 3300009174 Bacteria 123241
87 Ga0105246_10005679 3300011119 Bacteria 7614
88 Ga0157373_10004794 3300013100 Bacteria 10179
89 Ga0157373_10136354 3300013100 Bacteria 1725
90 Ga0157373_10192077 3300013100 Bacteria 1439
91 Ga0157371_10164990 3300013102 Bacteria 1582
92 Ga0157371_10385860 3300013102 Bacteria 1023
93 Ga0157370_10040993 3300013104 Bacteria 4469
94 Ga0157369_10000367 3300013105 Bacteria 60066
95 Ga0163162_10040824 3300013306 Bacteria 4641
96 Ga0157372_10000088 3300013307 Bacteria 95033
97 Ga0157372_10002665 3300013307 Bacteria 19330
98 Ga0157372_10094062 3300013307 Bacteria 3412
99 Ga0157380_10048970 3300014326 Unclassified 3331
100 Ga0182008_10001469 3300014497 Bacteria 15757
101 Ga0182006_1000071 3300015261 Bacteria 135189
102 Ga0183366_1008 3300015679 Bacteria 90953
103 Ga0183370_1008 3300015680 Bacteria 90953
104 Ga0183369_1023 3300015685 Bacteria 90953
105 Ga0183368_1011 3300015687 Bacteria 90953
106 Ga0163161_10000048 3300017792 Bacteria 125876
107 Ga0163161_10025725 3300017792 Bacteria 4167
108 Ga0213876_10000088 3300021384 Bacteria 105076
109 Ga0209760_100150 3300025207 Bacteria 42742
110 Ga0209784_100088 3300025224 Bacteria 120858
111 Ga0209566_100107 3300025225 Bacteria 120858
112 Ga0209674_100129 3300025226 Bacteria 120858
113 Ga0209563_100123 3300025230 Bacteria 120858
114 Ga0207427_100102 3300025231 Bacteria 120812
115 Ga0209437_100198 3300025233 Bacteria 120812
116 Ga0207425_1017876 3300025245 Bacteria 1549
117 Ga0209677_100080 3300025253 Bacteria 120820
118 Ga0209129_1000173 3300025258 Bacteria 95055
119 Ga0209050_1005079 3300025298 Bacteria 8497
120 Ga0209257_1000005 3300025304 Bacteria 1592528
121 Ga0207696_1000182 3300025711 Bacteria 98203
122 Ga0207696_1000227 3300025711 Bacteria 79578
123 Ga0207696_1000252 3300025711 Bacteria 70208
124 Ga0207696_1000430 3300025711 Bacteria 38318
125 Ga0207696_1000975 3300025711 Bacteria 17346
126 Ga0207696_1001329 3300025711 Bacteria 13654
127 Ga0207696_1001936 3300025711 Bacteria 10529
128 Ga0207655_1000152 3300025728 Bacteria 127480
129 Ga0207655_1000163 3300025728 Bacteria 122624
130 Ga0207655_1000182 3300025728 Bacteria 112621
131 Ga0207655_1000189 3300025728 Bacteria 109026
132 Ga0207655_1000235 3300025728 Bacteria 91445
133 Ga0207655_1000433 3300025728 Bacteria 56160
134 Ga0207655_1001855 3300025728 Bacteria 18240
135 Ga0207655_1005656 3300025728 Bacteria 8453
136 Ga0207655_1005819 3300025728 Bacteria 8285
137 Ga0207655_1025590 3300025728 Bacteria 2860
138 Ga0207655_1061708 3300025728 Bacteria 1445
139 Ga0207655_1069594 3300025728 Bacteria 1314
140 Ga0207713_1000121 3300025735 Bacteria 123284
141 Ga0207713_1000141 3300025735 Bacteria 107399
142 Ga0207713_1000165 3300025735 Bacteria 97073
143 Ga0207713_1000178 3300025735 Bacteria 91683
144 Ga0207713_1000622 3300025735 Bacteria 34766
145 Ga0207713_1005072 3300025735 Bacteria 8362
146 Ga0207713_1005430 3300025735 Bacteria 7979
147 Ga0207713_1005885 3300025735 Bacteria 7574
148 Ga0207713_1032930 3300025735 Bacteria 2270
149 Ga0207713_1042459 3300025735 Bacteria 1887
150 Ga0207713_1047874 3300025735 Bacteria 1726
151 Ga0207713_1091743 3300025735 Bacteria 1066
152 Ga0207710_10000088 3300025900 Bacteria 126094
153 Ga0207654_10000030 3300025911 Bacteria 123413
154 Ga0207695_10055199 3300025913 Bacteria 4142
155 Ga0207649_10153030 3300025920 Bacteria 1591
156 Ga0207690_10037461 3300025932 Bacteria 3149
157 Ga0207709_10001059 3300025935 Bacteria 20317
158 Ga0207667_10249993 3300025949 Unclassified 1814
159 Ga0207641_10370156 3300026088 Bacteria 1370
160 Ga0207676_10481837 3300026095 Bacteria 1175
161 Ga0207674_10000080 3300026116 Bacteria 101768
162 Ga0209281_1000176 3300027111 Bacteria 151377
163 Ga0209281_1000217 3300027111 Bacteria 125471
164 Ga0209281_1000224 3300027111 Bacteria 120450
165 Ga0209281_1000278 3300027111 Bacteria 97268
166 Ga0209281_1000407 3300027111 Bacteria 65582
167 Ga0209281_1000436 3300027111 Bacteria 61541
168 Ga0209281_1000466 3300027111 Bacteria 56992
169 Ga0209281_1001266 3300027111 Bacteria 16374
170 Ga0209281_1001718 3300027111 Bacteria 11305
171 Ga0209281_1012043 3300027111 Bacteria 1914
172 Ga0209371_1000143 3300027312 Bacteria 117814
173 Ga0209371_1000162 3300027312 Bacteria 100949
174 Ga0209371_1000252 3300027312 Bacteria 65398
175 Ga0209371_1000362 3300027312 Bacteria 49166
176 Ga0209371_1000915 3300027312 Bacteria 23280
177 Ga0209371_1003085 3300027312 Bacteria 8505
178 Ga0209371_1003642 3300027312 Bacteria 7324
179 Ga0209371_1003744 3300027312 Bacteria 7118
180 Ga0209371_1009230 3300027312 Bacteria 3154
181 Ga0209371_1010176 3300027312 Bacteria 2918
182 Ga0209371_1036956 3300027312 Bacteria 1018
183 Ga0268266_10000199 3300028379 Bacteria 104808
184 Ga0268266_10013503 3300028379 Bacteria 7031
185 Ga0307515_10000007 3300028794 Bacteria 719669
186 Ga0307515_10173435 3300028794 Bacteria 2138
187 Ga0268256_1000113 3300030500 Bacteria 117659
188 Ga0268256_1000138 3300030500 Bacteria 100800
189 Ga0268256_1000277 3300030500 Bacteria 53139
190 Ga0268256_1001125 3300030500 Bacteria 17377
191 Ga0268256_1002190 3300030500 Bacteria 10334
192 Ga0268256_1002772 3300030500 Bacteria 8505
193 Ga0268256_1003338 3300030500 Bacteria 7326
194 Ga0268256_1003547 3300030500 Bacteria 6980
195 Ga0268256_1004038 3300030500 Bacteria 6304
196 Ga0268256_1009741 3300030500 Bacteria 3154
197 Ga0268256_1041972 3300030500 Bacteria 1018
198 Ga0307509_10021441 3300031507 Bacteria 7303
199 Ga0307509_10135254 3300031507 Unclassified 2412
200 Ga0307514_10220671 3300031649 Unclassified 1163
201 Ga0373927_0022601 3300035695 Bacteria 4118
202 Ga0436365_0402421 3300039437 Bacteria 121475
203 Ga0439438_007392 3300041405 Bacteria 3758
204 Ga0439438_008674 3300041405 Bacteria 3348
205 Ga0439447_001230 3300041407 Bacteria 9324
206 Ga0439447_024817 3300041407 Bacteria 1549
207 Ga0451853_3007034 3300041512 Bacteria 4309
208 Ga0439432_003716 3300042006 Bacteria 5647
209 Ga0439432_004917 3300042006 Bacteria 4841
210 Ga0439452_000042 3300042010 Bacteria 138073
211 Ga0439452_000063 3300042010 Bacteria 95039
212 Ga0439452_000176 3300042010 Bacteria 47891
213 Ga0439452_000393 3300042010 Bacteria 25956
214 Ga0439452_000491 3300042010 Bacteria 21861
215 Ga0439463_038640 3300042016 Bacteria 1211
216 Ga0450900_002399 3300042136 Bacteria 1983
217 Ga0450902_003155 3300042137 Bacteria 2388
218 Ga0439464_0017355 3300042439 Bacteria 1951
219 Ga0451577_0047941 3300042876 Unclassified 3818
220 Ga0466981_0000018 3300044669 Bacteria 92998
221 Ga0453684_0002970 3300044712 Bacteria 39607
222 Ga0451576_0012651 3300045051 Bacteria 9474
223 Ga0495627_000069 3300046453 Bacteria 125934
224 Ga0495591_000170 3300046458 Bacteria 67905
225 Ga0495591_003097 3300046458 Bacteria 8808
226 Ga0495591_012206 3300046458 Bacteria 3210
227 Ga0495638_0023154 3300046460 Bacteria 4067
228 Ga0495650_0000313 3300046471 Bacteria 87461
229 Ga0495650_0000380 3300046471 Bacteria 76955
230 Ga0495650_0000704 3300046471 Bacteria 42844
231 Ga0495650_0100126 3300046471 Bacteria 1089
232 Ga0495584_0003582 3300046491 Bacteria 8478
233 Ga0495607_0012956 3300046501 Bacteria 5483
234 Ga0495606_0001315 3300046507 Bacteria 34120
235 Ga0495616_0035487 3300046513 Bacteria 2580
236 Ga0495620_0006704 3300046515 Bacteria 6307
237 Ga0495648_0006643 3300046524 Bacteria 9368
238 Ga0495654_0000183 3300046530 Bacteria 61398
239 Ga0495654_0050136 3300046530 Bacteria 2041
240 Ga0495654_0067240 3300046530 Bacteria 1706
241 Ga0495654_0096719 3300046530 Bacteria 1364
242 Ga0495597_0000344 3300046542 Bacteria 41594
243 Ga0495611_0069800 3300046648 Bacteria 1606
244 Ga0495625_0076883 3300046660 Bacteria 2333
245 Ga0495588_0022873 3300046674 Bacteria 3091
246 Ga0495671_0010516 3300046692 Bacteria 5122
247 Ga0495671_0136391 3300046692 Bacteria 1196
248 Ga0495649_0029445 3300046694 Bacteria 3036
249 Ga0495649_0049812 3300046694 Bacteria 2274
250 Ga0495649_0066256 3300046694 Bacteria 1938
251 Ga0495589_0000041 3300046794 Bacteria 140490
252 Ga0495589_0001903 3300046794 Bacteria 11811
253 Ga0495660_0000058 3300046810 Bacteria 133170
254 Ga0495660_0000065 3300046810 Bacteria 120922
255 Ga0495672_0000106 3300047320 Bacteria 132815
256 Ga0495672_0000229 3300047320 Bacteria 80054
257 Ga0495683_0149066 3300047323 Bacteria 1090
258 Ga0495679_000170 3300047446 Bacteria 59106
259 Ga0495673_0000299 3300047469 Bacteria 66227
260 Ga0495673_0000371 3300047469 Bacteria 53983
261 Ga0496101_0190890 3300048904 Bacteria 1581
262 Ga0496103_0122352 3300048906 Bacteria 1658
263 Ga0496104_0000089 3300048907 Bacteria 88812
264 Ga0496104_0001652 3300048907 Bacteria 19253
265 Ga0496104_0322622 3300048907 Bacteria 1457
266 Ga0496105_0124513 3300048908 Bacteria 2125
267 Ga0496105_0132701 3300048908 Bacteria 2052
268 Ga0496105_0322668 3300048908 Bacteria 1237
269 Ga0496116_0000161 3300048919 Bacteria 135615
270 Ga0496116_0000177 3300048919 Bacteria 128402
271 Ga0496116_0000343 3300048919 Bacteria 74444
272 Ga0496116_0008803 3300048919 Bacteria 8696
273 Ga0496116_0015654 3300048919 Bacteria 5986
274 Ga0496116_0050622 3300048919 Bacteria 2766
275 Ga0496116_0091682 3300048919 Bacteria 1845
276 Ga0496116_0207526 3300048919 Bacteria 1018
277 Ga0496117_0007775 3300048920 Bacteria 10344
278 Ga0496117_0012241 3300048920 Bacteria 7586
279 Ga0496117_0018337 3300048920 Bacteria 5802
280 Ga0496117_0024465 3300048920 Bacteria 4776
281 Ga0496117_0025306 3300048920 Bacteria 4669
282 Ga0496117_0121168 3300048920 Bacteria 1606
283 Ga0496117_0132789 3300048920 Bacteria 1505
284 Ga0496117_0149372 3300048920 Bacteria 1385
285 Ga0496118_0002377 3300048921 Bacteria 25429
286 Ga0496118_0006169 3300048921 Bacteria 13282
287 Ga0496118_0006244 3300048921 Bacteria 13171
288 Ga0496118_0012392 3300048921 Bacteria 8192
289 Ga0496118_0013289 3300048921 Bacteria 7802
290 Ga0496118_0061393 3300048921 Bacteria 2783
291 Ga0496118_0125603 3300048921 Bacteria 1661
292 Ga0496119_0000085 3300048922 Bacteria 137406
293 Ga0496119_0000154 3300048922 Bacteria 95502
294 Ga0496119_0007001 3300048922 Bacteria 10271
295 Ga0496119_0010043 3300048922 Bacteria 8008
296 Ga0496119_0015578 3300048922 Bacteria 5840
297 Ga0496119_0018262 3300048922 Bacteria 5235
298 Ga0496119_0018359 3300048922 Bacteria 5211
299 Ga0496119_0027647 3300048922 Bacteria 3892
300 Ga0496119_0079552 3300048922 Bacteria 1893
301 Ga0496119_0121180 3300048922 Bacteria 1437
302 Ga0496119_0199254 3300048922 Bacteria 1037
303 Ga0496120_0000111 3300048923 Bacteria 137405
304 Ga0496120_0000136 3300048923 Bacteria 124418
305 Ga0496120_0000769 3300048923 Bacteria 46335
306 Ga0496120_0001149 3300048923 Bacteria 33975
307 Ga0496120_0001746 3300048923 Bacteria 24678
308 Ga0496120_0002590 3300048923 Bacteria 17985
309 Ga0496120_0006878 3300048923 Bacteria 8591
310 Ga0496120_0025594 3300048923 Bacteria 3660
311 Ga0496120_0109477 3300048923 Bacteria 1445
312 Ga0496120_0167315 3300048923 Bacteria 1090
313 Ga0496121_0002703 3300048924 Bacteria 26517
314 Ga0496121_0013144 3300048924 Bacteria 8930
315 Ga0496121_0024542 3300048924 Bacteria 5761
316 Ga0496121_0039537 3300048924 Bacteria 4153
317 Ga0496121_0051569 3300048924 Bacteria 3463
318 Ga0496121_0097275 3300048924 Bacteria 2281
319 Ga0496121_0194826 3300048924 Bacteria 1449
320 Ga0496122_0000251 3300048925 Bacteria 120977
321 Ga0496122_0000863 3300048925 Bacteria 57032
322 Ga0496122_0000902 3300048925 Bacteria 54945
323 Ga0496122_0001570 3300048925 Bacteria 36018
324 Ga0496122_0064120 3300048925 Bacteria 2675
325 Ga0496122_0116413 3300048925 Bacteria 1738
326 Ga0496122_0139927 3300048925 Bacteria 1516
327 Ga0496122_0141306 3300048925 Bacteria 1505
328 Ga0496122_0184112 3300048925 Bacteria 1241
329 Ga0496123_0000204 3300048926 Bacteria 120977
330 Ga0496123_0000660 3300048926 Bacteria 57032
331 Ga0496123_0001268 3300048926 Bacteria 36177
332 Ga0496123_0002682 3300048926 Bacteria 21424
333 Ga0496123_0004862 3300048926 Bacteria 13830
334 Ga0496123_0012192 3300048926 Bacteria 7357
335 Ga0496123_0094875 3300048926 Bacteria 1756
336 Ga0496123_0100053 3300048926 Bacteria 1690
337 Ga0496123_0100265 3300048926 Bacteria 1687
338 Ga0496123_0154060 3300048926 Bacteria 1235
339 Ga0496124_0000193 3300048927 Bacteria 120829
340 Ga0496124_0000395 3300048927 Bacteria 79580
341 Ga0496124_0001177 3300048927 Bacteria 40891
342 Ga0496124_0012337 3300048927 Bacteria 8438
343 Ga0496124_0106592 3300048927 Bacteria 2262
344 Ga0496124_0174538 3300048927 Bacteria 1660
345 Ga0496125_0000175 3300048928 Bacteria 142672
346 Ga0496125_0001038 3300048928 Bacteria 42937
347 Ga0496125_0007115 3300048928 Bacteria 11941
348 Ga0496125_0010742 3300048928 Bacteria 9223
349 Ga0496125_0017372 3300048928 Bacteria 6862
350 Ga0496125_0028740 3300048928 Bacteria 5012
351 Ga0496125_0033878 3300048928 Bacteria 4511
352 Ga0496125_0145299 3300048928 Bacteria 1640
353 Ga0496125_0291565 3300048928 Bacteria 1004
354 Ga0496126_0000488 3300048929 Bacteria 78186
355 Ga0496126_0024467 3300048929 Bacteria 5830
356 Ga0496126_0040265 3300048929 Bacteria 4332
357 Ga0496126_0061441 3300048929 Bacteria 3374
358 Ga0496126_0088220 3300048929 Bacteria 2732
359 Ga0496126_0139137 3300048929 Bacteria 2091
360 Ga0496126_0150339 3300048929 Bacteria 1996
361 Ga0495678_000088 3300049459 Bacteria 115071
362 Ga0495682_0000033 3300049460 Bacteria 132733
363 Ga0501069_0080762 3300049585 Bacteria 1832
364 nmdc:mga0k408_25764_c1 3300050493 Bacteria 3332
365 nmdc:mga08y16_15018_c1 3300050511 Bacteria 8146
366 Ga0500621_000013 3300053126 Bacteria 132878
367 Ga0500616_0057802 3300053153 Bacteria 2020

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009011 Ga0105251_10062440 Ga0105251_100624402 264
2 3300049585 Ga0501069_0080762 Ga0501069_0080762_868_1695 274
3 3300053153 Ga0500616_0057802 Ga0500616_0057802_386_1213 274
4 iso_pu_bacteria 2711768156 2712471796 276
5 3300009094 Ga0111539_10027845 Ga0111539_100278456 277
6 3300014326 Ga0157380_10048970 Ga0157380_100489704 277
7 3300015261 Ga0182006_1000071 Ga0182006_100007127 283
8 3300041405 Ga0439438_008674 Ga0439438_008674_1917_2885 283
9 3300048922 Ga0496119_0007001 Ga0496119_0007001_9191_10108 284
10 3300048923 Ga0496120_0001149 Ga0496120_0001149_32174_33091 284
11 3300009036 Ga0105244_10096741 Ga0105244_100967411 285
12 3300025728 Ga0207655_1061708 Ga0207655_10617082 285
13 3300048922 Ga0496119_0010043 Ga0496119_0010043_2761_3678 285
14 3300048923 Ga0496120_0000769 Ga0496120_0000769_32664_33581 285
15 3300048927 Ga0496124_0000395 Ga0496124_0000395_46001_46918 285
16 3300021384 Ga0213876_10000088 Ga0213876_1000008836 288
17 3300039437 Ga0436365_0402421 Ga0436365_0402421_42545_43516 288
18 3300048919 Ga0496116_0207526 Ga0496116_0207526_137_1003 288
19 3300013100 Ga0157373_10136354 Ga0157373_101363542 290
20 3300013307 Ga0157372_10002665 Ga0157372_1000266510 290
21 3300027312 Ga0209371_1000915 Ga0209371_100091516 290
22 3300030500 Ga0268256_1001125 Ga0268256_10011256 290
23 3300041407 Ga0439447_001230 Ga0439447_001230_1068_1997 290
24 3300048919 Ga0496116_0000177 Ga0496116_0000177_29468_30394 290
25 3300048922 Ga0496119_0015578 Ga0496119_0015578_1535_2461 290
26 3300048923 Ga0496120_0000136 Ga0496120_0000136_94165_95091 290
27 3300009092 Ga0105250_10000579 Ga0105250_100005796 292
28 3300025711 Ga0207696_1000252 Ga0207696_100025222 292
29 3300048925 Ga0496122_0139927 Ga0496122_0139927_97_1026 292
30 3300048926 Ga0496123_0154060 Ga0496123_0154060_168_1097 292
31 3300048927 Ga0496124_0106592 Ga0496124_0106592_409_1338 292
32 3300048928 Ga0496125_0000175 Ga0496125_0000175_92397_93326 292
33 3300006946 Ga0079104_1009388 Ga0079104_10093883 294
34 3300009011 Ga0105251_10005087 Ga0105251_100050877 294
35 3300009174 Ga0105241_10000030 Ga0105241_1000003029 294
36 3300013100 Ga0157373_10004794 Ga0157373_100047942 294
37 3300014497 Ga0182008_10001469 Ga0182008_100014695 294
38 3300025735 Ga0207713_1000121 Ga0207713_100012129 294
39 3300025911 Ga0207654_10000030 Ga0207654_1000003091 294
40 3300027111 Ga0209281_1000407 Ga0209281_100040735 294
41 3300042006 Ga0439432_003716 Ga0439432_003716_1158_2075 294
42 3300003794 Ga0055531_10000328 Ga0055531_1000032832 295
43 3300005563 Ga0068855_100071330 Ga0068855_1000713304 295
44 3300005618 Ga0068864_100228795 Ga0068864_1002287953 295
45 3300005841 Ga0068863_100069595 Ga0068863_1000695953 295
46 3300025304 Ga0209257_1000005 Ga0209257_100000550 295
47 3300025949 Ga0207667_10249993 Ga0207667_102499931 295
48 3300026088 Ga0207641_10370156 Ga0207641_103701561 295
49 3300026095 Ga0207676_10481837 Ga0207676_104818372 295
50 3300031507 Ga0307509_10021441 Ga0307509_100214415 295
51 3300031507 Ga0307509_10135254 Ga0307509_101352542 295
52 3300035695 Ga0373927_0022601 Ga0373927_0022601_2560_3450 295
53 3300003322 rootL2_10339190 rootL2_103391902 296
54 3300027312 Ga0209371_1010176 Ga0209371_10101763 296
55 3300048925 Ga0496122_0064120 Ga0496122_0064120_974_1903 296
56 3300048926 Ga0496123_0100265 Ga0496123_0100265_137_1066 296
57 3300003322 rootL2_10117321 rootL2_101173211 297
58 3300005262 Ga0065165_1026240 Ga0065165_10262403 297
59 3300009036 Ga0105244_10020370 Ga0105244_100203703 297
60 3300025298 Ga0209050_1005079 Ga0209050_10050796 297
61 3300028794 Ga0307515_10173435 Ga0307515_101734352 297
62 3300042876 Ga0451577_0047941 Ga0451577_0047941_1615_2511 297
63 3300044712 Ga0453684_0002970 Ga0453684_0002970_33551_34447 297
64 3300045051 Ga0451576_0012651 Ga0451576_0012651_711_1607 297
65 3300028794 Ga0307515_10000007 Ga0307515_10000007350 298
66 3300031649 Ga0307514_10220671 Ga0307514_102206711 298
67 iso_pu_bacteria 2846540461 2846544780 298
68 iso_pu_bacteria 2506520007 2506581003 299
69 iso_pu_bacteria 2506520008 2506586142 299
70 iso_pu_bacteria 2508501071 2508854803 299
71 iso_pu_bacteria 2537561728 2538427093 299
72 iso_pu_bacteria 2654587920 2656275114 299
73 iso_pu_bacteria 2687453601 2689447554 299
74 iso_pu_bacteria 2706794495 2707100838 299
75 iso_pu_bacteria 2772190666 2772441334 299
76 iso_pu_bacteria 2806310673 2807178902 299
77 iso_pu_bacteria 2854601825 2854604232 299
78 iso_pu_bacteria 2855195626 2855199198 299
79 iso_pu_bacteria 2858466076 2858468115 299
80 iso_pu_bacteria 2869551831 2869556983 299
81 iso_pu_bacteria 2871272651 2871276581 299
82 iso_pu_bacteria 2871282230 2871284826 299
83 iso_pu_bacteria 2888366609 2888371470 299
84 iso_pu_bacteria 2900051742 2900055072 299
85 iso_pu_bacteria 2932406140 2932409624 299
86 iso_pu_bacteria 2937967321 2937972275 299
87 iso_pu_bacteria 2939577877 2939580620 299
88 iso_pu_bacteria 640753048 640940367 299
89 iso_pu_bacteria 8004592986 8004593240 299
90 iso_pu_bacteria 8015394850 8015395010 299
91 iso_pu_bacteria 8055693939 8055694044 299
92 3300050511 nmdc:mga08y16_15018_c1 nmdc:mga08y16_15018_c1_957_1862 300
93 iso_pu_bacteria 2667528173 2671111040 301
94 iso_pu_bacteria 2847085930 2847089690 301
95 iso_pu_bacteria 2904474040 2904478911 301
96 iso_pu_bacteria 2919150387 2919154963 301
97 iso_pu_bacteria 2927143783 2927148603 301
98 3300002771 JGI25163J39215_1000213 JGI25163J39215_100021311 302
99 3300002772 JGI25164J39214_1000053 JGI25164J39214_100005328 302
100 3300003751 Ga0055538_1000056 Ga0055538_100005628 302
101 3300003752 Ga0055539_1000084 Ga0055539_100008484 302
102 3300003756 Ga0055533_1000090 Ga0055533_100009028 302
103 3300003759 Ga0055525_1000116 Ga0055525_100011684 302
104 3300003841 Ga0055541_1000058 Ga0055541_100005884 302
105 3300005289 Ga0065704_10000082 Ga0065704_100000828 302
106 3300006946 Ga0079104_1040190 Ga0079104_10401901 302
107 3300009011 Ga0105251_10005838 Ga0105251_100058386 302
108 3300009011 Ga0105251_10012629 Ga0105251_100126295 302
109 3300009036 Ga0105244_10000208 Ga0105244_1000020824 302
110 3300009036 Ga0105244_10000472 Ga0105244_1000047236 302
111 3300009092 Ga0105250_10001273 Ga0105250_100012737 302
112 3300009092 Ga0105250_10014867 Ga0105250_100148672 302
113 3300009101 Ga0105247_10000077 Ga0105247_1000007793 302
114 3300013306 Ga0163162_10040824 Ga0163162_100408244 302
115 3300017792 Ga0163161_10000048 Ga0163161_1000004892 302
116 3300025207 Ga0209760_100150 Ga0209760_10015011 302
117 3300025224 Ga0209784_100088 Ga0209784_10008827 302
118 3300025225 Ga0209566_100107 Ga0209566_10010727 302
119 3300025226 Ga0209674_100129 Ga0209674_10012927 302
120 3300025230 Ga0209563_100123 Ga0209563_10012327 302
121 3300025231 Ga0207427_100102 Ga0207427_10010227 302
122 3300025233 Ga0209437_100198 Ga0209437_10019827 302
123 3300025253 Ga0209677_100080 Ga0209677_10008027 302
124 3300025711 Ga0207696_1000227 Ga0207696_100022729 302
125 3300025711 Ga0207696_1000975 Ga0207696_10009757 302
126 3300025728 Ga0207655_1000163 Ga0207655_100016392 302
127 3300025728 Ga0207655_1000433 Ga0207655_100043327 302
128 3300025735 Ga0207713_1000622 Ga0207713_100062229 302
129 3300025735 Ga0207713_1005430 Ga0207713_10054302 302
130 3300025900 Ga0207710_10000088 Ga0207710_1000008829 302
131 3300027111 Ga0209281_1012043 Ga0209281_10120431 302
132 3300046453 Ga0495627_000069 Ga0495627_000069_91438_92355 302
133 3300046458 Ga0495591_003097 Ga0495591_003097_2392_3321 302
134 3300046471 Ga0495650_0000380 Ga0495650_0000380_32452_33381 302
135 3300046471 Ga0495650_0000704 Ga0495650_0000704_9643_10569 302
136 3300046491 Ga0495584_0003582 Ga0495584_0003582_2497_3426 302
137 3300046501 Ga0495607_0012956 Ga0495607_0012956_962_1891 302
138 3300046507 Ga0495606_0001315 Ga0495606_0001315_777_1706 302
139 3300046513 Ga0495616_0035487 Ga0495616_0035487_534_1463 302
140 3300046524 Ga0495648_0006643 Ga0495648_0006643_3987_4916 302
141 3300046530 Ga0495654_0000183 Ga0495654_0000183_29414_30343 302
142 3300046530 Ga0495654_0050136 Ga0495654_0050136_86_1003 302
143 3300046648 Ga0495611_0069800 Ga0495611_0069800_322_1251 302
144 3300046692 Ga0495671_0010516 Ga0495671_0010516_4045_4974 302
145 3300046694 Ga0495649_0066256 Ga0495649_0066256_549_1478 302
146 3300046794 Ga0495589_0000041 Ga0495589_0000041_31058_31975 302
147 3300046794 Ga0495589_0001903 Ga0495589_0001903_793_1722 302
148 3300046810 Ga0495660_0000058 Ga0495660_0000058_32447_33376 302
149 3300046810 Ga0495660_0000065 Ga0495660_0000065_32392_33318 302
150 3300047320 Ga0495672_0000106 Ga0495672_0000106_99457_100386 302
151 3300047323 Ga0495683_0149066 Ga0495683_0149066_55_984 302
152 3300047469 Ga0495673_0000371 Ga0495673_0000371_13060_13989 302
153 3300048906 Ga0496103_0122352 Ga0496103_0122352_185_1102 302
154 3300048907 Ga0496104_0001652 Ga0496104_0001652_2080_3006 302
155 3300048919 Ga0496116_0000161 Ga0496116_0000161_33571_34488 302
156 3300048919 Ga0496116_0000343 Ga0496116_0000343_41242_42168 302
157 3300048920 Ga0496117_0018337 Ga0496117_0018337_172_1089 302
158 3300048920 Ga0496117_0121168 Ga0496117_0121168_172_1089 302
159 3300048921 Ga0496118_0006169 Ga0496118_0006169_5054_5971 302
160 3300048922 Ga0496119_0000085 Ga0496119_0000085_105240_106166 302
161 3300048922 Ga0496119_0079552 Ga0496119_0079552_465_1382 302
162 3300048923 Ga0496120_0000111 Ga0496120_0000111_105239_106165 302
163 3300048923 Ga0496120_0001746 Ga0496120_0001746_14254_15180 302
164 3300048923 Ga0496120_0025594 Ga0496120_0025594_2487_3404 302
165 3300048925 Ga0496122_0000251 Ga0496122_0000251_32276_33202 302
166 3300048926 Ga0496123_0000204 Ga0496123_0000204_32276_33202 302
167 3300048927 Ga0496124_0000193 Ga0496124_0000193_87626_88552 302
168 3300048928 Ga0496125_0001038 Ga0496125_0001038_32277_33203 302
169 3300048929 Ga0496126_0000488 Ga0496126_0000488_32278_33204 302
170 3300049459 Ga0495678_000088 Ga0495678_000088_99454_100383 302
171 3300049460 Ga0495682_0000033 Ga0495682_0000033_99357_100286 302
172 3300053126 Ga0500621_000013 Ga0500621_000013_99461_100390 302
173 iso_pu_bacteria 2547132416 2548651623 302
174 iso_pu_bacteria 2599185169 2599413233 302
175 iso_pu_bacteria 2600255254 2601526074 302
176 iso_pu_bacteria 2600255255 2601531096 302
177 iso_pu_bacteria 2600255280 2601617930 302
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210 iso_pu_bacteria 2603880211 2606174397 302
211 iso_pu_bacteria 2636415599 2637227805 302
212 iso_pu_bacteria 2667528172 2671105721 302
213 iso_pu_bacteria 2671180115 2671588172 302
214 iso_pu_bacteria 2675903046 2676410010 302
215 iso_pu_bacteria 2681812866 2681995138 302
216 iso_pu_bacteria 2681812869 2682009897 302
217 iso_pu_bacteria 2751185917 2753858137 302
218 iso_pu_bacteria 2765235842 2765591301 302
219 iso_pu_bacteria 2775506706 2775538357 302
220 iso_pu_bacteria 2775507074 2777024105 302
221 iso_pu_bacteria 2821118458 2821122932 302
222 iso_pu_bacteria 2823373977 2823378388 302
223 iso_pu_bacteria 2844425489 2844429640 302
224 iso_pu_bacteria 2852103415 2852104154 302
225 iso_pu_bacteria 2904513164 2904518215 302
226 iso_pu_bacteria 2908669403 2908674318 302
227 iso_pu_bacteria 2923634449 2923637164 302
228 iso_pu_bacteria 2927833300 2927836390 302
229 iso_pu_bacteria 2937539931 2937542003 302
230 iso_pu_bacteria 2939568625 2939572820 302
231 iso_pu_bacteria 2939607340 2939611735 302
232 iso_pu_bacteria 2939642701 2939646831 302
233 iso_pu_bacteria 2969079654 2969084854 302
234 iso_pu_bacteria 2974310843 2974314459 302
235 iso_pu_bacteria 2984559226 2984561973 302
236 iso_pu_bacteria 2984595703 2984600039 302
237 iso_pu_bacteria 8018221730 8018224941 302
238 iso_pu_bacteria 8018405270 8018405699 302
239 iso_pu_bacteria 8055087960 8055089072 302
240 iso_pu_bacteria 8055092621 8055093357 302
241 iso_pu_bacteria 8055097453 8055097892 302
242 iso_pu_bacteria 2554235234 2555262376 303
243 iso_pu_bacteria 2561511199 2562465281 303
244 iso_pu_bacteria 2600255256 2601536637 303
245 iso_pu_bacteria 2600255257 2601542009 303
246 iso_pu_bacteria 2600255310 2601760369 303
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248 iso_pu_bacteria 2602042046 2603641466 303
249 iso_pu_bacteria 2711768156 2712471866 303
250 iso_pu_bacteria 2791354903 2791922730 303
251 iso_pu_bacteria 2791355275 2793407453 303
252 iso_pu_bacteria 2814123068 2814698962 303
253 iso_pu_bacteria 2884086401 2884091136 303
254 iso_pu_bacteria 2891670763 2891672009 303
255 iso_pu_bacteria 2919108558 2919113881 303
256 iso_pu_bacteria 2939573065 2939577482 303
257 iso_pu_bacteria 2971820967 2971826383 303
258 iso_pu_bacteria 3000376612 3000376736 303
259 iso_pu_bacteria 8054849141 8054849913 303
260 iso_pu_bacteria 8057304971 8057305292 303
261 3300041407 Ga0439447_024817 Ga0439447_024817_321_1244 304
262 3300006946 Ga0079104_1000191 Ga0079104_100019118 305
263 3300006946 Ga0079104_1000217 Ga0079104_100021733 305
264 3300027111 Ga0209281_1000224 Ga0209281_100022432 305
265 3300027111 Ga0209281_1000278 Ga0209281_100027866 305
266 3300030500 Ga0268256_1002190 Ga0268256_10021902 305
267 2162886007 SwRhRL2b_contig_1110011 SwRhRL2b_0148.00004690 306
268 2162886007 SwRhRL2b_contig_1610885 SwRhRL2b_0346.00000660 306
269 2162886007 SwRhRL2b_contig_2175305 SwRhRL2b_0646.00007690 306
270 2162886007 SwRhRL2b_contig_3862299 SwRhRL2b_0508.00001050 306
271 3300002773 JGI25152J39213_1000244 JGI25152J39213_100024416 306
272 3300003320 rootH2_10031095 rootH2_100310955 306
273 3300003856 Ga0058692_1002170 Ga0058692_10021704 306
274 3300003856 Ga0058692_1010627 Ga0058692_10106273 306
275 3300003856 Ga0058692_1014885 Ga0058692_10148853 306
276 3300005289 Ga0065704_10000573 Ga0065704_100005733 306
277 3300005289 Ga0065704_10001643 Ga0065704_100016436 306
278 3300005289 Ga0065704_10001824 Ga0065704_100018249 306
279 3300005289 Ga0065704_10009239 Ga0065704_100092391 306
280 3300005289 Ga0065704_10075587 Ga0065704_100755875 306
281 3300005366 Ga0070659_100033704 Ga0070659_1000337044 306
282 3300005548 Ga0070665_100000842 Ga0070665_10000084218 306
283 3300005548 Ga0070665_100017023 Ga0070665_1000170236 306
284 3300005577 Ga0068857_100000014 Ga0068857_10000001428 306
285 3300005834 Ga0068851_10019208 Ga0068851_100192083 306
286 3300006051 Ga0075364_10002925 Ga0075364_100029256 306
287 3300006051 Ga0075364_10013439 Ga0075364_100134392 306
288 3300006195 Ga0075366_10018747 Ga0075366_100187474 306
289 3300006946 Ga0079104_1000088 Ga0079104_100008844 306
290 3300006946 Ga0079104_1000964 Ga0079104_100096422 306
291 3300006946 Ga0079104_1002681 Ga0079104_100268110 306
292 3300006946 Ga0079104_1003877 Ga0079104_10038774 306
293 3300006946 Ga0079104_1009386 Ga0079104_10093863 306
294 3300006946 Ga0079104_1013724 Ga0079104_10137242 306
295 3300006946 Ga0079104_1040467 Ga0079104_10404671 306
296 3300009011 Ga0105251_10000615 Ga0105251_100006158 306
297 3300009011 Ga0105251_10001152 Ga0105251_1000115219 306
298 3300009011 Ga0105251_10005856 Ga0105251_100058566 306
299 3300009011 Ga0105251_10019388 Ga0105251_100193882 306
300 3300009011 Ga0105251_10024245 Ga0105251_100242452 306
301 3300009011 Ga0105251_10033599 Ga0105251_100335992 306
302 3300009011 Ga0105251_10059455 Ga0105251_100594552 306
303 3300009011 Ga0105251_10115113 Ga0105251_101151132 306
304 3300009036 Ga0105244_10000143 Ga0105244_1000014313 306
305 3300009036 Ga0105244_10000301 Ga0105244_1000030129 306
306 3300009036 Ga0105244_10000390 Ga0105244_1000039026 306
307 3300009036 Ga0105244_10001461 Ga0105244_1000146118 306
308 3300009036 Ga0105244_10006390 Ga0105244_100063906 306
309 3300009036 Ga0105244_10011375 Ga0105244_100113755 306
310 3300009036 Ga0105244_10096259 Ga0105244_100962592 306
311 3300009036 Ga0105244_10097124 Ga0105244_100971242 306
312 3300009092 Ga0105250_10000115 Ga0105250_1000011541 306
313 3300009092 Ga0105250_10002167 Ga0105250_100021677 306
314 3300009092 Ga0105250_10003368 Ga0105250_100033684 306
315 3300009092 Ga0105250_10014002 Ga0105250_100140023 306
316 3300009092 Ga0105250_10039370 Ga0105250_100393702 306
317 3300009093 Ga0105240_10083450 Ga0105240_100834502 306
318 3300009148 Ga0105243_10000186 Ga0105243_1000018642 306
319 3300009148 Ga0105243_10060340 Ga0105243_100603402 306
320 3300011119 Ga0105246_10005679 Ga0105246_100056792 306
321 3300013100 Ga0157373_10192077 Ga0157373_101920772 306
322 3300013102 Ga0157371_10164990 Ga0157371_101649902 306
323 3300013102 Ga0157371_10385860 Ga0157371_103858601 306
324 3300013104 Ga0157370_10040993 Ga0157370_100409934 306
325 3300013105 Ga0157369_10000367 Ga0157369_1000036730 306
326 3300013307 Ga0157372_10000088 Ga0157372_1000008867 306
327 3300013307 Ga0157372_10094062 Ga0157372_100940622 306
328 3300015679 Ga0183366_1008 Ga0183366_100860 306
329 3300015680 Ga0183370_1008 Ga0183370_100860 306
330 3300015685 Ga0183369_1023 Ga0183369_102360 306
331 3300015687 Ga0183368_1011 Ga0183368_101160 306
332 3300017792 Ga0163161_10025725 Ga0163161_100257251 306
333 3300025245 Ga0207425_1017876 Ga0207425_10178762 306
334 3300025258 Ga0209129_1000173 Ga0209129_100017327 306
335 3300025711 Ga0207696_1000182 Ga0207696_100018264 306
336 3300025711 Ga0207696_1000430 Ga0207696_100043026 306
337 3300025711 Ga0207696_1001329 Ga0207696_10013297 306
338 3300025711 Ga0207696_1001936 Ga0207696_10019364 306
339 3300025728 Ga0207655_1000152 Ga0207655_100015235 306
340 3300025728 Ga0207655_1000182 Ga0207655_100018245 306
341 3300025728 Ga0207655_1000189 Ga0207655_100018967 306
342 3300025728 Ga0207655_1000235 Ga0207655_100023513 306
343 3300025728 Ga0207655_1001855 Ga0207655_100185510 306
344 3300025728 Ga0207655_1005656 Ga0207655_10056568 306
345 3300025728 Ga0207655_1005819 Ga0207655_10058193 306
346 3300025728 Ga0207655_1025590 Ga0207655_10255903 306
347 3300025728 Ga0207655_1069594 Ga0207655_10695942 306
348 3300025735 Ga0207713_1000141 Ga0207713_100014133 306
349 3300025735 Ga0207713_1000165 Ga0207713_100016529 306
350 3300025735 Ga0207713_1000178 Ga0207713_100017830 306
351 3300025735 Ga0207713_1005072 Ga0207713_10050726 306
352 3300025735 Ga0207713_1005885 Ga0207713_10058856 306
353 3300025735 Ga0207713_1032930 Ga0207713_10329303 306
354 3300025735 Ga0207713_1042459 Ga0207713_10424592 306
355 3300025735 Ga0207713_1047874 Ga0207713_10478741 306
356 3300025735 Ga0207713_1091743 Ga0207713_10917431 306
357 3300025913 Ga0207695_10055199 Ga0207695_100551992 306
358 3300025920 Ga0207649_10153030 Ga0207649_101530302 306
359 3300025932 Ga0207690_10037461 Ga0207690_100374612 306
360 3300025935 Ga0207709_10001059 Ga0207709_100010597 306
361 3300026116 Ga0207674_10000080 Ga0207674_1000008067 306
362 3300027111 Ga0209281_1000176 Ga0209281_100017695 306
363 3300027111 Ga0209281_1000217 Ga0209281_100021735 306
364 3300027111 Ga0209281_1000436 Ga0209281_100043634 306
365 3300027111 Ga0209281_1000466 Ga0209281_100046647 306
366 3300027111 Ga0209281_1001266 Ga0209281_10012669 306
367 3300027111 Ga0209281_1001718 Ga0209281_10017188 306
368 3300027312 Ga0209371_1000143 Ga0209371_100014329 306
369 3300027312 Ga0209371_1000162 Ga0209371_100016228 306
370 3300027312 Ga0209371_1000252 Ga0209371_100025233 306
371 3300027312 Ga0209371_1000362 Ga0209371_100036226 306
372 3300027312 Ga0209371_1003085 Ga0209371_10030853 306
373 3300027312 Ga0209371_1003642 Ga0209371_10036422 306
374 3300027312 Ga0209371_1003744 Ga0209371_10037447 306
375 3300027312 Ga0209371_1009230 Ga0209371_10092304 306
376 3300027312 Ga0209371_1036956 Ga0209371_10369561 306
377 3300028379 Ga0268266_10000199 Ga0268266_1000019971 306
378 3300028379 Ga0268266_10013503 Ga0268266_100135035 306
379 3300030500 Ga0268256_1000113 Ga0268256_100011328 306
380 3300030500 Ga0268256_1000138 Ga0268256_100013867 306
381 3300030500 Ga0268256_1000277 Ga0268256_100027722 306
382 3300030500 Ga0268256_1002772 Ga0268256_10027723 306
383 3300030500 Ga0268256_1003338 Ga0268256_10033382 306
384 3300030500 Ga0268256_1003547 Ga0268256_10035477 306
385 3300030500 Ga0268256_1004038 Ga0268256_10040384 306
386 3300030500 Ga0268256_1009741 Ga0268256_10097412 306
387 3300030500 Ga0268256_1041972 Ga0268256_10419721 306
388 3300041405 Ga0439438_007392 Ga0439438_007392_2557_3477 306
389 3300041512 Ga0451853_3007034 Ga0451853_3007034_2962_3882 306
390 3300042006 Ga0439432_004917 Ga0439432_004917_3801_4727 306
391 3300042010 Ga0439452_000042 Ga0439452_000042_104136_105065 306
392 3300042010 Ga0439452_000063 Ga0439452_000063_31783_32712 306
393 3300042010 Ga0439452_000176 Ga0439452_000176_33109_34029 306
394 3300042010 Ga0439452_000393 Ga0439452_000393_23359_24291 306
395 3300042010 Ga0439452_000491 Ga0439452_000491_14431_15351 306
396 3300042016 Ga0439463_038640 Ga0439463_038640_178_1098 306
397 3300042136 Ga0450900_002399 Ga0450900_002399_249_1169 306
398 3300042137 Ga0450902_003155 Ga0450902_003155_1273_2193 306
399 3300042439 Ga0439464_0017355 Ga0439464_0017355_728_1648 306
400 3300044669 Ga0466981_0000018 Ga0466981_0000018_33229_34149 306
401 3300046458 Ga0495591_000170 Ga0495591_000170_32320_33240 306
402 3300046458 Ga0495591_012206 Ga0495591_012206_1872_2792 306
403 3300046460 Ga0495638_0023154 Ga0495638_0023154_1150_2070 306
404 3300046471 Ga0495650_0000313 Ga0495650_0000313_53337_54257 306
405 3300046471 Ga0495650_0100126 Ga0495650_0100126_122_1048 306
406 3300046515 Ga0495620_0006704 Ga0495620_0006704_5181_6101 306
407 3300046530 Ga0495654_0067240 Ga0495654_0067240_311_1240 306
408 3300046530 Ga0495654_0096719 Ga0495654_0096719_261_1181 306
409 3300046542 Ga0495597_0000344 Ga0495597_0000344_7386_8315 306
410 3300046660 Ga0495625_0076883 Ga0495625_0076883_154_1083 306
411 3300046674 Ga0495588_0022873 Ga0495588_0022873_1920_2849 306
412 3300046692 Ga0495671_0136391 Ga0495671_0136391_199_1125 306
413 3300046694 Ga0495649_0029445 Ga0495649_0029445_106_1026 306
414 3300046694 Ga0495649_0049812 Ga0495649_0049812_1158_2078 306
415 3300047320 Ga0495672_0000229 Ga0495672_0000229_45305_46234 306
416 3300047446 Ga0495679_000170 Ga0495679_000170_26188_27117 306
417 3300047469 Ga0495673_0000299 Ga0495673_0000299_24332_25252 306
418 3300048904 Ga0496101_0190890 Ga0496101_0190890_169_1089 306
419 3300048907 Ga0496104_0000089 Ga0496104_0000089_59105_60025 306
420 3300048907 Ga0496104_0322622 Ga0496104_0322622_126_1052 306
421 3300048908 Ga0496105_0124513 Ga0496105_0124513_523_1452 306
422 3300048908 Ga0496105_0132701 Ga0496105_0132701_1061_1981 306
423 3300048908 Ga0496105_0322668 Ga0496105_0322668_190_1116 306
424 3300048919 Ga0496116_0008803 Ga0496116_0008803_6544_7464 306
425 3300048919 Ga0496116_0015654 Ga0496116_0015654_2257_3177 306
426 3300048919 Ga0496116_0050622 Ga0496116_0050622_137_1066 306
427 3300048919 Ga0496116_0091682 Ga0496116_0091682_341_1261 306
428 3300048920 Ga0496117_0007775 Ga0496117_0007775_2191_3111 306
429 3300048920 Ga0496117_0012241 Ga0496117_0012241_768_1697 306
430 3300048920 Ga0496117_0024465 Ga0496117_0024465_3060_3980 306
431 3300048920 Ga0496117_0025306 Ga0496117_0025306_814_1734 306
432 3300048920 Ga0496117_0132789 Ga0496117_0132789_541_1461 306
433 3300048920 Ga0496117_0149372 Ga0496117_0149372_130_1056 306
434 3300048921 Ga0496118_0002377 Ga0496118_0002377_3663_4583 306
435 3300048921 Ga0496118_0006244 Ga0496118_0006244_3086_4006 306
436 3300048921 Ga0496118_0012392 Ga0496118_0012392_6496_7425 306
437 3300048921 Ga0496118_0013289 Ga0496118_0013289_5882_6802 306
438 3300048921 Ga0496118_0061393 Ga0496118_0061393_975_1904 306
439 3300048921 Ga0496118_0125603 Ga0496118_0125603_444_1370 306
440 3300048922 Ga0496119_0000154 Ga0496119_0000154_31776_32705 306
441 3300048922 Ga0496119_0018262 Ga0496119_0018262_596_1516 306
442 3300048922 Ga0496119_0018359 Ga0496119_0018359_3059_3979 306
443 3300048922 Ga0496119_0027647 Ga0496119_0027647_1574_2500 306
444 3300048922 Ga0496119_0121180 Ga0496119_0121180_341_1261 306
445 3300048922 Ga0496119_0199254 Ga0496119_0199254_83_1003 306
446 3300048923 Ga0496120_0002590 Ga0496120_0002590_15961_16881 306
447 3300048923 Ga0496120_0006878 Ga0496120_0006878_6452_7372 306
448 3300048923 Ga0496120_0109477 Ga0496120_0109477_130_1056 306
449 3300048923 Ga0496120_0167315 Ga0496120_0167315_60_980 306
450 3300048924 Ga0496121_0002703 Ga0496121_0002703_17846_18766 306
451 3300048924 Ga0496121_0013144 Ga0496121_0013144_830_1750 306
452 3300048924 Ga0496121_0024542 Ga0496121_0024542_3863_4783 306
453 3300048924 Ga0496121_0039537 Ga0496121_0039537_175_1095 306
454 3300048924 Ga0496121_0051569 Ga0496121_0051569_824_1744 306
455 3300048924 Ga0496121_0097275 Ga0496121_0097275_74_994 306
456 3300048924 Ga0496121_0194826 Ga0496121_0194826_106_1026 306
457 3300048925 Ga0496122_0000863 Ga0496122_0000863_42063_42983 306
458 3300048925 Ga0496122_0000902 Ga0496122_0000902_25436_26407 306
459 3300048925 Ga0496122_0001570 Ga0496122_0001570_13960_14880 306
460 3300048925 Ga0496122_0116413 Ga0496122_0116413_93_1022 306
461 3300048925 Ga0496122_0141306 Ga0496122_0141306_45_965 306
462 3300048925 Ga0496122_0184112 Ga0496122_0184112_215_1135 306
463 3300048926 Ga0496123_0000660 Ga0496123_0000660_42063_42983 306
464 3300048926 Ga0496123_0001268 Ga0496123_0001268_3986_4957 306
465 3300048926 Ga0496123_0002682 Ga0496123_0002682_13960_14880 306
466 3300048926 Ga0496123_0004862 Ga0496123_0004862_3065_3994 306
467 3300048926 Ga0496123_0012192 Ga0496123_0012192_75_995 306
468 3300048926 Ga0496123_0094875 Ga0496123_0094875_45_965 306
469 3300048926 Ga0496123_0100053 Ga0496123_0100053_664_1584 306
470 3300048927 Ga0496124_0001177 Ga0496124_0001177_8178_9107 306
471 3300048927 Ga0496124_0012337 Ga0496124_0012337_450_1376 306
472 3300048927 Ga0496124_0174538 Ga0496124_0174538_565_1485 306
473 3300048928 Ga0496125_0007115 Ga0496125_0007115_4598_5518 306
474 3300048928 Ga0496125_0010742 Ga0496125_0010742_817_1737 306
475 3300048928 Ga0496125_0017372 Ga0496125_0017372_3859_4788 306
476 3300048928 Ga0496125_0028740 Ga0496125_0028740_3093_4013 306
477 3300048928 Ga0496125_0033878 Ga0496125_0033878_1105_2025 306
478 3300048928 Ga0496125_0145299 Ga0496125_0145299_639_1559 306
479 3300048928 Ga0496125_0291565 Ga0496125_0291565_54_974 306
480 3300048929 Ga0496126_0024467 Ga0496126_0024467_244_1164 306
481 3300048929 Ga0496126_0040265 Ga0496126_0040265_715_1644 306
482 3300048929 Ga0496126_0061441 Ga0496126_0061441_806_1726 306
483 3300048929 Ga0496126_0088220 Ga0496126_0088220_36_956 306
484 3300048929 Ga0496126_0139137 Ga0496126_0139137_1070_1996 306
485 3300048929 Ga0496126_0150339 Ga0496126_0150339_75_995 306
486 3300050493 nmdc:mga0k408_25764_c1 nmdc:mga0k408_25764_c1_1899_2819 306
487 iso_pu_bacteria 2547132181 2547698408 306
488 iso_pu_bacteria 2602042109 2603864703 306
489 iso_pu_bacteria 2609459761 2609914040 306
490 iso_pu_bacteria 2791355010 2792314517 306
491 iso_pu_bacteria 2935625433 2935629965 306
492 iso_pu_bacteria 2939617950 2939622150 306
493 iso_pu_bacteria 2945874760 2945875104 306
494 iso_pu_bacteria 2974435778 2974436322 306
495 iso_pu_bacteria 8019504834 8019509009 306
496 iso_pu_bacteria 8054844752 8054844953 306

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01040

UbiA

UbiA prenyltransferase family

38

310

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
8djm-assembly1.cif.gz_B hmgcr-ubiad1 complex state 1 0.8417 7 301
8djm-assembly1.cif.gz_B hmgcr-ubiad1 complex state 1 0.8009 7 301
4od4-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7454 17 301
4od4-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7265 17 301
7bpu-assembly1.cif.gz_A structural and mechanistic insights into the biosynthesis of digeranylgeranylglyceryl phosphate synthase in membranes 0.6733 4 300
ID Description Score Start End Superfamily
af_P32166_24_288_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.9521 23 285 1.20.1070.10
af_P32166_24_288_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.9416 23 285 1.20.1070.10
af_Q2FZM0_184_310_1.20.120.1780 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);UbiA prenyltransferase 0.9056 182 306 1.20.120.1780
af_Q54K99_53_319_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.8977 23 292 1.10.357.140
af_Q54K99_53_319_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.8883 23 292 1.10.357.140
ID Description Score Start End GO Terms
AF-A0A6M1HVW5-F1-model_v4 deleted 0.9998 149 306
AF-A0A447RTV7-F1-model_v4 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) 0.9939 149 306 GO:0005886
GO:0009234
GO:0032194
GO:0042371
GO:0046428
AF-A0A6M1HVW5-F1-model_v4 deleted 0.9935 149 306
AF-A0A655BYP0-F1-model_v4 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) 0.9823 166 306 GO:0005886
GO:0009234
GO:0032194
GO:0042371
GO:0046428
AF-A0A655BYP0-F1-model_v4 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.74) 0.9755 166 306 GO:0005886
GO:0009234
GO:0032194
GO:0042371
GO:0046428

Feature Viewer

pLDDT pTM Quality
90.19 0.89 High
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Predicted Structure (AlphaFold2)

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