F436993

General Info

Members Datasets Scaffolds Average Seq Length
409 185 409 439

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_10052931|Ga0157375_100529313
Length 497
Sequence LRPQDVIRKKRDGAQLSREEIGFFIEGVTSGSIADYQISALLMAIFLKGMNDAEQEILTEAMLHSGNVLDFSSIAKPKADKHSTGGVGDKTSLLIAPMVAACGVCVPMISGRGLGHTGGTLDKLESIPGYRVGLSASEFENVLQTVGYAMSGQTAELAPADKKMYALRDATATVEAIPLIVASIISKKGAAGLDAMVIDVKVGSGAFMREQERAQALAHALVKTGNSCGIRTRALLTDMNQPLGRAVGNSVEVKECIELLRGEVEEGARPVLDLSIELSAHMLMLAHVDDSLVAARGRLQNILSSGKALESFRANVAAQGGDPRVCDEPAKFLPLATESFKVESARSGFVKAVETADIGHAIAAIGGGRVRIEDEIDPSVGFLTDVKIGDRINAGESLGTVYCDDAAKAKEAVRALQSAYEIGDEPVAELLLVKEVINECSWRSGLSFQFCWCSRFSVPRVTARVIVPTINPRFMSASCSISAAKTIALSTPLLLQV

Samples

Sample ID Description Type Environment
1 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
18 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
25 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
26 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
27 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
36 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
37 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
41 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
42 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
43 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
44 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
45 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
46 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
47 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
48 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
49 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
50 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
51 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
52 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
53 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
54 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
55 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
56 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
57 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
58 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
59 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
60 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
61 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
62 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
64 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
65 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
66 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
67 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
68 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
69 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
70 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
71 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
72 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
73 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
74 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
75 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
76 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
77 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
78 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
79 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
80 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
81 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
82 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
83 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
84 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
85 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
86 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
87 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
88 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
89 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
90 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
91 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
92 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
93 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
94 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
95 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
96 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
140 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
142 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
143 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
144 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
145 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
146 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
147 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
148 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
149 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
150 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
151 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
152 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
153 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
154 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
155 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
156 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
157 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
158 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
159 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
160 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
161 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
162 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
163 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
164 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
165 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
166 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
167 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
168 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
169 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
170 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
172 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
173 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
174 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
175 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
176 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
177 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
178 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
179 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
180 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
181 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
182 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
183 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
184 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
185 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.24
Nodule 0
Rhizoplane 1.22
Rhizosphere 98.53
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24034J26672_10000003 3300002239 Bacteria 501747
2 JGI25406J46586_10002079 3300003203 Bacteria 9459
3 Ga0065714_10064464 3300005288 Bacteria 65432
4 Ga0065704_10001861 3300005289 Bacteria 7794
5 Ga0065712_10000137 3300005290 Bacteria 65446
6 Ga0065712_10011072 3300005290 Bacteria 2559
7 Ga0065712_10109442 3300005290 Unclassified 1855
8 Ga0065715_10000563 3300005293 Bacteria 10247
9 Ga0065715_10021810 3300005293 Unclassified 2033
10 Ga0065715_10089347 3300005293 Bacteria 10986
11 Ga0065715_10096590 3300005293 Bacteria 3841
12 Ga0065715_10107321 3300005293 Bacteria 2778
13 Ga0065715_10123708 3300005293 Bacteria 2171
14 Ga0065707_10001299 3300005295 Bacteria 14358
15 Ga0065707_10120455 3300005295 Bacteria 2134
16 Ga0070683_100327539 3300005329 Bacteria 1458
17 Ga0070690_100001096 3300005330 Bacteria 13932
18 Ga0070690_100006527 3300005330 Bacteria 6620
19 Ga0070670_100000070 3300005331 Bacteria 103166
20 Ga0070670_100002164 3300005331 Bacteria 16137
21 Ga0068869_100047398 3300005334 Bacteria 3103
22 Ga0070666_10060896 3300005335 Unclassified 2555
23 Ga0070680_100027739 3300005336 Bacteria 4537
24 Ga0070682_100000114 3300005337 Bacteria 71510
25 Ga0068868_100107159 3300005338 Unclassified 2268
26 Ga0070689_100148694 3300005340 Bacteria 1888
27 Ga0070687_100006704 3300005343 Bacteria 4740
28 Ga0070692_10034905 3300005345 Unclassified 2543
29 Ga0070668_100008395 3300005347 Bacteria 7670
30 Ga0070671_100003165 3300005355 Bacteria 12836
31 Ga0070671_100022606 3300005355 Bacteria 5136
32 Ga0070671_100039267 3300005355 Bacteria 3929
33 Ga0070673_100001622 3300005364 Bacteria 13310
34 Ga0070673_100022969 3300005364 Bacteria 4550
35 Ga0070673_100081910 3300005364 Bacteria 2618
36 Ga0070673_100099447 3300005364 Bacteria 2393
37 Ga0070673_100099772 3300005364 Bacteria 2389
38 Ga0070659_100014594 3300005366 Bacteria 5874
39 Ga0070667_100020626 3300005367 Bacteria 5471
40 Ga0070667_100113676 3300005367 Bacteria 2350
41 Ga0070703_10000463 3300005406 Bacteria 16097
42 Ga0070705_100002403 3300005440 Bacteria 9426
43 Ga0070700_100000283 3300005441 Bacteria 26787
44 Ga0070700_100018984 3300005441 Bacteria 3963
45 Ga0070700_100041254 3300005441 Bacteria 2829
46 Ga0070700_100050969 3300005441 Bacteria 2575
47 Ga0070694_100002359 3300005444 Bacteria 11157
48 Ga0070694_100002444 3300005444 Bacteria 10969
49 Ga0070694_100011461 3300005444 Bacteria 5491
50 Ga0070694_100017006 3300005444 Bacteria 4589
51 Ga0070694_100017573 3300005444 Bacteria 4522
52 Ga0070694_100075768 3300005444 Bacteria 2327
53 Ga0070694_100082286 3300005444 Bacteria 2242
54 Ga0070694_100094529 3300005444 Bacteria 2103
55 Ga0070708_100000903 3300005445 Bacteria 22490
56 Ga0070708_100253820 3300005445 Bacteria 1652
57 Ga0070662_100109959 3300005457 Bacteria 2098
58 Ga0070681_10000108 3300005458 Bacteria 61616
59 Ga0070681_10002318 3300005458 Bacteria 17402
60 Ga0070681_10028304 3300005458 Bacteria 5633
61 Ga0068867_100058122 3300005459 Bacteria 2866
62 Ga0068867_100062938 3300005459 Unclassified 2758
63 Ga0068867_100121261 3300005459 Bacteria 2021
64 Ga0070706_100000216 3300005467 Bacteria 71047
65 Ga0070706_100003795 3300005467 Bacteria 14752
66 Ga0070706_100009885 3300005467 Bacteria 8859
67 Ga0070706_100010152 3300005467 Bacteria 8755
68 Ga0070706_100014478 3300005467 Bacteria 7286
69 Ga0070706_100020930 3300005467 Bacteria 6022
70 Ga0070706_100023404 3300005467 Bacteria 5689
71 Ga0070707_100000089 3300005468 Bacteria 82091
72 Ga0070707_100027017 3300005468 Bacteria 5456
73 Ga0070707_100036999 3300005468 Bacteria 4657
74 Ga0070707_100097343 3300005468 Unclassified 2850
75 Ga0070698_100000726 3300005471 Bacteria 35381
76 Ga0070698_100002253 3300005471 Bacteria 21337
77 Ga0070698_100005354 3300005471 Bacteria 14037
78 Ga0070698_100008889 3300005471 Bacteria 10798
79 Ga0070698_100018313 3300005471 Bacteria 7373
80 Ga0070698_100021015 3300005471 Bacteria 6838
81 Ga0070698_100029312 3300005471 Bacteria 5712
82 Ga0070698_100059444 3300005471 Bacteria 3860
83 Ga0070699_100011222 3300005518 Bacteria 7739
84 Ga0070699_100050348 3300005518 Bacteria 3607
85 Ga0070699_100338130 3300005518 Bacteria 1355
86 Ga0070679_100000130 3300005530 Bacteria 60396
87 Ga0070697_100000067 3300005536 Bacteria 83699
88 Ga0070697_100021126 3300005536 Bacteria 5156
89 Ga0070697_100040465 3300005536 Bacteria 3771
90 Ga0068853_100003126 3300005539 Bacteria 12658
91 Ga0068853_100081449 3300005539 Bacteria 2834
92 Ga0070672_100120069 3300005543 Bacteria 2151
93 Ga0070686_100001061 3300005544 Bacteria 15853
94 Ga0070686_100001441 3300005544 Bacteria 13442
95 Ga0070686_100140825 3300005544 Bacteria 1679
96 Ga0070695_100024696 3300005545 Bacteria 3705
97 Ga0070695_100030240 3300005545 Bacteria 3371
98 Ga0070695_100051172 3300005545 Bacteria 2650
99 Ga0070696_100042077 3300005546 Bacteria 3158
100 Ga0070696_100057794 3300005546 Bacteria 2708
101 Ga0070693_100003344 3300005547 Bacteria 7454
102 Ga0070693_100024101 3300005547 Bacteria 3259
103 Ga0070704_100004906 3300005549 Bacteria 7764
104 Ga0070704_100015994 3300005549 Bacteria 4728
105 Ga0070664_100007717 3300005564 Bacteria 8689
106 Ga0070664_100047482 3300005564 Bacteria 3627
107 Ga0068857_100010511 3300005577 Bacteria 8046
108 Ga0068857_100060532 3300005577 Bacteria 3363
109 Ga0068854_100060522 3300005578 Unclassified 2740
110 Ga0068854_100076674 3300005578 Bacteria 2458
111 Ga0070702_100002516 3300005615 Bacteria 7948
112 Ga0070702_100030323 3300005615 Bacteria 2948
113 Ga0068852_100069940 3300005616 Bacteria 3078
114 Ga0068859_100015477 3300005617 Bacteria 7663
115 Ga0068859_100097613 3300005617 Bacteria 2991
116 Ga0068859_100108216 3300005617 Bacteria 2841
117 Ga0068859_100154192 3300005617 Bacteria 2373
118 Ga0068859_100225764 3300005617 Bacteria 1961
119 Ga0068864_100002023 3300005618 Bacteria 16729
120 Ga0068864_100021014 3300005618 Bacteria 5466
121 Ga0068864_100033295 3300005618 Bacteria 4381
122 Ga0068864_100044613 3300005618 Bacteria 3801
123 Ga0068864_100073716 3300005618 Bacteria 2976
124 Ga0068864_100136311 3300005618 Bacteria 2210
125 Ga0068866_10007320 3300005718 Bacteria 4620
126 Ga0068866_10008146 3300005718 Unclassified 4405
127 Ga0068861_100001677 3300005719 Bacteria 14191
128 Ga0068861_100017966 3300005719 Bacteria 5029
129 Ga0068861_100020446 3300005719 Unclassified 4742
130 Ga0068861_100106262 3300005719 Bacteria 2242
131 Ga0068851_10011096 3300005834 Bacteria 4220
132 Ga0068870_10058228 3300005840 Bacteria 2068
133 Ga0068863_100004782 3300005841 Bacteria 13342
134 Ga0068863_100035558 3300005841 Bacteria 4744
135 Ga0068863_100065993 3300005841 Bacteria 3424
136 Ga0068858_100019011 3300005842 Bacteria 6429
137 Ga0068858_100054722 3300005842 Bacteria 3690
138 Ga0068858_100073447 3300005842 Unclassified 3174
139 Ga0068858_100271560 3300005842 Bacteria 1614
140 Ga0068860_100015199 3300005843 Bacteria 7519
141 Ga0068860_100047638 3300005843 Bacteria 4085
142 Ga0068860_100052660 3300005843 Bacteria 3871
143 Ga0068860_100054981 3300005843 Bacteria 3783
144 Ga0068862_100013632 3300005844 Bacteria 6732
145 Ga0068862_100053333 3300005844 Bacteria 3461
146 Ga0081539_10000156 3300005985 Bacteria 158871
147 Ga0081539_10001579 3300005985 Bacteria 37669
148 Ga0081539_10003279 3300005985 Bacteria 20298
149 Ga0081539_10049359 3300005985 Bacteria 2389
150 Ga0070715_10000005 3300006163 Bacteria 298716
151 Ga0097621_100103131 3300006237 Bacteria 2402
152 Ga0068871_100040167 3300006358 Bacteria 3747
153 Ga0068871_100055223 3300006358 Bacteria 3224
154 Ga0068871_100076166 3300006358 Bacteria 2770
155 Ga0068871_100169323 3300006358 Bacteria 1871
156 Ga0075428_100288463 3300006844 Bacteria 1765
157 Ga0075433_10038975 3300006852 Bacteria 4107
158 Ga0075433_10068604 3300006852 Bacteria 3113
159 Ga0075433_10073153 3300006852 Bacteria 3014
160 Ga0075433_10086218 3300006852 Bacteria 2773
161 Ga0075433_10101874 3300006852 Bacteria 2542
162 Ga0075434_100008484 3300006871 Bacteria 9560
163 Ga0075434_100090613 3300006871 Bacteria 3059
164 Ga0075434_100091587 3300006871 Unclassified 3042
165 Ga0075434_100104802 3300006871 Bacteria 2838
166 Ga0075429_100051185 3300006880 Bacteria 3594
167 Ga0075436_100002753 3300006914 Bacteria 12084
168 Ga0097620_100015476 3300006931 Bacteria 7663
169 Ga0097620_100021386 3300006931 Bacteria 6493
170 Ga0097620_100097611 3300006931 Bacteria 2991
171 Ga0097620_100108218 3300006931 Bacteria 2841
172 Ga0097620_100154193 3300006931 Bacteria 2373
173 Ga0097620_100225787 3300006931 Bacteria 1961
174 Ga0075435_100010336 3300007076 Bacteria 6822
175 Ga0075435_100301859 3300007076 Bacteria 1369
176 Ga0099794_10000839 3300007265 Bacteria 10379
177 Ga0105240_10024057 3300009093 Bacteria 8043
178 Ga0111539_10004231 3300009094 Bacteria 18817
179 Ga0111539_10006298 3300009094 Bacteria 15318
180 Ga0111539_10086576 3300009094 Bacteria 3682
181 Ga0105245_10100130 3300009098 Bacteria 2681
182 Ga0105247_10000003 3300009101 Bacteria 694517
183 Ga0105247_10005644 3300009101 Bacteria 7846
184 Ga0105247_10121064 3300009101 Bacteria 1695
185 Ga0114129_10022101 3300009147 Bacteria 9027
186 Ga0114129_10023743 3300009147 Bacteria 8692
187 Ga0114129_10026053 3300009147 Bacteria 8281
188 Ga0114129_10052597 3300009147 Bacteria 5716
189 Ga0114129_10126509 3300009147 Bacteria 3513
190 Ga0114129_10239877 3300009147 Unclassified 2437
191 Ga0105243_10000022 3300009148 Bacteria 203002
192 Ga0105243_10005236 3300009148 Bacteria 10148
193 Ga0105243_10009992 3300009148 Bacteria 7213
194 Ga0105243_10096529 3300009148 Bacteria 2445
195 Ga0105241_10106172 3300009174 Unclassified 2241
196 Ga0105242_10001085 3300009176 Bacteria 21382
197 Ga0105242_10001862 3300009176 Bacteria 16553
198 Ga0105242_10072632 3300009176 Bacteria 2858
199 Ga0105242_10102037 3300009176 Bacteria 2432
200 Ga0105242_10154173 3300009176 Bacteria 2005
201 Ga0105248_10000847 3300009177 Bacteria 34381
202 Ga0105248_10002516 3300009177 Bacteria 20400
203 Ga0105248_10019190 3300009177 Bacteria 7564
204 Ga0105237_10001294 3300009545 Bacteria 33284
205 Ga0105237_10021252 3300009545 Bacteria 6675
206 Ga0105238_10038762 3300009551 Bacteria 4838
207 Ga0105249_10002142 3300009553 Bacteria 17106
208 Ga0105249_10010527 3300009553 Bacteria 8124
209 Ga0105249_10017048 3300009553 Bacteria 6446
210 Ga0105249_10024528 3300009553 Bacteria 5421
211 Ga0105249_10080135 3300009553 Bacteria 3032
212 Ga0105239_10030142 3300010375 Bacteria 5965
213 Ga0105239_10049499 3300010375 Bacteria 4608
214 Ga0105246_10075876 3300011119 Unclassified 2381
215 Ga0157373_10046461 3300013100 Bacteria 3098
216 Ga0157378_10000184 3300013297 Bacteria 59983
217 Ga0157378_10002942 3300013297 Bacteria 15148
218 Ga0157378_10011997 3300013297 Bacteria 7587
219 Ga0157378_10024243 3300013297 Bacteria 5336
220 Ga0157378_10030804 3300013297 Bacteria 4737
221 Ga0157378_10032603 3300013297 Bacteria 4603
222 Ga0157378_10052100 3300013297 Bacteria 3641
223 Ga0157378_10108693 3300013297 Bacteria 2540
224 Ga0157378_10150314 3300013297 Bacteria 2169
225 Ga0163162_10000023 3300013306 Bacteria 193395
226 Ga0163162_10003725 3300013306 Bacteria 14606
227 Ga0163162_10008009 3300013306 Bacteria 10307
228 Ga0163162_10017551 3300013306 Bacteria 7004
229 Ga0163162_10086117 3300013306 Bacteria 3219
230 Ga0163162_10088315 3300013306 Bacteria 3180
231 Ga0163162_10228371 3300013306 Unclassified 1992
232 Ga0157372_10053602 3300013307 Bacteria 4496
233 Ga0157372_10149969 3300013307 Unclassified 2690
234 Ga0157375_10010020 3300013308 Bacteria 8334
235 Ga0157375_10052931 3300013308 Bacteria 3993
236 Ga0157375_10187903 3300013308 Bacteria 2220
237 Ga0157375_10372142 3300013308 Bacteria 1595
238 Ga0163163_10003486 3300014325 Bacteria 13352
239 Ga0163163_10022541 3300014325 Bacteria 5966
240 Ga0163163_10030835 3300014325 Bacteria 5171
241 Ga0163163_10135880 3300014325 Unclassified 2500
242 Ga0157380_10002737 3300014326 Bacteria 11973
243 Ga0157380_10004230 3300014326 Bacteria 9929
244 Ga0157380_10038663 3300014326 Bacteria 3706
245 Ga0157377_10003647 3300014745 Bacteria 6979
246 Ga0157376_10003941 3300014969 Bacteria 10267
247 Ga0157376_10036929 3300014969 Bacteria 3961
248 Ga0163161_10003066 3300017792 Bacteria 11786
249 Ga0163161_10009187 3300017792 Bacteria 6833
250 Ga0207656_10004005 3300025321 Bacteria 5108
251 Ga0207653_10000223 3300025885 Bacteria 37689
252 Ga0207653_10000545 3300025885 Bacteria 13919
253 Ga0207653_10017778 3300025885 Bacteria 2239
254 Ga0207642_10024236 3300025899 Unclassified 2437
255 Ga0207710_10000001 3300025900 Bacteria 1797433
256 Ga0207647_10015356 3300025904 Bacteria 5251
257 Ga0207685_10000020 3300025905 Bacteria 138584
258 Ga0207643_10008755 3300025908 Bacteria 5431
259 Ga0207684_10000117 3300025910 Bacteria 148207
260 Ga0207684_10007539 3300025910 Bacteria 9787
261 Ga0207684_10026892 3300025910 Bacteria 4906
262 Ga0207684_10038330 3300025910 Bacteria 4066
263 Ga0207707_10000013 3300025912 Bacteria 264517
264 Ga0207707_10002535 3300025912 Bacteria 16393
265 Ga0207707_10021089 3300025912 Bacteria 5693
266 Ga0207707_10064198 3300025912 Bacteria 3196
267 Ga0207671_10001043 3300025914 Bacteria 33697
268 Ga0207660_10005991 3300025917 Bacteria 7894
269 Ga0207660_10121814 3300025917 Bacteria 1976
270 Ga0207649_10034099 3300025920 Unclassified 3047
271 Ga0207652_10000071 3300025921 Bacteria 109636
272 Ga0207652_10010867 3300025921 Bacteria 7336
273 Ga0207646_10000881 3300025922 Bacteria 38734
274 Ga0207646_10038094 3300025922 Bacteria 4332
275 Ga0207646_10130024 3300025922 Bacteria 2266
276 Ga0207681_10004215 3300025923 Bacteria 8887
277 Ga0207694_10164991 3300025924 Bacteria 1791
278 Ga0207650_10000017 3300025925 Bacteria 354674
279 Ga0207650_10000890 3300025925 Bacteria 22583
280 Ga0207650_10157506 3300025925 Bacteria 1797
281 Ga0207659_10036860 3300025926 Bacteria 3392
282 Ga0207644_10000339 3300025931 Bacteria 30299
283 Ga0207690_10042478 3300025932 Bacteria 2986
284 Ga0207706_10113193 3300025933 Bacteria 2387
285 Ga0207686_10000002 3300025934 Bacteria 453961
286 Ga0207686_10003379 3300025934 Bacteria 8571
287 Ga0207709_10000012 3300025935 Bacteria 552803
288 Ga0207709_10017359 3300025935 Bacteria 4017
289 Ga0207709_10112006 3300025935 Bacteria 1827
290 Ga0207670_10059344 3300025936 Unclassified 2602
291 Ga0207670_10095723 3300025936 Bacteria 2110
292 Ga0207665_10000001 3300025939 Bacteria 279842
293 Ga0207665_10085121 3300025939 Bacteria 2182
294 Ga0207691_10007074 3300025940 Bacteria 10828
295 Ga0207691_10083089 3300025940 Bacteria 2876
296 Ga0207711_10004200 3300025941 Bacteria 12328
297 Ga0207711_10010258 3300025941 Bacteria 7778
298 Ga0207689_10013037 3300025942 Bacteria 7098
299 Ga0207689_10021221 3300025942 Bacteria 5460
300 Ga0207689_10047055 3300025942 Bacteria 3563
301 Ga0207689_10174078 3300025942 Bacteria 1775
302 Ga0207679_10194754 3300025945 Bacteria 1688
303 Ga0207651_10000827 3300025960 Bacteria 13412
304 Ga0207651_10044759 3300025960 Unclassified 2965
305 Ga0207651_10071103 3300025960 Bacteria 2465
306 Ga0207712_10000785 3300025961 Bacteria 23685
307 Ga0207712_10013056 3300025961 Bacteria 5322
308 Ga0207658_10047868 3300025986 Bacteria 3132
309 Ga0207677_10104958 3300026023 Bacteria 2090
310 Ga0207703_10000080 3300026035 Bacteria 111786
311 Ga0207703_10014690 3300026035 Bacteria 6110
312 Ga0207703_10213541 3300026035 Bacteria 1722
313 Ga0207703_10241654 3300026035 Bacteria 1624
314 Ga0207639_10011950 3300026041 Bacteria 6041
315 Ga0207639_10128674 3300026041 Bacteria 2093
316 Ga0207708_10000057 3300026075 Bacteria 97103
317 Ga0207708_10029986 3300026075 Bacteria 4125
318 Ga0207708_10050534 3300026075 Bacteria 3165
319 Ga0207702_10007198 3300026078 Bacteria 9522
320 Ga0207641_10065160 3300026088 Bacteria 3116
321 Ga0207648_10008116 3300026089 Bacteria 10219
322 Ga0207648_10125303 3300026089 Bacteria 2260
323 Ga0207648_10148664 3300026089 Bacteria 2067
324 Ga0207676_10017817 3300026095 Bacteria 5153
325 Ga0207676_10054253 3300026095 Bacteria 3140
326 Ga0207674_10000136 3300026116 Bacteria 84993
327 Ga0207674_10028353 3300026116 Bacteria 5911
328 Ga0207674_10057884 3300026116 Bacteria 3928
329 Ga0207674_10095166 3300026116 Bacteria 2965
330 Ga0207675_100001706 3300026118 Bacteria 22007
331 Ga0207675_100004788 3300026118 Bacteria 13036
332 Ga0207675_100011058 3300026118 Bacteria 8454
333 Ga0207675_100114227 3300026118 Bacteria 2550
334 Ga0209588_1002418 3300027671 Bacteria 5055
335 Ga0207428_10002259 3300027907 Bacteria 19342
336 Ga0207428_10014377 3300027907 Bacteria 6880
337 Ga0207428_10026996 3300027907 Bacteria 4784
338 Ga0268264_10056203 3300028381 Bacteria 3290
339 Ga0268264_10068897 3300028381 Bacteria 2991
340 Ga0268264_10081130 3300028381 Bacteria 2772
341 Ga0268264_10170318 3300028381 Bacteria 1969
342 Ga0307405_10028182 3300031731 Bacteria 3268
343 Ga0307410_10010965 3300031852 Bacteria 5162
344 Ga0307406_10085343 3300031901 Bacteria 2111
345 Ga0307407_10016355 3300031903 Bacteria 3693
346 Ga0307409_100299622 3300031995 Bacteria 1495
347 Ga0307416_100136530 3300032002 Bacteria 2220
348 Ga0307415_100091241 3300032126 Bacteria 2206
349 Ga0307415_100141284 3300032126 Bacteria 1839
350 Ga0373937_0064588 3300036401 Bacteria 3367
351 Ga0395898_0136024 3300037466 Bacteria 2353
352 Ga0395905_0002980 3300037471 Bacteria 18375
353 Ga0439448_0043887 3300042005 Bacteria 1453
354 Ga0451577_0002047 3300042876 Bacteria 24964
355 Ga0453683_0024837 3300044673 Unclassified 3810
356 Ga0453684_0111071 3300044712 Bacteria 3331
357 Ga0451576_0036810 3300045051 Bacteria 5186
358 Ga0451576_0078582 3300045051 Bacteria 3433
359 Ga0451576_0327425 3300045051 Bacteria 1604
360 Ga0495663_0000171 3300046525 Bacteria 26086
361 Ga0495598_0000567 3300046537 Bacteria 6952
362 Ga0495621_0000156 3300046539 Bacteria 15052
363 Ga0495621_0003016 3300046539 Bacteria 4595
364 Ga0495659_0029169 3300046664 Bacteria 1914
365 Ga0495658_0034036 3300046683 Bacteria 2794
366 Ga0495613_0162014 3300046689 Bacteria 1591
367 Ga0496102_0022184 3300048905 Bacteria 5623
368 Ga0496104_0065244 3300048907 Bacteria 3454
369 Ga0496106_0000853 3300048909 Bacteria 22105
370 Ga0496110_0205500 3300048913 Unclassified 1790
371 Ga0496113_0151079 3300048916 Bacteria 1832
372 Ga0501292_001117 3300049515 Bacteria 3280
373 Ga0501297_004557 3300049520 Bacteria 1422
374 Ga0501298_003901 3300049521 Bacteria 2329
375 Ga0501298_007377 3300049521 Bacteria 1822
376 Ga0501038_0006816 3300049574 Bacteria 10554
377 Ga0501207_002079 3300049654 Bacteria 2559
378 Ga0501217_000550 3300049661 Bacteria 6273
379 Ga0501223_003650 3300049663 Bacteria 3327
380 Ga0501223_006995 3300049663 Bacteria 2317
381 Ga0501233_001402 3300049668 Bacteria 4117
382 Ga0501233_007896 3300049668 Bacteria 2038
383 Ga0501243_007471 3300049675 Bacteria 1670
384 Ga0501225_0005182 3300049705 Bacteria 3837
385 Ga0501225_0005763 3300049705 Bacteria 3626
386 Ga0501225_0007309 3300049705 Bacteria 3202
387 Ga0501234_001470 3300049707 Bacteria 3702
388 Ga0501079_0044424 3300049741 Bacteria 3429
389 nmdc:mga05p37_110823_c1 3300050507 Bacteria 3376
390 nmdc:mga05p37_53859_c1 3300050507 Bacteria 4949
391 nmdc:mga05p37_5479_c1 3300050507 Bacteria 14903
392 nmdc:mga05p37_73582_c1 3300050507 Bacteria 4205
393 nmdc:mga05p37_89301_c1 3300050507 Bacteria 3797
394 nmdc:mga09592_21747_c1 3300050508 Bacteria 5288
395 nmdc:mga09592_34041_c1 3300050508 Bacteria 4258
396 nmdc:mga08y16_16471_c1 3300050511 Bacteria 7774
397 nmdc:mga08y16_2220_c1 3300050511 Bacteria 19906
398 nmdc:mga0n895_104341_c1 3300050512 Bacteria 2847
399 nmdc:mga0n895_131268_c1 3300050512 Bacteria 2530
400 nmdc:mga0n895_349393_c1 3300050512 Bacteria 1498
401 nmdc:mga0n895_57872_c1 3300050512 Bacteria 3821
402 nmdc:mga0n895_95603_c1 3300050512 Unclassified 2976
403 nmdc:mga08x19_2538_c1 3300050514 Bacteria 10116
404 nmdc:mga0a205_112259_c1 3300050515 Bacteria 2625
405 nmdc:mga0a205_15522_c1 3300050515 Bacteria 2970
406 nmdc:mga0a205_20531_c1 3300050515 Bacteria 6234
407 nmdc:mga0a205_31908_c1 3300050515 Bacteria 5049
408 nmdc:mga0a205_42203_c1 3300050515 Bacteria 4395
409 Ga0500616_0003347 3300053153 Bacteria 12331

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005364 Ga0070673_100099447 Ga0070673_1000994472 397
2 3300005364 Ga0070673_100099772 Ga0070673_1000997722 397
3 3300005441 Ga0070700_100050969 Ga0070700_1000509692 397
4 3300005459 Ga0068867_100121261 Ga0068867_1001212612 397
5 3300014969 Ga0157376_10003941 Ga0157376_100039415 397
6 3300046689 Ga0495613_0162014 Ga0495613_0162014_17_1255 411
7 3300025931 Ga0207644_10000339 Ga0207644_1000033926 415
8 3300007265 Ga0099794_10000839 Ga0099794_100008396 420
9 3300027671 Ga0209588_1002418 Ga0209588_10024183 420
10 3300005444 Ga0070694_100002444 Ga0070694_10000244412 423
11 3300005471 Ga0070698_100000726 Ga0070698_10000072618 424
12 3300005564 Ga0070664_100007717 Ga0070664_1000077176 424
13 3300006163 Ga0070715_10000005 Ga0070715_1000000538 424
14 3300025905 Ga0207685_10000020 Ga0207685_10000020115 424
15 3300053153 Ga0500616_0003347 Ga0500616_0003347_3845_5170 424
16 3300005444 Ga0070694_100002359 Ga0070694_1000023598 426
17 3300005471 Ga0070698_100059444 Ga0070698_1000594443 426
18 3300009147 Ga0114129_10022101 Ga0114129_1002210112 426
19 3300025939 Ga0207665_10000001 Ga0207665_1000000173 426
20 3300031731 Ga0307405_10028182 Ga0307405_100281821 426
21 3300005295 Ga0065707_10120455 Ga0065707_101204552 428
22 3300005334 Ga0068869_100047398 Ga0068869_1000473983 428
23 3300005444 Ga0070694_100082286 Ga0070694_1000822862 428
24 3300005468 Ga0070707_100000089 Ga0070707_10000008910 428
25 3300005549 Ga0070704_100004906 Ga0070704_1000049064 428
26 3300025922 Ga0207646_10000881 Ga0207646_1000088123 428
27 3300025942 Ga0207689_10047055 Ga0207689_100470553 428
28 3300005467 Ga0070706_100009885 Ga0070706_1000098856 430
29 3300009148 Ga0105243_10096529 Ga0105243_100965292 430
30 3300025910 Ga0207684_10007539 Ga0207684_100075396 430
31 3300025935 Ga0207709_10112006 Ga0207709_101120062 430
32 3300005536 Ga0070697_100040465 Ga0070697_1000404654 431
33 3300049515 Ga0501292_001117 Ga0501292_001117_1146_2447 432
34 3300042876 Ga0451577_0002047 Ga0451577_0002047_1530_2852 434
35 3300044712 Ga0453684_0111071 Ga0453684_0111071_1334_2656 434
36 3300005544 Ga0070686_100140825 Ga0070686_1001408252 437
37 3300005547 Ga0070693_100024101 Ga0070693_1000241012 437
38 3300009176 Ga0105242_10001862 Ga0105242_1000186211 437
39 3300013297 Ga0157378_10030804 Ga0157378_100308042 437
40 3300025934 Ga0207686_10003379 Ga0207686_100033795 437
41 3300005441 Ga0070700_100000283 Ga0070700_1000002834 438
42 3300005444 Ga0070694_100017006 Ga0070694_1000170064 438
43 3300005458 Ga0070681_10002318 Ga0070681_100023184 438
44 3300005545 Ga0070695_100030240 Ga0070695_1000302404 438
45 3300005546 Ga0070696_100042077 Ga0070696_1000420771 438
46 3300005546 Ga0070696_100057794 Ga0070696_1000577942 438
47 3300005617 Ga0068859_100015477 Ga0068859_1000154774 438
48 3300005618 Ga0068864_100073716 Ga0068864_1000737162 438
49 3300005718 Ga0068866_10007320 Ga0068866_100073204 438
50 3300005840 Ga0068870_10058228 Ga0068870_100582282 438
51 3300005841 Ga0068863_100065993 Ga0068863_1000659932 438
52 3300005844 Ga0068862_100013632 Ga0068862_1000136323 438
53 3300006852 Ga0075433_10068604 Ga0075433_100686042 438
54 3300006871 Ga0075434_100008484 Ga0075434_1000084845 438
55 3300006871 Ga0075434_100090613 Ga0075434_1000906132 438
56 3300006880 Ga0075429_100051185 Ga0075429_1000511853 438
57 3300006931 Ga0097620_100015476 Ga0097620_1000154764 438
58 3300006931 Ga0097620_100021386 Ga0097620_1000213862 438
59 3300009147 Ga0114129_10052597 Ga0114129_100525978 438
60 3300009147 Ga0114129_10126509 Ga0114129_101265092 438
61 3300009148 Ga0105243_10000022 Ga0105243_10000022158 438
62 3300009176 Ga0105242_10001085 Ga0105242_100010853 438
63 3300009176 Ga0105242_10102037 Ga0105242_101020373 438
64 3300009177 Ga0105248_10000847 Ga0105248_1000084712 438
65 3300011119 Ga0105246_10075876 Ga0105246_100758761 438
66 3300013297 Ga0157378_10011997 Ga0157378_100119976 438
67 3300013297 Ga0157378_10108693 Ga0157378_101086932 438
68 3300013297 Ga0157378_10150314 Ga0157378_101503142 438
69 3300013308 Ga0157375_10052931 Ga0157375_100529313 438
70 3300017792 Ga0163161_10009187 Ga0163161_100091874 438
71 3300025885 Ga0207653_10000223 Ga0207653_1000022320 438
72 3300025908 Ga0207643_10008755 Ga0207643_100087556 438
73 3300025912 Ga0207707_10002535 Ga0207707_100025354 438
74 3300025912 Ga0207707_10064198 Ga0207707_100641983 438
75 3300025922 Ga0207646_10130024 Ga0207646_101300242 438
76 3300025925 Ga0207650_10157506 Ga0207650_101575062 438
77 3300025934 Ga0207686_10000002 Ga0207686_10000002206 438
78 3300025935 Ga0207709_10000012 Ga0207709_1000001226 438
79 3300025941 Ga0207711_10004200 Ga0207711_1000420012 438
80 3300025942 Ga0207689_10174078 Ga0207689_101740782 438
81 3300026075 Ga0207708_10000057 Ga0207708_1000005760 438
82 3300026088 Ga0207641_10065160 Ga0207641_100651602 438
83 3300026116 Ga0207674_10095166 Ga0207674_100951661 438
84 3300027907 Ga0207428_10026996 Ga0207428_100269961 438
85 3300031852 Ga0307410_10010965 Ga0307410_100109652 438
86 3300031903 Ga0307407_10016355 Ga0307407_100163552 438
87 3300032002 Ga0307416_100136530 Ga0307416_1001365302 438
88 3300032126 Ga0307415_100141284 Ga0307415_1001412842 438
89 3300037466 Ga0395898_0136024 Ga0395898_0136024_289_1608 438
90 3300037471 Ga0395905_0002980 Ga0395905_0002980_10222_11541 438
91 3300042005 Ga0439448_0043887 Ga0439448_0043887_68_1387 438
92 3300045051 Ga0451576_0327425 Ga0451576_0327425_162_1481 438
93 3300046664 Ga0495659_0029169 Ga0495659_0029169_62_1381 438
94 3300049521 Ga0501298_007377 Ga0501298_007377_379_1698 438
95 3300049661 Ga0501217_000550 Ga0501217_000550_3070_4389 438
96 3300049663 Ga0501223_006995 Ga0501223_006995_404_1723 438
97 3300049675 Ga0501243_007471 Ga0501243_007471_145_1464 438
98 3300049705 Ga0501225_0005182 Ga0501225_0005182_948_2267 438
99 3300050507 nmdc:mga05p37_53859_c1 nmdc:mga05p37_53859_c1_3567_4886 438
100 3300050508 nmdc:mga09592_21747_c1 nmdc:mga09592_21747_c1_1016_2386 438
101 3300050512 nmdc:mga0n895_104341_c1 nmdc:mga0n895_104341_c1_1413_2732 438
102 3300050512 nmdc:mga0n895_349393_c1 nmdc:mga0n895_349393_c1_62_1381 438
103 3300050515 nmdc:mga0a205_42203_c1 nmdc:mga0a205_42203_c1_107_1426 438
104 3300002239 JGI24034J26672_10000003 JGI24034J26672_10000003382 439
105 3300003203 JGI25406J46586_10002079 JGI25406J46586_100020792 439
106 3300005288 Ga0065714_10064464 Ga0065714_1006446441 439
107 3300005289 Ga0065704_10001861 Ga0065704_100018613 439
108 3300005290 Ga0065712_10000137 Ga0065712_1000013741 439
109 3300005290 Ga0065712_10011072 Ga0065712_100110722 439
110 3300005290 Ga0065712_10109442 Ga0065712_101094422 439
111 3300005293 Ga0065715_10000563 Ga0065715_100005632 439
112 3300005293 Ga0065715_10021810 Ga0065715_100218102 439
113 3300005293 Ga0065715_10089347 Ga0065715_1008934715 439
114 3300005293 Ga0065715_10096590 Ga0065715_100965904 439
115 3300005293 Ga0065715_10107321 Ga0065715_101073212 439
116 3300005293 Ga0065715_10123708 Ga0065715_101237082 439
117 3300005295 Ga0065707_10001299 Ga0065707_1000129912 439
118 3300005329 Ga0070683_100327539 Ga0070683_1003275392 439
119 3300005330 Ga0070690_100001096 Ga0070690_1000010963 439
120 3300005330 Ga0070690_100006527 Ga0070690_1000065276 439
121 3300005331 Ga0070670_100000070 Ga0070670_1000000704 439
122 3300005331 Ga0070670_100002164 Ga0070670_1000021646 439
123 3300005335 Ga0070666_10060896 Ga0070666_100608962 439
124 3300005336 Ga0070680_100027739 Ga0070680_1000277395 439
125 3300005337 Ga0070682_100000114 Ga0070682_1000001145 439
126 3300005338 Ga0068868_100107159 Ga0068868_1001071592 439
127 3300005340 Ga0070689_100148694 Ga0070689_1001486942 439
128 3300005343 Ga0070687_100006704 Ga0070687_1000067042 439
129 3300005345 Ga0070692_10034905 Ga0070692_100349052 439
130 3300005347 Ga0070668_100008395 Ga0070668_1000083954 439
131 3300005355 Ga0070671_100003165 Ga0070671_1000031656 439
132 3300005355 Ga0070671_100022606 Ga0070671_1000226064 439
133 3300005355 Ga0070671_100039267 Ga0070671_1000392673 439
134 3300005364 Ga0070673_100001622 Ga0070673_1000016224 439
135 3300005364 Ga0070673_100022969 Ga0070673_1000229694 439
136 3300005364 Ga0070673_100081910 Ga0070673_1000819102 439
137 3300005366 Ga0070659_100014594 Ga0070659_1000145942 439
138 3300005367 Ga0070667_100020626 Ga0070667_1000206263 439
139 3300005367 Ga0070667_100113676 Ga0070667_1001136762 439
140 3300005406 Ga0070703_10000463 Ga0070703_100004638 439
141 3300005440 Ga0070705_100002403 Ga0070705_1000024034 439
142 3300005441 Ga0070700_100018984 Ga0070700_1000189842 439
143 3300005441 Ga0070700_100041254 Ga0070700_1000412542 439
144 3300005444 Ga0070694_100011461 Ga0070694_1000114614 439
145 3300005444 Ga0070694_100017573 Ga0070694_1000175734 439
146 3300005444 Ga0070694_100075768 Ga0070694_1000757681 439
147 3300005444 Ga0070694_100094529 Ga0070694_1000945292 439
148 3300005445 Ga0070708_100000903 Ga0070708_10000090318 439
149 3300005445 Ga0070708_100253820 Ga0070708_1002538202 439
150 3300005457 Ga0070662_100109959 Ga0070662_1001099592 439
151 3300005458 Ga0070681_10000108 Ga0070681_1000010849 439
152 3300005458 Ga0070681_10028304 Ga0070681_100283045 439
153 3300005459 Ga0068867_100058122 Ga0068867_1000581223 439
154 3300005459 Ga0068867_100062938 Ga0068867_1000629381 439
155 3300005467 Ga0070706_100000216 Ga0070706_10000021620 439
156 3300005467 Ga0070706_100003795 Ga0070706_10000379512 439
157 3300005467 Ga0070706_100010152 Ga0070706_1000101524 439
158 3300005467 Ga0070706_100014478 Ga0070706_1000144785 439
159 3300005467 Ga0070706_100020930 Ga0070706_1000209303 439
160 3300005467 Ga0070706_100023404 Ga0070706_1000234042 439
161 3300005468 Ga0070707_100027017 Ga0070707_1000270172 439
162 3300005468 Ga0070707_100036999 Ga0070707_1000369994 439
163 3300005468 Ga0070707_100097343 Ga0070707_1000973431 439
164 3300005471 Ga0070698_100002253 Ga0070698_10000225312 439
165 3300005471 Ga0070698_100005354 Ga0070698_1000053543 439
166 3300005471 Ga0070698_100008889 Ga0070698_1000088898 439
167 3300005471 Ga0070698_100018313 Ga0070698_1000183133 439
168 3300005471 Ga0070698_100021015 Ga0070698_1000210154 439
169 3300005471 Ga0070698_100029312 Ga0070698_1000293121 439
170 3300005518 Ga0070699_100011222 Ga0070699_1000112224 439
171 3300005518 Ga0070699_100050348 Ga0070699_1000503484 439
172 3300005518 Ga0070699_100338130 Ga0070699_1003381301 439
173 3300005530 Ga0070679_100000130 Ga0070679_10000013049 439
174 3300005536 Ga0070697_100000067 Ga0070697_10000006771 439
175 3300005536 Ga0070697_100021126 Ga0070697_1000211263 439
176 3300005539 Ga0068853_100003126 Ga0068853_1000031264 439
177 3300005539 Ga0068853_100081449 Ga0068853_1000814492 439
178 3300005543 Ga0070672_100120069 Ga0070672_1001200692 439
179 3300005544 Ga0070686_100001061 Ga0070686_10000106112 439
180 3300005544 Ga0070686_100001441 Ga0070686_1000014416 439
181 3300005545 Ga0070695_100024696 Ga0070695_1000246963 439
182 3300005545 Ga0070695_100051172 Ga0070695_1000511722 439
183 3300005547 Ga0070693_100003344 Ga0070693_1000033442 439
184 3300005549 Ga0070704_100015994 Ga0070704_1000159942 439
185 3300005564 Ga0070664_100047482 Ga0070664_1000474824 439
186 3300005577 Ga0068857_100010511 Ga0068857_1000105119 439
187 3300005577 Ga0068857_100060532 Ga0068857_1000605323 439
188 3300005578 Ga0068854_100060522 Ga0068854_1000605223 439
189 3300005578 Ga0068854_100076674 Ga0068854_1000766742 439
190 3300005615 Ga0070702_100002516 Ga0070702_1000025165 439
191 3300005615 Ga0070702_100030323 Ga0070702_1000303233 439
192 3300005616 Ga0068852_100069940 Ga0068852_1000699402 439
193 3300005617 Ga0068859_100097613 Ga0068859_1000976132 439
194 3300005617 Ga0068859_100108216 Ga0068859_1001082163 439
195 3300005617 Ga0068859_100154192 Ga0068859_1001541922 439
196 3300005617 Ga0068859_100225764 Ga0068859_1002257642 439
197 3300005618 Ga0068864_100002023 Ga0068864_10000202311 439
198 3300005618 Ga0068864_100021014 Ga0068864_1000210143 439
199 3300005618 Ga0068864_100033295 Ga0068864_1000332952 439
200 3300005618 Ga0068864_100044613 Ga0068864_1000446133 439
201 3300005618 Ga0068864_100136311 Ga0068864_1001363113 439
202 3300005718 Ga0068866_10008146 Ga0068866_100081464 439
203 3300005719 Ga0068861_100001677 Ga0068861_10000167714 439
204 3300005719 Ga0068861_100017966 Ga0068861_1000179663 439
205 3300005719 Ga0068861_100020446 Ga0068861_1000204465 439
206 3300005719 Ga0068861_100106262 Ga0068861_1001062622 439
207 3300005834 Ga0068851_10011096 Ga0068851_100110964 439
208 3300005841 Ga0068863_100004782 Ga0068863_1000047827 439
209 3300005841 Ga0068863_100035558 Ga0068863_1000355583 439
210 3300005842 Ga0068858_100019011 Ga0068858_1000190114 439
211 3300005842 Ga0068858_100054722 Ga0068858_1000547224 439
212 3300005842 Ga0068858_100073447 Ga0068858_1000734472 439
213 3300005842 Ga0068858_100271560 Ga0068858_1002715602 439
214 3300005843 Ga0068860_100015199 Ga0068860_1000151992 439
215 3300005843 Ga0068860_100047638 Ga0068860_1000476383 439
216 3300005843 Ga0068860_100052660 Ga0068860_1000526602 439
217 3300005843 Ga0068860_100054981 Ga0068860_1000549813 439
218 3300005844 Ga0068862_100053333 Ga0068862_1000533332 439
219 3300005985 Ga0081539_10000156 Ga0081539_1000015690 439
220 3300005985 Ga0081539_10001579 Ga0081539_1000157922 439
221 3300005985 Ga0081539_10003279 Ga0081539_1000327920 439
222 3300005985 Ga0081539_10049359 Ga0081539_100493591 439
223 3300006237 Ga0097621_100103131 Ga0097621_1001031313 439
224 3300006358 Ga0068871_100040167 Ga0068871_1000401673 439
225 3300006358 Ga0068871_100055223 Ga0068871_1000552234 439
226 3300006358 Ga0068871_100076166 Ga0068871_1000761662 439
227 3300006358 Ga0068871_100169323 Ga0068871_1001693232 439
228 3300006844 Ga0075428_100288463 Ga0075428_1002884632 439
229 3300006852 Ga0075433_10038975 Ga0075433_100389753 439
230 3300006852 Ga0075433_10073153 Ga0075433_100731532 439
231 3300006852 Ga0075433_10086218 Ga0075433_100862182 439
232 3300006852 Ga0075433_10101874 Ga0075433_101018742 439
233 3300006871 Ga0075434_100091587 Ga0075434_1000915874 439
234 3300006871 Ga0075434_100104802 Ga0075434_1001048022 439
235 3300006914 Ga0075436_100002753 Ga0075436_1000027537 439
236 3300006931 Ga0097620_100097611 Ga0097620_1000976112 439
237 3300006931 Ga0097620_100108218 Ga0097620_1001082183 439
238 3300006931 Ga0097620_100154193 Ga0097620_1001541932 439
239 3300006931 Ga0097620_100225787 Ga0097620_1002257872 439
240 3300007076 Ga0075435_100010336 Ga0075435_1000103367 439
241 3300007076 Ga0075435_100301859 Ga0075435_1003018591 439
242 3300009093 Ga0105240_10024057 Ga0105240_1002405710 439
243 3300009094 Ga0111539_10004231 Ga0111539_100042315 439
244 3300009094 Ga0111539_10006298 Ga0111539_100062986 439
245 3300009094 Ga0111539_10086576 Ga0111539_100865763 439
246 3300009098 Ga0105245_10100130 Ga0105245_101001302 439
247 3300009101 Ga0105247_10000003 Ga0105247_10000003375 439
248 3300009101 Ga0105247_10005644 Ga0105247_100056444 439
249 3300009101 Ga0105247_10121064 Ga0105247_101210642 439
250 3300009147 Ga0114129_10023743 Ga0114129_100237432 439
251 3300009147 Ga0114129_10026053 Ga0114129_100260535 439
252 3300009147 Ga0114129_10239877 Ga0114129_102398772 439
253 3300009148 Ga0105243_10005236 Ga0105243_100052367 439
254 3300009148 Ga0105243_10009992 Ga0105243_100099922 439
255 3300009174 Ga0105241_10106172 Ga0105241_101061722 439
256 3300009176 Ga0105242_10072632 Ga0105242_100726322 439
257 3300009176 Ga0105242_10154173 Ga0105242_101541732 439
258 3300009177 Ga0105248_10002516 Ga0105248_100025163 439
259 3300009177 Ga0105248_10019190 Ga0105248_100191905 439
260 3300009545 Ga0105237_10001294 Ga0105237_1000129426 439
261 3300009545 Ga0105237_10021252 Ga0105237_100212524 439
262 3300009551 Ga0105238_10038762 Ga0105238_100387624 439
263 3300009553 Ga0105249_10002142 Ga0105249_1000214211 439
264 3300009553 Ga0105249_10010527 Ga0105249_100105274 439
265 3300009553 Ga0105249_10017048 Ga0105249_100170486 439
266 3300009553 Ga0105249_10024528 Ga0105249_100245282 439
267 3300009553 Ga0105249_10080135 Ga0105249_100801352 439
268 3300010375 Ga0105239_10030142 Ga0105239_100301425 439
269 3300010375 Ga0105239_10049499 Ga0105239_100494993 439
270 3300013100 Ga0157373_10046461 Ga0157373_100464612 439
271 3300013297 Ga0157378_10000184 Ga0157378_1000018421 439
272 3300013297 Ga0157378_10002942 Ga0157378_1000294215 439
273 3300013297 Ga0157378_10024243 Ga0157378_100242434 439
274 3300013297 Ga0157378_10032603 Ga0157378_100326034 439
275 3300013297 Ga0157378_10052100 Ga0157378_100521003 439
276 3300013306 Ga0163162_10000023 Ga0163162_10000023141 439
277 3300013306 Ga0163162_10003725 Ga0163162_1000372516 439
278 3300013306 Ga0163162_10008009 Ga0163162_1000800910 439
279 3300013306 Ga0163162_10017551 Ga0163162_100175515 439
280 3300013306 Ga0163162_10086117 Ga0163162_100861172 439
281 3300013306 Ga0163162_10088315 Ga0163162_100883152 439
282 3300013306 Ga0163162_10228371 Ga0163162_102283712 439
283 3300013307 Ga0157372_10053602 Ga0157372_100536022 439
284 3300013307 Ga0157372_10149969 Ga0157372_101499692 439
285 3300013308 Ga0157375_10010020 Ga0157375_100100207 439
286 3300013308 Ga0157375_10187903 Ga0157375_101879032 439
287 3300013308 Ga0157375_10372142 Ga0157375_103721422 439
288 3300014325 Ga0163163_10003486 Ga0163163_1000348612 439
289 3300014325 Ga0163163_10022541 Ga0163163_100225415 439
290 3300014325 Ga0163163_10030835 Ga0163163_100308354 439
291 3300014325 Ga0163163_10135880 Ga0163163_101358802 439
292 3300014326 Ga0157380_10002737 Ga0157380_100027378 439
293 3300014326 Ga0157380_10004230 Ga0157380_100042304 439
294 3300014326 Ga0157380_10038663 Ga0157380_100386632 439
295 3300014745 Ga0157377_10003647 Ga0157377_100036473 439
296 3300014969 Ga0157376_10036929 Ga0157376_100369292 439
297 3300017792 Ga0163161_10003066 Ga0163161_100030669 439
298 3300025321 Ga0207656_10004005 Ga0207656_100040053 439
299 3300025885 Ga0207653_10000545 Ga0207653_1000054510 439
300 3300025885 Ga0207653_10017778 Ga0207653_100177781 439
301 3300025899 Ga0207642_10024236 Ga0207642_100242362 439
302 3300025900 Ga0207710_10000001 Ga0207710_10000001934 439
303 3300025904 Ga0207647_10015356 Ga0207647_100153564 439
304 3300025910 Ga0207684_10000117 Ga0207684_10000117101 439
305 3300025910 Ga0207684_10026892 Ga0207684_100268922 439
306 3300025910 Ga0207684_10038330 Ga0207684_100383304 439
307 3300025912 Ga0207707_10000013 Ga0207707_10000013128 439
308 3300025912 Ga0207707_10021089 Ga0207707_100210892 439
309 3300025914 Ga0207671_10001043 Ga0207671_1000104313 439
310 3300025917 Ga0207660_10005991 Ga0207660_100059913 439
311 3300025917 Ga0207660_10121814 Ga0207660_101218142 439
312 3300025920 Ga0207649_10034099 Ga0207649_100340993 439
313 3300025921 Ga0207652_10000071 Ga0207652_1000007147 439
314 3300025921 Ga0207652_10010867 Ga0207652_100108672 439
315 3300025922 Ga0207646_10038094 Ga0207646_100380944 439
316 3300025923 Ga0207681_10004215 Ga0207681_100042156 439
317 3300025924 Ga0207694_10164991 Ga0207694_101649912 439
318 3300025925 Ga0207650_10000017 Ga0207650_10000017259 439
319 3300025925 Ga0207650_10000890 Ga0207650_1000089012 439
320 3300025926 Ga0207659_10036860 Ga0207659_100368602 439
321 3300025932 Ga0207690_10042478 Ga0207690_100424782 439
322 3300025933 Ga0207706_10113193 Ga0207706_101131932 439
323 3300025935 Ga0207709_10017359 Ga0207709_100173591 439
324 3300025936 Ga0207670_10059344 Ga0207670_100593443 439
325 3300025936 Ga0207670_10095723 Ga0207670_100957232 439
326 3300025939 Ga0207665_10085121 Ga0207665_100851212 439
327 3300025940 Ga0207691_10007074 Ga0207691_100070749 439
328 3300025940 Ga0207691_10083089 Ga0207691_100830892 439
329 3300025941 Ga0207711_10010258 Ga0207711_100102587 439
330 3300025942 Ga0207689_10013037 Ga0207689_100130374 439
331 3300025942 Ga0207689_10021221 Ga0207689_100212215 439
332 3300025945 Ga0207679_10194754 Ga0207679_101947541 439
333 3300025960 Ga0207651_10000827 Ga0207651_1000082710 439
334 3300025960 Ga0207651_10044759 Ga0207651_100447592 439
335 3300025960 Ga0207651_10071103 Ga0207651_100711033 439
336 3300025961 Ga0207712_10000785 Ga0207712_1000078516 439
337 3300025961 Ga0207712_10013056 Ga0207712_100130564 439
338 3300025986 Ga0207658_10047868 Ga0207658_100478683 439
339 3300026023 Ga0207677_10104958 Ga0207677_101049582 439
340 3300026035 Ga0207703_10000080 Ga0207703_1000008089 439
341 3300026035 Ga0207703_10014690 Ga0207703_100146906 439
342 3300026035 Ga0207703_10213541 Ga0207703_102135412 439
343 3300026035 Ga0207703_10241654 Ga0207703_102416542 439
344 3300026041 Ga0207639_10011950 Ga0207639_100119505 439
345 3300026041 Ga0207639_10128674 Ga0207639_101286742 439
346 3300026075 Ga0207708_10029986 Ga0207708_100299865 439
347 3300026075 Ga0207708_10050534 Ga0207708_100505343 439
348 3300026078 Ga0207702_10007198 Ga0207702_100071989 439
349 3300026089 Ga0207648_10008116 Ga0207648_1000811610 439
350 3300026089 Ga0207648_10125303 Ga0207648_101253032 439
351 3300026089 Ga0207648_10148664 Ga0207648_101486642 439
352 3300026095 Ga0207676_10017817 Ga0207676_100178176 439
353 3300026095 Ga0207676_10054253 Ga0207676_100542533 439
354 3300026116 Ga0207674_10000136 Ga0207674_100001362 439
355 3300026116 Ga0207674_10028353 Ga0207674_100283535 439
356 3300026116 Ga0207674_10057884 Ga0207674_100578844 439
357 3300026118 Ga0207675_100001706 Ga0207675_1000017068 439
358 3300026118 Ga0207675_100004788 Ga0207675_10000478813 439
359 3300026118 Ga0207675_100011058 Ga0207675_1000110582 439
360 3300026118 Ga0207675_100114227 Ga0207675_1001142272 439
361 3300027907 Ga0207428_10002259 Ga0207428_1000225915 439
362 3300027907 Ga0207428_10014377 Ga0207428_100143779 439
363 3300028381 Ga0268264_10056203 Ga0268264_100562033 439
364 3300028381 Ga0268264_10068897 Ga0268264_100688974 439
365 3300028381 Ga0268264_10081130 Ga0268264_100811302 439
366 3300028381 Ga0268264_10170318 Ga0268264_101703182 439
367 3300031901 Ga0307406_10085343 Ga0307406_100853432 439
368 3300031995 Ga0307409_100299622 Ga0307409_1002996222 439
369 3300032126 Ga0307415_100091241 Ga0307415_1000912412 439
370 3300036401 Ga0373937_0064588 Ga0373937_0064588_1532_2854 439
371 3300044673 Ga0453683_0024837 Ga0453683_0024837_2409_3728 439
372 3300045051 Ga0451576_0036810 Ga0451576_0036810_1288_2610 439
373 3300045051 Ga0451576_0078582 Ga0451576_0078582_529_1848 439
374 3300046525 Ga0495663_0000171 Ga0495663_0000171_23048_24412 439
375 3300046537 Ga0495598_0000567 Ga0495598_0000567_1095_2417 439
376 3300046539 Ga0495621_0000156 Ga0495621_0000156_592_1914 439
377 3300046539 Ga0495621_0003016 Ga0495621_0003016_132_1496 439
378 3300046683 Ga0495658_0034036 Ga0495658_0034036_1341_2663 439
379 3300048905 Ga0496102_0022184 Ga0496102_0022184_3246_4565 439
380 3300048907 Ga0496104_0065244 Ga0496104_0065244_319_1638 439
381 3300048909 Ga0496106_0000853 Ga0496106_0000853_7393_8712 439
382 3300048913 Ga0496110_0205500 Ga0496110_0205500_38_1357 439
383 3300048916 Ga0496113_0151079 Ga0496113_0151079_75_1397 439
384 3300049520 Ga0501297_004557 Ga0501297_004557_83_1405 439
385 3300049521 Ga0501298_003901 Ga0501298_003901_191_1513 439
386 3300049574 Ga0501038_0006816 Ga0501038_0006816_8064_9386 439
387 3300049654 Ga0501207_002079 Ga0501207_002079_680_2002 439
388 3300049663 Ga0501223_003650 Ga0501223_003650_966_2288 439
389 3300049668 Ga0501233_001402 Ga0501233_001402_1777_3099 439
390 3300049668 Ga0501233_007896 Ga0501233_007896_74_1396 439
391 3300049705 Ga0501225_0005763 Ga0501225_0005763_640_1962 439
392 3300049705 Ga0501225_0007309 Ga0501225_0007309_400_1722 439
393 3300049707 Ga0501234_001470 Ga0501234_001470_1126_2448 439
394 3300049741 Ga0501079_0044424 Ga0501079_0044424_2041_3363 439
395 3300050507 nmdc:mga05p37_110823_c1 nmdc:mga05p37_110823_c1_78_1400 439
396 3300050507 nmdc:mga05p37_5479_c1 nmdc:mga05p37_5479_c1_10890_12212 439
397 3300050507 nmdc:mga05p37_73582_c1 nmdc:mga05p37_73582_c1_2632_3951 439
398 3300050507 nmdc:mga05p37_89301_c1 nmdc:mga05p37_89301_c1_2055_3398 439
399 3300050508 nmdc:mga09592_34041_c1 nmdc:mga09592_34041_c1_2671_3993 439
400 3300050511 nmdc:mga08y16_16471_c1 nmdc:mga08y16_16471_c1_6025_7347 439
401 3300050511 nmdc:mga08y16_2220_c1 nmdc:mga08y16_2220_c1_6931_8253 439
402 3300050512 nmdc:mga0n895_131268_c1 nmdc:mga0n895_131268_c1_32_1354 439
403 3300050512 nmdc:mga0n895_57872_c1 nmdc:mga0n895_57872_c1_75_1397 439
404 3300050512 nmdc:mga0n895_95603_c1 nmdc:mga0n895_95603_c1_1642_2961 439
405 3300050514 nmdc:mga08x19_2538_c1 nmdc:mga08x19_2538_c1_4056_5378 439
406 3300050515 nmdc:mga0a205_112259_c1 nmdc:mga0a205_112259_c1_1062_2381 439
407 3300050515 nmdc:mga0a205_15522_c1 nmdc:mga0a205_15522_c1_644_1963 439
408 3300050515 nmdc:mga0a205_20531_c1 nmdc:mga0a205_20531_c1_1644_2963 439
409 3300050515 nmdc:mga0a205_31908_c1 nmdc:mga0a205_31908_c1_1541_2884 439

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00591

Glycos_transf_3

Glycosyl transferase family, a/b domain

75

309

0.98

PF02885

Glycos_trans_3N

Glycosyl transferase family, helical bundle domain

4

66

0.98

PF07831

PYNP_C

Pyrimidine nucleoside phosphorylase C-terminal domain

349

423

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ey3-assembly1.cif.gz_B x-ray structure of the thymidine phosphorylase from salmonella typhimurium in complex with cytidine and sulphate 0.949 3 439
5ey3-assembly1.cif.gz_B x-ray structure of the thymidine phosphorylase from salmonella typhimurium in complex with cytidine and sulphate 0.9427 3 439
1brw-assembly1.cif.gz_B the crystal structure of pyrimidine nucleoside phosphorylase in a closed conformation 0.9386 1 438
1brw-assembly1.cif.gz_B the crystal structure of pyrimidine nucleoside phosphorylase in a closed conformation 0.9365 1 438
1azy-assembly1.cif.gz_A structural and theoretical studies suggest domain movement produces an active conformation of thymidine phosphorylase 0.9361 1 439
ID Description Score Start End Superfamily
af_P9WFS1_8_72_1.20.970.10 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 1.004 4 66 1.20.970.10
2j0fB01 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 1.003 1 67 1.20.970.10
2wk6B01 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 1.002 2 67 1.20.970.10
2wk5A01 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.999 1 67 1.20.970.10
af_Q2FWC1_1_67_1.20.970.10 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.9985 1 67 1.20.970.10
ID Description Score Start End GO Terms
AF-A0A2V8RPK9-F1-model_v4 Pyrimidine nucleoside phosphorylase C-terminal domain-containing protein 0.9949 232 439 GO:0004645
GO:0005829
GO:0006206
GO:0006213
GO:0009032
AF-A0A2V8QW34-F1-model_v4 Pyrimidine-nucleoside phosphorylase 0.9888 174 326 GO:0004645
GO:0005829
GO:0006206
AF-A0A2V9N454-F1-model_v4 Thymidine phosphorylase 0.9873 1 437 GO:0004645
GO:0005829
GO:0006206
GO:0006213
GO:0016154
AF-A0A257AZC7-F1-model_v4 Thymidine phosphorylase 0.9839 1 425 GO:0004645
GO:0005829
GO:0006206
GO:0006213
GO:0009032
AF-A0A7Y4UIR5-F1-model_v4 Thymidine phosphorylase (EC 2.4.2.4) 0.9834 1 434 GO:0004645
GO:0005829
GO:0006206
GO:0006213
GO:0009032

Feature Viewer

pLDDT pTM Quality
93.03 0.91 High
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Predicted Structure (AlphaFold2)

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