F436116

General Info

Members Datasets Scaffolds Average Seq Length
406 288 298 897

Family's Representative Sequence

Representative Sequence 3300003756|Ga0055533_1000547|Ga0055533_10005477
Length 911
Sequence MTDLSSGSEQVRSLGVQRTEAADADPQETAEWLEALDAVVEHVGRERAQFLFDRLGSHAVSLGVESARTNVTPYRNTIAPEDQPRYPGNLELEERLAAALRWNALAMVVRANKAYGELGGHIASYASAADLFEVGFNHFFRASMPGAGEGTGDLVYFQPHSSPGVYARAYLEGFLSEDNLRHYRREIGGPGLCSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLANRGLALTEGRKVWGFFGDGEMDEPESTGALSLAAREGLDNLVFVINCNLQRLDGPVRSNGRIIDELEAHFVGAGWNVIKVIWGSDWDALFSRDHSGALLRAFANTVDGQFQTFSANDGAYNRERFFGQNPELAALAAQLSDEDIDRLRRGGHDVRKLHAAYAKALAHRGQPTVILAKTMKGFGMGTAGQGRMTTHQQKKLDFDDLKAFRDRFRLPLTDADVEQVKFYKPAEDSPEMQYLHARRAALGGYLPRRRRVASAGLIVPPMSSWSQFALDCNGREMSTTMALVRMLTALLKDAGLGPRVVPIVADEARTFGMANMFRQVGIYSPLGQLYEPEDLGSMLYYREDTQGQILEEGISEAGAVSSWIAAATSYSVHDLPMLPFYIYYSMFGFQRIGDLIWAAADQRARGFLIGATSGKTTLGGEGLQHQDGTSHLAASTIPNCRAYDPAFAYEVAVIVDEGMREMVERQRDVFYYVTVMNENYAQPCAPDGDVAAIREGILKGIYPLATGAEKGAPAQIQLLGAGAILGEVIAAQRMLKDDWQIDAAVWSVTSFSELQRDGMAAERLARYGDASSTVPYVARVLGESEGPIIAATDYVRAVPELIRAYVPRRYVTLGTDGFGRSDTREALREFFEVDRKAIVMAALKALKDEGVLEGHVLSDARRRYYGDAPVQAASWER

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
3 2511231018 Pseudomonas sp. GM60 Isolate Nodule
4 2511231019 Pseudomonas sp. GM67 Isolate Nodule
5 2511231022 Pseudomonas sp. GM79 Isolate Nodule
6 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
7 2511231156 Pseudomonas ogarae F113 Isolate Rhizosphere
8 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
9 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
10 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
11 2597489889 Pseudomonas synxantha BG33R Isolate Rhizosphere
12 2599185167 Pseudomonas sp. NFPP28 Isolate Rhizoplane
13 2599185179 Pseudomonas sp. NFR09 Isolate Rhizoplane
14 2599185188 Pseudomonas sp. NFACC45 Isolate Rhizoplane
15 2599185190 Pseudomonas sp. NFPP04 Isolate Rhizoplane
16 2599185191 Pseudomonas sp. NFPP24 Isolate Rhizoplane
17 2599185212 Pseudomonas sp. NFACC15-1 Isolate Rhizoplane
18 2599185248 Pseudomonas sp. NFACC08-1 Isolate Rhizoplane
19 2599185288 Pseudomonas sp. NFACC25 Isolate Rhizoplane
20 2599185289 Pseudomonas sp. NFACC51 Isolate Rhizoplane
21 2599185290 Pseudomonas sp. NFPP11 Isolate Rhizoplane
22 2599185291 Pseudomonas sp. NFACC48-1 Isolate Rhizoplane
23 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
24 2599185300 Pseudomonas sp. NFACC39-1 Isolate Rhizoplane
25 2599185302 Pseudomonas sp. NFACC43 Isolate Rhizoplane
26 2599185303 Pseudomonas sp. NFACC42-2 Isolate Rhizoplane
27 2599185304 Pseudomonas sp. NFACC47-1 Isolate Rhizoplane
28 2599185305 Pseudomonas sp. NFACC07-1 Isolate Rhizoplane
29 2599185306 Pseudomonas sp. NFACC16-2 Isolate Rhizoplane
30 2599185307 Pseudomonas sp. NFACC02 Isolate Rhizoplane
31 2599185308 Pseudomonas sp. NFACC17-2 Isolate Rhizoplane
32 2599185309 Pseudomonas sp. NFACC49-2 Isolate Rhizoplane
33 2599185310 Pseudomonas sp. NFACC09-4 Isolate Rhizoplane
34 2599185311 Pseudomonas sp. NFACC04-2 Isolate Rhizoplane
35 2599185312 Pseudomonas sp. NFACC32-1 Isolate Rhizoplane
36 2599185313 Pseudomonas sp. NFACC05-1 Isolate Rhizoplane
37 2599185314 Pseudomonas sp. NFACC23-1 Isolate Rhizoplane
38 2599185315 Pseudomonas sp. NFACC44-2 Isolate Rhizoplane
39 2599185316 Pseudomonas sp. NFACC52 Isolate Rhizoplane
40 2599185318 Pseudomonas sp. NFACC13-1 Isolate Rhizoplane
41 2599185319 Pseudomonas sp. NFACC24-1 Isolate Rhizoplane
42 2599185320 Pseudomonas sp. NFACC36 Isolate Rhizoplane
43 2599185321 Pseudomonas sp. NFACC54 Isolate Rhizoplane
44 2599185322 Pseudomonas sp. NFACC14 Isolate Rhizoplane
45 2599185323 Pseudomonas sp. NFACC37-1 Isolate Rhizoplane
46 2599185324 Pseudomonas sp. NFACC46-3 Isolate Rhizoplane
47 2599185325 Pseudomonas sp. NFACC56-3 Isolate Rhizoplane
48 2600255283 Pseudomonas sp. NFR16 Isolate Rhizoplane
49 2619619299 Pseudomonas veronii R4 Genome sequencing Isolate Unclassified
50 2643221569 Achromobacter sp. Root565 Isolate Unclassified
51 2643221594 Achromobacter sp. Root170 Isolate Unclassified
52 2643221621 Achromobacter sp. Root83 Isolate Unclassified
53 2643221650 Pseudomonas sp. Root401 Isolate Unclassified
54 2643221660 Methylibium sp. Root1272 Isolate Unclassified
55 2667528170 Pseudomonas sp. NFACC50-1 Isolate Rhizoplane
56 2667528176 Pseudomonas sp. NFACC11-2 Isolate Rhizoplane
57 2675903420 Pseudomonas fluorescens Ps006 Isolate Unclassified
58 2675903515 Pseudomonas thivervalensis DSM 13194 Isolate Unclassified
59 2738541265 Pseudomonas sp. GV077 Isolate Unclassified
60 2738541282 Pseudomonas sp. GV058 Isolate Unclassified
61 2738541294 Pseudomonas sp. GV087 Isolate Unclassified
62 2738541303 Pseudomonas sp. GV105 Isolate Unclassified
63 2738541309 Pseudomonas sp. GV047 Isolate Unclassified
64 2744054620 Pseudomonas thivervalensis LMG 21626 Isolate Unclassified
65 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
66 2808606382 Pseudomonas sp. SJZ080 Isolate Rhizosphere
67 2808606385 Pseudomonas sp. SJZ103 Isolate Rhizosphere
68 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
69 2808606388 Pseudomonas sp. SJZ094 Isolate Rhizosphere
70 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
71 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
72 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
73 2816332298 Pseudomonas veronii R02 Isolate Rhizosphere
74 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
75 2818991450 Burkholderia sp. 604 Isolate Unclassified
76 2825651385 Pseudomonas brassicacearum L13-6-12 Isolate Rhizosphere
77 2834028612 Pseudomonas fluorescens 513 Isolate Unclassified
78 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
79 2852612431 Pseudomonas sp. SJZ073 Isolate Rhizosphere
80 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
81 2852667396 Pseudomonas sp. JAI120 Isolate Rhizosphere
82 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
83 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
84 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
85 2858950400 Achromobacter sp. K91 Isolate Unclassified
86 2860867994 Pseudomonas sp. R1-43-08 Isolate Rhizosphere
87 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
88 2904483920 Paraburkholderia caledonica 575 Isolate Unclassified
89 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
90 2904564687 Burkholderia sp. 571 Isolate Unclassified
91 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
92 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
93 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
94 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
95 2908446538 Pseudomonas sp. R76 Isolate Rhizosphere
96 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
97 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
98 2919481497 Pseudomonas brassicacearum 3432 Isolate Unclassified
99 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
100 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
101 2923586266 Pseudomonas fluorescens 1550 Isolate Rhizosphere
102 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
103 2928536128 Burkholderia sola 565 Isolate Unclassified
104 2931369376 Pseudomonas fluorescens DR133 Isolate Rhizosphere
105 2931390751 Pseudomonas sp. DR208 Isolate Rhizosphere
106 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
107 2941479691
108 3007511990 Pseudomonas fluorescens G20-18 Isolate Rhizosphere
109 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
110 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
111 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
112 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
113 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
114 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
115 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
116 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
117 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
118 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
119 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
120 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
121 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
122 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
123 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
124 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
125 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
126 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
127 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
128 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
129 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
130 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
131 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
132 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
133 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
134 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
135 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
136 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
137 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
138 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
139 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
140 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
141 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
142 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
143 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
144 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
145 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
146 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
147 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
148 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
149 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
150 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
151 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
152 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
153 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
154 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
155 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
156 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
157 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
158 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
159 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
160 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
161 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
162 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
163 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
164 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
165 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
166 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
167 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
168 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
169 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
170 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
171 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
172 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
173 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
174 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
175 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
176 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
177 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
178 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
179 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
180 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
181 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
182 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
183 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
184 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
185 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
186 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
187 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
188 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
189 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
190 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
191 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
192 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
193 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
194 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
195 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
196 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
197 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
198 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
199 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
200 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
201 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
202 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
203 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
204 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
205 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
206 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
207 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
208 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
209 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
210 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
211 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
212 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
213 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
214 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
215 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
216 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
217 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
218 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
219 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
220 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
221 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
222 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
223 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
224 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
225 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
226 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
227 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
228 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
229 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
230 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
231 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
232 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
233 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
234 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
235 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
236 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
237 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
238 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
239 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
240 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
241 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
242 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
243 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
244 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
245 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
246 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
247 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
248 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
249 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
250 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
251 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
252 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
253 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
254 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
255 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
256 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
257 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
258 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
259 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
260 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
261 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
262 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
263 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
264 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
265 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
266 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
267 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
268 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
269 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
270 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
271 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
272 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
273 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
274 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
275 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
276 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
277 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
278 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
279 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
280 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
281 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
282 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
283 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
284 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
285 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
286 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
287 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
288 8055817908 Pseudomonas pergaminensis 1008 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.4
Metatranscriptomes 0
Isolates 26.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.3
Nodule 0.99
Rhizoplane 9.61
Rhizosphere 58.87
Stem 0
Stem Tuber 0
Unclassified 17.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1169502 2162886007 Bacteria 8029
2 JGI25165J46597_1000867 3300003214 Bacteria 21647
3 Ga0055538_1000062 3300003751 Bacteria 105260
4 Ga0055539_1000093 3300003752 Bacteria 105260
5 Ga0055533_1000105 3300003756 Bacteria 105260
6 Ga0055533_1000547 3300003756 Bacteria 13389
7 Ga0055532_1000022 3300003758 Bacteria 248737
8 Ga0055525_1000137 3300003759 Bacteria 105260
9 Ga0055527_1000016 3300003760 Bacteria 248736
10 Ga0055535_1000017 3300003761 Bacteria 248735
11 Ga0055535_1000044 3300003761 Bacteria 145183
12 Ga0055542_1000030 3300003762 Bacteria 248717
13 Ga0055529_1000033 3300003763 Bacteria 248734
14 Ga0055529_1000198 3300003763 Bacteria 81554
15 Ga0055530_10000229 3300003791 Bacteria 50063
16 Ga0055540_1000240 3300003792 Bacteria 50063
17 Ga0055541_1000063 3300003841 Bacteria 105260
18 Ga0065714_10005756 3300005288 Bacteria 7057
19 Ga0065714_10064726 3300005288 Bacteria 20956
20 Ga0065704_10001000 3300005289 Bacteria 20119
21 Ga0070676_10006219 3300005328 Bacteria 6378
22 Ga0070670_100070819 3300005331 Bacteria 2993
23 Ga0068868_100009877 3300005338 Bacteria 6892
24 Ga0070661_100005856 3300005344 Bacteria 8451
25 Ga0070661_100047583 3300005344 Bacteria 3139
26 Ga0070668_100010558 3300005347 Bacteria 6869
27 Ga0070669_100032036 3300005353 Bacteria 3797
28 Ga0070671_100025504 3300005355 Bacteria 4851
29 Ga0068855_100000165 3300005563 Bacteria 85018
30 Ga0070664_100003455 3300005564 Bacteria 12764
31 Ga0070664_100008194 3300005564 Bacteria 8451
32 Ga0068864_100026545 3300005618 Bacteria 4884
33 Ga0068866_10001428 3300005718 Bacteria 10251
34 Ga0068851_10015418 3300005834 Bacteria 3641
35 Ga0068863_100015983 3300005841 Bacteria 7198
36 Ga0068860_100013882 3300005843 Bacteria 7898
37 Ga0075364_10002569 3300006051 Bacteria 10172
38 Ga0075364_10008401 3300006051 Bacteria 6171
39 Ga0075366_10000538 3300006195 Bacteria 17632
40 Ga0075366_10002530 3300006195 Bacteria 9397
41 Ga0075366_10025212 3300006195 Bacteria 3472
42 Ga0075370_10000421 3300006353 Bacteria 15685
43 Ga0105251_10001179 3300009011 Bacteria 22650
44 Ga0105251_10002267 3300009011 Bacteria 15276
45 Ga0105251_10006021 3300009011 Bacteria 7819
46 Ga0105251_10007673 3300009011 Bacteria 6601
47 Ga0105244_10005690 3300009036 Bacteria 8227
48 Ga0105244_10006165 3300009036 Bacteria 7821
49 Ga0105244_10015615 3300009036 Bacteria 4350
50 Ga0105237_10014204 3300009545 Bacteria 8338
51 Ga0105239_10002934 3300010375 Bacteria 21284
52 Ga0157373_10007278 3300013100 Bacteria 8249
53 Ga0157373_10012617 3300013100 Bacteria 6212
54 Ga0157373_10016261 3300013100 Bacteria 5430
55 Ga0157373_10020406 3300013100 Bacteria 4816
56 Ga0157371_10021954 3300013102 Bacteria 4685
57 Ga0157371_10029938 3300013102 Bacteria 3930
58 Ga0157369_10011491 3300013105 Bacteria 10055
59 Ga0157369_10041782 3300013105 Bacteria 5003
60 Ga0157378_10002519 3300013297 Bacteria 16299
61 Ga0163162_10020974 3300013306 Bacteria 6427
62 Ga0157375_10010699 3300013308 Bacteria 8083
63 Ga0157375_10012693 3300013308 Bacteria 7479
64 Ga0182008_10005828 3300014497 Bacteria 6963
65 Ga0182008_10012136 3300014497 Bacteria 4556
66 Ga0182006_1001633 3300015261 Bacteria 13236
67 Ga0182007_10000240 3300015262 Bacteria 37021
68 Ga0182007_10003098 3300015262 Bacteria 8002
69 Ga0163161_10018441 3300017792 Bacteria 4890
70 Ga0213872_10002479 3300021361 Bacteria 10816
71 Ga0209784_100021 3300025224 Bacteria 408534
72 Ga0209566_100119 3300025225 Bacteria 105312
73 Ga0209674_100017 3300025226 Bacteria 689087
74 Ga0209674_100036 3300025226 Bacteria 408534
75 Ga0209672_100001 3300025228 Bacteria 2828210
76 Ga0209147_100022 3300025229 Bacteria 443906
77 Ga0209563_100040 3300025230 Bacteria 408534
78 Ga0209563_100305 3300025230 Bacteria 19727
79 Ga0209258_100033 3300025242 Bacteria 443845
80 Ga0209258_100044 3300025242 Bacteria 376336
81 Ga0209677_100023 3300025253 Bacteria 408534
82 Ga0209148_1000046 3300025254 Bacteria 443881
83 Ga0209759_1000231 3300025256 Bacteria 83320
84 Ga0209759_1000645 3300025256 Bacteria 32507
85 Ga0209455_1000038 3300025272 Bacteria 443899
86 Ga0209455_1000048 3300025272 Bacteria 376260
87 Ga0209455_1000981 3300025272 Bacteria 14435
88 Ga0209025_1010889 3300025294 Bacteria 6091
89 Ga0209050_1000287 3300025298 Bacteria 106507
90 Ga0209256_1000699 3300025299 Bacteria 44604
91 Ga0209051_1000199 3300025303 Bacteria 106517
92 Ga0209051_1006668 3300025303 Bacteria 6459
93 Ga0207656_10007896 3300025321 Bacteria 3897
94 Ga0207696_1000041 3300025711 Bacteria 311695
95 Ga0207655_1000059 3300025728 Bacteria 265297
96 Ga0207655_1000191 3300025728 Bacteria 108382
97 Ga0207655_1001815 3300025728 Bacteria 18458
98 Ga0207713_1000078 3300025735 Bacteria 175087
99 Ga0207713_1002877 3300025735 Bacteria 12078
100 Ga0207713_1008918 3300025735 Bacteria 5709
101 Ga0207713_1012497 3300025735 Bacteria 4531
102 Ga0207643_10002970 3300025908 Bacteria 9147
103 Ga0207684_10024241 3300025910 Bacteria 5175
104 Ga0207695_10005592 3300025913 Bacteria 16601
105 Ga0207695_10006458 3300025913 Bacteria 15219
106 Ga0207671_10000165 3300025914 Bacteria 103178
107 Ga0207671_10014356 3300025914 Bacteria 6265
108 Ga0207671_10025099 3300025914 Bacteria 4478
109 Ga0207649_10004814 3300025920 Bacteria 7299
110 Ga0207649_10032565 3300025920 Bacteria 3109
111 Ga0207681_10025152 3300025923 Bacteria 3827
112 Ga0207694_10000111 3300025924 Bacteria 85677
113 Ga0207659_10015510 3300025926 Bacteria 4939
114 Ga0207644_10032612 3300025931 Bacteria 3635
115 Ga0207704_10027603 3300025938 Bacteria 3136
116 Ga0207679_10000036 3300025945 Bacteria 133834
117 Ga0207679_10004300 3300025945 Bacteria 8857
118 Ga0207667_10000102 3300025949 Bacteria 137469
119 Ga0207677_10009256 3300026023 Bacteria 5534
120 Ga0207678_10004586 3300026067 Bacteria 12423
121 Ga0207648_10000190 3300026089 Bacteria 64762
122 Ga0207676_10043769 3300026095 Bacteria 3449
123 Ga0207675_100000193 3300026118 Bacteria 55695
124 Ga0307515_10015728 3300028794 Bacteria 13920
125 Ga0268256_1000892 3300030500 Bacteria 20615
126 Ga0307513_10037879 3300031456 Bacteria 5361
127 Ga0307516_10002257 3300031730 Bacteria 26000
128 Ga0307405_10003786 3300031731 Bacteria 7028
129 Ga0307412_10000318 3300031911 Bacteria 30317
130 Ga0307412_10000646 3300031911 Bacteria 20240
131 Ga0395899_0008565 3300037312 Bacteria 7878
132 Ga0395905_0001257 3300037471 Bacteria 31335
133 Ga0395905_0012566 3300037471 Bacteria 8144
134 Ga0395905_0027595 3300037471 Bacteria 5353
135 Ga0395901_0012056 3300038443 Bacteria 8769
136 Ga0436361_0335516 3300039447 Bacteria 4572
137 Ga0439438_000302 3300041405 Bacteria 22118
138 Ga0439447_002706 3300041407 Bacteria 6416
139 Ga0439466_0001093 3300041411 Bacteria 10530
140 Ga0439452_000773 3300042010 Bacteria 15258
141 Ga0439463_000029 3300042016 Bacteria 31066
142 Ga0450898_000945 3300042134 Bacteria 3654
143 Ga0495617_000231 3300046452 Bacteria 33929
144 Ga0495617_003028 3300046452 Bacteria 6404
145 Ga0495590_0000280 3300046457 Bacteria 27489
146 Ga0495591_000755 3300046458 Bacteria 23371
147 Ga0495591_000782 3300046458 Bacteria 22655
148 Ga0495591_000994 3300046458 Bacteria 19269
149 Ga0495591_003673 3300046458 Bacteria 7802
150 Ga0495638_0001624 3300046460 Bacteria 20011
151 Ga0495651_0002400 3300046462 Bacteria 14464
152 Ga0495653_0004648 3300046463 Bacteria 11106
153 Ga0495650_0000736 3300046471 Bacteria 41051
154 Ga0495650_0001218 3300046471 Bacteria 26948
155 Ga0495650_0013854 3300046471 Bacteria 4237
156 Ga0495605_0013872 3300046474 Bacteria 4427
157 Ga0495584_0000018 3300046491 Bacteria 142382
158 Ga0495584_0001503 3300046491 Bacteria 13876
159 Ga0495585_0002124 3300046492 Bacteria 14484
160 Ga0495585_0011300 3300046492 Bacteria 5286
161 Ga0495607_0000060 3300046501 Bacteria 108449
162 Ga0495607_0000394 3300046501 Bacteria 44392
163 Ga0495607_0000722 3300046501 Bacteria 31760
164 Ga0495607_0002299 3300046501 Bacteria 15703
165 Ga0495607_0005525 3300046501 Bacteria 9019
166 Ga0495607_0010058 3300046501 Bacteria 6371
167 Ga0495583_0000824 3300046506 Bacteria 37940
168 Ga0495583_0001678 3300046506 Bacteria 21415
169 Ga0495606_0001604 3300046507 Bacteria 29509
170 Ga0495606_0001980 3300046507 Bacteria 25255
171 Ga0495606_0002688 3300046507 Bacteria 20103
172 Ga0495606_0009637 3300046507 Bacteria 8135
173 Ga0495606_0012538 3300046507 Bacteria 6789
174 Ga0495608_0001403 3300046511 Bacteria 17129
175 Ga0495608_0002554 3300046511 Bacteria 13066
176 Ga0495610_0010178 3300046512 Bacteria 5869
177 Ga0495610_0016677 3300046512 Bacteria 4218
178 Ga0495610_0020000 3300046512 Bacteria 3730
179 Ga0495618_0006299 3300046514 Bacteria 7204
180 Ga0495620_0000232 3300046515 Bacteria 41649
181 Ga0495620_0001314 3300046515 Bacteria 15093
182 Ga0495620_0011479 3300046515 Bacteria 4620
183 Ga0495620_0020362 3300046515 Bacteria 3241
184 Ga0495628_0000474 3300046516 Bacteria 36662
185 Ga0495632_0002308 3300046519 Bacteria 14681
186 Ga0495632_0003193 3300046519 Bacteria 11806
187 Ga0495632_0014871 3300046519 Bacteria 4386
188 Ga0495637_0000385 3300046520 Bacteria 32960
189 Ga0495637_0002292 3300046520 Bacteria 10604
190 Ga0495643_0024809 3300046522 Bacteria 3398
191 Ga0495648_0000461 3300046524 Bacteria 44058
192 Ga0495648_0007114 3300046524 Bacteria 9007
193 Ga0495642_0000082 3300046528 Bacteria 55424
194 Ga0495642_0001189 3300046528 Bacteria 11966
195 Ga0495652_0002709 3300046529 Bacteria 17989
196 Ga0495654_0000569 3300046530 Bacteria 29652
197 Ga0495654_0005997 3300046530 Bacteria 6978
198 Ga0495609_0000316 3300046538 Bacteria 43165
199 Ga0495609_0000467 3300046538 Bacteria 32669
200 Ga0495597_0001187 3300046542 Bacteria 19520
201 Ga0495645_0030891 3300046543 Bacteria 3902
202 Ga0495645_0052482 3300046543 Bacteria 2966
203 Ga0495633_0001408 3300046558 Bacteria 18752
204 Ga0495656_0000998 3300046615 Bacteria 9132
205 Ga0495611_0000712 3300046648 Bacteria 18807
206 Ga0495625_0001076 3300046660 Bacteria 35443
207 Ga0495625_0001712 3300046660 Bacteria 25517
208 Ga0495625_0010177 3300046660 Bacteria 7807
209 Ga0495635_0011041 3300046663 Bacteria 6333
210 Ga0495661_0000085 3300046665 Bacteria 114501
211 Ga0495661_0000460 3300046665 Bacteria 43215
212 Ga0495661_0000464 3300046665 Bacteria 42993
213 Ga0495661_0002362 3300046665 Bacteria 14565
214 Ga0495623_0001097 3300046679 Bacteria 18292
215 Ga0495646_0002669 3300046680 Bacteria 11037
216 Ga0495646_0006424 3300046680 Bacteria 7452
217 Ga0495669_0000895 3300046684 Bacteria 12544
218 Ga0495649_0001293 3300046694 Bacteria 19127
219 Ga0495649_0003952 3300046694 Bacteria 9795
220 Ga0495589_0000503 3300046794 Bacteria 27673
221 Ga0495589_0001677 3300046794 Bacteria 12679
222 Ga0495589_0005352 3300046794 Bacteria 6771
223 Ga0495589_0005960 3300046794 Bacteria 6434
224 Ga0495600_0003528 3300046809 Bacteria 9200
225 Ga0495660_0001910 3300046810 Bacteria 13610
226 Ga0495660_0002629 3300046810 Bacteria 11414
227 Ga0495581_0001374 3300047315 Bacteria 13471
228 Ga0495672_0001044 3300047320 Bacteria 28339
229 Ga0495672_0001525 3300047320 Bacteria 22674
230 Ga0495676_0000247 3300047321 Bacteria 43434
231 Ga0495680_0023698 3300047322 Bacteria 5099
232 Ga0495683_0011631 3300047323 Bacteria 4631
233 Ga0495687_001541 3300047443 Bacteria 20940
234 Ga0495675_0007149 3300047444 Bacteria 6872
235 Ga0495677_0000486 3300047445 Bacteria 16837
236 Ga0495679_000141 3300047446 Bacteria 64974
237 Ga0495685_004250 3300047447 Bacteria 4610
238 Ga0495673_0000922 3300047469 Bacteria 26684
239 Ga0495673_0001157 3300047469 Bacteria 22347
240 Ga0495673_0003016 3300047469 Bacteria 11340
241 Ga0495681_0000027 3300047470 Bacteria 141884
242 Ga0495681_0018677 3300047470 Bacteria 3811
243 Ga0495686_0000503 3300047472 Bacteria 57024
244 Ga0495686_0000641 3300047472 Bacteria 48207
245 Ga0495593_0002724 3300047673 Bacteria 10632
246 Ga0495614_0011205 3300048089 Bacteria 3945
247 Ga0495626_0000410 3300048091 Bacteria 43973
248 Ga0495626_0007218 3300048091 Bacteria 6208
249 Ga0495626_0011096 3300048091 Bacteria 4777
250 Ga0496117_0027758 3300048920 Bacteria 4400
251 Ga0496117_0046023 3300048920 Bacteria 3143
252 Ga0496118_0012864 3300048921 Bacteria 7977
253 Ga0496118_0021881 3300048921 Bacteria 5609
254 Ga0496118_0028497 3300048921 Bacteria 4701
255 Ga0496118_0038261 3300048921 Bacteria 3847
256 Ga0496118_0051710 3300048921 Bacteria 3140
257 Ga0496119_0020822 3300048922 Bacteria 4764
258 Ga0496119_0023509 3300048922 Bacteria 4366
259 Ga0496120_0009595 3300048923 Bacteria 6842
260 Ga0496120_0015956 3300048923 Bacteria 4929
261 Ga0496121_0000629 3300048924 Bacteria 65811
262 Ga0496121_0001153 3300048924 Bacteria 46318
263 Ga0496121_0014103 3300048924 Bacteria 8519
264 Ga0496121_0039850 3300048924 Bacteria 4131
265 Ga0496122_0001658 3300048925 Bacteria 34572
266 Ga0496122_0043420 3300048925 Bacteria 3523
267 Ga0496123_0000891 3300048926 Bacteria 47218
268 Ga0496123_0015658 3300048926 Bacteria 6205
269 Ga0496123_0027494 3300048926 Bacteria 4235
270 Ga0496124_0000004 3300048927 Bacteria 976131
271 Ga0496124_0000338 3300048927 Bacteria 85856
272 Ga0496124_0011812 3300048927 Bacteria 8699
273 Ga0496125_0000011 3300048928 Bacteria 655895
274 Ga0496125_0003893 3300048928 Bacteria 17632
275 Ga0496125_0004096 3300048928 Bacteria 17057
276 Ga0496125_0016535 3300048928 Bacteria 7079
277 Ga0496126_0032170 3300048929 Bacteria 4945
278 Ga0495678_001849 3300049459 Bacteria 15482
279 Ga0495682_0000437 3300049460 Bacteria 29044
280 Ga0495682_0002618 3300049460 Bacteria 8428
281 Ga0495682_0002700 3300049460 Bacteria 8241
282 Ga0501037_0028781 3300049573 Bacteria 4105
283 Ga0501047_0003482 3300049581 Bacteria 14877
284 Ga0501035_0001472 3300049822 Bacteria 24109
285 Ga0501044_0000048 3300049823 Bacteria 145067
286 Ga0501044_0004656 3300049823 Bacteria 15350
287 nmdc:mga03683_6530_c1 3300050489 Bacteria 3999
288 nmdc:mga00v17_3491_c1 3300050491 Bacteria 8137
289 nmdc:mga0k408_12025_c1 3300050493 Bacteria 4724
290 nmdc:mga0k408_549_c1 3300050493 Bacteria 20700
291 nmdc:mga0k408_8816_c1 3300050493 Bacteria 5429
292 nmdc:mga07m45_13866_c1 3300050496 Bacteria 4283
293 nmdc:mga07m45_1974_c1 3300050496 Bacteria 9501
294 nmdc:mga07m45_3721_c1 3300050496 Bacteria 7042
295 Ga0500618_000487 3300053125 Bacteria 25425
296 Ga0500618_001586 3300053125 Bacteria 9908
297 Ga0500559_0000038 3300053136 Bacteria 109922
298 Ga0500622_0010442 3300053156 Bacteria 5097

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046515 Ga0495620_0020362 Ga0495620_0020362_721_3207 828
2 3300046543 Ga0495645_0030891 Ga0495645_0030891_1284_3890 852
3 iso_pu_bacteria 2857542790 2857546147 860
4 3300046558 Ga0495633_0001408 Ga0495633_0001408_4579_7260 862
5 3300048927 Ga0496124_0000004 Ga0496124_0000004_627046_629664 862
6 iso_pu_bacteria 2932422444 2932423176 864
7 3300006195 Ga0075366_10025212 Ga0075366_100252122 868
8 3300046501 Ga0495607_0000394 Ga0495607_0000394_17319_20027 870
9 3300046665 Ga0495661_0000085 Ga0495661_0000085_71608_74316 870
10 3300046501 Ga0495607_0010058 Ga0495607_0010058_1814_4522 871
11 3300047469 Ga0495673_0000922 Ga0495673_0000922_6913_9621 871
12 3300046462 Ga0495651_0002400 Ga0495651_0002400_7010_9694 873
13 3300046511 Ga0495608_0001403 Ga0495608_0001403_4838_7522 873
14 3300046516 Ga0495628_0000474 Ga0495628_0000474_23357_26041 873
15 3300046529 Ga0495652_0002709 Ga0495652_0002709_4899_7583 873
16 3300053125 Ga0500618_001586 Ga0500618_001586_1065_3881 873
17 iso_pu_bacteria 2904564687 2904571302 873
18 iso_pu_bacteria 2904571731 2904578393 873
19 iso_pu_bacteria 2928536128 2928542278 873
20 3300025272 Ga0209455_1000981 Ga0209455_10009814 875
21 3300049823 Ga0501044_0000048 Ga0501044_0000048_138766_141414 875
22 3300053136 Ga0500559_0000038 Ga0500559_0000038_67045_69738 875
23 3300053156 Ga0500622_0010442 Ga0500622_0010442_1657_4350 875
24 3300005618 Ga0068864_100026545 Ga0068864_1000265454 876
25 3300005841 Ga0068863_100015983 Ga0068863_1000159834 876
26 3300026095 Ga0207676_10043769 Ga0207676_100437692 876
27 3300046680 Ga0495646_0002669 Ga0495646_0002669_7562_10267 877
28 3300015262 Ga0182007_10000240 Ga0182007_1000024026 878
29 3300025294 Ga0209025_1010889 Ga0209025_10108893 878
30 3300025299 Ga0209256_1000699 Ga0209256_100069915 878
31 3300025303 Ga0209051_1006668 Ga0209051_10066682 878
32 iso_pu_bacteria 2765235838 2765571152 879
33 iso_pu_bacteria 2808606386 2808982692 879
34 iso_pu_bacteria 2808606415 2809130193 879
35 iso_pu_bacteria 2808606419 2809150330 879
36 iso_pu_bacteria 2839094727 2839099061 879
37 iso_pu_bacteria 2852618963 2852621447 879
38 3300046458 Ga0495591_003673 Ga0495591_003673_4131_6773 880
39 3300046507 Ga0495606_0012538 Ga0495606_0012538_2786_5428 880
40 3300046515 Ga0495620_0011479 Ga0495620_0011479_1014_3656 880
41 3300046519 Ga0495632_0014871 Ga0495632_0014871_1044_3686 880
42 3300046665 Ga0495661_0000464 Ga0495661_0000464_39231_41873 880
43 3300046794 Ga0495589_0005352 Ga0495589_0005352_2635_5277 880
44 3300047470 Ga0495681_0018677 Ga0495681_0018677_78_2720 880
45 3300048924 Ga0496121_0039850 Ga0496121_0039850_687_3335 880
46 3300048928 Ga0496125_0004096 Ga0496125_0004096_9963_12605 880
47 iso_pu_bacteria 2511231026 2511386417 880
48 iso_pu_bacteria 2551306416 2553006945 880
49 iso_pu_bacteria 2818991449 2819618195 880
50 iso_pu_bacteria 2904439833 2904444487 880
51 iso_pu_bacteria 2904530477 2904535640 880
52 iso_pu_bacteria 2904584206 2904588211 880
53 iso_pu_bacteria 2904589729 2904595247 880
54 iso_pu_bacteria 2904601388 2904606159 880
55 iso_pu_bacteria 2919046199 2919049180 880
56 iso_pu_bacteria 2919079590 2919084357 880
57 iso_pu_bacteria 2923510766 2923513694 880
58 iso_pu_bacteria 2928130867 2928135200 880
59 iso_pu_bacteria 2511231003 2511248574 881
60 3300003751 Ga0055538_1000062 Ga0055538_100006215 882
61 3300003752 Ga0055539_1000093 Ga0055539_100009315 882
62 3300003756 Ga0055533_1000105 Ga0055533_100010515 882
63 3300003759 Ga0055525_1000137 Ga0055525_100013715 882
64 3300003841 Ga0055541_1000063 Ga0055541_100006315 882
65 3300010375 Ga0105239_10002934 Ga0105239_100029346 882
66 3300015261 Ga0182006_1001633 Ga0182006_10016335 882
67 3300021361 Ga0213872_10002479 Ga0213872_100024797 882
68 3300025224 Ga0209784_100021 Ga0209784_100021305 882
69 3300025225 Ga0209566_100119 Ga0209566_10011977 882
70 3300025226 Ga0209674_100036 Ga0209674_100036305 882
71 3300025230 Ga0209563_100040 Ga0209563_100040305 882
72 3300025253 Ga0209677_100023 Ga0209677_100023305 882
73 3300025913 Ga0207695_10005592 Ga0207695_1000559213 882
74 3300025913 Ga0207695_10006458 Ga0207695_1000645813 882
75 3300025914 Ga0207671_10014356 Ga0207671_100143565 882
76 3300025924 Ga0207694_10000111 Ga0207694_1000011118 882
77 3300037312 Ga0395899_0008565 Ga0395899_0008565_607_3288 882
78 3300038443 Ga0395901_0012056 Ga0395901_0012056_3829_6510 882
79 3300039447 Ga0436361_0335516 Ga0436361_0335516_1376_4051 882
80 3300053125 Ga0500618_000487 Ga0500618_000487_6816_9491 882
81 iso_pu_bacteria 2521172590 2521559915 882
82 3300005344 Ga0070661_100047583 Ga0070661_1000475832 883
83 3300005564 Ga0070664_100003455 Ga0070664_1000034553 883
84 3300015262 Ga0182007_10003098 Ga0182007_100030984 883
85 3300025920 Ga0207649_10032565 Ga0207649_100325651 883
86 3300025945 Ga0207679_10004300 Ga0207679_100043007 883
87 3300037471 Ga0395905_0012566 Ga0395905_0012566_3394_6072 883
88 iso_pu_bacteria 2599185292 2599903308 883
89 iso_pu_bacteria 2643221569 2643862190 883
90 iso_pu_bacteria 2643221594 2643980781 883
91 iso_pu_bacteria 2643221621 2644122204 883
92 iso_pu_bacteria 2808606395 2809031902 883
93 iso_pu_bacteria 2941479691 2941482024 883
94 3300005563 Ga0068855_100000165 Ga0068855_10000016562 884
95 3300025949 Ga0207667_10000102 Ga0207667_1000010264 884
96 3300037471 Ga0395905_0027595 Ga0395905_0027595_446_3142 884
97 3300046542 Ga0495597_0001187 Ga0495597_0001187_3275_5995 884
98 3300046794 Ga0495589_0000503 Ga0495589_0000503_1716_4436 884
99 3300048091 Ga0495626_0011096 Ga0495626_0011096_1666_4356 884
100 3300048925 Ga0496122_0043420 Ga0496122_0043420_774_3434 884
101 3300048926 Ga0496123_0015658 Ga0496123_0015658_971_3631 884
102 3300048928 Ga0496125_0003893 Ga0496125_0003893_13991_16651 884
103 3300050491 nmdc:mga00v17_3491_c1 nmdc:mga00v17_3491_c1_2273_4939 884
104 iso_pu_bacteria 2599185167 2599401787 884
105 iso_pu_bacteria 2599185179 2599454022 884
106 iso_pu_bacteria 2599185190 2599515596 884
107 iso_pu_bacteria 2599185191 2599521299 884
108 iso_pu_bacteria 2599185290 2599894975 884
109 iso_pu_bacteria 2834028612 2834030032 884
110 iso_pu_bacteria 2858950400 2858955647 884
111 iso_pu_bacteria 2931390751 2931394171 884
112 iso_pu_bacteria 8055817908 8055820627 884
113 3300005353 Ga0070669_100032036 Ga0070669_1000320363 886
114 3300005834 Ga0068851_10015418 Ga0068851_100154183 886
115 3300009011 Ga0105251_10007673 Ga0105251_100076734 886
116 3300013100 Ga0157373_10012617 Ga0157373_100126174 886
117 3300013100 Ga0157373_10020406 Ga0157373_100204062 886
118 3300013102 Ga0157371_10029938 Ga0157371_100299382 886
119 3300013105 Ga0157369_10041782 Ga0157369_100417823 886
120 3300014497 Ga0182008_10012136 Ga0182008_100121363 886
121 3300017792 Ga0163161_10018441 Ga0163161_100184413 886
122 3300025321 Ga0207656_10007896 Ga0207656_100078961 886
123 3300025735 Ga0207713_1012497 Ga0207713_10124973 886
124 3300025923 Ga0207681_10025152 Ga0207681_100251521 886
125 3300031911 Ga0307412_10000646 Ga0307412_100006469 886
126 3300046512 Ga0495610_0016677 Ga0495610_0016677_902_3568 886
127 3300048920 Ga0496117_0027758 Ga0496117_0027758_979_3732 886
128 3300048920 Ga0496117_0046023 Ga0496117_0046023_53_2719 886
129 3300048921 Ga0496118_0012864 Ga0496118_0012864_2529_5216 886
130 3300048921 Ga0496118_0051710 Ga0496118_0051710_52_2718 886
131 3300048922 Ga0496119_0020822 Ga0496119_0020822_829_3558 886
132 3300048923 Ga0496120_0015956 Ga0496120_0015956_985_3714 886
133 3300048924 Ga0496121_0000629 Ga0496121_0000629_27668_30355 886
134 3300048926 Ga0496123_0027494 Ga0496123_0027494_655_3384 886
135 3300048928 Ga0496125_0000011 Ga0496125_0000011_256086_258773 886
136 iso_pu_bacteria 2857537821 2857538389 886
137 iso_pu_bacteria 2643221660 2644338446 887
138 iso_pu_bacteria 2808606385 2808978370 887
139 iso_pu_bacteria 2808606388 2808994103 887
140 iso_pu_bacteria 2852612431 2852617604 887
141 iso_pu_bacteria 2852667396 2852672277 887
142 iso_pu_bacteria 2597489889 2597869991 888
143 iso_pu_bacteria 2599185288 2599881221 888
144 iso_pu_bacteria 2599185303 2599949491 888
145 iso_pu_bacteria 2675903420 2677900986 888
146 iso_pu_bacteria 2738541294 2738810359 888
147 iso_pu_bacteria 2738541309 2738897719 888
148 iso_pu_bacteria 2908446538 2908449996 888
149 3300006051 Ga0075364_10002569 Ga0075364_100025696 889
150 3300046460 Ga0495638_0001624 Ga0495638_0001624_1765_4434 889
151 iso_pu_bacteria 2818991450 2819622554 889
152 iso_pu_bacteria 2904483920 2904488203 889
153 iso_pu_bacteria 2919527303 2919531036 889
154 3300005344 Ga0070661_100005856 Ga0070661_1000058564 890
155 3300005564 Ga0070664_100008194 Ga0070664_1000081944 890
156 3300009011 Ga0105251_10006021 Ga0105251_100060216 890
157 3300009036 Ga0105244_10005690 Ga0105244_100056906 890
158 3300009036 Ga0105244_10015615 Ga0105244_100156152 890
159 3300009545 Ga0105237_10014204 Ga0105237_100142043 890
160 3300013100 Ga0157373_10007278 Ga0157373_100072786 890
161 3300013105 Ga0157369_10011491 Ga0157369_100114916 890
162 3300013308 Ga0157375_10010699 Ga0157375_100106995 890
163 3300013308 Ga0157375_10012693 Ga0157375_100126935 890
164 3300025711 Ga0207696_1000041 Ga0207696_100004131 890
165 3300025728 Ga0207655_1000191 Ga0207655_100019175 890
166 3300025735 Ga0207713_1002877 Ga0207713_100287711 890
167 3300025914 Ga0207671_10000165 Ga0207671_1000016595 890
168 3300025920 Ga0207649_10004814 Ga0207649_100048142 890
169 3300025945 Ga0207679_10000036 Ga0207679_100000366 890
170 3300031731 Ga0307405_10003786 Ga0307405_100037864 890
171 3300042134 Ga0450898_000945 Ga0450898_000945_451_3129 890
172 3300046506 Ga0495583_0000824 Ga0495583_0000824_31510_34188 890
173 3300046512 Ga0495610_0020000 Ga0495610_0020000_482_3160 890
174 3300046530 Ga0495654_0005997 Ga0495654_0005997_2720_5398 890
175 3300048921 Ga0496118_0021881 Ga0496118_0021881_183_2861 890
176 3300048921 Ga0496118_0028497 Ga0496118_0028497_1301_3979 890
177 3300048921 Ga0496118_0038261 Ga0496118_0038261_467_3247 890
178 3300048922 Ga0496119_0023509 Ga0496119_0023509_194_2872 890
179 3300048923 Ga0496120_0009595 Ga0496120_0009595_3124_5802 890
180 3300048927 Ga0496124_0000338 Ga0496124_0000338_73249_75927 890
181 3300048928 Ga0496125_0016535 Ga0496125_0016535_940_3705 890
182 iso_pu_bacteria 2857576091 2857577436 890
183 3300003214 JGI25165J46597_1000867 JGI25165J46597_10008673 891
184 3300003756 Ga0055533_1000547 Ga0055533_10005477 891
185 3300003758 Ga0055532_1000022 Ga0055532_100002271 891
186 3300003760 Ga0055527_1000016 Ga0055527_100001671 891
187 3300003761 Ga0055535_1000017 Ga0055535_100001771 891
188 3300003762 Ga0055542_1000030 Ga0055542_1000030167 891
189 3300003763 Ga0055529_1000033 Ga0055529_1000033167 891
190 3300025226 Ga0209674_100017 Ga0209674_100017316 891
191 3300025228 Ga0209672_100001 Ga0209672_1000012260 891
192 3300025229 Ga0209147_100022 Ga0209147_100022248 891
193 3300025230 Ga0209563_100305 Ga0209563_10030511 891
194 3300025242 Ga0209258_100033 Ga0209258_100033165 891
195 3300025254 Ga0209148_1000046 Ga0209148_1000046249 891
196 3300025256 Ga0209759_1000231 Ga0209759_10002317 891
197 3300025272 Ga0209455_1000038 Ga0209455_1000038249 891
198 3300028794 Ga0307515_10015728 Ga0307515_100157284 891
199 3300046452 Ga0495617_000231 Ga0495617_000231_24834_27542 891
200 3300046463 Ga0495653_0004648 Ga0495653_0004648_4352_7087 891
201 3300046511 Ga0495608_0002554 Ga0495608_0002554_466_3201 891
202 3300046514 Ga0495618_0006299 Ga0495618_0006299_3190_5925 891
203 3300046663 Ga0495635_0011041 Ga0495635_0011041_1770_4505 891
204 3300046679 Ga0495623_0001097 Ga0495623_0001097_13235_15970 891
205 3300046680 Ga0495646_0006424 Ga0495646_0006424_1575_4310 891
206 3300046809 Ga0495600_0003528 Ga0495600_0003528_6372_9107 891
207 3300047315 Ga0495581_0001374 Ga0495581_0001374_10267_13002 891
208 3300047322 Ga0495680_0023698 Ga0495680_0023698_467_3202 891
209 3300047323 Ga0495683_0011631 Ga0495683_0011631_969_3704 891
210 3300047444 Ga0495675_0007149 Ga0495675_0007149_2021_4756 891
211 3300047472 Ga0495686_0000503 Ga0495686_0000503_40610_43480 891
212 3300047673 Ga0495593_0002724 Ga0495593_0002724_2256_4991 891
213 3300048089 Ga0495614_0011205 Ga0495614_0011205_824_3559 891
214 iso_pu_bacteria 2585428062 2587758023 891
215 3300003761 Ga0055535_1000044 Ga0055535_10000445 892
216 3300003763 Ga0055529_1000198 Ga0055529_100019828 892
217 3300025242 Ga0209258_100044 Ga0209258_100044148 892
218 3300025256 Ga0209759_1000645 Ga0209759_100064524 892
219 3300025272 Ga0209455_1000048 Ga0209455_1000048148 892
220 3300047472 Ga0495686_0000641 Ga0495686_0000641_29159_31846 892
221 3300049573 Ga0501037_0028781 Ga0501037_0028781_1119_4016 892
222 3300049581 Ga0501047_0003482 Ga0501047_0003482_10782_13679 892
223 3300049822 Ga0501035_0001472 Ga0501035_0001472_92_2989 892
224 3300049823 Ga0501044_0004656 Ga0501044_0004656_10774_13671 892
225 iso_pu_bacteria 2619619299 2621299431 892
226 iso_pu_bacteria 2738541265 2738675074 892
227 iso_pu_bacteria 2738541282 2738753573 892
228 iso_pu_bacteria 2738541303 2738862485 892
229 iso_pu_bacteria 2816332298 2817490794 892
230 3300031456 Ga0307513_10037879 Ga0307513_100378793 893
231 3300031730 Ga0307516_10002257 Ga0307516_100022572 893
232 3300046524 Ga0495648_0000461 Ga0495648_0000461_18915_21623 893
233 3300046660 Ga0495625_0001712 Ga0495625_0001712_3097_5790 893
234 3300047443 Ga0495687_001541 Ga0495687_001541_6486_9194 893
235 3300049460 Ga0495682_0002700 Ga0495682_0002700_2207_4915 893
236 3300006195 Ga0075366_10000538 Ga0075366_1000053813 894
237 3300025914 Ga0207671_10025099 Ga0207671_100250992 894
238 3300026067 Ga0207678_10004586 Ga0207678_100045866 894
239 3300046501 Ga0495607_0000060 Ga0495607_0000060_76748_79438 894
240 3300046519 Ga0495632_0003193 Ga0495632_0003193_3013_5709 894
241 3300046660 Ga0495625_0010177 Ga0495625_0010177_5004_7718 894
242 3300046694 Ga0495649_0001293 Ga0495649_0001293_5305_8001 894
243 3300048929 Ga0496126_0032170 Ga0496126_0032170_1436_4198 894
244 3300050493 nmdc:mga0k408_12025_c1 nmdc:mga0k408_12025_c1_1109_3814 894
245 3300050493 nmdc:mga0k408_8816_c1 nmdc:mga0k408_8816_c1_475_3165 894
246 3300050496 nmdc:mga07m45_1974_c1 nmdc:mga07m45_1974_c1_4031_6721 894
247 3300050496 nmdc:mga07m45_3721_c1 nmdc:mga07m45_3721_c1_1699_4389 894
248 iso_pu_bacteria 2599185188 2599504834 894
249 iso_pu_bacteria 2599185212 2599614355 894
250 iso_pu_bacteria 2599185248 2599768670 894
251 iso_pu_bacteria 2599185289 2599884408 894
252 iso_pu_bacteria 2599185291 2599896413 894
253 iso_pu_bacteria 2599185300 2599930382 894
254 iso_pu_bacteria 2599185302 2599946012 894
255 iso_pu_bacteria 2599185304 2599957004 894
256 iso_pu_bacteria 2599185305 2599958307 894
257 iso_pu_bacteria 2599185306 2599964156 894
258 iso_pu_bacteria 2599185308 2599976362 894
259 iso_pu_bacteria 2599185309 2599986410 894
260 iso_pu_bacteria 2599185310 2599987547 894
261 iso_pu_bacteria 2599185311 2599992951 894
262 iso_pu_bacteria 2599185312 2600003071 894
263 iso_pu_bacteria 2599185313 2600003632 894
264 iso_pu_bacteria 2599185314 2600009871 894
265 iso_pu_bacteria 2599185315 2600016022 894
266 iso_pu_bacteria 2599185316 2600021773 894
267 iso_pu_bacteria 2599185318 2600036268 894
268 iso_pu_bacteria 2599185319 2600040932 894
269 iso_pu_bacteria 2599185320 2600045875 894
270 iso_pu_bacteria 2599185321 2600051228 894
271 iso_pu_bacteria 2599185322 2600059557 894
272 iso_pu_bacteria 2599185323 2600065728 894
273 iso_pu_bacteria 2599185324 2600069317 894
274 iso_pu_bacteria 2599185325 2600075046 894
275 iso_pu_bacteria 2667528170 2671089108 894
276 iso_pu_bacteria 2667528176 2671126855 894
277 iso_pu_bacteria 2919481497 2919482475 894
278 3300009011 Ga0105251_10001179 Ga0105251_1000117914 895
279 3300025728 Ga0207655_1001815 Ga0207655_100181516 895
280 3300025735 Ga0207713_1000078 Ga0207713_100007814 895
281 3300025910 Ga0207684_10024241 Ga0207684_100242413 895
282 3300046458 Ga0495591_000755 Ga0495591_000755_15835_18528 895
283 3300048924 Ga0496121_0014103 Ga0496121_0014103_1911_4604 895
284 3300048925 Ga0496122_0001658 Ga0496122_0001658_23339_26032 895
285 3300048926 Ga0496123_0000891 Ga0496123_0000891_31307_34000 895
286 iso_pu_bacteria 2511231018 2511340830 895
287 iso_pu_bacteria 2511231019 2511342013 895
288 iso_pu_bacteria 2643221650 2644280918 895
289 iso_pu_bacteria 2808606382 2808956568 895
290 iso_pu_bacteria 2825651385 2825652477 895
291 iso_pu_bacteria 2923586266 2923591532 895
292 iso_pu_bacteria 2931369376 2931371540 895
293 iso_pu_bacteria 3007511990 3007513873 895
294 3300006195 Ga0075366_10002530 Ga0075366_100025303 896
295 3300006353 Ga0075370_10000421 Ga0075370_100004219 896
296 3300025926 Ga0207659_10015510 Ga0207659_100155103 896
297 3300050493 nmdc:mga0k408_549_c1 nmdc:mga0k408_549_c1_6338_9037 896
298 3300050496 nmdc:mga07m45_13866_c1 nmdc:mga07m45_13866_c1_52_2751 896
299 iso_pu_bacteria 2675903515 2678263357 896
300 iso_pu_bacteria 2744054620 2745009688 896
301 3300005328 Ga0070676_10006219 Ga0070676_100062193 897
302 3300005331 Ga0070670_100070819 Ga0070670_1000708191 897
303 3300005338 Ga0068868_100009877 Ga0068868_1000098775 897
304 3300005347 Ga0070668_100010558 Ga0070668_1000105583 897
305 3300005355 Ga0070671_100025504 Ga0070671_1000255042 897
306 3300005718 Ga0068866_10001428 Ga0068866_100014283 897
307 3300005843 Ga0068860_100013882 Ga0068860_1000138823 897
308 3300013297 Ga0157378_10002519 Ga0157378_100025199 897
309 3300025908 Ga0207643_10002970 Ga0207643_100029705 897
310 3300025931 Ga0207644_10032612 Ga0207644_100326121 897
311 3300025938 Ga0207704_10027603 Ga0207704_100276032 897
312 3300026023 Ga0207677_10009256 Ga0207677_100092565 897
313 3300026089 Ga0207648_10000190 Ga0207648_1000019048 897
314 3300026118 Ga0207675_100000193 Ga0207675_10000019347 897
315 iso_pu_bacteria 2511231022 2511365507 897
316 iso_pu_bacteria 2511231156 2511825486 897
317 iso_pu_bacteria 2599185307 2599971860 897
318 iso_pu_bacteria 2600255283 2601626134 897
319 iso_pu_bacteria 2860867994 2860870477 897
320 3300030500 Ga0268256_1000892 Ga0268256_10008929 898
321 2162886007 SwRhRL2b_contig_1169502 SwRhRL2b_0304.00000650 899
322 3300003791 Ga0055530_10000229 Ga0055530_1000022922 899
323 3300003792 Ga0055540_1000240 Ga0055540_100024022 899
324 3300005288 Ga0065714_10005756 Ga0065714_100057566 899
325 3300005288 Ga0065714_10064726 Ga0065714_100647262 899
326 3300005289 Ga0065704_10001000 Ga0065704_1000100018 899
327 3300006051 Ga0075364_10008401 Ga0075364_100084014 899
328 3300009011 Ga0105251_10002267 Ga0105251_1000226711 899
329 3300009036 Ga0105244_10006165 Ga0105244_100061654 899
330 3300013100 Ga0157373_10016261 Ga0157373_100162612 899
331 3300013102 Ga0157371_10021954 Ga0157371_100219543 899
332 3300013306 Ga0163162_10020974 Ga0163162_100209743 899
333 3300014497 Ga0182008_10005828 Ga0182008_100058286 899
334 3300025298 Ga0209050_1000287 Ga0209050_100028727 899
335 3300025303 Ga0209051_1000199 Ga0209051_100019927 899
336 3300025728 Ga0207655_1000059 Ga0207655_100005916 899
337 3300025735 Ga0207713_1008918 Ga0207713_10089182 899
338 3300031911 Ga0307412_10000318 Ga0307412_1000031822 899
339 3300037471 Ga0395905_0001257 Ga0395905_0001257_11012_13726 899
340 3300041405 Ga0439438_000302 Ga0439438_000302_18133_20832 899
341 3300041407 Ga0439447_002706 Ga0439447_002706_2258_4957 899
342 3300041411 Ga0439466_0001093 Ga0439466_0001093_2079_4778 899
343 3300042010 Ga0439452_000773 Ga0439452_000773_4890_7589 899
344 3300042016 Ga0439463_000029 Ga0439463_000029_11153_13858 899
345 3300046452 Ga0495617_003028 Ga0495617_003028_1291_3999 899
346 3300046457 Ga0495590_0000280 Ga0495590_0000280_20364_23072 899
347 3300046458 Ga0495591_000782 Ga0495591_000782_7377_10082 899
348 3300046458 Ga0495591_000994 Ga0495591_000994_11288_13993 899
349 3300046471 Ga0495650_0000736 Ga0495650_0000736_18902_21607 899
350 3300046471 Ga0495650_0001218 Ga0495650_0001218_1082_3790 899
351 3300046471 Ga0495650_0013854 Ga0495650_0013854_1136_3841 899
352 3300046474 Ga0495605_0013872 Ga0495605_0013872_36_2741 899
353 3300046491 Ga0495584_0000018 Ga0495584_0000018_127010_129718 899
354 3300046491 Ga0495584_0001503 Ga0495584_0001503_2171_4876 899
355 3300046492 Ga0495585_0002124 Ga0495585_0002124_4565_7270 899
356 3300046492 Ga0495585_0011300 Ga0495585_0011300_2192_4900 899
357 3300046501 Ga0495607_0000722 Ga0495607_0000722_16256_18961 899
358 3300046501 Ga0495607_0002299 Ga0495607_0002299_12609_15314 899
359 3300046501 Ga0495607_0005525 Ga0495607_0005525_2569_5274 899
360 3300046506 Ga0495583_0001678 Ga0495583_0001678_11289_13994 899
361 3300046507 Ga0495606_0001604 Ga0495606_0001604_15252_17957 899
362 3300046507 Ga0495606_0001980 Ga0495606_0001980_3546_6251 899
363 3300046507 Ga0495606_0002688 Ga0495606_0002688_16596_19304 899
364 3300046507 Ga0495606_0009637 Ga0495606_0009637_4786_7491 899
365 3300046512 Ga0495610_0010178 Ga0495610_0010178_1462_4170 899
366 3300046515 Ga0495620_0000232 Ga0495620_0000232_7337_10042 899
367 3300046515 Ga0495620_0001314 Ga0495620_0001314_5417_8122 899
368 3300046519 Ga0495632_0002308 Ga0495632_0002308_11559_14267 899
369 3300046520 Ga0495637_0000385 Ga0495637_0000385_11289_13994 899
370 3300046520 Ga0495637_0002292 Ga0495637_0002292_1610_4315 899
371 3300046522 Ga0495643_0024809 Ga0495643_0024809_46_2760 899
372 3300046524 Ga0495648_0007114 Ga0495648_0007114_6099_8807 899
373 3300046528 Ga0495642_0000082 Ga0495642_0000082_22209_24917 899
374 3300046528 Ga0495642_0001189 Ga0495642_0001189_5495_8203 899
375 3300046530 Ga0495654_0000569 Ga0495654_0000569_17502_20207 899
376 3300046538 Ga0495609_0000316 Ga0495609_0000316_28615_31323 899
377 3300046538 Ga0495609_0000467 Ga0495609_0000467_18579_21284 899
378 3300046543 Ga0495645_0052482 Ga0495645_0052482_101_2806 899
379 3300046615 Ga0495656_0000998 Ga0495656_0000998_2648_5356 899
380 3300046648 Ga0495611_0000712 Ga0495611_0000712_5434_8139 899
381 3300046660 Ga0495625_0001076 Ga0495625_0001076_11393_14098 899
382 3300046665 Ga0495661_0000460 Ga0495661_0000460_21628_24333 899
383 3300046665 Ga0495661_0002362 Ga0495661_0002362_8087_10801 899
384 3300046684 Ga0495669_0000895 Ga0495669_0000895_9489_12197 899
385 3300046694 Ga0495649_0003952 Ga0495649_0003952_4278_6986 899
386 3300046794 Ga0495589_0001677 Ga0495589_0001677_6886_9585 899
387 3300046794 Ga0495589_0005960 Ga0495589_0005960_2525_5233 899
388 3300046810 Ga0495660_0001910 Ga0495660_0001910_7531_10239 899
389 3300046810 Ga0495660_0002629 Ga0495660_0002629_1244_3949 899
390 3300047320 Ga0495672_0001044 Ga0495672_0001044_20310_23018 899
391 3300047320 Ga0495672_0001525 Ga0495672_0001525_4327_7035 899
392 3300047321 Ga0495676_0000247 Ga0495676_0000247_21282_23987 899
393 3300047445 Ga0495677_0000486 Ga0495677_0000486_11518_14226 899
394 3300047446 Ga0495679_000141 Ga0495679_000141_59991_62696 899
395 3300047447 Ga0495685_004250 Ga0495685_004250_433_3141 899
396 3300047469 Ga0495673_0001157 Ga0495673_0001157_11050_13755 899
397 3300047469 Ga0495673_0003016 Ga0495673_0003016_1629_4334 899
398 3300047470 Ga0495681_0000027 Ga0495681_0000027_116820_119519 899
399 3300048091 Ga0495626_0000410 Ga0495626_0000410_16186_18891 899
400 3300048091 Ga0495626_0007218 Ga0495626_0007218_2505_5213 899
401 3300048924 Ga0496121_0001153 Ga0496121_0001153_12689_15394 899
402 3300048927 Ga0496124_0011812 Ga0496124_0011812_4834_7539 899
403 3300049459 Ga0495678_001849 Ga0495678_001849_634_3339 899
404 3300049460 Ga0495682_0000437 Ga0495682_0000437_10172_12877 899
405 3300049460 Ga0495682_0002618 Ga0495682_0002618_2175_4883 899
406 3300050489 nmdc:mga03683_6530_c1 nmdc:mga03683_6530_c1_227_2935 899

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17831

PDH_E1_M

Pyruvate dehydrogenase E1 component middle domain

497

717

0.98

PF22613

Transketolase_C_1

Transketolase-like TK C-terminal domain

734

868

0.93

PF00456

Transketolase_N

Transketolase, thiamine diphosphate binding domain

93

324

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lpl-assembly1.cif.gz_B e. coli pyruvate dehydrogenase complex e1 component e571a mutant 0.9566 64 899
2qta-assembly1.cif.gz_A e. coli pyruvate dehydrogenase e1 component e401k mutant with thiamin diphosphate 0.956 64 899
3lq4-assembly1.cif.gz_B e. coli pyruvate dehydrogenase complex e1 e235a mutant with high tdp concentration 0.9545 64 899
3lpl-assembly1.cif.gz_B e. coli pyruvate dehydrogenase complex e1 component e571a mutant 0.9542 64 899
2qta-assembly1.cif.gz_A e. coli pyruvate dehydrogenase e1 component e401k mutant with thiamin diphosphate 0.9537 64 899
ID Description Score Start End Superfamily
3lq2A03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.962 713 899 3.40.50.920
1l8aB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9593 64 478 3.40.50.970
3lq2A03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9569 713 899 3.40.50.920
1l8aB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9454 64 478 3.40.50.970
af_P9WIS9_741_922_3.40.50.920 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9073 713 890 3.40.50.920
ID Description Score Start End GO Terms
AF-A0A1E7PW13-F1-model_v4 Transketolase-like C-terminal domain-containing protein 0.9789 725 816 GO:0003824
AF-A0A5S3YLV8-F1-model_v4 Pyruvate dehydrogenase (Acetyl-transferring), homodimeric type 0.9781 296 414
AF-A0A4Y9T4K8-F1-model_v4 Pyruvate dehydrogenase (Acetyl-transferring), homodimeric type 0.9773 277 406
AF-A0A7V3JQ88-F1-model_v4 Pyruvate dehydrogenase E1 component middle domain-containing protein 0.9758 659 899 GO:0003824
AF-A0A519EKK0-F1-model_v4 Pyruvate dehydrogenase (Acetyl-transferring), homodimeric type 0.9746 160 526

Feature Viewer

pLDDT pTM Quality
82.87 0.84 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map