F438680

General Info

Members Datasets Scaffolds Average Seq Length
415 322 220 636

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2563366752|2563930531
Length 715
Sequence IRNSGFYLILFLVVVGIVQFVSNGNESADVPRYDQFRQQLNAGNVEEMTLQFDGNAYLVTGKYKVKPANDKVKSNLFSTYMPLTDNAVDELVAVSEKNGTQFSVKRMEGESIWLTLLSSLIPLVLMFVLFFFLFNQSQGGGGKVMNFGKSKARLYNEEKKRATFEDVAGADEEKQELVEVVEFLKDPRKFAAVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGGNEGIIIVAATNRADILDPALLRPGRFDRQITVDRPDVKGREAVLKVHARNKPLTTDVRLDIIAKRTTGFTGADLENLLNEAALLAARRNRKDISMKEVDEAIDRVIVGTEKRSRVISDREKRIVAYHEAGHTIVGYFLEHADEVHKVTIIPRGRAGGYVIMMPKEDRMLATKQELLDRITGLLGGRVSEEIFIGEIGTGAYSDFQQATSIVRSMIMQYGMSEKLGPMQFGSSQGQVFLGRDIGHEQNYSDSIAYEIDQEMQRFTNDCYERCKDLLIKHSREVHLIANTLLEKETLELDQIRELIENGFLAEDAGKTNGGEGSSENGTPIIESVGDVKVHIQGKDEEVDLSKNEIPNEFPSEDQGIDPNEEPNAVPGDIPNEEPGSTPSEPLNDVSGDIPNDLPNRNGGGLPPETK

Samples

Sample ID Description Type Environment
1 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
2 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
3 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
4 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
5 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
6 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
7 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
8 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
9 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
10 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
11 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
12 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
13 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
14 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
15 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
16 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
17 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
18 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
19 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
20 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
21 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
22 2643221729 Bacillus sp. Root11 Isolate Unclassified
23 2643221730 Bacillus sp. Root131 Isolate Unclassified
24 2643221731 Bacillus sp. Root147 Isolate Unclassified
25 2643221732 Bacillus sp. Root239 Isolate Unclassified
26 2643221735 Bacillus sp. Root920 Isolate Unclassified
27 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
28 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
29 2671180694 Paenibacillus sp. A3 Isolate Unclassified
30 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
31 2684622632 Bacillus cereus 905 Isolate Unclassified
32 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
33 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
34 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
35 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
36 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
37 2711768088 Sporolactobacillus terrae DSM 11697 Isolate Rhizosphere
38 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
39 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
40 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
41 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
42 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
43 2738541295 Bacillus sp. OK085 Isolate Unclassified
44 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
45 2738541358 Bacillus sp. OV752 Isolate Unclassified
46 2738543006 Bacillus sp. OK077 Isolate Unclassified
47 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
48 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
49 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
50 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
51 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
52 2802429420 Priestia filamentosa HL2HP6 Isolate Unclassified
53 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
54 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
55 2811994870 Bacillus sp. JB4 Isolate Unclassified
56 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
57 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
58 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
59 2818991441 Niallia circulans 3243 Isolate Rhizosphere
60 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
61 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
62 2818991459 Paenibacillus sp. 597 Isolate Unclassified
63 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
64 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
65 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
66 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
67 2831905167 Ammoniphilus oxalaticus RAOx-1 Isolate Rhizosphere
68 2842682962 Bacillus sp. R-72492 Isolate Unclassified
69 2842882022 Bacillus sp. R-71893 Isolate Unclassified
70 2849139964 Bacillus sp. R-71875 Isolate Unclassified
71 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
72 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
73 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
74 2857472729 Cohnella sp. R-74144 Isolate Unclassified
75 2857581216 Bacillus sp. R-71922 Isolate Unclassified
76 2857586860 Bacillus sp. R-71935 Isolate Unclassified
77 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
78 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
79 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
80 2860837431 Bacillus sp. WR11 Isolate Unclassified
81 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
82 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
83 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
84 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
85 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
86 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
87 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
88 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
89 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
90 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
91 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
92 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
93 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
94 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
95 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
96 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
97 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
98 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
99 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
100 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
101 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
102 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
103 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
104 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
105 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
106 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
107 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
108 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
109 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
110 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
111 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
112 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
113 2919720352 Priestia megaterium 4340 Isolate Unclassified
114 2919726948 Bacillus pumilus 4489 Isolate Unclassified
115 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
116 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
117 2929004312 Priestia megaterium 1104 Isolate Unclassified
118 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
119 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
120 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
121 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
122 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
123 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
124 2938917290 Bacillus sp. CR71 Isolate Unclassified
125 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
126 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
127 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
128 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
129 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
130 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
131 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
132 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
133 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
134 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
135 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
136 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
137 2965761152 Bacillus sp. COPE52 Isolate Unclassified
138 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
139 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
140 2969141011 Bacillus velezensis MH25 Isolate Unclassified
141 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
142 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
143 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
144 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
145 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
146 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
147 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
148 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
149 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
150 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
151 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
152 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
153 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
154 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
155 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
156 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
157 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
158 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
159 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
160 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
161 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
162 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
163 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
164 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
165 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
166 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
167 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
168 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
169 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
170 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
171 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
172 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
173 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
174 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
175 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
176 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
177 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
178 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
179 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
180 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
181 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
182 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
183 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
184 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
185 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
186 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
187 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
188 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
189 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
190 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
191 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
192 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
193 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
194 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
195 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
196 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
197 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
198 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
199 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
200 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
201 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
202 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
203 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
204 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
205 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
206 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
207 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
208 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
209 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
210 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
211 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
212 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
213 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
214 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
215 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
216 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
217 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
218 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
219 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
220 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
221 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
222 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
223 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
224 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
225 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
226 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
227 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
228 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
229 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
230 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
231 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
232 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
233 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
234 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
235 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
236 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
237 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
238 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
239 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
240 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
241 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
242 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
243 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
244 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
245 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
246 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
247 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
248 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
249 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
250 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
251 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
252 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
253 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
254 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
255 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
256 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
257 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
258 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
259 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
260 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
261 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
262 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
263 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
264 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
265 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
266 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
267 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
268 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
269 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
270 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
271 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
272 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
273 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
274 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
275 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
276 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
277 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
278 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
279 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
280 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
281 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
282 3300049133 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
283 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
284 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
285 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
286 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
287 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
288 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
289 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
290 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
291 3300049546 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_B_4_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
292 3300049550 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
293 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
294 3300049552 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
295 3300049556 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
296 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
297 3300059640 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 8R_CD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
298 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
299 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
300 8007371054 Clostridium sp. YIM B02515 Isolate Unclassified
301 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
302 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
303 8022653035 Bacillus sp. Rc4 Isolate Unclassified
304 8022792930 Bacillus sp. Xin Isolate Rhizosphere
305 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
306 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
307 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
308 8023438354 Bacillus sp. BH2 Isolate Unclassified
309 8023444577 Bacillus sp. BH32 Isolate Unclassified
310 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
311 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
312 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
313 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
314 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
315 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
316 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
317 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
318 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
319 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere
320 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere
321 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere
322 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 47.47
Metatranscriptomes 5.3
Isolates 47.23

Biome Distribution

Category Percentage (%)
Aerial Root 0.48
Bulb 0
Endosphere 8.19
Nodule 0.48
Rhizoplane 4.58
Rhizosphere 48.43
Stem 0
Stem Tuber 0
Unclassified 37.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1006341 3300002987 Bacteria 3553
2 JGI25151J46595_10000294 3300003187 Bacteria 55267
3 JGI25151J46595_10011700 3300003187 Bacteria 4022
4 rootH1_10000959 3300003316 Bacteria 49127
5 rootH1_10000959 3300003323 Bacteria 4421
6 rootH2_10150753 3300003320 Bacteria 6589
7 rootL2_10014887 3300003322 Bacteria 23126
8 Ga0006562J51391_1000026 3300003578 Bacteria 55240
9 Ga0006562J51391_1002360 3300003578 Bacteria 8297
10 Ga0006562J51391_1003096 3300003578 Bacteria 2231
11 Ga0055538_1000176 3300003751 Bacteria 41284
12 Ga0055538_1000373 3300003751 Bacteria 18544
13 Ga0055532_1001018 3300003758 Bacteria 8754
14 Ga0055528_1001297 3300003790 Bacteria 15690
15 Ga0055541_1000233 3300003841 Bacteria 20828
16 Ga0070670_100015521 3300005331 Bacteria 6541
17 Ga0070671_100003776 3300005355 Bacteria 11887
18 Ga0070667_100000412 3300005367 Bacteria 45730
19 Ga0070714_100020187 3300005435 Bacteria 5438
20 Ga0070714_100088958 3300005435 Bacteria 2702
21 Ga0105251_10011159 3300009011 Bacteria 5149
22 Ga0105251_10039410 3300009011 Bacteria 2309
23 Ga0105244_10008520 3300009036 Bacteria 6396
24 Ga0105250_10002547 3300009092 Bacteria 9109
25 Ga0105250_10012683 3300009092 Bacteria 3474
26 Ga0105245_10024679 3300009098 Bacteria 5282
27 Ga0105247_10005167 3300009101 Bacteria 8255
28 Ga0105243_10000593 3300009148 Bacteria 36221
29 Ga0105243_10083582 3300009148 Bacteria 2612
30 Ga0105242_10015795 3300009176 Bacteria 5865
31 Ga0105249_10006144 3300009553 Bacteria 10417
32 Ga0105246_10004513 3300011119 Bacteria 8466
33 Ga0105246_10009026 3300011119 Bacteria 6138
34 Ga0157378_10002956 3300013297 Bacteria 15114
35 Ga0157376_10048202 3300014969 Bacteria 3521
36 Ga0213873_10004468 3300021358 Bacteria 2613
37 Ga0213872_10001064 3300021361 Bacteria 18987
38 Ga0213875_10004155 3300021388 Bacteria 8018
39 Ga0213871_10002354 3300021441 Bacteria 3465
40 Ga0209784_100151 3300025224 Bacteria 63336
41 Ga0209784_100342 3300025224 Bacteria 22887
42 Ga0209566_100116 3300025225 Bacteria 107510
43 Ga0209566_100196 3300025225 Bacteria 62620
44 Ga0209566_100205 3300025225 Bacteria 61044
45 Ga0209147_100398 3300025229 Bacteria 29685
46 Ga0209147_100471 3300025229 Bacteria 24664
47 Ga0209147_101731 3300025229 Bacteria 7038
48 Ga0209147_103956 3300025229 Bacteria 2634
49 Ga0209437_100517 3300025233 Bacteria 27191
50 Ga0209673_1000971 3300025273 Bacteria 35495
51 Ga0209130_1003315 3300025284 Bacteria 6954
52 Ga0209130_1006974 3300025284 Bacteria 3569
53 Ga0209675_1009878 3300025291 Bacteria 3319
54 Ga0209676_1001491 3300025292 Bacteria 21530
55 Ga0209025_1000734 3300025294 Bacteria 55490
56 Ga0209025_1000812 3300025294 Bacteria 50111
57 Ga0209025_1000834 3300025294 Bacteria 48958
58 Ga0209025_1001524 3300025294 Bacteria 29647
59 Ga0209025_1001528 3300025294 Bacteria 29602
60 Ga0209025_1004132 3300025294 Bacteria 12884
61 Ga0209025_1004188 3300025294 Bacteria 12728
62 Ga0209025_1006701 3300025294 Bacteria 8842
63 Ga0209025_1011216 3300025294 Bacteria 5941
64 Ga0209025_1022660 3300025294 Bacteria 3319
65 Ga0209025_1028827 3300025294 Bacteria 2706
66 Ga0207696_1001319 3300025711 Bacteria 13715
67 Ga0207696_1001938 3300025711 Bacteria 10525
68 Ga0207696_1002386 3300025711 Bacteria 9265
69 Ga0207696_1008456 3300025711 Bacteria 3932
70 Ga0207655_1001869 3300025728 Bacteria 18138
71 Ga0207655_1003651 3300025728 Bacteria 11358
72 Ga0207655_1013048 3300025728 Bacteria 4796
73 Ga0207713_1001689 3300025735 Bacteria 17076
74 Ga0207713_1010367 3300025735 Bacteria 5160
75 Ga0207710_10008484 3300025900 Bacteria 4332
76 Ga0207663_10027885 3300025916 Bacteria 3298
77 Ga0207681_10054082 3300025923 Bacteria 2728
78 Ga0207686_10006768 3300025934 Bacteria 6173
79 Ga0207712_10019489 3300025961 Bacteria 4431
80 Ga0207658_10065667 3300025986 Bacteria 2726
81 Ga0209371_1003735 3300027312 Bacteria 7133
82 Ga0265338_10000122 3300028800 Bacteria 142416
83 Ga0237817_10033 3300030083 Bacteria 48418
84 Ga0268256_1003431 3300030500 Bacteria 7133
85 Ga0265325_10000192 3300031241 Bacteria 43605
86 Ga0265325_10022870 3300031241 Bacteria 3420
87 Ga0307408_100030556 3300031548 Bacteria 3742
88 Ga0265313_10000659 3300031595 Bacteria 35564
89 Ga0316579_10013569 3300031691 Bacteria 3507
90 Ga0265342_10002261 3300031712 Bacteria 16821
91 Ga0373928_0001937 3300035084 Bacteria 4032
92 Ga0316584_0094557 3300036712 Bacteria 2238
93 Ga0395899_0007559 3300037312 Bacteria 8389
94 Ga0395898_0015513 3300037466 Bacteria 7812
95 Ga0436364_0233051 3300037853 Bacteria 2354
96 Ga0436364_0240084 3300037853 Bacteria 2511
97 Ga0436364_0273345 3300037853 Bacteria 2794207
98 Ga0436364_1204360 3300037853 Bacteria 17456
99 Ga0237819_00117 3300038705 Bacteria 29665
100 Ga0237819_00616 3300038705 Bacteria 11659
101 Ga0400483_039556 3300039062 Bacteria 10415
102 Ga0436360_0309023 3300039438 Bacteria 12015
103 Ga0436361_0298070 3300039447 Bacteria 21162
104 Ga0436361_0735177 3300039447 Bacteria 29126
105 Ga0436363_0296462 3300039450 Bacteria 4573
106 Ga0436362_0051086 3300039453 Bacteria 3514
107 Ga0436362_0157410 3300039453 Bacteria 11708
108 Ga0436362_0846630 3300039453 Bacteria 2476
109 Ga0436362_0919477 3300039453 Bacteria 2996
110 Ga0439439_0000460 3300041406 Bacteria 6929
111 Ga0439449_0000011 3300042007 Bacteria 57369
112 Ga0439462_0000025 3300042015 Bacteria 22569
113 Ga0451577_0000348 3300042876 Bacteria 86030
114 Ga0451577_0032073 3300042876 Bacteria 4734
115 Ga0466969_0010143 3300044656 Bacteria 4995
116 Ga0453683_0006580 3300044673 Bacteria 7963
117 Ga0453683_0011318 3300044673 Bacteria 5883
118 Ga0453683_0051722 3300044673 Bacteria 2573
119 Ga0466963_0010784 3300044694 Bacteria 5548
120 Ga0453684_0001501 3300044712 Bacteria 65687
121 Ga0453684_0002673 3300044712 Bacteria 42475
122 Ga0451576_0017423 3300045051 Bacteria 7899
123 Ga0466967_0002537 3300045976 Bacteria 11431
124 Ga0466967_0005295 3300045976 Bacteria 8906
125 Ga0495603_0017537 3300046455 Bacteria 4333
126 Ga0495584_0016730 3300046491 Bacteria 3739
127 Ga0495585_0021162 3300046492 Bacteria 3736
128 Ga0495609_0031832 3300046538 Bacteria 2397
129 Ga0495649_0023861 3300046694 Bacteria 3415
130 Ga0495660_0024607 3300046810 Bacteria 3429
131 Ga0495683_0005042 3300047323 Bacteria 7400
132 Ga0496100_0012057 3300048903 Bacteria 4943
133 Ga0496101_0002590 3300048904 Bacteria 11115
134 Ga0496102_0001055 3300048905 Bacteria 25506
135 Ga0496103_0004307 3300048906 Bacteria 8647
136 Ga0496104_0001033 3300048907 Bacteria 23825
137 Ga0496104_0012500 3300048907 Bacteria 7635
138 Ga0496105_0000588 3300048908 Bacteria 24206
139 Ga0496106_0002003 3300048909 Bacteria 15326
140 Ga0496107_0000417 3300048910 Bacteria 23129
141 Ga0496108_0000838 3300048911 Bacteria 23921
142 Ga0496109_0000447 3300048912 Bacteria 35408
143 Ga0496110_0000765 3300048913 Bacteria 22271
144 Ga0496110_0015119 3300048913 Bacteria 6415
145 Ga0496111_0002401 3300048914 Bacteria 11300
146 Ga0496111_0018037 3300048914 Bacteria 4882
147 Ga0496112_0005006 3300048915 Bacteria 11370
148 Ga0496113_0015277 3300048916 Bacteria 5271
149 Ga0496113_0066947 3300048916 Bacteria 2722
150 Ga0496116_0000596 3300048919 Bacteria 48028
151 Ga0496116_0000843 3300048919 Bacteria 38538
152 Ga0496116_0002656 3300048919 Bacteria 18512
153 Ga0496116_0003788 3300048919 Bacteria 14778
154 Ga0496116_0006698 3300048919 Bacteria 10383
155 Ga0496116_0011011 3300048919 Bacteria 7526
156 Ga0496116_0035552 3300048919 Bacteria 3498
157 Ga0496116_0083095 3300048919 Bacteria 1978
158 Ga0496117_0000525 3300048920 Bacteria 63133
159 Ga0496117_0002751 3300048920 Bacteria 21553
160 Ga0496117_0015733 3300048920 Bacteria 6426
161 Ga0496118_0020301 3300048921 Bacteria 5895
162 Ga0496118_0076874 3300048921 Bacteria 2370
163 Ga0496119_0000883 3300048922 Bacteria 39252
164 Ga0496119_0001521 3300048922 Bacteria 27725
165 Ga0496119_0005387 3300048922 Bacteria 12296
166 Ga0496119_0012572 3300048922 Bacteria 6860
167 Ga0496119_0015437 3300048922 Bacteria 5880
168 Ga0496119_0037536 3300048922 Bacteria 3145
169 Ga0496120_0000003 3300048923 Bacteria 538703
170 Ga0496120_0000846 3300048923 Bacteria 43443
171 Ga0496120_0001525 3300048923 Bacteria 27277
172 Ga0496120_0059200 3300048923 Bacteria 2147
173 Ga0496120_0061126 3300048923 Bacteria 2104
174 Ga0496121_0095686 3300048924 Bacteria 2307
175 Ga0496122_0000006 3300048925 Bacteria 625811
176 Ga0496122_0000128 3300048925 Bacteria 177688
177 Ga0496122_0000400 3300048925 Bacteria 92252
178 Ga0496122_0001621 3300048925 Bacteria 35157
179 Ga0496122_0026387 3300048925 Bacteria 5009
180 Ga0496122_0079294 3300048925 Bacteria 2295
181 Ga0496123_0000182 3300048926 Bacteria 126748
182 Ga0496123_0005836 3300048926 Bacteria 12207
183 Ga0496123_0010505 3300048926 Bacteria 8168
184 Ga0496123_0011566 3300048926 Bacteria 7634
185 Ga0496124_0000211 3300048927 Bacteria 113824
186 Ga0496124_0000542 3300048927 Bacteria 64211
187 Ga0496124_0037926 3300048927 Bacteria 4187
188 Ga0496124_0038114 3300048927 Bacteria 4175
189 Ga0496124_0092618 3300048927 Bacteria 2462
190 Ga0496125_0000027 3300048928 Bacteria 397211
191 Ga0496125_0000920 3300048928 Bacteria 46265
192 Ga0496125_0002340 3300048928 Bacteria 24849
193 Ga0496125_0004182 3300048928 Bacteria 16827
194 Ga0496125_0055892 3300048928 Bacteria 3211
195 Ga0496126_0000016 3300048929 Bacteria 625843
196 Ga0496126_0000182 3300048929 Bacteria 140941
197 Ga0496126_0001205 3300048929 Bacteria 42144
198 Ga0496126_0001917 3300048929 Bacteria 29832
199 Ga0496126_0002363 3300048929 Bacteria 25742
200 Ga0496126_0003262 3300048929 Bacteria 20722
201 Ga0501306_001126 3300049127 Bacteria 2404
202 Ga0501344_00273 3300049133 Bacteria 1985
203 Ga0501305_000164 3300049161 Bacteria 4485
204 Ga0501305_001143 3300049161 Bacteria 2501
205 Ga0501305_001342 3300049161 Bacteria 2381
206 Ga0501311_000083 3300049527 Bacteria 4382
207 Ga0501312_002381 3300049528 Bacteria 2026
208 Ga0501315_000472 3300049531 Bacteria 2800
209 Ga0501316_000823 3300049532 Bacteria 2383
210 Ga0501317_000182 3300049533 Bacteria 3705
211 Ga0501318_000447 3300049534 Bacteria 2605
212 Ga0501321_001028 3300049537 Bacteria 2087
213 Ga0501330_000395 3300049546 Bacteria 1798
214 Ga0501334_00234 3300049550 Bacteria 2266
215 Ga0501334_00346 3300049550 Bacteria 2035
216 Ga0501335_000470 3300049551 Bacteria 2585
217 Ga0501336_000412 3300049552 Bacteria 2094
218 Ga0501340_000226 3300049556 Bacteria 2145
219 Ga0495619_0048448 3300053085 Bacteria 2800
220 Ga0587067_000442 3300059640 Bacteria 3588

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039453 Ga0436362_0919477 Ga0436362_0919477_1338_2972 494
2 3300049546 Ga0501330_000395 Ga0501330_000395_13_1734 501
3 3300048923 Ga0496120_0061126 Ga0496120_0061126_303_2069 522
4 3300048919 Ga0496116_0003788 Ga0496116_0003788_12932_14755 556
5 3300048919 Ga0496116_0083095 Ga0496116_0083095_132_1955 556
6 3300048923 Ga0496120_0059200 Ga0496120_0059200_64_1887 556
7 3300048925 Ga0496122_0000006 Ga0496122_0000006_378281_380101 556
8 3300048926 Ga0496123_0005836 Ga0496123_0005836_9533_11353 556
9 3300048929 Ga0496126_0000016 Ga0496126_0000016_378281_380101 556
10 3300048920 Ga0496117_0000525 Ga0496117_0000525_49720_51543 558
11 3300048921 Ga0496118_0076874 Ga0496118_0076874_111_1934 558
12 3300048922 Ga0496119_0000883 Ga0496119_0000883_48_1871 558
13 3300048922 Ga0496119_0015437 Ga0496119_0015437_202_2025 558
14 3300048922 Ga0496119_0037536 Ga0496119_0037536_48_1871 558
15 3300048923 Ga0496120_0000003 Ga0496120_0000003_149243_151066 558
16 3300048923 Ga0496120_0000846 Ga0496120_0000846_41006_42829 558
17 3300048924 Ga0496121_0095686 Ga0496121_0095686_10_1761 558
18 3300048925 Ga0496122_0000400 Ga0496122_0000400_60765_62588 558
19 3300048926 Ga0496123_0000182 Ga0496123_0000182_81492_83315 558
20 3300048927 Ga0496124_0037926 Ga0496124_0037926_1292_3115 558
21 3300048928 Ga0496125_0000027 Ga0496125_0000027_121582_123405 558
22 3300048929 Ga0496126_0000182 Ga0496126_0000182_25016_26839 558
23 3300044673 Ga0453683_0011318 Ga0453683_0011318_1949_3757 562
24 3300044673 Ga0453683_0051722 Ga0453683_0051722_433_2241 562
25 3300059640 Ga0587067_000442 Ga0587067_000442_15_1967 563
26 3300025916 Ga0207663_10027885 Ga0207663_100278852 565
27 3300039062 Ga0400483_039556 Ga0400483_039556_302_2098 566
28 3300021361 Ga0213872_10001064 Ga0213872_1000106410 567
29 3300039447 Ga0436361_0735177 Ga0436361_0735177_9713_11629 567
30 3300028800 Ga0265338_10000122 Ga0265338_1000012294 568
31 3300031241 Ga0265325_10000192 Ga0265325_1000019227 568
32 3300031595 Ga0265313_10000659 Ga0265313_1000065927 568
33 3300031712 Ga0265342_10002261 Ga0265342_1000226115 568
34 3300037853 Ga0436364_0233051 Ga0436364_0233051_14_1882 568
35 3300045051 Ga0451576_0017423 Ga0451576_0017423_43_1884 568
36 3300044712 Ga0453684_0001501 Ga0453684_0001501_8166_10007 570
37 iso_pu_bacteria 8007371054 8007375700 571
38 3300042876 Ga0451577_0032073 Ga0451577_0032073_2306_4165 573
39 3300035084 Ga0373928_0001937 Ga0373928_0001937_831_2696 574
40 3300037312 Ga0395899_0007559 Ga0395899_0007559_2985_4850 574
41 3300037466 Ga0395898_0015513 Ga0395898_0015513_3540_5405 574
42 3300042876 Ga0451577_0000348 Ga0451577_0000348_9419_11281 574
43 3300044673 Ga0453683_0006580 Ga0453683_0006580_3454_5319 574
44 3300048919 Ga0496116_0000843 Ga0496116_0000843_29266_31143 575
45 3300048925 Ga0496122_0000128 Ga0496122_0000128_61693_63561 575
46 3300048926 Ga0496123_0011566 Ga0496123_0011566_303_2171 575
47 3300048928 Ga0496125_0055892 Ga0496125_0055892_352_2220 575
48 3300048929 Ga0496126_0002363 Ga0496126_0002363_18389_20257 575
49 3300005435 Ga0070714_100088958 Ga0070714_1000889582 576
50 3300037853 Ga0436364_0273345 Ga0436364_0273345_828849_830768 578
51 3300048907 Ga0496104_0012500 Ga0496104_0012500_2489_4444 578
52 3300031241 Ga0265325_10022870 Ga0265325_100228702 580
53 3300039450 Ga0436363_0296462 Ga0436363_0296462_543_2471 580
54 3300048928 Ga0496125_0002340 Ga0496125_0002340_16203_18227 580
55 3300021388 Ga0213875_10004155 Ga0213875_100041556 581
56 3300039453 Ga0436362_0051086 Ga0436362_0051086_1247_3136 581
57 3300049127 Ga0501306_001126 Ga0501306_001126_349_2376 581
58 3300049161 Ga0501305_001342 Ga0501305_001342_333_2360 581
59 3300049532 Ga0501316_000823 Ga0501316_000823_333_2360 581
60 3300031691 Ga0316579_10013569 Ga0316579_100135692 583
61 3300036712 Ga0316584_0094557 Ga0316584_0094557_100_2055 583
62 3300048919 Ga0496116_0002656 Ga0496116_0002656_3088_5112 584
63 3300048927 Ga0496124_0000211 Ga0496124_0000211_27534_29558 584
64 3300025225 Ga0209566_100205 Ga0209566_10020549 585
65 3300021441 Ga0213871_10002354 Ga0213871_100023543 587
66 3300037853 Ga0436364_1204360 Ga0436364_1204360_8385_10307 588
67 3300053085 Ga0495619_0048448 Ga0495619_0048448_818_2707 588
68 iso_pu_bacteria 2540341094 2540605162 588
69 3300039447 Ga0436361_0298070 Ga0436361_0298070_11758_13677 589
70 3300045976 Ga0466967_0005295 Ga0466967_0005295_3592_5505 589
71 3300021358 Ga0213873_10004468 Ga0213873_100044682 590
72 3300039453 Ga0436362_0157410 Ga0436362_0157410_7111_9030 590
73 3300039453 Ga0436362_0846630 Ga0436362_0846630_335_2254 590
74 3300005435 Ga0070714_100020187 Ga0070714_1000201873 591
75 3300039438 Ga0436360_0309023 Ga0436360_0309023_8228_10144 591
76 3300044694 Ga0466963_0010784 Ga0466963_0010784_1942_3855 591
77 3300048925 Ga0496122_0001621 Ga0496122_0001621_7528_9531 591
78 iso_pu_bacteria 8055632911 8055634077 591
79 3300005367 Ga0070667_100000412 Ga0070667_1000004121 592
80 3300025986 Ga0207658_10065667 Ga0207658_100656672 592
81 3300044712 Ga0453684_0002673 Ga0453684_0002673_17239_19158 592
82 iso_pu_bacteria 2980182181 2980185334 592
83 iso_pu_bacteria 8054795415 8054801372 593
84 3300025291 Ga0209675_1009878 Ga0209675_10098782 594
85 3300037853 Ga0436364_0240084 Ga0436364_0240084_288_2207 594
86 3300044656 Ga0466969_0010143 Ga0466969_0010143_1826_3781 594
87 3300048919 Ga0496116_0035552 Ga0496116_0035552_1202_3142 594
88 iso_pu_bacteria 2585428059 2587743940 594
89 iso_pu_bacteria 2643221676 2644423990 594
90 iso_pu_bacteria 2818991459 2819676009 594
91 iso_pu_bacteria 2831905167 2831907839 594
92 iso_pu_bacteria 2857453340 2857460181 594
93 iso_pu_bacteria 2904755435 2904758198 594
94 iso_pu_bacteria 2919425241 2919432295 594
95 iso_pu_bacteria 2971410472 2971412869 594
96 iso_pu_bacteria 8056533031 8056534093 594
97 3300031548 Ga0307408_100030556 Ga0307408_1000305563 595
98 3300049133 Ga0501344_00273 Ga0501344_00273_35_1915 595
99 3300025294 Ga0209025_1011216 Ga0209025_10112164 596
100 3300048913 Ga0496110_0000765 Ga0496110_0000765_7931_9991 596
101 3300048914 Ga0496111_0002401 Ga0496111_0002401_6437_8497 596
102 3300049550 Ga0501334_00234 Ga0501334_00234_316_2196 596
103 3300049161 Ga0501305_001143 Ga0501305_001143_424_2484 597
104 iso_pu_bacteria 2888578766 2888578991 597
105 iso_pu_bacteria 2929206907 2929207147 597
106 iso_pu_bacteria 8057977335 8057979806 597
107 iso_pu_bacteria 2510917027 2511176049 598
108 iso_pu_bacteria 2857472729 2857477555 598
109 iso_pu_bacteria 2915606848 2915609186 598
110 iso_pu_bacteria 2925326138 2925332231 598
111 iso_pu_bacteria 2593339198 2595320818 599
112 iso_pu_bacteria 2671180694 2673822943 599
113 iso_pu_bacteria 2857465823 2857472524 599
114 iso_pu_bacteria 2857591370 2857597521 599
115 iso_pu_bacteria 2865002811 2865008224 599
116 iso_pu_bacteria 2889049205 2889052466 599
117 3300025225 Ga0209566_100116 Ga0209566_10011624 600
118 3300049550 Ga0501334_00346 Ga0501334_00346_104_1990 600
119 iso_pu_bacteria 2744054657 2745169554 600
120 iso_pu_bacteria 2816332336 2817616366 600
121 iso_pu_bacteria 2864997549 2865002668 600
122 iso_pu_bacteria 2889295896 2889299010 600
123 iso_pu_bacteria 2898907183 2898908147 600
124 iso_pu_bacteria 2916971899 2916972012 600
125 iso_pu_bacteria 2980125574 2980129810 600
126 iso_pu_bacteria 2981284811 2981289609 600
127 iso_pu_bacteria 2981289755 2981294554 600
128 iso_pu_bacteria 2981980479 2981985178 600
129 iso_pu_bacteria 2981985349 2981990112 600
130 3300009036 Ga0105244_10008520 Ga0105244_100085204 602
131 iso_pu_bacteria 2791355222 2793182028 602
132 iso_pu_bacteria 2904113452 2904119478 602
133 iso_pu_bacteria 8002317523 8002323382 602
134 iso_pu_bacteria 8046991243 8046992212 602
135 3300003751 Ga0055538_1000176 Ga0055538_10001768 603
136 3300025224 Ga0209784_100151 Ga0209784_10015118 603
137 3300025224 Ga0209784_100342 Ga0209784_10034216 603
138 3300025294 Ga0209025_1006701 Ga0209025_10067012 603
139 3300048919 Ga0496116_0011011 Ga0496116_0011011_3973_5970 603
140 3300048927 Ga0496124_0092618 Ga0496124_0092618_36_2033 603
141 iso_pu_bacteria 2990275345 2990275761 603
142 iso_pu_bacteria 2512564013 2512641570 604
143 iso_pu_bacteria 2721755693 2723601405 604
144 iso_pu_bacteria 2728369359 2730137528 604
145 iso_pu_bacteria 2751185905 2753813015 604
146 iso_pu_bacteria 2802428803 2802440535 604
147 iso_pu_bacteria 2889276214 2889277500 604
148 iso_pu_bacteria 2904595352 2904601047 604
149 iso_pu_bacteria 2915597211 2915598577 604
150 iso_pu_bacteria 2929183550 2929183723 604
151 iso_pu_bacteria 2939702853 2939706864 604
152 iso_pu_bacteria 2977254563 2977254762 604
153 iso_pu_bacteria 2996706504 2996711009 604
154 iso_pu_bacteria 648028048 648167990 604
155 iso_pu_bacteria 2818991441 2819571281 605
156 iso_pu_bacteria 2936361878 2936363629 605
157 iso_pu_bacteria 2984527788 2984532004 605
158 iso_pu_bacteria 2984532647 2984533258 605
159 3300003187 JGI25151J46595_10000294 JGI25151J46595_1000029414 606
160 3300003841 Ga0055541_1000233 Ga0055541_100023314 606
161 3300025225 Ga0209566_100196 Ga0209566_10019651 606
162 3300025292 Ga0209676_1001491 Ga0209676_10014918 606
163 3300025294 Ga0209025_1000734 Ga0209025_100073449 606
164 3300025294 Ga0209025_1004132 Ga0209025_10041327 606
165 3300041406 Ga0439439_0000460 Ga0439439_0000460_3268_5274 606
166 3300042007 Ga0439449_0000011 Ga0439449_0000011_20620_22626 606
167 3300042015 Ga0439462_0000025 Ga0439462_0000025_9702_11708 606
168 iso_pu_bacteria 2524023129 2524191662 606
169 iso_pu_bacteria 2548877040 2550904055 606
170 iso_pu_bacteria 2554235469 2556066087 606
171 iso_pu_bacteria 2571042143 2571530463 606
172 iso_pu_bacteria 2571042588 2573041658 606
173 iso_pu_bacteria 2576861424 2578334568 606
174 iso_pu_bacteria 2579778775 2580935160 606
175 iso_pu_bacteria 2600255286 2601636879 606
176 iso_pu_bacteria 2619619294 2621272595 606
177 iso_pu_bacteria 2643221735 2644741708 606
178 iso_pu_bacteria 2728368933 2728529775 606
179 iso_pu_bacteria 2738541299 2738840650 606
180 iso_pu_bacteria 2818991468 2819726154 606
181 iso_pu_bacteria 2881636855 2881639556 606
182 iso_pu_bacteria 2908665501 2908669250 606
183 iso_pu_bacteria 2919093281 2919097009 606
184 iso_pu_bacteria 2919414237 2919419112 606
185 iso_pu_bacteria 2938649242 2938653483 606
186 iso_pu_bacteria 2954773129 2954776145 606
187 iso_pu_bacteria 2968558590 2968562251 606
188 iso_pu_bacteria 2971403814 2971406939 606
189 iso_pu_bacteria 2971511577 2971513876 606
190 iso_pu_bacteria 2980176882 2980179597 606
191 iso_pu_bacteria 2988225383 2988230095 606
192 iso_pu_bacteria 2996632988 2996637422 606
193 iso_pu_bacteria 3001892409 3001894090 606
194 iso_pu_bacteria 8054465665 8054468553 606
195 3300003578 Ga0006562J51391_1000026 Ga0006562J51391_100002649 607
196 3300003578 Ga0006562J51391_1003096 Ga0006562J51391_10030961 607
197 3300003758 Ga0055532_1001018 Ga0055532_10010187 607
198 3300025229 Ga0209147_100398 Ga0209147_10039817 607
199 3300048920 Ga0496117_0002751 Ga0496117_0002751_3546_5585 607
200 3300048921 Ga0496118_0020301 Ga0496118_0020301_3187_5226 607
201 3300048922 Ga0496119_0012572 Ga0496119_0012572_2497_4536 607
202 3300048925 Ga0496122_0026387 Ga0496122_0026387_1985_4024 607
203 3300048926 Ga0496123_0010505 Ga0496123_0010505_5109_7148 607
204 3300048928 Ga0496125_0000920 Ga0496125_0000920_12344_14383 607
205 iso_pu_bacteria 2563366752 2563930531 607
206 iso_pu_bacteria 2643221543 2643738722 607
207 iso_pu_bacteria 2643221731 2644718615 607
208 iso_pu_bacteria 2643221732 2644723464 607
209 iso_pu_bacteria 2671180330 2672333526 607
210 iso_pu_bacteria 2684623153 2686995260 607
211 iso_pu_bacteria 2687453109 2687496509 607
212 iso_pu_bacteria 2711768088 2712198691 607
213 iso_pu_bacteria 2788500588 2791211412 607
214 iso_pu_bacteria 2811994870 2812314397 607
215 iso_pu_bacteria 2816332186 2816866470 607
216 iso_pu_bacteria 2818991451 2819629531 607
217 iso_pu_bacteria 2818991465 2819712083 607
218 iso_pu_bacteria 2821111986 2821118230 607
219 iso_pu_bacteria 2823526263 2823526350 607
220 iso_pu_bacteria 2842682962 2842688431 607
221 iso_pu_bacteria 2842882022 2842888064 607
222 iso_pu_bacteria 2849139964 2849145080 607
223 iso_pu_bacteria 2857581216 2857586572 607
224 iso_pu_bacteria 2864733723 2864738784 607
225 iso_pu_bacteria 2885526491 2885529810 607
226 iso_pu_bacteria 2889042446 2889042508 607
227 iso_pu_bacteria 2904162308 2904167351 607
228 iso_pu_bacteria 2904490793 2904496889 607
229 iso_pu_bacteria 2904524088 2904530313 607
230 iso_pu_bacteria 2904606771 2904611459 607
231 iso_pu_bacteria 2907202186 2907205030 607
232 iso_pu_bacteria 2919143609 2919149552 607
233 iso_pu_bacteria 2919160200 2919166155 607
234 iso_pu_bacteria 2919517244 2919523158 607
235 iso_pu_bacteria 2919720352 2919726272 607
236 iso_pu_bacteria 2919726948 2919730680 607
237 iso_pu_bacteria 2928093941 2928099816 607
238 iso_pu_bacteria 2929004312 2929010015 607
239 iso_pu_bacteria 2931384279 2931385934 607
240 iso_pu_bacteria 2939679117 2939685062 607
241 iso_pu_bacteria 2945991243 2945995463 607
242 iso_pu_bacteria 2946053406 2946058169 607
243 iso_pu_bacteria 2960319331 2960323573 607
244 iso_pu_bacteria 2960375949 2960379270 607
245 iso_pu_bacteria 3006969106 3006970101 607
246 iso_pu_bacteria 3006984091 3006988440 607
247 iso_pu_bacteria 8022893055 8022896369 607
248 iso_pu_bacteria 8022914991 8022917997 607
249 iso_pu_bacteria 8055531788 8055531889 607
250 iso_pu_bacteria 8057733483 8057735808 607
251 iso_pu_bacteria 2738541295 2738817551 608
252 iso_pu_bacteria 2852673933 2852677322 608
253 iso_pu_bacteria 2939593269 2939596737 608
254 iso_pu_bacteria 3006973921 3006978407 608
255 3300003751 Ga0055538_1000373 Ga0055538_10003739 609
256 3300025294 Ga0209025_1000812 Ga0209025_100081227 609
257 iso_pu_bacteria 2808606364 2808871114 609
258 iso_pu_bacteria 2808606399 2809057118 609
259 iso_pu_bacteria 2860837431 2860837514 609
260 iso_pu_bacteria 2962290636 2962290724 609
261 iso_pu_bacteria 2964375228 2964376628 609
262 iso_pu_bacteria 2969136845 2969136931 609
263 iso_pu_bacteria 2969765954 2969766341 609
264 iso_pu_bacteria 2969770375 2969770425 609
265 iso_pu_bacteria 2980492589 2980492675 609
266 iso_pu_bacteria 3001267043 3001272064 609
267 iso_pu_bacteria 3001272096 3001275888 609
268 iso_pu_bacteria 3006988479 3006993262 609
269 iso_pu_bacteria 8022653035 8022656335 609
270 iso_pu_bacteria 8054280661 8054282948 609
271 3300009011 Ga0105251_10011159 Ga0105251_100111593 610
272 3300025229 Ga0209147_101731 Ga0209147_1017313 610
273 3300025233 Ga0209437_100517 Ga0209437_10051718 610
274 3300025728 Ga0207655_1013048 Ga0207655_10130483 610
275 3300025735 Ga0207713_1010367 Ga0207713_10103673 610
276 3300046538 Ga0495609_0031832 Ga0495609_0031832_176_2143 610
277 3300046810 Ga0495660_0024607 Ga0495660_0024607_1376_3334 610
278 3300048919 Ga0496116_0000596 Ga0496116_0000596_544_2589 610
279 3300048925 Ga0496122_0079294 Ga0496122_0079294_135_2177 610
280 3300048927 Ga0496124_0038114 Ga0496124_0038114_1329_3371 610
281 iso_pu_bacteria 2511231119 2511697938 610
282 iso_pu_bacteria 2545555800 2545559809 610
283 iso_pu_bacteria 2576861599 2578930766 610
284 iso_pu_bacteria 2630968484 2631985878 610
285 iso_pu_bacteria 2648501850 2651529605 610
286 iso_pu_bacteria 2671180844 2674421208 610
287 iso_pu_bacteria 2695420354 2695629853 610
288 iso_pu_bacteria 2716884898 2717914461 610
289 iso_pu_bacteria 2816332295 2817478125 610
290 iso_pu_bacteria 2857604169 2857609026 610
291 iso_pu_bacteria 2857609550 2857613553 610
292 iso_pu_bacteria 2877768649 2877768733 610
293 iso_pu_bacteria 2880169592 2880169676 610
294 iso_pu_bacteria 2904560550 2904564504 610
295 iso_pu_bacteria 2956897341 2956901124 610
296 iso_pu_bacteria 2969141011 2969141097 610
297 iso_pu_bacteria 2971893375 2971893461 610
298 iso_pu_bacteria 3006858327 3006858449 610
299 iso_pu_bacteria 8022630665 8022631691 610
300 iso_pu_bacteria 8051952484 8051956603 610
301 iso_pu_bacteria 8052174270 8052175080 610
302 3300003316 rootH1_10000959 rootH1_1000095910 611
303 3300003320 rootH2_10150753 rootH2_101507534 611
304 3300003322 rootL2_10014887 rootL2_1001488715 611
305 3300003578 Ga0006562J51391_1002360 Ga0006562J51391_10023606 611
306 3300003790 Ga0055528_1001297 Ga0055528_100129715 611
307 3300005331 Ga0070670_100015521 Ga0070670_1000155213 611
308 3300005355 Ga0070671_100003776 Ga0070671_1000037765 611
309 3300009098 Ga0105245_10024679 Ga0105245_100246793 611
310 3300009101 Ga0105247_10005167 Ga0105247_100051672 611
311 3300009148 Ga0105243_10000593 Ga0105243_1000059329 611
312 3300009176 Ga0105242_10015795 Ga0105242_100157953 611
313 3300011119 Ga0105246_10009026 Ga0105246_100090263 611
314 3300013297 Ga0157378_10002956 Ga0157378_100029566 611
315 3300014969 Ga0157376_10048202 Ga0157376_100482021 611
316 3300025229 Ga0209147_100471 Ga0209147_1004713 611
317 3300025273 Ga0209673_1000971 Ga0209673_10009715 611
318 3300025711 Ga0207696_1001938 Ga0207696_10019383 611
319 3300025728 Ga0207655_1003651 Ga0207655_10036519 611
320 3300025735 Ga0207713_1001689 Ga0207713_10016896 611
321 3300025900 Ga0207710_10008484 Ga0207710_100084843 611
322 3300025934 Ga0207686_10006768 Ga0207686_100067684 611
323 3300046455 Ga0495603_0017537 Ga0495603_0017537_69_1979 611
324 3300046491 Ga0495584_0016730 Ga0495584_0016730_1562_3472 611
325 3300046492 Ga0495585_0021162 Ga0495585_0021162_1344_3254 611
326 3300047323 Ga0495683_0005042 Ga0495683_0005042_1418_3328 611
327 3300048903 Ga0496100_0012057 Ga0496100_0012057_1703_3613 611
328 3300048904 Ga0496101_0002590 Ga0496101_0002590_7890_9800 611
329 3300048905 Ga0496102_0001055 Ga0496102_0001055_2814_4724 611
330 3300048906 Ga0496103_0004307 Ga0496103_0004307_5035_6945 611
331 3300048907 Ga0496104_0001033 Ga0496104_0001033_8834_10744 611
332 3300048908 Ga0496105_0000588 Ga0496105_0000588_1386_3296 611
333 3300048909 Ga0496106_0002003 Ga0496106_0002003_5527_7437 611
334 3300048910 Ga0496107_0000417 Ga0496107_0000417_5806_7716 611
335 3300048911 Ga0496108_0000838 Ga0496108_0000838_13082_14992 611
336 3300048912 Ga0496109_0000447 Ga0496109_0000447_32154_34064 611
337 3300048913 Ga0496110_0015119 Ga0496110_0015119_1848_3758 611
338 3300048914 Ga0496111_0018037 Ga0496111_0018037_1270_3180 611
339 3300048915 Ga0496112_0005006 Ga0496112_0005006_8950_10860 611
340 3300048916 Ga0496113_0015277 Ga0496113_0015277_1976_3886 611
341 3300048916 Ga0496113_0066947 Ga0496113_0066947_567_2516 611
342 3300048919 Ga0496116_0006698 Ga0496116_0006698_6928_8838 611
343 3300048920 Ga0496117_0015733 Ga0496117_0015733_4265_6175 611
344 3300048922 Ga0496119_0001521 Ga0496119_0001521_14524_16620 611
345 3300048922 Ga0496119_0005387 Ga0496119_0005387_8941_10851 611
346 3300048923 Ga0496120_0001525 Ga0496120_0001525_14489_16585 611
347 3300048927 Ga0496124_0000542 Ga0496124_0000542_53_2149 611
348 3300048928 Ga0496125_0004182 Ga0496125_0004182_5625_7535 611
349 3300048929 Ga0496126_0001205 Ga0496126_0001205_14538_16586 611
350 3300048929 Ga0496126_0001917 Ga0496126_0001917_25783_27879 611
351 3300048929 Ga0496126_0003262 Ga0496126_0003262_8074_9984 611
352 3300049161 Ga0501305_000164 Ga0501305_000164_2565_4475 611
353 3300049527 Ga0501311_000083 Ga0501311_000083_2455_4365 611
354 iso_pu_bacteria 2643221729 2644705852 611
355 iso_pu_bacteria 2643221730 2644713302 611
356 iso_pu_bacteria 2684622632 2685153510 611
357 iso_pu_bacteria 2695420987 2698319682 611
358 iso_pu_bacteria 2703719227 2705991959 611
359 iso_pu_bacteria 2718218445 2721503384 611
360 iso_pu_bacteria 2738541358 2739160268 611
361 iso_pu_bacteria 2738543006 2739212787 611
362 iso_pu_bacteria 2802429420 2805348275 611
363 iso_pu_bacteria 2818991443 2819585087 611
364 iso_pu_bacteria 2857586860 2857591252 611
365 iso_pu_bacteria 2929233124 2929233198 611
366 iso_pu_bacteria 2938917290 2938917376 611
367 iso_pu_bacteria 2947426588 2947426664 611
368 iso_pu_bacteria 2965761152 2965761187 611
369 iso_pu_bacteria 3006826541 3006827205 611
370 iso_pu_bacteria 3006978542 3006980081 611
371 iso_pu_bacteria 8022621104 8022621163 611
372 iso_pu_bacteria 8022792930 8022796001 611
373 iso_pu_bacteria 8022948649 8022952082 611
374 iso_pu_bacteria 8023438354 8023440701 611
375 iso_pu_bacteria 8023444577 8023447696 611
376 iso_pu_bacteria 8057582654 8057582731 611
377 iso_pu_bacteria 8057632132 8057632213 611
378 3300049528 Ga0501312_002381 Ga0501312_002381_10_1956 612
379 3300049531 Ga0501315_000472 Ga0501315_000472_56_2002 612
380 3300049534 Ga0501318_000447 Ga0501318_000447_71_2017 612
381 3300049537 Ga0501321_001028 Ga0501321_001028_63_2009 612
382 3300049551 Ga0501335_000470 Ga0501335_000470_52_1998 612
383 3300049552 Ga0501336_000412 Ga0501336_000412_75_2024 612
384 3300049556 Ga0501340_000226 Ga0501340_000226_129_2075 612
385 3300046694 Ga0495649_0023861 Ga0495649_0023861_101_2089 613
386 3300049533 Ga0501317_000182 Ga0501317_000182_399_2324 613
387 3300002987 JGI25159J45721_1006341 JGI25159J45721_10063411 615
388 3300003187 JGI25151J46595_10011700 JGI25151J46595_100117004 615
389 3300009011 Ga0105251_10039410 Ga0105251_100394101 615
390 3300009092 Ga0105250_10002547 Ga0105250_100025476 615
391 3300009092 Ga0105250_10012683 Ga0105250_100126831 615
392 3300009148 Ga0105243_10083582 Ga0105243_100835821 615
393 3300009553 Ga0105249_10006144 Ga0105249_100061444 615
394 3300011119 Ga0105246_10004513 Ga0105246_100045136 615
395 3300025229 Ga0209147_103956 Ga0209147_1039561 615
396 3300025284 Ga0209130_1003315 Ga0209130_10033153 615
397 3300025284 Ga0209130_1006974 Ga0209130_10069741 615
398 3300025294 Ga0209025_1000834 Ga0209025_100083414 615
399 3300025294 Ga0209025_1001524 Ga0209025_100152418 615
400 3300025294 Ga0209025_1001528 Ga0209025_100152813 615
401 3300025294 Ga0209025_1004188 Ga0209025_100418813 615
402 3300025294 Ga0209025_1022660 Ga0209025_10226601 615
403 3300025294 Ga0209025_1028827 Ga0209025_10288272 615
404 3300025711 Ga0207696_1001319 Ga0207696_10013193 615
405 3300025711 Ga0207696_1002386 Ga0207696_10023865 615
406 3300025711 Ga0207696_1008456 Ga0207696_10084563 615
407 3300025728 Ga0207655_1001869 Ga0207655_10018696 615
408 3300025923 Ga0207681_10054082 Ga0207681_100540821 615
409 3300025961 Ga0207712_10019489 Ga0207712_100194893 615
410 3300027312 Ga0209371_1003735 Ga0209371_10037352 615
411 3300030083 Ga0237817_10033 Ga0237817_1003341 615
412 3300030500 Ga0268256_1003431 Ga0268256_10034312 615
413 3300038705 Ga0237819_00117 Ga0237819_00117_16770_18671 615
414 3300038705 Ga0237819_00616 Ga0237819_00616_4567_6468 615
415 3300045976 Ga0466967_0002537 Ga0466967_0002537_4446_6347 615

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01434

Peptidase_M41

Peptidase family M41

414

603

0.99

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

201

334

0.97

PF17862

AAA_lid_3

AAA+ lid domain

356

400

0.96

PF06480

FtsH_ext

FtsH Extracellular

4

107

0.93

PF07728

AAA_5

AAA domain (dynein-related subfamily)

200

323

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
4a3v-assembly2.cif.gz_D yeast regulatory particle proteasome assembly chaperone hsm3 in complex with rpt1 c-terminal fragment 0.9632 314 385
3vlf-assembly2.cif.gz_D crystal structure of yeast proteasome interacting protein 0.9551 318 386
4jpo-assembly3.cif.gz_C 5a resolution structure of proteasome assembly chaperone hsm3 in complex with a c-terminal fragment of rpt1 0.95 318 387
3kw6-assembly1.cif.gz_A crystal structure of a domain of 26s proteasome regulatory subunit 8 from homo sapiens. northeast structural genomics consortium target id hr3102a 0.9416 314 385
1iy2-assembly1.cif.gz_A crystal structure of the ftsh atpase domain from thermus thermophilus 0.9409 140 381
ID Description Score Start End Superfamily
4ww0C02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9998 314 383 1.10.8.60
4ww0B02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9993 315 383 1.10.8.60
6gcnA02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.997 314 385 1.10.8.60
af_A0A1D6FLN2_395_468_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9952 314 385 1.10.8.60
af_A4ICH8_266_341_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.989 314 387 1.10.8.60
ID Description Score Start End GO Terms
AF-A0A7J8Q851-F1-model_v4 AAA ATPase AAA+ lid domain-containing protein 0.9721 288 385
AF-A0A5K1DAV5-F1-model_v4 AAA+ ATPase domain-containing protein 0.9717 141 391 GO:0005524
GO:0005745
GO:0008237
GO:0009535
GO:0016887
GO:0034982
AF-A0A7J0EVX7-F1-model_v4 Regulatory particle triple-A ATPase 5A 0.9687 287 385 GO:0005524
GO:0016887
AF-E3NMZ7-F1-model_v4 AAA ATPase AAA+ lid domain-containing protein 0.9664 288 385 GO:0000502
GO:0005634
GO:0005737
AF-A0A7X1NZ33-F1-model_v4 AAA family ATPase 0.9627 141 336 GO:0004176
GO:0005524
GO:0005886
GO:0006508
GO:0016887
GO:0030163

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pLDDT pTM Quality
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