F439191

General Info

Members Datasets Scaffolds Average Seq Length
417 281 297 583

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2791355222|2793183798
Length 628
Sequence VTNSPFSEEQAALLNTLLPTLTGTQVQWLNGFLAFYGGGTGVTPIENGLTAAPDIAAASSVLAAAPGAAAIAEAVQVQAGAPREATVLFGSQTGNSQRLAGRLADKLKALGFEVTLSAMNVYKPANLKKTAHLFIVASTHGEGDPPDNALPFYEFLYSKRASGLEGLKYSVLALGDTSYEFFCKTGRDFDERLAELGAERIADRVECDLDFEEPASLWFGKVLDAVQASVAGGAAVASQAVSAPAADSQGTENLYSRTNPFRAEVLTTINLNGRGSDRETRHLELSLEGSGLSYQPGDCVGIYPENDPALVDAIIAQMNWKPNEIVLPERQGEDATLRGALLRHFEITVLTRPLLEKAQSYSADGRLAELLKPENKDELRSYVNGRDLLDLLQDFGPWTLPAGAVTTVLRKLPPRLYSIASSNKANPDEVHLTIRKVEYESHGRKRGGVCSVQVSERLEAGDTLPLFIQENPNFKLPADPSTPVIMIGPGTGVAPFRAFLEEREELGSEGKTWLFYGDRHFVTDFLYQTDWQRMLNSGALSKLEVAFSRDSEEKVYVQHRMLEHAAELYGWLQEGAHIYVCGDEKHMAHDVHKALLTIVEQQGGLDSEAAAAYVAELQATQRYQRDVY

Samples

Sample ID Description Type Environment
1 2511231025 Pantoea sp. YR343 Isolate Rhizosphere
2 2511231035 Pantoea sp. GM01 Isolate Rhizosphere
3 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
4 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
5 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
6 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
7 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
8 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
9 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
10 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
11 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
12 2599185299 Pantoea ananatis NFR11 Isolate Rhizoplane
13 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
14 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
15 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
16 2608642108 Pantoea agglomerans NFPP29 Isolate Rhizoplane
17 2643221582 Rhizobium sp. Root651 Isolate Unclassified
18 2643221693 Rhizobium sp. Root491 Isolate Unclassified
19 2648501693 Pantoea ananatis B1-9 Isolate Rhizosphere
20 2684622997 Pantoea ananatis NFIX48 Isolate Rhizoplane
21 2687453129 Halotalea alkalilenta IHB B 13600 Isolate Unclassified
22 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
23 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
24 2738541295 Bacillus sp. OK085 Isolate Unclassified
25 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
26 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
27 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
28 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
29 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
30 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
31 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
32 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
33 2808606414 Pantoea sp. SJZ147 Isolate Rhizosphere
34 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
35 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
36 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
37 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
38 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
39 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
40 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
41 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
42 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
43 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
44 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
45 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
46 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
47 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
48 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
49 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
50 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
51 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
52 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
53 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
54 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
55 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
56 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
57 2844528606 Pantoea sp. R-72498 v. 2 Isolate Unclassified
58 2847085930 Erwinia persicina B64 Isolate Bulb
59 2847797336 Pantoea ananatis NN08200 Isolate Unclassified
60 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
61 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
62 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
63 2865014394 Pantoea sp. R-71966 Isolate Unclassified
64 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
65 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
66 2876601092 Pantoea endophytica 596 Isolate Unclassified
67 2881609920 Pantoea sp. ARC607 Isolate Rhizosphere
68 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
69 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
70 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
71 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
72 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
73 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
74 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
75 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
76 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere
77 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
78 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
79 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
80 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
81 2922554459 Rhodococcus sp. 66b Isolate Unclassified
82 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
83 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
84 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
85 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
86 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
87 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
88 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
89 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
90 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
91 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
92 2945951305 Pantoea agglomerans W2I1 Isolate Rhizosphere
93 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
94 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
95 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
96 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
97 2978975091 Pantoea anthophila SORGH_AS 797 Isolate Unclassified
98 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
99 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
100 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
101 2984494565 Pantoea ananatis SORGH_AS197 Isolate Aerial Root
102 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
103 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
104 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
105 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
106 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
107 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
108 2990261002 Pantoea ananatis SORGH_AS213 Isolate Aerial Root
109 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
110 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
111 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
112 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
113 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
114 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
115 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
116 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
117 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
118 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
119 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
120 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
121 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
122 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
123 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
124 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
125 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
126 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
127 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
128 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
129 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
130 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
131 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
132 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
133 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
134 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
135 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
136 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
137 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
138 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
139 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
140 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
141 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
142 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
143 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
144 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
145 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
146 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
147 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
148 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
149 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
150 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
151 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
152 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
153 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
154 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
155 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
156 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
157 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
158 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
159 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
161 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
162 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
163 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
164 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
165 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
166 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
167 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
168 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
169 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
170 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
171 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
172 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
173 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
174 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
175 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
176 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
177 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
178 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
179 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
180 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
181 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
182 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
183 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
184 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
185 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
186 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
187 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
188 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
189 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
190 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
191 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
192 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
193 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
194 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
195 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
196 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
197 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
198 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
199 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
200 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
201 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
202 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
203 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
204 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
205 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
206 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
207 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
208 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
209 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
210 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
211 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
212 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
213 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
214 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
215 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
216 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
217 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
218 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
219 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
220 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
221 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
222 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
223 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
224 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
225 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
226 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
227 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
228 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
229 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
230 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
231 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
232 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
233 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
234 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
235 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
236 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
237 3300049132 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
238 3300049134 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
239 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
240 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
241 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
242 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
243 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
244 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
245 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
246 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
247 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
248 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
249 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
250 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
251 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
252 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
253 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
254 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
255 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
256 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
257 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
258 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
259 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
260 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
261 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
262 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
263 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
264 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
265 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
266 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
267 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
268 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
269 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
270 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
271 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
272 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified
273 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
274 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
275 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
276 8016733728 Pantoea sp. SORGH_AS 659 Isolate Unclassified
277 8019499862 Kluyvera sp. 1366 Isolate Rhizosphere
278 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
279 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
280 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
281 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 70.74
Metatranscriptomes 0.48
Isolates 28.78

Biome Distribution

Category Percentage (%)
Aerial Root 1.44
Bulb 0.24
Endosphere 7.91
Nodule 5.52
Rhizoplane 3.6
Rhizosphere 55.88
Stem 0
Stem Tuber 0
Unclassified 25.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24746J21847_1002018 3300001977 Bacteria 3242
2 JGI24739J22299_10000117 3300001989 Bacteria 24990
3 rootH2_10191122 3300003320 Bacteria 5045
4 Ga0055538_1000167 3300003751 Bacteria 42805
5 Ga0058692_1000264 3300003856 Bacteria 28368
6 Ga0058692_1001495 3300003856 Bacteria 8567
7 Ga0058692_1001792 3300003856 Bacteria 7593
8 Ga0058692_1003587 3300003856 Bacteria 4766
9 Ga0065704_10091370 3300005289 Bacteria 2722
10 Ga0070658_10001028 3300005327 Bacteria 23881
11 Ga0070658_10014180 3300005327 Bacteria 6397
12 Ga0070676_10070176 3300005328 Bacteria 2101
13 Ga0070661_100016149 3300005344 Bacteria 5271
14 Ga0070708_100016770 3300005445 Bacteria 6087
15 Ga0070662_100000316 3300005457 Bacteria 28731
16 Ga0068867_100000163 3300005459 Bacteria 43490
17 Ga0068867_100000691 3300005459 Bacteria 22415
18 Ga0070706_100031918 3300005467 Bacteria 4856
19 Ga0070706_100063955 3300005467 Unclassified 3400
20 Ga0070698_100017892 3300005471 Bacteria 7466
21 Ga0070697_100012535 3300005536 Bacteria 6642
22 Ga0070696_100001939 3300005546 Bacteria 13629
23 Ga0070665_100002030 3300005548 Bacteria 22776
24 Ga0070665_100026804 3300005548 Bacteria 5805
25 Ga0070664_100001422 3300005564 Bacteria 19095
26 Ga0075368_10008725 3300006042 Bacteria 3624
27 Ga0075363_100031777 3300006048 Bacteria 2739
28 Ga0075364_10000284 3300006051 Bacteria 24849
29 Ga0075364_10012480 3300006051 Bacteria 5199
30 Ga0075364_10013383 3300006051 Bacteria 5041
31 Ga0075364_10024585 3300006051 Bacteria 3826
32 Ga0075369_10004361 3300006186 Bacteria 5219
33 Ga0075366_10017134 3300006195 Bacteria 4166
34 Ga0075370_10008602 3300006353 Bacteria 5261
35 Ga0075428_100001470 3300006844 Bacteria 25215
36 Ga0079104_1000029 3300006946 Bacteria 207648
37 Ga0099826_10023258 3300006948 Bacteria 4621
38 Ga0105251_10002237 3300009011 Bacteria 15432
39 Ga0105251_10018888 3300009011 Bacteria 3654
40 Ga0105251_10023820 3300009011 Bacteria 3152
41 Ga0105251_10032135 3300009011 Bacteria 2618
42 Ga0105244_10001427 3300009036 Bacteria 19333
43 Ga0105244_10004959 3300009036 Bacteria 8990
44 Ga0105244_10005031 3300009036 Bacteria 8894
45 Ga0105244_10017415 3300009036 Bacteria 4060
46 Ga0105244_10053891 3300009036 Bacteria 2042
47 Ga0105250_10001972 3300009092 Bacteria 10625
48 Ga0105250_10015466 3300009092 Bacteria 3123
49 Ga0111539_10007782 3300009094 Bacteria 13681
50 Ga0105243_10000023 3300009148 Bacteria 202230
51 Ga0105243_10000139 3300009148 Bacteria 83070
52 Ga0105237_10001443 3300009545 Bacteria 31393
53 Ga0105239_10003534 3300010375 Bacteria 19130
54 Ga0105246_10010295 3300011119 Bacteria 5779
55 Ga0157373_10000301 3300013100 Bacteria 40059
56 Ga0157373_10002103 3300013100 Bacteria 15081
57 Ga0157373_10004141 3300013100 Bacteria 10938
58 Ga0157373_10004195 3300013100 Bacteria 10867
59 Ga0157373_10014678 3300013100 Bacteria 5741
60 Ga0157371_10000004 3300013102 Bacteria 512593
61 Ga0157371_10000349 3300013102 Bacteria 59337
62 Ga0157371_10045530 3300013102 Bacteria 3122
63 Ga0157370_10000188 3300013104 Bacteria 77439
64 Ga0157370_10000735 3300013104 Bacteria 41132
65 Ga0157370_10001424 3300013104 Bacteria 29698
66 Ga0157370_10005765 3300013104 Bacteria 13841
67 Ga0157369_10105591 3300013105 Bacteria 2999
68 Ga0157372_10001308 3300013307 Bacteria 26945
69 Ga0157372_10112219 3300013307 Bacteria 3123
70 Ga0157372_10185738 3300013307 Bacteria 2407
71 Ga0157372_10248068 3300013307 Bacteria 2066
72 Ga0157376_10008780 3300014969 Bacteria 7310
73 Ga0182006_1002880 3300015261 Bacteria 9142
74 Ga0213876_10023886 3300021384 Bacteria 3227
75 Ga0209784_100061 3300025224 Bacteria 164590
76 Ga0209566_100314 3300025225 Bacteria 43901
77 Ga0209437_100100 3300025233 Bacteria 228479
78 Ga0209675_1001583 3300025291 Bacteria 12876
79 Ga0209676_1000808 3300025292 Bacteria 40975
80 Ga0209025_1001737 3300025294 Bacteria 26190
81 Ga0209025_1008751 3300025294 Bacteria 7207
82 Ga0209025_1011588 3300025294 Bacteria 5784
83 Ga0207696_1000533 3300025711 Bacteria 31089
84 Ga0207696_1021269 3300025711 Bacteria 2080
85 Ga0207655_1000024 3300025728 Bacteria 459774
86 Ga0207655_1002106 3300025728 Bacteria 16650
87 Ga0207655_1002278 3300025728 Bacteria 15801
88 Ga0207655_1005083 3300025728 Bacteria 9093
89 Ga0207655_1024305 3300025728 Bacteria 2973
90 Ga0207713_1000007 3300025735 Bacteria 564979
91 Ga0207713_1002258 3300025735 Bacteria 14242
92 Ga0207713_1034856 3300025735 Bacteria 2180
93 Ga0207705_10002001 3300025909 Bacteria 15842
94 Ga0207684_10001605 3300025910 Bacteria 24021
95 Ga0207695_10064461 3300025913 Bacteria 3772
96 Ga0207671_10009589 3300025914 Bacteria 8069
97 Ga0207649_10006187 3300025920 Bacteria 6496
98 Ga0207646_10077422 3300025922 Bacteria 2972
99 Ga0207706_10002274 3300025933 Bacteria 18757
100 Ga0207709_10000185 3300025935 Bacteria 83062
101 Ga0207709_10000197 3300025935 Bacteria 80360
102 Ga0207679_10000844 3300025945 Bacteria 19691
103 Ga0207679_10005697 3300025945 Bacteria 7810
104 Ga0207668_10048154 3300025972 Bacteria 2923
105 Ga0207648_10000325 3300026089 Bacteria 52254
106 Ga0207648_10000507 3300026089 Bacteria 43469
107 Ga0209281_1000118 3300027111 Bacteria 208448
108 Ga0209371_1000009 3300027312 Bacteria 963030
109 Ga0209371_1000083 3300027312 Bacteria 184176
110 Ga0209371_1000346 3300027312 Bacteria 50802
111 Ga0209371_1000351 3300027312 Bacteria 50314
112 Ga0209371_1000450 3300027312 Bacteria 41098
113 Ga0209371_1000569 3300027312 Bacteria 33436
114 Ga0209371_1000597 3300027312 Bacteria 32346
115 Ga0209371_1002610 3300027312 Bacteria 9885
116 Ga0209371_1003511 3300027312 Bacteria 7561
117 Ga0209813_10000270 3300027866 Bacteria 14588
118 Ga0268256_1000010 3300030500 Bacteria 963034
119 Ga0268256_1000074 3300030500 Bacteria 184102
120 Ga0268256_1000293 3300030500 Bacteria 50802
121 Ga0268256_1000294 3300030500 Bacteria 50324
122 Ga0268256_1000682 3300030500 Bacteria 25582
123 Ga0268256_1001044 3300030500 Bacteria 18563
124 Ga0268256_1003991 3300030500 Bacteria 6358
125 Ga0265327_10000451 3300031251 Bacteria 73966
126 Ga0265327_10000521 3300031251 Bacteria 66467
127 Ga0265316_10000415 3300031344 Bacteria 48828
128 Ga0307408_100000015 3300031548 Bacteria 360044
129 Ga0307408_100000175 3300031548 Bacteria 72054
130 Ga0307406_10000168 3300031901 Bacteria 39257
131 Ga0307407_10000053 3300031903 Bacteria 50149
132 Ga0307407_10000288 3300031903 Bacteria 14849
133 Ga0307407_10012240 3300031903 Bacteria 4116
134 Ga0307412_10000025 3300031911 Bacteria 235413
135 Ga0307412_10000071 3300031911 Bacteria 106188
136 Ga0307416_100000455 3300032002 Bacteria 21016
137 Ga0307414_10000003 3300032004 Bacteria 519751
138 Ga0307414_10007785 3300032004 Bacteria 6039
139 Ga0307411_10067218 3300032005 Bacteria 2411
140 Ga0307415_100042231 3300032126 Bacteria 3034
141 Ga0400483_200327 3300039062 Bacteria 7424
142 Ga0400483_257434 3300039062 Bacteria 4304
143 Ga0436361_0005490 3300039447 Bacteria 8745
144 Ga0436361_0193530 3300039447 Bacteria 5413
145 Ga0436361_0267422 3300039447 Bacteria 2502
146 Ga0436361_0800433 3300039447 Bacteria 4600
147 Ga0436361_0952219 3300039447 Bacteria 3284
148 Ga0436361_1026764 3300039447 Bacteria 3505
149 Ga0439447_001454 3300041407 Bacteria 8703
150 Ga0439447_003213 3300041407 Bacteria 5818
151 Ga0439466_0000002 3300041411 Bacteria 494198
152 Ga0439432_003756 3300042006 Bacteria 5606
153 Ga0439452_000004 3300042010 Bacteria 764268
154 Ga0450890_000023 3300042127 Bacteria 43592
155 Ga0450890_000060 3300042127 Bacteria 21287
156 Ga0450892_000018 3300042130 Bacteria 17857
157 Ga0450907_000011 3300042146 Bacteria 90100
158 Ga0450893_0000647 3300042532 Bacteria 4976
159 Ga0450893_0001528 3300042532 Bacteria 3554
160 Ga0451577_0000288 3300042876 Bacteria 97988
161 Ga0453684_0001971 3300044712 Bacteria 52708
162 Ga0453684_0034587 3300044712 Bacteria 7010
163 Ga0466970_0007607 3300044765 Bacteria 5431
164 Ga0451576_0000234 3300045051 Bacteria 135387
165 Ga0451576_0116021 3300045051 Bacteria 2788
166 Ga0495591_000010 3300046458 Bacteria 327794
167 Ga0495591_001565 3300046458 Bacteria 13940
168 Ga0495650_0000008 3300046471 Bacteria 688246
169 Ga0495607_0009397 3300046501 Bacteria 6620
170 Ga0495606_0000399 3300046507 Bacteria 73352
171 Ga0495631_0023662 3300046518 Bacteria 2845
172 Ga0495644_0005570 3300046523 Bacteria 4914
173 Ga0495648_0002397 3300046524 Bacteria 17399
174 Ga0495648_0005970 3300046524 Bacteria 10014
175 Ga0495654_0000036 3300046530 Bacteria 191434
176 Ga0495654_0000089 3300046530 Bacteria 102765
177 Ga0495633_0032718 3300046558 Bacteria 2511
178 Ga0495668_0000294 3300046616 Bacteria 68626
179 Ga0495611_0015268 3300046648 Bacteria 3283
180 Ga0495588_0007069 3300046674 Bacteria 5087
181 Ga0495671_0003197 3300046692 Bacteria 10176
182 Ga0495649_0020617 3300046694 Bacteria 3696
183 Ga0495660_0000184 3300046810 Bacteria 67383
184 Ga0495660_0017148 3300046810 Bacteria 4170
185 Ga0495672_0000003 3300047320 Bacteria 728845
186 Ga0495672_0000103 3300047320 Bacteria 136164
187 Ga0495679_001435 3300047446 Bacteria 13540
188 Ga0495673_0000011 3300047469 Bacteria 674140
189 Ga0495681_0009138 3300047470 Bacteria 6136
190 Ga0496101_0000097 3300048904 Bacteria 91033
191 Ga0496101_0114731 3300048904 Bacteria 2031
192 Ga0496102_0021550 3300048905 Bacteria 5699
193 Ga0496102_0081966 3300048905 Bacteria 2975
194 Ga0496104_0069679 3300048907 Bacteria 3343
195 Ga0496105_0016832 3300048908 Bacteria 5846
196 Ga0496106_0012240 3300048909 Bacteria 6333
197 Ga0496113_0000592 3300048916 Bacteria 18089
198 Ga0496116_0000148 3300048919 Bacteria 142458
199 Ga0496116_0000777 3300048919 Bacteria 40580
200 Ga0496116_0048966 3300048919 Bacteria 2831
201 Ga0496116_0054417 3300048919 Bacteria 2636
202 Ga0496117_0000002 3300048920 Bacteria 2483758
203 Ga0496117_0000078 3300048920 Bacteria 227068
204 Ga0496117_0000116 3300048920 Bacteria 178919
205 Ga0496117_0000847 3300048920 Bacteria 47332
206 Ga0496117_0010219 3300048920 Bacteria 8600
207 Ga0496117_0050839 3300048920 Bacteria 2936
208 Ga0496118_0000059 3300048921 Bacteria 226336
209 Ga0496118_0000906 3300048921 Bacteria 46311
210 Ga0496118_0001167 3300048921 Bacteria 40506
211 Ga0496118_0023917 3300048921 Bacteria 5289
212 Ga0496119_0000472 3300048922 Bacteria 54962
213 Ga0496119_0000586 3300048922 Bacteria 49220
214 Ga0496119_0002537 3300048922 Bacteria 19868
215 Ga0496119_0002801 3300048922 Bacteria 18693
216 Ga0496119_0004054 3300048922 Bacteria 14781
217 Ga0496119_0010058 3300048922 Bacteria 8000
218 Ga0496119_0019425 3300048922 Bacteria 5006
219 Ga0496120_0000068 3300048923 Bacteria 166108
220 Ga0496120_0000166 3300048923 Bacteria 111571
221 Ga0496120_0000498 3300048923 Bacteria 61391
222 Ga0496120_0000602 3300048923 Bacteria 54478
223 Ga0496120_0001364 3300048923 Bacteria 29931
224 Ga0496120_0003321 3300048923 Bacteria 14781
225 Ga0496120_0005171 3300048923 Bacteria 10536
226 Ga0496121_0000001 3300048924 Bacteria 1830318
227 Ga0496121_0000052 3300048924 Bacteria 313410
228 Ga0496121_0001048 3300048924 Bacteria 49171
229 Ga0496121_0009011 3300048924 Bacteria 11565
230 Ga0496122_0000001 3300048925 Bacteria 1827766
231 Ga0496122_0006984 3300048925 Bacteria 12707
232 Ga0496122_0017804 3300048925 Bacteria 6607
233 Ga0496122_0040033 3300048925 Bacteria 3730
234 Ga0496122_0077950 3300048925 Bacteria 2323
235 Ga0496123_0000001 3300048926 Bacteria 1831497
236 Ga0496123_0004643 3300048926 Bacteria 14266
237 Ga0496123_0004673 3300048926 Bacteria 14189
238 Ga0496124_0000682 3300048927 Bacteria 55796
239 Ga0496124_0001210 3300048927 Bacteria 39962
240 Ga0496124_0010943 3300048927 Bacteria 9125
241 Ga0496124_0012037 3300048927 Bacteria 8594
242 Ga0496124_0012184 3300048927 Bacteria 8510
243 Ga0496124_0016551 3300048927 Bacteria 7002
244 Ga0496124_0019835 3300048927 Bacteria 6237
245 Ga0496124_0080607 3300048927 Bacteria 2677
246 Ga0496124_0093525 3300048927 Bacteria 2446
247 Ga0496125_0000001 3300048928 Bacteria 1766138
248 Ga0496125_0002687 3300048928 Bacteria 22658
249 Ga0496125_0006585 3300048928 Bacteria 12510
250 Ga0496125_0013635 3300048928 Bacteria 7980
251 Ga0496125_0034362 3300048928 Bacteria 4470
252 Ga0496126_0036941 3300048929 Bacteria 4563
253 Ga0496126_0062988 3300048929 Bacteria 3325
254 Ga0501343_000344 3300049132 Bacteria 2658
255 Ga0501345_00130 3300049134 Bacteria 2019
256 Ga0495678_000142 3300049459 Bacteria 86788
257 Ga0495682_0000034 3300049460 Bacteria 131806
258 Ga0501032_0000032 3300049569 Bacteria 122607
259 Ga0501032_0002175 3300049569 Bacteria 15429
260 Ga0501032_0090865 3300049569 Bacteria 2026
261 Ga0501034_0000123 3300049571 Bacteria 143688
262 Ga0501036_0064662 3300049572 Bacteria 3096
263 Ga0501037_0000188 3300049573 Bacteria 57466
264 Ga0501037_0000902 3300049573 Bacteria 22160
265 Ga0501037_0020049 3300049573 Bacteria 4936
266 Ga0501037_0073270 3300049573 Bacteria 2490
267 Ga0501038_0000181 3300049574 Bacteria 53767
268 Ga0501038_0044198 3300049574 Bacteria 3872
269 Ga0501039_0000036 3300049575 Bacteria 123633
270 Ga0501040_0012115 3300049576 Bacteria 5645
271 Ga0501042_0000046 3300049578 Bacteria 41284
272 Ga0501043_0000212 3300049579 Bacteria 53127
273 Ga0501070_0000194 3300049586 Bacteria 56971
274 Ga0501070_0005931 3300049586 Bacteria 10416
275 Ga0501070_0012833 3300049586 Bacteria 7061
276 Ga0501074_0002935 3300049590 Bacteria 11979
277 Ga0501075_0025739 3300049591 Bacteria 4324
278 Ga0501227_003063 3300049665 Bacteria 3639
279 Ga0501080_0149556 3300049742 Bacteria 2159
280 Ga0501083_0001827 3300049744 Bacteria 14595
281 Ga0501044_0000632 3300049823 Bacteria 42426
282 Ga0501044_0054707 3300049823 Unclassified 4101
283 Ga0501045_0143448 3300049824 Bacteria 1776
284 nmdc:mga00v17_104_c1 3300050491 Bacteria 50343
285 nmdc:mga00v17_8231_c1 3300050491 Bacteria 5608
286 nmdc:mga0yw44_149_c1 3300050492 Bacteria 21613
287 nmdc:mga06z11_7077_c1 3300050494 Bacteria 4602
288 nmdc:mga04h51_1880_c1 3300050495 Bacteria 4909
289 nmdc:mga07m45_6969_c1 3300050496 Bacteria 5745
290 nmdc:mga0sz30_5550_c1 3300050516 Bacteria 4635
291 Ga0500555_000012 3300053103 Bacteria 249666
292 Ga0500560_000916 3300053107 Bacteria 4649
293 Ga0500618_000278 3300053125 Bacteria 39344
294 Ga0500621_000010 3300053126 Bacteria 169537
295 Ga0500559_0000838 3300053136 Bacteria 19900
296 Ga0500561_0000146 3300053137 Bacteria 13400
297 Ga0500616_0002273 3300053153 Bacteria 16311

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048925 Ga0496122_0077950 Ga0496122_0077950_829_2310 484
2 3300049586 Ga0501070_0005931 Ga0501070_0005931_34_1551 496
3 iso_pu_bacteria 2548877040 2550902568 517
4 3300025294 Ga0209025_1008751 Ga0209025_10087513 518
5 3300013100 Ga0157373_10002103 Ga0157373_1000210312 520
6 3300032004 Ga0307414_10000003 Ga0307414_10000003295 522
7 iso_pu_bacteria 2870782633 2870786698 525
8 3300042130 Ga0450892_000018 Ga0450892_000018_671_2341 528
9 iso_pu_bacteria 2571042143 2571528958 529
10 3300049586 Ga0501070_0012833 Ga0501070_0012833_3908_5572 530
11 3300049573 Ga0501037_0000902 Ga0501037_0000902_7739_9367 531
12 3300005327 Ga0070658_10014180 Ga0070658_100141805 532
13 3300053103 Ga0500555_000012 Ga0500555_000012_205156_206817 532
14 iso_pu_bacteria 2932398195 2932398497 532
15 3300039062 Ga0400483_257434 Ga0400483_257434_309_2066 533
16 iso_pu_bacteria 2870628048 2870628324 533
17 3300003320 rootH2_10191122 rootH2_101911222 534
18 3300032004 Ga0307414_10007785 Ga0307414_100077853 535
19 iso_pu_bacteria 2747842429 2747952186 537
20 iso_pu_bacteria 2831935698 2831936454 537
21 3300013104 Ga0157370_10000735 Ga0157370_100007359 538
22 3300048928 Ga0496125_0034362 Ga0496125_0034362_292_2064 538
23 3300050496 nmdc:mga07m45_6969_c1 nmdc:mga07m45_6969_c1_3665_5437 538
24 3300039447 Ga0436361_0267422 Ga0436361_0267422_637_2352 543
25 3300049132 Ga0501343_000344 Ga0501343_000344_835_2541 544
26 3300049665 Ga0501227_003063 Ga0501227_003063_1051_2826 544
27 3300048904 Ga0496101_0114731 Ga0496101_0114731_331_2016 545
28 3300048909 Ga0496106_0012240 Ga0496106_0012240_349_2034 545
29 3300049573 Ga0501037_0020049 Ga0501037_0020049_308_2128 546
30 3300049591 Ga0501075_0025739 Ga0501075_0025739_52_1872 546
31 3300049742 Ga0501080_0149556 Ga0501080_0149556_142_1962 546
32 3300031548 Ga0307408_100000015 Ga0307408_100000015137 547
33 3300031903 Ga0307407_10000288 Ga0307407_100002884 547
34 3300031911 Ga0307412_10000071 Ga0307412_1000007152 547
35 3300032005 Ga0307411_10067218 Ga0307411_100672181 547
36 3300042127 Ga0450890_000023 Ga0450890_000023_12640_14412 547
37 3300042532 Ga0450893_0000647 Ga0450893_0000647_2145_3917 547
38 3300049569 Ga0501032_0002175 Ga0501032_0002175_4511_6283 547
39 iso_pu_bacteria 2775506735 2775658546 548
40 iso_pu_bacteria 2808606357 2808829328 548
41 iso_pu_bacteria 2808606366 2808878764 548
42 iso_pu_bacteria 2945956166 2945958362 548
43 3300005459 Ga0068867_100000163 Ga0068867_10000016320 549
44 3300009148 Ga0105243_10000139 Ga0105243_1000013962 549
45 3300025935 Ga0207709_10000185 Ga0207709_1000018518 549
46 3300026089 Ga0207648_10000507 Ga0207648_1000050720 549
47 3300048925 Ga0496122_0017804 Ga0496122_0017804_1870_3771 549
48 3300048926 Ga0496123_0004643 Ga0496123_0004643_4846_6747 549
49 3300048928 Ga0496125_0006585 Ga0496125_0006585_3102_5003 549
50 3300044765 Ga0466970_0007607 Ga0466970_0007607_817_2604 550
51 3300005564 Ga0070664_100001422 Ga0070664_1000014226 551
52 3300025945 Ga0207679_10005697 Ga0207679_100056976 551
53 3300025292 Ga0209676_1000808 Ga0209676_10008084 552
54 3300031903 Ga0307407_10012240 Ga0307407_100122402 552
55 3300032126 Ga0307415_100042231 Ga0307415_1000422311 552
56 3300048916 Ga0496113_0000592 Ga0496113_0000592_1799_3505 552
57 3300049569 Ga0501032_0000032 Ga0501032_0000032_95303_97009 552
58 3300049571 Ga0501034_0000123 Ga0501034_0000123_106868_108574 552
59 3300049572 Ga0501036_0064662 Ga0501036_0064662_494_2200 552
60 3300049573 Ga0501037_0000188 Ga0501037_0000188_23805_25511 552
61 3300049574 Ga0501038_0000181 Ga0501038_0000181_31572_33278 552
62 3300049575 Ga0501039_0000036 Ga0501039_0000036_25471_27177 552
63 3300049579 Ga0501043_0000212 Ga0501043_0000212_20490_22196 552
64 3300049586 Ga0501070_0000194 Ga0501070_0000194_30882_32588 552
65 3300049823 Ga0501044_0000632 Ga0501044_0000632_26770_28476 552
66 3300049824 Ga0501045_0143448 Ga0501045_0143448_26_1732 552
67 3300031901 Ga0307406_10000168 Ga0307406_1000016827 553
68 iso_pu_bacteria 2788500588 2791215024 554
69 iso_pu_bacteria 2818991451 2819629398 554
70 iso_pu_bacteria 2904606771 2904610206 554
71 iso_pu_bacteria 2939593269 2939595964 554
72 iso_pu_bacteria 8055531788 8055536141 554
73 3300013100 Ga0157373_10004195 Ga0157373_100041953 555
74 3300049823 Ga0501044_0054707 Ga0501044_0054707_2002_3786 555
75 iso_pu_bacteria 2821123053 2821126890 555
76 iso_pu_bacteria 2838736955 2838740497 555
77 iso_pu_bacteria 2841840854 2841843379 555
78 iso_pu_bacteria 2842140634 2842143100 555
79 iso_pu_bacteria 2857531043 2857535326 555
80 iso_pu_bacteria 2971403814 2971409106 555
81 3300005546 Ga0070696_100001939 Ga0070696_10000193911 556
82 3300006844 Ga0075428_100001470 Ga0075428_10000147026 556
83 3300009094 Ga0111539_10007782 Ga0111539_1000778212 556
84 3300039062 Ga0400483_200327 Ga0400483_200327_2930_4750 556
85 3300049134 Ga0501345_00130 Ga0501345_00130_17_1804 556
86 3300053153 Ga0500616_0002273 Ga0500616_0002273_5164_6942 556
87 3300025291 Ga0209675_1001583 Ga0209675_10015834 557
88 3300053136 Ga0500559_0000838 Ga0500559_0000838_2441_4216 557
89 iso_pu_bacteria 2524023129 2524187464 557
90 iso_pu_bacteria 2738541295 2738816688 557
91 iso_pu_bacteria 2857604169 2857604820 557
92 iso_pu_bacteria 2857609550 2857609703 557
93 iso_pu_bacteria 2916971899 2916972890 557
94 iso_pu_bacteria 2956897341 2956897367 557
95 3300003751 Ga0055538_1000167 Ga0055538_100016735 558
96 3300048927 Ga0496124_0000682 Ga0496124_0000682_22277_24178 558
97 3300049744 Ga0501083_0001827 Ga0501083_0001827_3668_5458 558
98 iso_pu_bacteria 2728368933 2728530529 558
99 iso_pu_bacteria 2818991461 2819683641 558
100 iso_pu_bacteria 2938649242 2938651958 558
101 iso_pu_bacteria 2968558590 2968560810 558
102 iso_pu_bacteria 2988225383 2988231851 558
103 iso_pu_bacteria 2996632988 2996638316 558
104 iso_pu_bacteria 8054465665 8054469382 558
105 3300005548 Ga0070665_100026804 Ga0070665_1000268042 559
106 3300006051 Ga0075364_10013383 Ga0075364_100133832 559
107 3300006946 Ga0079104_1000029 Ga0079104_1000029175 559
108 3300009545 Ga0105237_10001443 Ga0105237_100014432 559
109 3300010375 Ga0105239_10003534 Ga0105239_100035345 559
110 3300025294 Ga0209025_1001737 Ga0209025_100173711 559
111 3300025914 Ga0207671_10009589 Ga0207671_100095892 559
112 3300027111 Ga0209281_1000118 Ga0209281_1000118168 559
113 3300048924 Ga0496121_0009011 Ga0496121_0009011_3109_4845 559
114 iso_pu_bacteria 2511231025 2511379655 559
115 iso_pu_bacteria 2511231035 2511433672 559
116 iso_pu_bacteria 2600255286 2601638607 559
117 iso_pu_bacteria 2728369276 2729907296 559
118 iso_pu_bacteria 2894510363 2894512271 559
119 iso_pu_bacteria 2904113452 2904115188 559
120 3300001989 JGI24739J22299_10000117 JGI24739J22299_100001172 560
121 3300009011 Ga0105251_10002237 Ga0105251_100022376 560
122 3300009036 Ga0105244_10001427 Ga0105244_1000142711 560
123 3300013100 Ga0157373_10004141 Ga0157373_100041413 560
124 3300013104 Ga0157370_10001424 Ga0157370_100014245 560
125 3300025735 Ga0207713_1002258 Ga0207713_10022584 560
126 3300031251 Ga0265327_10000451 Ga0265327_1000045156 560
127 3300031344 Ga0265316_10000415 Ga0265316_1000041528 560
128 3300042006 Ga0439432_003756 Ga0439432_003756_2116_3873 560
129 3300042010 Ga0439452_000004 Ga0439452_000004_297730_299487 560
130 3300048919 Ga0496116_0000777 Ga0496116_0000777_25720_27477 560
131 3300048920 Ga0496117_0000847 Ga0496117_0000847_13059_14816 560
132 3300048927 Ga0496124_0016551 Ga0496124_0016551_4356_6128 560
133 iso_pu_bacteria 2989392574 2989393432 560
134 iso_pu_bacteria 8001522603 8001525350 560
135 3300006051 Ga0075364_10000284 Ga0075364_100002847 561
136 3300025224 Ga0209784_100061 Ga0209784_100061140 561
137 3300025225 Ga0209566_100314 Ga0209566_10031433 561
138 3300031251 Ga0265327_10000521 Ga0265327_1000052158 561
139 3300048924 Ga0496121_0001048 Ga0496121_0001048_31122_32864 561
140 3300050491 nmdc:mga00v17_104_c1 nmdc:mga00v17_104_c1_36686_38428 561
141 iso_pu_bacteria 2599185299 2599927890 561
142 iso_pu_bacteria 2608642108 2608670737 561
143 iso_pu_bacteria 2648501693 2650897349 561
144 iso_pu_bacteria 2684622997 2686354681 561
145 iso_pu_bacteria 2791355222 2793183798 561
146 iso_pu_bacteria 2808606414 2809123999 561
147 iso_pu_bacteria 2844528606 2844531341 561
148 iso_pu_bacteria 2847085930 2847090297 561
149 iso_pu_bacteria 2847797336 2847801551 561
150 iso_pu_bacteria 2865014394 2865016099 561
151 iso_pu_bacteria 2876601092 2876605903 561
152 iso_pu_bacteria 2881609920 2881610594 561
153 iso_pu_bacteria 2904430863 2904431890 561
154 iso_pu_bacteria 2904501621 2904504400 561
155 iso_pu_bacteria 2908669403 2908672857 561
156 iso_pu_bacteria 2909074476 2909077459 561
157 iso_pu_bacteria 2919039151 2919041647 561
158 iso_pu_bacteria 2939602548 2939605861 561
159 iso_pu_bacteria 2945951305 2945954557 561
160 iso_pu_bacteria 2978975091 2978977031 561
161 iso_pu_bacteria 2984494565 2984498392 561
162 iso_pu_bacteria 2990261002 2990263493 561
163 iso_pu_bacteria 8001845381 8001845525 561
164 iso_pu_bacteria 8016733728 8016737446 561
165 iso_pu_bacteria 8019499862 8019502671 561
166 iso_pu_bacteria 8057473075 8057477984 561
167 3300045051 Ga0451576_0000234 Ga0451576_0000234_5880_7622 562
168 3300046616 Ga0495668_0000294 Ga0495668_0000294_22062_23834 562
169 iso_pu_bacteria 8002317523 8002318651 562
170 iso_pu_bacteria 8046991243 8046998210 562
171 3300009036 Ga0105244_10004959 Ga0105244_100049593 563
172 3300009036 Ga0105244_10017415 Ga0105244_100174152 563
173 3300025728 Ga0207655_1002278 Ga0207655_10022787 563
174 3300025728 Ga0207655_1024305 Ga0207655_10243051 563
175 3300042876 Ga0451577_0000288 Ga0451577_0000288_11251_12990 563
176 3300044712 Ga0453684_0001971 Ga0453684_0001971_11252_12991 563
177 3300044712 Ga0453684_0034587 Ga0453684_0034587_698_2437 563
178 3300046458 Ga0495591_000010 Ga0495591_000010_223437_225185 563
179 3300046530 Ga0495654_0000036 Ga0495654_0000036_27444_29192 563
180 3300048927 Ga0496124_0012037 Ga0496124_0012037_5619_7367 563
181 3300048929 Ga0496126_0036941 Ga0496126_0036941_1165_2913 563
182 3300049573 Ga0501037_0073270 Ga0501037_0073270_160_1983 563
183 3300049574 Ga0501038_0044198 Ga0501038_0044198_1740_3569 563
184 3300049590 Ga0501074_0002935 Ga0501074_0002935_138_1961 563
185 3300053125 Ga0500618_000278 Ga0500618_000278_8996_10744 563
186 iso_pu_bacteria 2687453129 2687578687 563
187 3300021384 Ga0213876_10023886 Ga0213876_100238862 564
188 3300003856 Ga0058692_1000264 Ga0058692_10002643 565
189 3300003856 Ga0058692_1001495 Ga0058692_10014953 565
190 3300003856 Ga0058692_1001792 Ga0058692_10017922 565
191 3300003856 Ga0058692_1003587 Ga0058692_10035873 565
192 3300005457 Ga0070662_100000316 Ga0070662_10000031624 565
193 3300006048 Ga0075363_100031777 Ga0075363_1000317772 565
194 3300006051 Ga0075364_10024585 Ga0075364_100245852 565
195 3300009011 Ga0105251_10018888 Ga0105251_100188882 565
196 3300009011 Ga0105251_10023820 Ga0105251_100238202 565
197 3300009011 Ga0105251_10032135 Ga0105251_100321352 565
198 3300009036 Ga0105244_10005031 Ga0105244_100050312 565
199 3300009036 Ga0105244_10053891 Ga0105244_100538911 565
200 3300009092 Ga0105250_10001972 Ga0105250_100019722 565
201 3300009092 Ga0105250_10015466 Ga0105250_100154663 565
202 3300011119 Ga0105246_10010295 Ga0105246_100102952 565
203 3300013100 Ga0157373_10000301 Ga0157373_1000030126 565
204 3300013102 Ga0157371_10000349 Ga0157371_1000034938 565
205 3300013102 Ga0157371_10045530 Ga0157371_100455303 565
206 3300013105 Ga0157369_10105591 Ga0157369_101055912 565
207 3300013307 Ga0157372_10001308 Ga0157372_100013082 565
208 3300013307 Ga0157372_10112219 Ga0157372_101122193 565
209 3300013307 Ga0157372_10185738 Ga0157372_101857381 565
210 3300013307 Ga0157372_10248068 Ga0157372_102480681 565
211 3300015261 Ga0182006_1002880 Ga0182006_10028802 565
212 3300025233 Ga0209437_100100 Ga0209437_100100146 565
213 3300025711 Ga0207696_1000533 Ga0207696_10005332 565
214 3300025711 Ga0207696_1021269 Ga0207696_10212691 565
215 3300025728 Ga0207655_1000024 Ga0207655_1000024286 565
216 3300025728 Ga0207655_1002106 Ga0207655_10021062 565
217 3300025728 Ga0207655_1005083 Ga0207655_10050838 565
218 3300025735 Ga0207713_1000007 Ga0207713_1000007361 565
219 3300025735 Ga0207713_1034856 Ga0207713_10348561 565
220 3300025913 Ga0207695_10064461 Ga0207695_100644611 565
221 3300025933 Ga0207706_10002274 Ga0207706_100022749 565
222 3300025972 Ga0207668_10048154 Ga0207668_100481542 565
223 3300027312 Ga0209371_1000083 Ga0209371_100008333 565
224 3300027312 Ga0209371_1000346 Ga0209371_100034649 565
225 3300027312 Ga0209371_1000351 Ga0209371_100035137 565
226 3300027312 Ga0209371_1000450 Ga0209371_10004503 565
227 3300027312 Ga0209371_1002610 Ga0209371_10026104 565
228 3300027312 Ga0209371_1003511 Ga0209371_10035112 565
229 3300030500 Ga0268256_1000074 Ga0268256_1000074140 565
230 3300030500 Ga0268256_1000293 Ga0268256_100029349 565
231 3300030500 Ga0268256_1000294 Ga0268256_100029416 565
232 3300030500 Ga0268256_1000682 Ga0268256_100068224 565
233 3300030500 Ga0268256_1001044 Ga0268256_100104413 565
234 3300041407 Ga0439447_001454 Ga0439447_001454_2327_4084 565
235 3300041407 Ga0439447_003213 Ga0439447_003213_334_2091 565
236 3300041411 Ga0439466_0000002 Ga0439466_0000002_150911_152668 565
237 3300042146 Ga0450907_000011 Ga0450907_000011_21145_22902 565
238 3300046458 Ga0495591_001565 Ga0495591_001565_8142_9899 565
239 3300046471 Ga0495650_0000008 Ga0495650_0000008_43450_45207 565
240 3300046501 Ga0495607_0009397 Ga0495607_0009397_3146_4903 565
241 3300046507 Ga0495606_0000399 Ga0495606_0000399_43344_45101 565
242 3300046518 Ga0495631_0023662 Ga0495631_0023662_1055_2812 565
243 3300046523 Ga0495644_0005570 Ga0495644_0005570_3023_4780 565
244 3300046524 Ga0495648_0002397 Ga0495648_0002397_9247_11004 565
245 3300046524 Ga0495648_0005970 Ga0495648_0005970_5380_7137 565
246 3300046530 Ga0495654_0000089 Ga0495654_0000089_57509_59266 565
247 3300046648 Ga0495611_0015268 Ga0495611_0015268_901_2658 565
248 3300046692 Ga0495671_0003197 Ga0495671_0003197_2151_3908 565
249 3300046694 Ga0495649_0020617 Ga0495649_0020617_573_2330 565
250 3300046810 Ga0495660_0000184 Ga0495660_0000184_13971_15728 565
251 3300046810 Ga0495660_0017148 Ga0495660_0017148_20_1777 565
252 3300047320 Ga0495672_0000003 Ga0495672_0000003_683562_685319 565
253 3300047320 Ga0495672_0000103 Ga0495672_0000103_67876_69633 565
254 3300047446 Ga0495679_001435 Ga0495679_001435_653_2410 565
255 3300047469 Ga0495673_0000011 Ga0495673_0000011_43715_45472 565
256 3300048904 Ga0496101_0000097 Ga0496101_0000097_642_2396 565
257 3300048905 Ga0496102_0021550 Ga0496102_0021550_3708_5465 565
258 3300048905 Ga0496102_0081966 Ga0496102_0081966_1044_2801 565
259 3300048908 Ga0496105_0016832 Ga0496105_0016832_2390_4147 565
260 3300048919 Ga0496116_0000148 Ga0496116_0000148_140159_141916 565
261 3300048919 Ga0496116_0048966 Ga0496116_0048966_1038_2792 565
262 3300048920 Ga0496117_0000078 Ga0496117_0000078_45285_47042 565
263 3300048920 Ga0496117_0000116 Ga0496117_0000116_24923_26680 565
264 3300048920 Ga0496117_0050839 Ga0496117_0050839_1075_2829 565
265 3300048921 Ga0496118_0000059 Ga0496118_0000059_180027_181784 565
266 3300048921 Ga0496118_0000906 Ga0496118_0000906_23332_25089 565
267 3300048922 Ga0496119_0000472 Ga0496119_0000472_41545_43302 565
268 3300048922 Ga0496119_0000586 Ga0496119_0000586_1937_3694 565
269 3300048922 Ga0496119_0002537 Ga0496119_0002537_807_2561 565
270 3300048922 Ga0496119_0002801 Ga0496119_0002801_1916_3673 565
271 3300048922 Ga0496119_0004054 Ga0496119_0004054_11729_13486 565
272 3300048922 Ga0496119_0019425 Ga0496119_0019425_1927_3681 565
273 3300048923 Ga0496120_0000068 Ga0496120_0000068_80399_82153 565
274 3300048923 Ga0496120_0000166 Ga0496120_0000166_102480_104237 565
275 3300048923 Ga0496120_0000602 Ga0496120_0000602_1937_3694 565
276 3300048923 Ga0496120_0001364 Ga0496120_0001364_26259_28016 565
277 3300048923 Ga0496120_0003321 Ga0496120_0003321_1296_3053 565
278 3300048923 Ga0496120_0005171 Ga0496120_0005171_6831_8585 565
279 3300048924 Ga0496121_0000052 Ga0496121_0000052_190055_191812 565
280 3300048925 Ga0496122_0006984 Ga0496122_0006984_6991_8745 565
281 3300048925 Ga0496122_0040033 Ga0496122_0040033_136_1893 565
282 3300048926 Ga0496123_0004673 Ga0496123_0004673_4384_6138 565
283 3300048927 Ga0496124_0001210 Ga0496124_0001210_5404_7158 565
284 3300048927 Ga0496124_0010943 Ga0496124_0010943_1803_3560 565
285 3300048927 Ga0496124_0012184 Ga0496124_0012184_2569_4323 565
286 3300048928 Ga0496125_0002687 Ga0496125_0002687_4602_6359 565
287 3300049459 Ga0495678_000142 Ga0495678_000142_52303_54060 565
288 3300049460 Ga0495682_0000034 Ga0495682_0000034_86566_88323 565
289 3300053126 Ga0500621_000010 Ga0500621_000010_124399_126156 565
290 iso_pu_bacteria 2537561587 2537877287 565
291 iso_pu_bacteria 2582581304 2585258549 565
292 iso_pu_bacteria 2841846520 2841846609 565
293 iso_pu_bacteria 2841859092 2841860861 565
294 iso_pu_bacteria 2842130223 2842132526 565
295 iso_pu_bacteria 2842170452 2842172767 565
296 iso_pu_bacteria 2842187318 2842189629 565
297 iso_pu_bacteria 2842211629 2842213943 565
298 iso_pu_bacteria 2842224351 2842224439 565
299 iso_pu_bacteria 2842515876 2842517646 565
300 iso_pu_bacteria 2899792073 2899794313 565
301 iso_pu_bacteria 2919114240 2919116739 565
302 iso_pu_bacteria 2926754445 2926754748 565
303 iso_pu_bacteria 2929138655 2929138763 565
304 iso_pu_bacteria 2554235003 2554246183 566
305 iso_pu_bacteria 2558860242 2559293406 566
306 iso_pu_bacteria 2599185210 2599604290 566
307 iso_pu_bacteria 2600255279 2601609574 566
308 iso_pu_bacteria 2600255308 2601746349 566
309 iso_pu_bacteria 2643221582 2643920563 566
310 iso_pu_bacteria 2643221693 2644519628 566
311 iso_pu_bacteria 2738543034 2739365399 566
312 iso_pu_bacteria 2808606387 2808986825 566
313 iso_pu_bacteria 2818991439 2819556896 566
314 iso_pu_bacteria 2838675328 2838677633 566
315 iso_pu_bacteria 2838714209 2838716522 566
316 iso_pu_bacteria 2838719591 2838719678 566
317 iso_pu_bacteria 2838724970 2838727273 566
318 iso_pu_bacteria 2842124991 2842127362 566
319 iso_pu_bacteria 2842152218 2842152305 566
320 iso_pu_bacteria 2842175837 2842175924 566
321 iso_pu_bacteria 2899845264 2899845693 566
322 iso_pu_bacteria 2926760298 2926761917 566
323 iso_pu_bacteria 2933006813 2933006952 566
324 iso_pu_bacteria 2933011516 2933015457 566
325 iso_pu_bacteria 2933594066 2933594155 566
326 iso_pu_bacteria 2979089926 2979092816 566
327 iso_pu_bacteria 2979095461 2979099795 566
328 iso_pu_bacteria 2979100975 2979104789 566
329 iso_pu_bacteria 2984509177 2984513412 566
330 iso_pu_bacteria 2984518228 2984520220 566
331 iso_pu_bacteria 2984537506 2984539516 566
332 iso_pu_bacteria 2984601300 2984601744 566
333 iso_pu_bacteria 650716007 650738643 566
334 iso_pu_bacteria 8003570095 8003572188 566
335 3300005445 Ga0070708_100016770 Ga0070708_1000167704 567
336 3300005471 Ga0070698_100017892 Ga0070698_1000178923 567
337 3300025294 Ga0209025_1011588 Ga0209025_10115882 567
338 3300025922 Ga0207646_10077422 Ga0207646_100774222 567
339 iso_pu_bacteria 2565956761 2566993700 567
340 iso_pu_bacteria 2904535858 2904536789 567
341 iso_pu_bacteria 2922554459 2922555226 567
342 3300005289 Ga0065704_10091370 Ga0065704_100913701 568
343 3300005327 Ga0070658_10001028 Ga0070658_1000102810 568
344 3300013104 Ga0157370_10000188 Ga0157370_1000018857 568
345 3300025909 Ga0207705_10002001 Ga0207705_100020018 568
346 3300005467 Ga0070706_100031918 Ga0070706_1000319182 569
347 3300005536 Ga0070697_100012535 Ga0070697_1000125353 569
348 3300039447 Ga0436361_0952219 Ga0436361_0952219_464_2296 569
349 3300039447 Ga0436361_1026764 Ga0436361_1026764_1249_3042 569
350 3300048919 Ga0496116_0054417 Ga0496116_0054417_304_2079 569
351 3300048920 Ga0496117_0010219 Ga0496117_0010219_95_1870 569
352 3300048921 Ga0496118_0023917 Ga0496118_0023917_530_2305 569
353 3300048924 Ga0496121_0000001 Ga0496121_0000001_204556_206331 569
354 3300048927 Ga0496124_0080607 Ga0496124_0080607_828_2603 569
355 3300048927 Ga0496124_0093525 Ga0496124_0093525_117_1892 569
356 3300048928 Ga0496125_0000001 Ga0496125_0000001_316439_318214 569
357 3300048929 Ga0496126_0062988 Ga0496126_0062988_112_1887 569
358 3300049576 Ga0501040_0012115 Ga0501040_0012115_63_1874 569
359 3300049578 Ga0501042_0000046 Ga0501042_0000046_39182_40993 569
360 3300005467 Ga0070706_100063955 Ga0070706_1000639552 570
361 3300005548 Ga0070665_100002030 Ga0070665_10000203025 570
362 3300006042 Ga0075368_10008725 Ga0075368_100087252 570
363 3300006051 Ga0075364_10012480 Ga0075364_100124805 570
364 3300006186 Ga0075369_10004361 Ga0075369_100043612 570
365 3300006195 Ga0075366_10017134 Ga0075366_100171343 570
366 3300006353 Ga0075370_10008602 Ga0075370_100086023 570
367 3300006948 Ga0099826_10023258 Ga0099826_100232584 570
368 3300013100 Ga0157373_10014678 Ga0157373_100146782 570
369 3300013102 Ga0157371_10000004 Ga0157371_1000000484 570
370 3300013104 Ga0157370_10005765 Ga0157370_100057652 570
371 3300025910 Ga0207684_10001605 Ga0207684_100016053 570
372 3300027312 Ga0209371_1000009 Ga0209371_1000009911 570
373 3300027312 Ga0209371_1000569 Ga0209371_100056924 570
374 3300027312 Ga0209371_1000597 Ga0209371_10005979 570
375 3300027866 Ga0209813_10000270 Ga0209813_100002705 570
376 3300030500 Ga0268256_1000010 Ga0268256_1000010910 570
377 3300030500 Ga0268256_1003991 Ga0268256_10039912 570
378 3300039447 Ga0436361_0005490 Ga0436361_0005490_3396_5201 570
379 3300039447 Ga0436361_0193530 Ga0436361_0193530_316_2121 570
380 3300039447 Ga0436361_0800433 Ga0436361_0800433_489_2294 570
381 3300046558 Ga0495633_0032718 Ga0495633_0032718_480_2246 570
382 3300046674 Ga0495588_0007069 Ga0495588_0007069_2980_4746 570
383 3300047470 Ga0495681_0009138 Ga0495681_0009138_4154_5920 570
384 3300048907 Ga0496104_0069679 Ga0496104_0069679_1408_3177 570
385 3300048920 Ga0496117_0000002 Ga0496117_0000002_2391377_2393143 570
386 3300048921 Ga0496118_0001167 Ga0496118_0001167_11659_13425 570
387 3300048922 Ga0496119_0010058 Ga0496119_0010058_3642_5411 570
388 3300048923 Ga0496120_0000498 Ga0496120_0000498_49835_51601 570
389 3300048925 Ga0496122_0000001 Ga0496122_0000001_1735385_1737151 570
390 3300048926 Ga0496123_0000001 Ga0496123_0000001_1739116_1740882 570
391 3300048927 Ga0496124_0019835 Ga0496124_0019835_77_1843 570
392 3300048928 Ga0496125_0013635 Ga0496125_0013635_4241_6010 570
393 3300050491 nmdc:mga00v17_8231_c1 nmdc:mga00v17_8231_c1_2679_4445 570
394 3300050492 nmdc:mga0yw44_149_c1 nmdc:mga0yw44_149_c1_18690_20456 570
395 3300050494 nmdc:mga06z11_7077_c1 nmdc:mga06z11_7077_c1_726_2492 570
396 3300050495 nmdc:mga04h51_1880_c1 nmdc:mga04h51_1880_c1_2848_4614 570
397 3300050516 nmdc:mga0sz30_5550_c1 nmdc:mga0sz30_5550_c1_2499_4265 570
398 3300053107 Ga0500560_000916 Ga0500560_000916_1575_3341 570
399 3300053137 Ga0500561_0000146 Ga0500561_0000146_5832_7598 570
400 3300045051 Ga0451576_0116021 Ga0451576_0116021_613_2451 571
401 3300001977 JGI24746J21847_1002018 JGI24746J21847_10020182 573
402 3300005328 Ga0070676_10070176 Ga0070676_100701762 573
403 3300005344 Ga0070661_100016149 Ga0070661_1000161495 573
404 3300005459 Ga0068867_100000691 Ga0068867_1000006917 573
405 3300009148 Ga0105243_10000023 Ga0105243_10000023187 573
406 3300014969 Ga0157376_10008780 Ga0157376_100087804 573
407 3300025920 Ga0207649_10006187 Ga0207649_100061874 573
408 3300025935 Ga0207709_10000197 Ga0207709_100001976 573
409 3300025945 Ga0207679_10000844 Ga0207679_1000084415 573
410 3300026089 Ga0207648_10000325 Ga0207648_1000032536 573
411 3300031548 Ga0307408_100000175 Ga0307408_1000001753 573
412 3300031903 Ga0307407_10000053 Ga0307407_1000005330 573
413 3300031911 Ga0307412_10000025 Ga0307412_1000002544 573
414 3300032002 Ga0307416_100000455 Ga0307416_1000004553 573
415 3300042127 Ga0450890_000060 Ga0450890_000060_8980_10701 573
416 3300042532 Ga0450893_0001528 Ga0450893_0001528_1599_3320 573
417 3300049569 Ga0501032_0090865 Ga0501032_0090865_149_1870 573

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00258

Flavodoxin_1

Flavodoxin

87

218

0.94

PF00667

FAD_binding_1

FAD binding domain

254

452

0.93

PF00175

NAD_binding_1

Oxidoreductase NAD-binding domain

486

593

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ykg-assembly1.cif.gz_A solution structure of the flavodoxin-like domain from the escherichia coli sulfite reductase 0.9753 42 183
4h2d-assembly2.cif.gz_B crystal structure of ndor1 0.9504 41 183
1ddi-assembly1.cif.gz_A crystal structure of sir-fp60 0.9502 202 573
1ykg-assembly1.cif.gz_A solution structure of the flavodoxin-like domain from the escherichia coli sulfite reductase 0.9428 42 183
1ddi-assembly1.cif.gz_A crystal structure of sir-fp60 0.9404 202 573
ID Description Score Start End Superfamily
1ddgA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.9961 419 573 3.40.50.80
1ddgA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.9898 419 573 3.40.50.80
af_Q54B10_477_630_3.40.50.80 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.984 419 573 3.40.50.80
af_Q2FUZ8_472_626_3.40.50.80 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.9802 419 573 3.40.50.80
af_Q54B10_477_630_3.40.50.80 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.9778 419 573 3.40.50.80
ID Description Score Start End GO Terms
AF-A0A3B9AJJ9-F1-model_v4 Sulfite reductase [NADPH] flavoprotein alpha-component 1.002 431 507 GO:0005829
GO:0010181
GO:0016491
GO:0019344
GO:0050660
AF-A0A7S1IWJ0-F1-model_v4 Oxidoreductase FAD/NAD(P)-binding domain-containing protein 0.999 421 573 GO:0005829
GO:0010181
GO:0016491
GO:0050660
AF-A0A6G3V404-F1-model_v4 deleted 0.9986 419 509
AF-A0A837Q2U7-F1-model_v4 deleted 0.9981 427 528
AF-A0A3D4PG38-F1-model_v4 Sulfite reductase subunit alpha 0.998 412 573 GO:0005829
GO:0010181
GO:0016491
GO:0019344
GO:0050660

Feature Viewer

pLDDT pTM Quality
89.54 0.78 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map