F453014

General Info

Members Datasets Scaffolds Average Seq Length
484 450 123 532

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221726|2644688500
Length 605
Sequence KETILAVRGLKVNFSTPDGTVEAVKGIDLDVRTGETLAVVGESGSGKSQTMMGIMGLLAKNGTVTGSATYRGQELVGLPAKALNQVRGAKVTMIFQEPMTSLDPLYPVGRQIAEPIVHHRGGTFKQARARVLELLELVGIPEPARRIDSYPHELSGGQRQRVMIAMALANDPDLLIADEPTTALDVTIQAQILDLLKSLQKRFGMAIVLITHDLGIVKHFADRVAVMRRGEVVEKGTTTDIFERPQADYTKMLLAAEPSGRKASPPDSAPIILEGRDVCVDYQIGGGLFRGGKSVFRAVDSVNLRLKEGQTIGVVGESGSGKSTLGRALLRLLPSSGHYRFGTTDISGFDRGQMRPLRRTLQLVFQDPYGSLSPRRTVGEIITEGLHVHEPELTRADRDRRASEALKEVGLDPASRNRYPHEFSGGQRQRIAIARAMILKPKVVILDEPTSALDRSVQGQVIELLRDLQRSHGLSYIFISHDLSVVKAMSDYVIVMKNGKIVEEGETDAIFEAPKQPYTKTLIGAAXXXXXXXXXXXXXDASDRVPVSVLGLGNVRSRSLRRNRKRRVSCRARTSASSRRASSARCRGSRRPASARRHGRRLRWR

Samples

Sample ID Description Type Environment
1 2503198000 Mesorhizobium opportunistum WSM2075 Isolate Nodule
2 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
3 2508501127 Mesorhizobium sp. WSM2561 Isolate Nodule
4 2509276019 Ensifer aridi TW10 Isolate Nodule
5 2510065057 Sinorhizobium meliloti WSM1022 Isolate Nodule
6 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
7 2511231052 Sinorhizobium meliloti AK58 Isolate Nodule
8 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
9 2512875016 Mesorhizobium japonicum R7A Isolate Nodule
10 2512875026 Sinorhizobium medicae WSM1115 Isolate Nodule
11 2513237086 Sinorhizobium meliloti MVII-I Isolate Nodule
12 2513237089 Sinorhizobium medicae DI28 Isolate Nodule
13 2513237091 Sinorhizobium meliloti RRI128 Isolate Nodule
14 2513237140 Sinorhizobium meliloti GVPV12 Isolate Nodule
15 2513237143 Sinorhizobium meliloti Mlalz-1 Isolate Nodule
16 2513237156 Sinorhizobium medicae WSM1369 Isolate Nodule
17 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
18 2513237160 Sinorhizobium medicae WSM244 Isolate Nodule
19 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
20 2516143018 Ensifer sp. BR816 Isolate Nodule
21 2516653046 Sinorhizobium meliloti BO21CC Isolate Nodule
22 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
23 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
24 2524023207 Ensifer sp. USDA 6670 Isolate Nodule
25 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
26 2551306084 Sinorhizobium meliloti 5A14 Isolate Nodule
27 2551306085 Sinorhizobium meliloti AE608H Isolate Nodule
28 2551306086 Sinorhizobium meliloti AK11 Isolate Nodule
29 2551306089 Sinorhizobium meliloti 1A42 Isolate Nodule
30 2551306090 Sinorhizobium meliloti A0641M Isolate Nodule
31 2551306093 Sinorhizobium meliloti C0438LL Isolate Nodule
32 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
33 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
34 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
35 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
36 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
37 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
38 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
39 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
40 2588253730 Mesorhizobium huakuii 7653R Isolate Rhizosphere
41 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
42 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
43 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
44 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
45 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
46 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
47 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
48 2643221557 Ensifer sp. Root558 Isolate Unclassified
49 2643221568 Rhizobium sp. Root564 Isolate Unclassified
50 2643221582 Rhizobium sp. Root651 Isolate Unclassified
51 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
52 2643221599 Rhizobium sp. Root708 Isolate Unclassified
53 2643221607 Rhizobium sp. Root73 Isolate Unclassified
54 2643221610 Ensifer sp. Root74 Isolate Unclassified
55 2643221618 Ensifer sp. Root231 Isolate Unclassified
56 2643221626 Ensifer sp. Root31 Isolate Unclassified
57 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
58 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
59 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
60 2643221655 Ensifer sp. Root1252 Isolate Unclassified
61 2643221659 Ensifer sp. Root127 Isolate Unclassified
62 2643221668 Ensifer sp. Root423 Isolate Unclassified
63 2643221675 Ensifer sp. Root1298 Isolate Unclassified
64 2643221680 Ensifer sp. Root1312 Isolate Unclassified
65 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
66 2643221688 Rhizobium sp. Root482 Isolate Unclassified
67 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
68 2643221693 Rhizobium sp. Root491 Isolate Unclassified
69 2643221698 Ensifer sp. Root142 Isolate Unclassified
70 2643221712 Ensifer sp. Root258 Isolate Unclassified
71 2643221718 Rhizobium sp. Root268 Isolate Unclassified
72 2643221719 Rhizobium sp. Root274 Isolate Unclassified
73 2643221723 Ensifer sp. Root278 Isolate Unclassified
74 2643221726 Ensifer sp. Root954 Isolate Unclassified
75 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
76 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
77 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
78 2751185821 Ensifer shofinae CCBAU 251167 Isolate Unclassified
79 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
80 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
81 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
82 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
83 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
84 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
85 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
86 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
87 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
88 2791355123 Mesorhizobium sophorae ICMP 19535 Isolate Unclassified
89 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
90 2802428858 Sinorhizobium medicae M14-1 Isolate Nodule
91 2802428859 Sinorhizobium medicae SF3.41 Isolate Nodule
92 2802428860 Sinorhizobium medicae M19-1 Isolate Nodule
93 2802428861 Sinorhizobium medicae USDA1037 Isolate Nodule
94 2802428862 Sinorhizobium medicae M7-4 Isolate Nodule
95 2802428863 Sinorhizobium medicae M26-2 Isolate Nodule
96 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
97 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
98 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
99 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
100 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
101 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
102 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
103 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
104 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
105 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
106 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
107 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
108 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
109 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
110 2841734538 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 Isolate Nodule
111 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
112 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
113 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
114 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
115 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
116 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
117 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
118 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
119 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
120 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
121 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
122 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
123 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
124 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
125 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
126 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
127 2844163670 Ensifer sp. 1H6 Isolate Unclassified
128 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
129 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
130 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
131 2855825444 Sinorhizobium meliloti CXM1-105 Isolate Nodule
132 2855839649 Sinorhizobium meliloti AK555 Isolate Unclassified
133 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
134 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
135 2858800743 Sinorhizobium meliloti AK170 Isolate Unclassified
136 2871474448 Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 Isolate Nodule
137 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
138 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
139 2885312484 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 Isolate Nodule
140 2885318864 Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 Isolate Nodule
141 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
142 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
143 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
144 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
145 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
146 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
147 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
148 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
149 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
150 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
151 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
152 2915980308 Sinorhizobium medicae USDA1149 Isolate Nodule
153 2915986958 Sinorhizobium meliloti USDA1659 Isolate Nodule
154 2915993759 Sinorhizobium meliloti USDA1336 Isolate Nodule
155 2916000859 Sinorhizobium meliloti USDA1562 Isolate Nodule
156 2916007675 Sinorhizobium meliloti USDA1289 Isolate Nodule
157 2916014648 Sinorhizobium meliloti USDA1583 Isolate Nodule
158 2916021584 Sinorhizobium meliloti USDA1550 Isolate Nodule
159 2916028427 Sinorhizobium meliloti USDA1613 Isolate Nodule
160 2916035215 Sinorhizobium meliloti 3011 Isolate Nodule
161 2916041962 Sinorhizobium meliloti USDA1795 Isolate Nodule
162 2916048683 Sinorhizobium meliloti USDA1796 Isolate Nodule
163 2916055098 Sinorhizobium meliloti USDA1770 Isolate Nodule
164 2916061851 Sinorhizobium medicae USDA1638 Isolate Nodule
165 2916076590 Sinorhizobium meliloti USDA1661 Isolate Nodule
166 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
167 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
168 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
169 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
170 2920822456 Ensifer sesbaniae CCBAU 65729 Isolate Unclassified
171 2921201388 Sinorhizobium meliloti USDA1692 Isolate Nodule
172 2921208531 Sinorhizobium meliloti USDA1660 Isolate Nodule
173 2921237296 Sinorhizobium meliloti USDA1508 Isolate Nodule
174 2921244191 Sinorhizobium meliloti 2119 Isolate Nodule
175 2921250672 Sinorhizobium medicae USDA1169 Isolate Nodule
176 2921257292 Sinorhizobium meliloti USDA1320 Isolate Nodule
177 2921263974 Sinorhizobium meliloti USDA1107 Isolate Nodule
178 2921282425 Sinorhizobium meliloti USDA1203 Isolate Nodule
179 2921289301 Sinorhizobium meliloti USDA1730 Isolate Nodule
180 2921296804 Sinorhizobium meliloti USDA1200 Isolate Nodule
181 2924144063 Sinorhizobium meliloti USDA1022 Isolate Nodule
182 2924150972 Sinorhizobium meliloti USDA1700 Isolate Nodule
183 2924158325 Sinorhizobium meliloti USDA1146 Isolate Nodule
184 2924165586 Sinorhizobium meliloti USDA1264 Isolate Nodule
185 2924172951 Sinorhizobium meliloti USDA1626 Isolate Nodule
186 2924186466 Sinorhizobium meliloti USDA1389 Isolate Nodule
187 2924193448 Sinorhizobium meliloti USDA1158 Isolate Nodule
188 2924200457 Sinorhizobium meliloti USDA1007 Isolate Nodule
189 2924207177 Sinorhizobium meliloti USDA1589 Isolate Nodule
190 2924214083 Sinorhizobium meliloti USDA1702 Isolate Nodule
191 2924221636 Sinorhizobium meliloti USDA1416 Isolate Nodule
192 2924228884 Sinorhizobium meliloti USDA1581 Isolate Nodule
193 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
194 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
195 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
196 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
197 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
198 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
199 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
200 2936996657 Sinorhizobium meliloti USDA1025 Isolate Nodule
201 2937002841 Sinorhizobium meliloti USDA1006 Isolate Nodule
202 2937009748 Sinorhizobium meliloti USDA1162 Isolate Nodule
203 2937016420 Sinorhizobium meliloti USDA1027 Isolate Nodule
204 2937023124 Sinorhizobium meliloti USDA1335 Isolate Nodule
205 2937029754 Sinorhizobium medicae USDA1624 Isolate Nodule
206 2937036028 Sinorhizobium medicae USDA1608 Isolate Nodule
207 2937042894 Sinorhizobium meliloti USDA1687 Isolate Nodule
208 2937049772 Sinorhizobium meliloti USDA1691 Isolate Nodule
209 2937056579 Sinorhizobium meliloti USDA1357 Isolate Nodule
210 2937063883 Sinorhizobium meliloti USDA1808 Isolate Nodule
211 2937071275 Sinorhizobium meliloti USDA1623 Isolate Nodule
212 2937078374 Sinorhizobium medicae USDA1004 Isolate Nodule
213 2937084907 Sinorhizobium medicae USDA1664 Isolate Nodule
214 2937091812 Sinorhizobium meliloti USDA1221 Isolate Nodule
215 2937098957 Sinorhizobium meliloti USDA1519 Isolate Nodule
216 2937106411 Sinorhizobium meliloti USDA1214 Isolate Nodule
217 2937113482 Sinorhizobium meliloti USDA1180 Isolate Nodule
218 2937119839 Sinorhizobium meliloti USDA1790 Isolate Nodule
219 2937126314 Sinorhizobium meliloti USDA1612 Isolate Nodule
220 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
221 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
222 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
223 2957375807 Sinorhizobium medicae USDA1632 Isolate Nodule
224 2957382221 Sinorhizobium meliloti USDA1919 Isolate Nodule
225 2957388812 Sinorhizobium meliloti USDA1195 Isolate Nodule
226 2957395598 Sinorhizobium meliloti USDA1237 Isolate Nodule
227 2957402308 Sinorhizobium meliloti USDA1794 Isolate Nodule
228 2957408893 Sinorhizobium meliloti USDA1163 Isolate Nodule
229 2957415311 Sinorhizobium meliloti USDA1724 Isolate Nodule
230 2957422303 Sinorhizobium meliloti USDA1497 Isolate Nodule
231 2957430029 Sinorhizobium meliloti USDA1590 Isolate Nodule
232 2957437181 Sinorhizobium medicae USDA1694 Isolate Nodule
233 2957443900 Sinorhizobium meliloti USDA1734 Isolate Nodule
234 2957450854 Sinorhizobium meliloti USDA1655 Isolate Nodule
235 2957457609 Sinorhizobium meliloti USDA1751 Isolate Nodule
236 2957464669 Sinorhizobium meliloti USDA1520 Isolate Nodule
237 2957471148 Sinorhizobium meliloti USDA1204 Isolate Nodule
238 2957478035 Sinorhizobium meliloti USDA1171 Isolate Nodule
239 2957484790 Sinorhizobium meliloti USDA1464 Isolate Nodule
240 2957491536 Sinorhizobium meliloti USDA1804 Isolate Nodule
241 2957498199 Sinorhizobium meliloti USDA1561 Isolate Nodule
242 2957505466 Sinorhizobium meliloti USDA1696 Isolate Nodule
243 2958071322 Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 Isolate Nodule
244 2960584000 Sinorhizobium meliloti USDA1530 Isolate Nodule
245 2960591022 Sinorhizobium medicae USDA1066 Isolate Nodule
246 2960597568 Sinorhizobium meliloti 3085 Isolate Nodule
247 2960603979 Sinorhizobium meliloti USDA1580 Isolate Nodule
248 2960610863 Sinorhizobium meliloti USDA1792 Isolate Nodule
249 2960617483 Sinorhizobium meliloti USDA1719 Isolate Nodule
250 2960624210 Sinorhizobium meliloti USDA1415 Isolate Nodule
251 2960631154 Sinorhizobium medicae USDA1629 Isolate Nodule
252 2960637947 Sinorhizobium meliloti USDA1202 Isolate Nodule
253 2960645483 Sinorhizobium meliloti USDA1703 Isolate Nodule
254 2960652885 Sinorhizobium meliloti USDA1199 Isolate Nodule
255 2960660292 Sinorhizobium meliloti USDA1883 Isolate Nodule
256 2960667422 Sinorhizobium meliloti USDA1170 Isolate Nodule
257 2960674078 Sinorhizobium meliloti USDA1666 Isolate Nodule
258 2960680706 Sinorhizobium medicae USDA1150 Isolate Nodule
259 2960687367 Sinorhizobium meliloti USDA1462 Isolate Nodule
260 2960693952 Sinorhizobium medicae USDA1630 Isolate Nodule
261 2963644680 Mesorhizobium japonicum R7A Isolate Nodule
262 2964607997 Sinorhizobium meliloti USDA1212 Isolate Nodule
263 2964615318 Sinorhizobium meliloti USDA1248 Isolate Nodule
264 2964621998 Sinorhizobium meliloti USDA1235 Isolate Nodule
265 2964628898 Sinorhizobium meliloti USDA1191 Isolate Nodule
266 2964636051 Sinorhizobium meliloti USDA1594 Isolate Nodule
267 2964643177 Sinorhizobium meliloti USDA1760 Isolate Nodule
268 2964649959 Sinorhizobium meliloti USDA1591 Isolate Nodule
269 2964656573 Sinorhizobium meliloti USDA1308 Isolate Nodule
270 2964663802 Sinorhizobium meliloti USDA1688 Isolate Nodule
271 2964670856 Sinorhizobium meliloti USDA1211 Isolate Nodule
272 2964678106 Sinorhizobium meliloti USDA1210 Isolate Nodule
273 2964685014 Sinorhizobium meliloti USDA1232 Isolate Nodule
274 2964691889 Sinorhizobium meliloti USDA1379 Isolate Nodule
275 2964698721 Sinorhizobium meliloti USDA1656 Isolate Nodule
276 2964705432 Sinorhizobium meliloti USDA1614 Isolate Nodule
277 2964712639 Sinorhizobium meliloti USDA1616 Isolate Nodule
278 2964719344 Sinorhizobium meliloti USDA1456 Isolate Nodule
279 2967664464 Sinorhizobium meliloti USDA1208 Isolate Nodule
280 2967671571 Sinorhizobium meliloti USDA1496 Isolate Nodule
281 2967678726 Sinorhizobium meliloti USDA1467 Isolate Nodule
282 2967686174 Sinorhizobium medicae USDA1641 Isolate Nodule
283 2967693043 Sinorhizobium meliloti USDA1183 Isolate Nodule
284 2967699805 Sinorhizobium meliloti USDA1695 Isolate Nodule
285 2967706974 Sinorhizobium meliloti USDA1206 Isolate Nodule
286 2967714385 Sinorhizobium meliloti USDA1023 Isolate Nodule
287 2967721400 Sinorhizobium meliloti USDA1742 Isolate Nodule
288 2967735183 Sinorhizobium meliloti USDA1710 Isolate Nodule
289 2967742019 Sinorhizobium meliloti USDA1676 Isolate Nodule
290 2967748971 Sinorhizobium meliloti USDA1024A Isolate Nodule
291 2967755722 Sinorhizobium meliloti USDA1302 Isolate Nodule
292 2967762386 Sinorhizobium meliloti USDA1397 Isolate Nodule
293 2967769361 Sinorhizobium meliloti USDA1005 Isolate Nodule
294 2967775926 Sinorhizobium meliloti USDA1678 Isolate Nodule
295 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
296 2970019648 Sinorhizobium meliloti USDA1603 Isolate Nodule
297 2970026789 Sinorhizobium medicae USDA1611 Isolate Nodule
298 2970033650 Sinorhizobium meliloti USDA1565 Isolate Nodule
299 2970040964 Sinorhizobium meliloti USDA1501 Isolate Nodule
300 2970047711 Sinorhizobium meliloti USDA1793 Isolate Nodule
301 2970054988 Sinorhizobium meliloti USDA1031 Isolate Nodule
302 2970061556 Sinorhizobium meliloti USDA1810 Isolate Nodule
303 2970068827 Sinorhizobium meliloti USDA1227 Isolate Nodule
304 2970076120 Sinorhizobium meliloti USDA1706 Isolate Nodule
305 2970082768 Sinorhizobium meliloti USDA1803 Isolate Nodule
306 2970088815 Sinorhizobium meliloti USDA1819 Isolate Nodule
307 2970095765 Sinorhizobium meliloti USDA1225 Isolate Nodule
308 2970102677 Sinorhizobium meliloti USDA1325 Isolate Nodule
309 2970109326 Sinorhizobium meliloti USDA1186 Isolate Nodule
310 2970116247 Sinorhizobium meliloti USDA1566 Isolate Nodule
311 2970122695 Sinorhizobium medicae 3082 Isolate Nodule
312 2970129317 Sinorhizobium meliloti USDA1008 Isolate Nodule
313 2970136068 Sinorhizobium meliloti USDA1699 Isolate Nodule
314 2970143518 Sinorhizobium medicae USDA1652 Isolate Nodule
315 2970149975 Sinorhizobium meliloti USDA1215 Isolate Nodule
316 2970156795 Sinorhizobium meliloti USDA1491 Isolate Nodule
317 2970164137 Sinorhizobium meliloti USDA1018 Isolate Nodule
318 2970170962 Sinorhizobium meliloti USDA1571 Isolate Nodule
319 2970177841 Sinorhizobium meliloti USDA1533 Isolate Nodule
320 2970184632 Sinorhizobium meliloti USDA1593 Isolate Nodule
321 2970191845 Sinorhizobium meliloti USDA1187 Isolate Nodule
322 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
323 2970540015 Mesorhizobium sp. M5C.F.Ca.IN.020.29.1.1 Isolate Nodule
324 2977516862 Sinorhizobium meliloti USDA1791 Isolate Nodule
325 2977523885 Sinorhizobium meliloti USDA1777 Isolate Nodule
326 2977530762 Sinorhizobium medicae USDA1606 Isolate Nodule
327 2977537788 Sinorhizobium meliloti USDA1184 Isolate Nodule
328 2977544691 Sinorhizobium medicae USDA1631 Isolate Nodule
329 2977551784 Sinorhizobium meliloti USDA1035 Isolate Nodule
330 2977558990 Sinorhizobium meliloti USDA1222 Isolate Nodule
331 2977565890 Sinorhizobium meliloti USDA1617 Isolate Nodule
332 2977572785 Sinorhizobium meliloti USDA1767 Isolate Nodule
333 2977579622 Sinorhizobium meliloti USDA1161 Isolate Nodule
334 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
335 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
336 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
337 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
338 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
339 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
340 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
341 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
342 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
343 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
344 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
345 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
346 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
347 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
348 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
349 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
350 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
351 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
352 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
353 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
354 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
355 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
356 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
357 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
358 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
359 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
360 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
361 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
362 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
363 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
364 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
365 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
366 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
367 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
368 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
369 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
370 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
371 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
372 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
373 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
374 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
375 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
376 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
377 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
378 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
379 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
380 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
381 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
382 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
383 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
384 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
385 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
386 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
387 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
388 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
389 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
390 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
391 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
392 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
393 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
394 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
395 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
396 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
397 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
398 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
399 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
400 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
401 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
402 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
403 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
404 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
405 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
406 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
407 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
408 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
409 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
410 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
411 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
412 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
413 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
414 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
415 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
416 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
417 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
418 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
419 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
420 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
421 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
422 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
423 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
424 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
425 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
426 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
427 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
428 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
429 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
430 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
431 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
432 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
433 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
434 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
435 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
436 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
437 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
438 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
439 648276728 Sinorhizobium meliloti BL225C Isolate Nodule
440 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
441 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
442 8003992118 Sinorhizobium meliloti RRI128 Isolate Nodule
443 8003999396 Sinorhizobium medicae WSM1115 Isolate Nodule
444 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
445 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
446 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
447 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
448 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified
449 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified
450 8055617313 Mesorhizobium onobrychidis OM4 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 25.41
Metatranscriptomes 0
Isolates 74.59

Biome Distribution

Category Percentage (%)
Aerial Root 1.03
Bulb 0
Endosphere 7.85
Nodule 54.13
Rhizoplane 2.48
Rhizosphere 11.57
Stem 0
Stem Tuber 0
Unclassified 22.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1000009 3300002987 Bacteria 168868
2 JGI25160J50197_1000028 3300003354 Bacteria 179309
3 JGI25161J50226_1000535 3300003374 Bacteria 16310
4 Ga0055542_1000625 3300003762 Bacteria 29738
5 Ga0055526_1007547 3300003771 Bacteria 5623
6 Ga0055524_1002794 3300003775 Bacteria 8768
7 Ga0055536_1005788 3300003781 Bacteria 5954
8 Ga0055540_1013778 3300003792 Bacteria 2449
9 Ga0058692_1006125 3300003856 Bacteria 3338
10 Ga0058692_1010972 3300003856 Bacteria 2213
11 Ga0055543_1000081 3300004625 Bacteria 84575
12 Ga0065165_1000061 3300005262 Bacteria 179347
13 Ga0070669_100049099 3300005353 Bacteria 3081
14 Ga0070681_10119944 3300005458 Bacteria 2566
15 Ga0070665_100063037 3300005548 Bacteria 3717
16 Ga0068856_100145171 3300005614 Bacteria 2380
17 Ga0075365_10035544 3300006038 Bacteria 3224
18 Ga0075364_10005675 3300006051 Bacteria 7275
19 Ga0075367_10021610 3300006178 Bacteria 3598
20 Ga0075370_10047314 3300006353 Bacteria 2436
21 Ga0079104_1000207 3300006946 Bacteria 82261
22 Ga0099826_10000111 3300006948 Bacteria 38073
23 Ga0114129_10095251 3300009147 Bacteria 4123
24 Ga0105239_10076999 3300010375 Bacteria 3669
25 Ga0157373_10007355 3300013100 Bacteria 8198
26 Ga0157371_10000031 3300013102 Bacteria 230441
27 Ga0157371_10031689 3300013102 Bacteria 3809
28 Ga0157370_10000149 3300013104 Bacteria 85824
29 Ga0171463_1012 3300013249 Bacteria 176554
30 Ga0183363_1310 3300015690 Bacteria 6597
31 Ga0214544_1001214 3300021320 Bacteria 52523
32 Ga0214542_1000307 3300021321 Bacteria 83288
33 Ga0214542_1014165 3300021321 Bacteria 9078
34 Ga0214543_1000012 3300021327 Bacteria 338982
35 Ga0214543_1000195 3300021327 Bacteria 89886
36 Ga0228711_1000011 3300022739 Bacteria 133208
37 Ga0228710_1000283 3300022740 Bacteria 56899
38 Ga0209148_1000032 3300025254 Bacteria 557660
39 Ga0209455_1000098 3300025272 Bacteria 213890
40 Ga0209130_1000068 3300025284 Bacteria 179361
41 Ga0209025_1000203 3300025294 Bacteria 145210
42 Ga0209025_1001255 3300025294 Bacteria 35105
43 Ga0209564_1000081 3300025295 Bacteria 261592
44 Ga0209050_1002413 3300025298 Bacteria 16122
45 Ga0209256_1000408 3300025299 Bacteria 67949
46 Ga0209256_1001098 3300025299 Bacteria 31105
47 Ga0207426_1000155 3300025302 Bacteria 179361
48 Ga0209051_1002665 3300025303 Bacteria 12491
49 Ga0209257_1002986 3300025304 Bacteria 15396
50 Ga0207707_10033023 3300025912 Bacteria 4530
51 Ga0207657_10043787 3300025919 Bacteria 3940
52 Ga0207689_10022326 3300025942 Bacteria 5321
53 Ga0209281_1000028 3300027111 Bacteria 440027
54 Ga0209281_1000087 3300027111 Bacteria 246142
55 Ga0209371_1000035 3300027312 Bacteria 368979
56 Ga0209371_1004171 3300027312 Bacteria 6448
57 Ga0209282_1000008 3300027666 Bacteria 248526
58 Ga0209282_1010635 3300027666 Bacteria 5823
59 Ga0307515_10000136 3300028794 Bacteria 174265
60 Ga0307515_10001908 3300028794 Bacteria 46296
61 Ga0307515_10003222 3300028794 Bacteria 34542
62 Ga0268256_1000037 3300030500 Bacteria 367024
63 Ga0268256_1011882 3300030500 Bacteria 2723
64 Ga0316181_1179581 3300030744 Bacteria 2793
65 Ga0307513_10000302 3300031456 Bacteria 70793
66 Ga0307412_10044951 3300031911 Bacteria 2884
67 Ga0315914_1000011 3300031967 Bacteria 170175
68 Ga0315913_1000008 3300033430 Bacteria 155397
69 Ga0315915_1000009 3300033464 Bacteria 252178
70 Ga0395905_0000398 3300037471 Bacteria 61654
71 Ga0436364_0607913 3300037853 Bacteria 10259
72 Ga0436363_1629600 3300039450 Bacteria 4758
73 Ga0450906_004595 3300042145 Bacteria 2881
74 Ga0450918_005244 3300042531 Bacteria 2336
75 Ga0451577_0000600 3300042876 Bacteria 57931
76 Ga0451577_0064735 3300042876 Bacteria 3260
77 Ga0453684_0000005 3300044712 Bacteria 1431632
78 Ga0495625_0014417 3300046660 Bacteria 6310
79 Ga0496109_0111251 3300048912 Bacteria 2547
80 Ga0496111_0000648 3300048914 Bacteria 18323
81 Ga0496116_0000061 3300048919 Bacteria 271860
82 Ga0496116_0035222 3300048919 Bacteria 3518
83 Ga0496117_0000030 3300048920 Bacteria 389141
84 Ga0496118_0000621 3300048921 Bacteria 58251
85 Ga0496118_0013278 3300048921 Bacteria 7807
86 Ga0496119_0028330 3300048922 Bacteria 3824
87 Ga0496120_0000047 3300048923 Bacteria 190569
88 Ga0496120_0072965 3300048923 Bacteria 1879
89 Ga0496121_0000005 3300048924 Bacteria 1034486
90 Ga0496122_0000072 3300048925 Bacteria 222436
91 Ga0496122_0000076 3300048925 Bacteria 218690
92 Ga0496122_0001427 3300048925 Bacteria 38717
93 Ga0496122_0016148 3300048925 Bacteria 7092
94 Ga0496122_0026763 3300048925 Bacteria 4957
95 Ga0496122_0061707 3300048925 Bacteria 2749
96 Ga0496123_0000023 3300048926 Bacteria 346894
97 Ga0496123_0000035 3300048926 Bacteria 267288
98 Ga0496123_0002899 3300048926 Bacteria 20081
99 Ga0496123_0029608 3300048926 Bacteria 4025
100 Ga0496124_0000080 3300048927 Bacteria 210439
101 Ga0496124_0019577 3300048927 Bacteria 6290
102 Ga0496124_0023765 3300048927 Bacteria 5587
103 Ga0496124_0086529 3300048927 Bacteria 2564
104 Ga0496124_0100846 3300048927 Bacteria 2339
105 Ga0496125_0000159 3300048928 Bacteria 151205
106 Ga0496125_0010524 3300048928 Bacteria 9353
107 Ga0496126_0000397 3300048929 Bacteria 89305
108 Ga0496126_0062830 3300048929 Bacteria 3330
109 Ga0501043_0129983 3300049579 Bacteria 1973
110 Ga0501067_0044748 3300049583 Bacteria 2459
111 nmdc:mga00v17_44127_c1 3300050491 Bacteria 2687
112 nmdc:mga00v17_4_c1 3300050491 Bacteria 238758
113 nmdc:mga00v17_712_c2 3300050491 Bacteria 14276
114 nmdc:mga0yw44_75_c1 3300050492 Bacteria 35906
115 nmdc:mga05p37_94036_c1 3300050507 Bacteria 3693
116 nmdc:mga0sz30_159_c1 3300050516 Bacteria 24845
117 Ga0500560_007510 3300053107 Bacteria 2570
118 Ga0500607_051076 3300053121 Bacteria 2200
119 Ga0500559_0005714 3300053136 Bacteria 5687
120 Ga0500561_0000076 3300053137 Bacteria 19089
121 Ga0500573_0003555 3300053140 Bacteria 8071
122 Ga0500636_0000009 3300053177 Bacteria 155504
123 Ga0500636_0000853 3300053177 Bacteria 16378

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2899792073 2899794722 474
2 iso_pu_bacteria 2970540015 2970545681 498
3 iso_pu_bacteria 2970068827 2970074741 509
4 iso_pu_bacteria 2551306093 2551745557 514
5 3300053136 Ga0500559_0005714 Ga0500559_0005714_217_1809 520
6 3300042876 Ga0451577_0000600 Ga0451577_0000600_4526_6112 523
7 3300044712 Ga0453684_0000005 Ga0453684_0000005_321715_323301 523
8 3300048919 Ga0496116_0035222 Ga0496116_0035222_607_2247 523
9 iso_pu_bacteria 2510461069 2510840995 524
10 iso_pu_bacteria 2523231067 2523468515 524
11 iso_pu_bacteria 2738543031 2739348344 524
12 3300037853 Ga0436364_0607913 Ga0436364_0607913_7042_8664 526
13 iso_pu_bacteria 2904578770 2904582590 526
14 iso_pu_bacteria 2503198000 2503198070 527
15 iso_pu_bacteria 2508501127 2509140257 527
16 iso_pu_bacteria 2512875016 2512934447 527
17 iso_pu_bacteria 2588253730 2588520618 527
18 iso_pu_bacteria 2643221568 2643854378 527
19 iso_pu_bacteria 2643221595 2643985027 527
20 iso_pu_bacteria 2643221637 2644209557 527
21 iso_pu_bacteria 2643221718 2644653085 527
22 iso_pu_bacteria 2791355123 2792746579 527
23 iso_pu_bacteria 2841734538 2841735856 527
24 iso_pu_bacteria 2871474448 2871478382 527
25 iso_pu_bacteria 2874168670 2874171777 527
26 iso_pu_bacteria 2876363079 2876363291 527
27 iso_pu_bacteria 2885312484 2885314672 527
28 iso_pu_bacteria 2885318864 2885322727 527
29 iso_pu_bacteria 2903448605 2903454634 527
30 iso_pu_bacteria 2903521522 2903525241 527
31 iso_pu_bacteria 2903528002 2903532014 527
32 iso_pu_bacteria 2919166419 2919168767 527
33 iso_pu_bacteria 2937836603 2937839151 527
34 iso_pu_bacteria 2958071322 2958076280 527
35 iso_pu_bacteria 2963644680 2963644751 527
36 iso_pu_bacteria 2968083720 2968088973 527
37 iso_pu_bacteria 2970524798 2970525534 527
38 iso_pu_bacteria 2978969890 2978971453 527
39 iso_pu_bacteria 2984587000 2984588599 527
40 iso_pu_bacteria 637000159 637077619 527
41 iso_pu_bacteria 8055617313 8055617381 527
42 3300028794 Ga0307515_10001908 Ga0307515_1000190814 528
43 3300042876 Ga0451577_0064735 Ga0451577_0064735_40_1644 528
44 iso_pu_bacteria 2537561587 2537873058 528
45 iso_pu_bacteria 2554235003 2554244723 528
46 iso_pu_bacteria 2558860242 2559297438 528
47 iso_pu_bacteria 2599185210 2599604962 528
48 iso_pu_bacteria 2600255279 2601611427 528
49 iso_pu_bacteria 2600255308 2601748152 528
50 iso_pu_bacteria 2643221582 2643921679 528
51 iso_pu_bacteria 2643221599 2644005762 528
52 iso_pu_bacteria 2643221693 2644523079 528
53 iso_pu_bacteria 2765235802 2765467235 528
54 iso_pu_bacteria 2808606387 2808989558 528
55 iso_pu_bacteria 2818991439 2819561238 528
56 iso_pu_bacteria 2838675328 2838679607 528
57 iso_pu_bacteria 2838714209 2838718964 528
58 iso_pu_bacteria 2838719591 2838723963 528
59 iso_pu_bacteria 2838724970 2838729285 528
60 iso_pu_bacteria 2839993093 2839996454 528
61 iso_pu_bacteria 2841846520 2841850945 528
62 iso_pu_bacteria 2841859092 2841861939 528
63 iso_pu_bacteria 2842124991 2842129984 528
64 iso_pu_bacteria 2842130223 2842134274 528
65 iso_pu_bacteria 2842152218 2842156270 528
66 iso_pu_bacteria 2842170452 2842175210 528
67 iso_pu_bacteria 2842175837 2842180126 528
68 iso_pu_bacteria 2842187318 2842191455 528
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465 3300048914 Ga0496111_0000648 Ga0496111_0000648_4010_5611 533
466 3300048923 Ga0496120_0072965 Ga0496120_0072965_33_1634 533
467 3300048924 Ga0496121_0000005 Ga0496121_0000005_937771_939372 533
468 3300048925 Ga0496122_0000072 Ga0496122_0000072_44025_45626 533
469 3300048925 Ga0496122_0001427 Ga0496122_0001427_10462_12093 533
470 3300048925 Ga0496122_0016148 Ga0496122_0016148_4369_5970 533
471 3300048925 Ga0496122_0026763 Ga0496122_0026763_1116_2717 533
472 3300048926 Ga0496123_0000035 Ga0496123_0000035_88877_90478 533
473 3300048926 Ga0496123_0002899 Ga0496123_0002899_575_2206 533
474 3300048926 Ga0496123_0029608 Ga0496123_0029608_1556_3157 533
475 3300048927 Ga0496124_0086529 Ga0496124_0086529_613_2214 533
476 3300048927 Ga0496124_0100846 Ga0496124_0100846_126_1727 533
477 3300048928 Ga0496125_0000159 Ga0496125_0000159_61890_63491 533
478 3300048929 Ga0496126_0062830 Ga0496126_0062830_1657_3297 533
479 3300050491 nmdc:mga00v17_712_c2 nmdc:mga00v17_712_c2_418_2019 533
480 3300053140 Ga0500573_0003555 Ga0500573_0003555_4431_6032 533
481 iso_pu_bacteria 2767802442 2770198740 533
482 iso_pu_bacteria 2775506902 2776273042 533
483 iso_pu_bacteria 2775506904 2776282115 533
484 iso_pu_bacteria 2840764183 2840770395 533

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

299

451

0.95

PF00005

ABC_tran

ABC transporter

24

182

0.92

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

502

536

0.92

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

233

279

0.87

PF13401

AAA_22

AAA domain

305

487

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.9305 275 511
5xu1-assembly1.cif.gz_B structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.9292 6 240
7d06-assembly1.cif.gz_B cryo em structure of the nucleotide free acinetobacter mlafedb complex 0.9271 274 527
7ch8-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with adp-v 0.9238 275 527
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.9234 6 260
ID Description Score Start End Superfamily
af_P33916_272_529_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9826 273 528 3.40.50.300
af_P0AAG0_1_323_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9761 6 262 3.40.50.300
af_P77737_9_333_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9733 275 529 3.40.50.300
af_P75796_311_605_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9719 275 529 3.40.50.300
af_Q2G1F8_275_530_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9717 275 528 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A4P0YB38-F1-model_v4 ABC transporter ATP-binding protein (EC 3.6.3.-) 0.988 366 493 GO:0005524
GO:0016887
AF-X0QJQ9-F1-model_v4 Dipeptide transport ATP-binding protein DppD 0.9829 368 532 GO:0005524
GO:0016887
AF-A0A844W5Y6-F1-model_v4 deleted 0.9819 81 211
AF-A0A2X1PRB0-F1-model_v4 Oligopeptide transporter subunit (EC 3.6.3.-) 0.9789 6 90 GO:0005524
GO:0016887
AF-A0A2S9BS46-F1-model_v4 Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein 0.9764 19 260 GO:0005524
GO:0005886
GO:0016887

Feature Viewer

pLDDT pTM Quality
89.73 0.74 High
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Predicted Structure (AlphaFold2)

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