F435986

General Info

Members Datasets Scaffolds Average Seq Length
405 209 810 227

Family's Representative Sequence

Representative Sequence 3300032004|Ga0307414_10068241|Ga0307414_100682412
Length 246
Sequence MEPLTPRAFLASTPHDPAMTTYFTDKSFRFLRALARHNERAWFQAHKGDYDVHVRGPFQALLADLQPELRTVSEHFRSEPKTVGGSLFRIQRDTRFANDKTPYKSWQGARLFHERSRQVAAPSFYLHLQPGNCFVGAGLWHPETPTQRRVRQFIFDNPGSWQSAAHAPAFRRRFDLETDEMLVRPPRGFPADFTFIDDLRHKNFVASRAVDDSVMTGPRLRQTLAQDLVALGPFVDYLCAALDLEF

Samples

Sample ID Description Type Environment
1 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
8 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
9 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
10 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
11 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
15 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
16 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
31 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
32 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300012502 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610 Metagenome Rhizosphere
37 3300012512 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510 Metagenome Rhizosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
44 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
45 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
46 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
47 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
48 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
49 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
50 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
51 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
59 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
75 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
76 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
77 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
78 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
79 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
80 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
81 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
85 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
86 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
93 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
94 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
95 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
96 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
97 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
98 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
99 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
100 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
101 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
102 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
103 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
104 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
105 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
106 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
107 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
108 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
109 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
110 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
111 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
112 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
113 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
114 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
115 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
116 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
117 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
118 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
119 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
120 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
121 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
126 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
131 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
132 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
133 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
134 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
135 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
136 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
137 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
138 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
139 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
140 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
141 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
146 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
147 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
148 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
149 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
150 3300053734 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 endosphere Metagenome Endosphere
151 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
152 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
153 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
154 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
155 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
156 2643221559 Lysobacter sp. Root559 Isolate Unclassified
157 2643221573 Lysobacter sp. Root604 Isolate Unclassified
158 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
159 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
160 2643221586 Lysobacter sp. Root667 Isolate Unclassified
161 2643221593 Lysobacter sp. Root690 Isolate Unclassified
162 2643221612 Lysobacter sp. Root76 Isolate Unclassified
163 2643221695 Lysobacter sp. Root494 Isolate Unclassified
164 2643221720 Lysobacter sp. Root916 Isolate Unclassified
165 2643221727 Lysobacter sp. Root96 Isolate Unclassified
166 2643221728 Lysobacter sp. Root983 Isolate Unclassified
167 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
168 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
169 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
170 2818991457 Xanthomonas translucens 569 Isolate Unclassified
171 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
172 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
173 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
174 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
175 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
176 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
177 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
178 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
179 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
180 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
181 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
182 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
183 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
184 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
185 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
186 2919513703 Luteimonas sp. 3794 Isolate Unclassified
187 2919675420 Luteimonas terrae 4099 Isolate Unclassified
188 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
189 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
190 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
191 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
192 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
193 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
194 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
195 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
196 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
197 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
198 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
199 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
200 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
201 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
202 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
203 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
204 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
205 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
206 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
207 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
208 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
209 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.43
Metatranscriptomes 0
Isolates 14.57

Biome Distribution

Category Percentage (%)
Aerial Root 0.25
Bulb 0
Endosphere 27.41
Nodule 0.49
Rhizoplane 4.2
Rhizosphere 43.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307414_10068241 3300032004 Bacteria 2551
2 SwRhRL2b_contig_1819702 2162886007 Bacteria 1915
3 JGI25150J39212_1000179 3300002774 Bacteria 35481
4 JGI25151J46595_10000138 3300003187 Bacteria 96369
5 JGI25151J46595_10000148 3300003187 Bacteria 92040
6 JGI25151J46595_10063902 3300003187 Bacteria 1155
7 JGI25153J46596_10000102 3300003215 Bacteria 96369
8 Ga0055526_1000413 3300003771 Bacteria 34618
9 Ga0055537_1000349 3300003773 Bacteria 31443
10 Ga0055537_1000652 3300003773 Bacteria 18308
11 Ga0055524_1000054 3300003775 Bacteria 143118
12 Ga0055524_1004161 3300003775 Bacteria 6764
13 Ga0055524_1005329 3300003775 Bacteria 5764
14 Ga0055524_1008744 3300003775 Bacteria 4182
15 Ga0055536_1002383 3300003781 Bacteria 10598
16 Ga0055536_1008095 3300003781 Bacteria 4585
17 Ga0055536_1008410 3300003781 Bacteria 4438
18 Ga0055536_1022356 3300003781 Bacteria 1890
19 Ga0055536_1027107 3300003781 Bacteria 1592
20 Ga0055536_1033714 3300003781 Bacteria 1304
21 Ga0055534_1000073 3300003784 Bacteria 77473
22 Ga0055534_1000224 3300003784 Bacteria 41130
23 Ga0055528_1000021 3300003790 Bacteria 143118
24 Ga0055528_1000080 3300003790 Bacteria 75390
25 Ga0055528_1041430 3300003790 Bacteria 1026
26 Ga0055530_10001767 3300003791 Bacteria 15103
27 Ga0055530_10001774 3300003791 Bacteria 15004
28 Ga0055530_10003477 3300003791 Bacteria 8935
29 Ga0055531_10003032 3300003794 Bacteria 10884
30 Ga0055531_10008611 3300003794 Bacteria 5347
31 Ga0055531_10010262 3300003794 Bacteria 4679
32 Ga0055531_10010556 3300003794 Bacteria 4572
33 Ga0055531_10010965 3300003794 Bacteria 4434
34 Ga0055531_10011014 3300003794 Bacteria 4419
35 Ga0055531_10014362 3300003794 Bacteria 3568
36 Ga0055531_10015827 3300003794 Bacteria 3295
37 Ga0055531_10016428 3300003794 Bacteria 3192
38 Ga0058692_1000023 3300003856 Bacteria 237263
39 Ga0065704_10073413 3300005289 Bacteria 7197
40 Ga0065715_10099928 3300005293 Bacteria 3353
41 Ga0070670_100005062 3300005331 Bacteria 11088
42 Ga0068869_100760618 3300005334 Bacteria 830
43 Ga0070668_100034955 3300005347 Bacteria 3830
44 Ga0070669_100048846 3300005353 Bacteria 3089
45 Ga0070675_100288708 3300005354 Bacteria 1443
46 Ga0070671_100018634 3300005355 Bacteria 5640
47 Ga0070705_100066659 3300005440 Bacteria 2159
48 Ga0070665_100840488 3300005548 Bacteria 931
49 Ga0070665_100924231 3300005548 Bacteria 885
50 Ga0068854_100311772 3300005578 Bacteria 1276
51 Ga0068864_100063621 3300005618 Bacteria 3197
52 Ga0068863_100258821 3300005841 Bacteria 1682
53 Ga0075363_100171379 3300006048 Bacteria 1232
54 Ga0075364_10001177 3300006051 Bacteria 14015
55 Ga0075364_10015664 3300006051 Bacteria 4705
56 Ga0075364_10030348 3300006051 Bacteria 3469
57 Ga0075364_10124795 3300006051 Bacteria 1725
58 Ga0075364_10140839 3300006051 Bacteria 1622
59 Ga0075364_10200285 3300006051 Bacteria 1353
60 Ga0099826_10072952 3300006948 Bacteria 2171
61 Ga0105251_10000108 3300009011 Bacteria 81679
62 Ga0105251_10006958 3300009011 Bacteria 7082
63 Ga0105244_10064444 3300009036 Bacteria 1838
64 Ga0105243_10037165 3300009148 Bacteria 3782
65 Ga0105243_10119139 3300009148 Bacteria 2222
66 Ga0105241_10459679 3300009174 Bacteria 1127
67 Ga0105248_10428732 3300009177 Bacteria 1489
68 Ga0105248_10437688 3300009177 Bacteria 1473
69 Ga0157347_1018153 3300012502 Bacteria 804
70 Ga0157327_1000569 3300012512 Bacteria 2023
71 Ga0157373_10014543 3300013100 Bacteria 5769
72 Ga0157373_10032272 3300013100 Bacteria 3770
73 Ga0157373_10349927 3300013100 Bacteria 1054
74 Ga0157371_10003647 3300013102 Bacteria 13861
75 Ga0157371_10239583 3300013102 Bacteria 1304
76 Ga0157370_10007902 3300013104 Bacteria 11525
77 Ga0157370_10654026 3300013104 Bacteria 960
78 Ga0157370_10692258 3300013104 Bacteria 930
79 Ga0157369_10265989 3300013105 Bacteria 1788
80 Ga0157378_10028588 3300013297 Bacteria 4921
81 Ga0182008_10001765 3300014497 Bacteria 14173
82 Ga0182008_10002596 3300014497 Bacteria 11222
83 Ga0182008_10138466 3300014497 Bacteria 1217
84 Ga0182006_1015906 3300015261 Bacteria 3216
85 Ga0182007_10000353 3300015262 Bacteria 29023
86 Ga0182005_1000344 3300015265 Bacteria 26562
87 Ga0182005_1011728 3300015265 Bacteria 2491
88 Ga0183360_10001 3300015689 Bacteria 3943671
89 Ga0163161_10002464 3300017792 Bacteria 13212
90 Ga0163161_10012244 3300017792 Bacteria 5951
91 Ga0163161_10042923 3300017792 Bacteria 3255
92 Ga0163161_10207361 3300017792 Bacteria 1513
93 Ga0163161_10416927 3300017792 Bacteria 1079
94 Ga0163161_10416929 3300017792 Bacteria 1079
95 Ga0207425_1000078 3300025245 Bacteria 104429
96 Ga0207425_1001471 3300025245 Bacteria 9810
97 Ga0207425_1016936 3300025245 Bacteria 1610
98 Ga0209129_1000157 3300025258 Bacteria 105043
99 Ga0209565_1000001 3300025263 Bacteria 2950419
100 Ga0209565_1000022 3300025263 Bacteria 390888
101 Ga0209565_1007453 3300025263 Bacteria 2949
102 Ga0209673_1000001 3300025273 Bacteria 3176258
103 Ga0209673_1000087 3300025273 Bacteria 205213
104 Ga0209673_1004788 3300025273 Bacteria 7107
105 Ga0209130_1006405 3300025284 Bacteria 3832
106 Ga0209130_1011766 3300025284 Bacteria 2326
107 Ga0209675_1000001 3300025291 Bacteria 2950293
108 Ga0209675_1000060 3300025291 Bacteria 184316
109 Ga0209675_1010606 3300025291 Bacteria 3131
110 Ga0209675_1011326 3300025291 Bacteria 2965
111 Ga0209676_1000086 3300025292 Bacteria 264155
112 Ga0209676_1000114 3300025292 Bacteria 207416
113 Ga0209676_1000976 3300025292 Bacteria 34430
114 Ga0209676_1002896 3300025292 Bacteria 11248
115 Ga0209676_1004112 3300025292 Bacteria 8289
116 Ga0209676_1005159 3300025292 Bacteria 6946
117 Ga0209676_1007165 3300025292 Bacteria 5318
118 Ga0209676_1024334 3300025292 Bacteria 1965
119 Ga0209025_1000005 3300025294 Bacteria 1272149
120 Ga0209025_1000054 3300025294 Bacteria 317002
121 Ga0209025_1000888 3300025294 Bacteria 46712
122 Ga0209025_1007641 3300025294 Bacteria 7995
123 Ga0209025_1031059 3300025294 Bacteria 2537
124 Ga0209564_1000001 3300025295 Bacteria 3176258
125 Ga0209564_1000302 3300025295 Bacteria 97770
126 Ga0209564_1023094 3300025295 Bacteria 2173
127 Ga0209758_1000062 3300025297 Bacteria 317002
128 Ga0209758_1014179 3300025297 Bacteria 4265
129 Ga0209758_1041211 3300025297 Bacteria 1730
130 Ga0209050_1001760 3300025298 Bacteria 21464
131 Ga0209050_1002154 3300025298 Bacteria 17919
132 Ga0209050_1004098 3300025298 Bacteria 10183
133 Ga0209050_1015966 3300025298 Bacteria 3107
134 Ga0209050_1022014 3300025298 Bacteria 2300
135 Ga0209050_1024066 3300025298 Bacteria 2121
136 Ga0209050_1033000 3300025298 Bacteria 1578
137 Ga0209256_1000002 3300025299 Bacteria 1906740
138 Ga0209256_1001644 3300025299 Bacteria 21742
139 Ga0209256_1003098 3300025299 Bacteria 12168
140 Ga0209256_1003127 3300025299 Bacteria 12071
141 Ga0209256_1003341 3300025299 Bacteria 11380
142 Ga0209256_1018047 3300025299 Bacteria 2313
143 Ga0209051_1000606 3300025303 Bacteria 41704
144 Ga0209051_1003171 3300025303 Bacteria 11006
145 Ga0209257_1000014 3300025304 Bacteria 946850
146 Ga0209257_1000080 3300025304 Bacteria 312038
147 Ga0209257_1000121 3300025304 Bacteria 222588
148 Ga0209257_1000145 3300025304 Bacteria 195152
149 Ga0209257_1000369 3300025304 Bacteria 90982
150 Ga0209257_1002588 3300025304 Bacteria 17583
151 Ga0209257_1003930 3300025304 Bacteria 12080
152 Ga0209257_1005504 3300025304 Bacteria 8844
153 Ga0209257_1005863 3300025304 Bacteria 8308
154 Ga0209257_1006948 3300025304 Bacteria 7058
155 Ga0207713_1000507 3300025735 Bacteria 39676
156 Ga0207713_1007579 3300025735 Bacteria 6371
157 Ga0207688_10389380 3300025901 Bacteria 863
158 Ga0207681_10013804 3300025923 Bacteria 5005
159 Ga0207664_10381606 3300025929 Bacteria 1251
160 Ga0207709_10004839 3300025935 Bacteria 7716
161 Ga0207709_10099946 3300025935 Bacteria 1915
162 Ga0207668_10017752 3300025972 Bacteria 4465
163 Ga0207668_10032657 3300025972 Bacteria 3442
164 Ga0207640_10625429 3300025981 Bacteria 914
165 Ga0207641_10334884 3300026088 Bacteria 1439
166 Ga0207676_10509176 3300026095 Bacteria 1144
167 Ga0209371_1000007 3300027312 Bacteria 1050654
168 Ga0209371_1000059 3300027312 Bacteria 237154
169 Ga0268266_10040895 3300028379 Bacteria 3953
170 Ga0268266_10809143 3300028379 Bacteria 905
171 Ga0268256_1000008 3300030500 Bacteria 1050654
172 Ga0268256_1000055 3300030500 Bacteria 237299
173 Ga0316176_1015411 3300030732 Bacteria 1142
174 Ga0314311_1061605 3300030733 Bacteria 10551
175 Ga0316178_1178462 3300030735 Bacteria 965
176 Ga0316183_1073510 3300030742 Bacteria 3779
177 Ga0316181_1245613 3300030744 Bacteria 1052
178 Ga0307408_100571732 3300031548 Bacteria 1000
179 Ga0307408_100840306 3300031548 Bacteria 836
180 Ga0307413_10303946 3300031824 Bacteria 1211
181 Ga0307413_10563953 3300031824 Bacteria 926
182 Ga0307410_10631899 3300031852 Bacteria 896
183 Ga0307412_10005560 3300031911 Bacteria 7075
184 Ga0307412_10154209 3300031911 Bacteria 1699
185 Ga0307416_100531421 3300032002 Bacteria 1246
186 Ga0307414_10000472 3300032004 Bacteria 21101
187 Ga0307414_10004214 3300032004 Bacteria 7788
188 Ga0307414_10026372 3300032004 Bacteria 3739
189 Ga0307414_10030703 3300032004 Bacteria 3514
190 Ga0307414_10031464 3300032004 Bacteria 3481
191 Ga0307414_10112198 3300032004 Bacteria 2078
192 Ga0307414_10231632 3300032004 Bacteria 1523
193 Ga0307414_10367012 3300032004 Bacteria 1240
194 Ga0307411_10026666 3300032005 Bacteria 3483
195 Ga0307411_10593865 3300032005 Bacteria 951
196 Ga0373952_0053937 3300035092 Bacteria 966
197 Ga0395899_0379008 3300037312 Bacteria 940
198 Ga0395900_0004118 3300037418 Bacteria 15485
199 Ga0395900_1059821 3300037418 Bacteria 729
200 Ga0395898_0232845 3300037466 Bacteria 1757
201 Ga0395905_0000577 3300037471 Bacteria 49489
202 Ga0395905_0016182 3300037471 Bacteria 7088
203 Ga0395905_0145441 3300037471 Bacteria 2230
204 Ga0395905_0604803 3300037471 Bacteria 998
205 Ga0395901_0006121 3300038443 Bacteria 12193
206 Ga0395901_0289938 3300038443 Bacteria 1699
207 Ga0237819_00252 3300038705 Bacteria 19595
208 Ga0237819_03395 3300038705 Bacteria 2836
209 Ga0237819_11591 3300038705 Bacteria 1113
210 Ga0439436_0010083 3300041404 Bacteria 2886
211 Ga0439436_0012695 3300041404 Bacteria 2556
212 Ga0439436_0014422 3300041404 Bacteria 2383
213 Ga0439436_0060695 3300041404 Bacteria 1059
214 Ga0439439_0005742 3300041406 Bacteria 2847
215 Ga0439465_0002522 3300041413 Bacteria 5979
216 Ga0439465_0009365 3300041413 Bacteria 3084
217 Ga0451793_1611095 3300041452 Bacteria 1956
218 Ga0451806_099534 3300041462 Bacteria 2159
219 Ga0451804_1056523 3300041463 Bacteria 2257
220 Ga0451807_0875136 3300041486 Bacteria 2232
221 Ga0451807_1447748 3300041486 Bacteria 1872
222 Ga0451849_0264202 3300041505 Bacteria 939
223 Ga0439445_0013949 3300042004 Bacteria 1951
224 Ga0439432_008297 3300042006 Bacteria 3651
225 Ga0439432_028140 3300042006 Bacteria 1832
226 Ga0439432_105988 3300042006 Bacteria 838
227 Ga0439449_0006160 3300042007 Bacteria 4583
228 Ga0439449_0113985 3300042007 Bacteria 1002
229 Ga0439452_056706 3300042010 Bacteria 885
230 Ga0439462_0002149 3300042015 Bacteria 4533
231 Ga0439462_0102416 3300042015 Bacteria 790
232 Ga0450911_001812 3300042115 Bacteria 4579
233 Ga0495638_0010635 3300046460 Bacteria 6373
234 Ga0495638_0080554 3300046460 Bacteria 1978
235 Ga0495607_0044637 3300046501 Bacteria 2612
236 Ga0495610_0010303 3300046512 Bacteria 5820
237 Ga0495631_0004930 3300046518 Bacteria 7035
238 Ga0495643_0003481 3300046522 Bacteria 11485
239 Ga0495643_0073244 3300046522 Bacteria 1795
240 Ga0495663_0002475 3300046525 Bacteria 5555
241 Ga0495663_0004682 3300046525 Bacteria 3831
242 Ga0495609_0146392 3300046538 Bacteria 1006
243 Ga0495621_0000373 3300046539 Bacteria 10954
244 Ga0495633_0008578 3300046558 Bacteria 5743
245 Ga0495633_0009889 3300046558 Bacteria 5239
246 Ga0495656_0010169 3300046615 Bacteria 3411
247 Ga0495670_0070053 3300046691 Bacteria 1774
248 Ga0495671_0034943 3300046692 Bacteria 2554
249 Ga0495636_0000522 3300047318 Bacteria 14147
250 Ga0495636_0010410 3300047318 Bacteria 3672
251 Ga0495636_0048861 3300047318 Bacteria 1768
252 Ga0495636_0054108 3300047318 Bacteria 1686
253 Ga0495672_0000455 3300047320 Bacteria 48439
254 Ga0495681_0031270 3300047470 Bacteria 2697
255 Ga0495686_0010033 3300047472 Bacteria 6765
256 Ga0495686_0048292 3300047472 Bacteria 2684
257 Ga0496101_0151982 3300048904 Bacteria 1771
258 Ga0496103_0171076 3300048906 Bacteria 1395
259 Ga0496105_0017638 3300048908 Bacteria 5727
260 Ga0496106_0467226 3300048909 Bacteria 1013
261 Ga0496108_0031282 3300048911 Bacteria 4415
262 Ga0496108_0190903 3300048911 Bacteria 1775
263 Ga0496109_0090784 3300048912 Bacteria 2825
264 Ga0496109_0179242 3300048912 Bacteria 1989
265 Ga0496109_0375674 3300048912 Bacteria 1343
266 Ga0496112_0027675 3300048915 Bacteria 5467
267 Ga0496112_0209744 3300048915 Bacteria 1906
268 Ga0496113_0081965 3300048916 Bacteria 2473
269 Ga0496116_0008342 3300048919 Bacteria 9004
270 Ga0496116_0009818 3300048919 Bacteria 8110
271 Ga0496116_0044364 3300048919 Bacteria 3021
272 Ga0496117_0005879 3300048920 Bacteria 12682
273 Ga0496117_0006203 3300048920 Bacteria 12192
274 Ga0496117_0013334 3300048920 Bacteria 7177
275 Ga0496117_0053026 3300048920 Bacteria 2852
276 Ga0496117_0073611 3300048920 Bacteria 2278
277 Ga0496117_0120816 3300048920 Bacteria 1609
278 Ga0496118_0000362 3300048921 Bacteria 76786
279 Ga0496118_0006389 3300048921 Bacteria 12979
280 Ga0496118_0008539 3300048921 Bacteria 10565
281 Ga0496118_0024871 3300048921 Bacteria 5154
282 Ga0496118_0030076 3300048921 Bacteria 4542
283 Ga0496118_0033334 3300048921 Bacteria 4227
284 Ga0496118_0035208 3300048921 Bacteria 4070
285 Ga0496118_0053072 3300048921 Bacteria 3086
286 Ga0496119_0000851 3300048922 Bacteria 40261
287 Ga0496119_0006339 3300048922 Bacteria 11010
288 Ga0496119_0018796 3300048922 Bacteria 5123
289 Ga0496120_0001387 3300048923 Bacteria 29403
290 Ga0496120_0002462 3300048923 Bacteria 18657
291 Ga0496121_0011918 3300048924 Bacteria 9570
292 Ga0496121_0014077 3300048924 Bacteria 8532
293 Ga0496121_0029540 3300048924 Bacteria 5065
294 Ga0496121_0108311 3300048924 Bacteria 2125
295 Ga0496121_0121132 3300048924 Bacteria 1976
296 Ga0496122_0003014 3300048925 Bacteria 22846
297 Ga0496122_0003143 3300048925 Bacteria 22097
298 Ga0496122_0012114 3300048925 Bacteria 8634
299 Ga0496122_0018868 3300048925 Bacteria 6339
300 Ga0496122_0034021 3300048925 Bacteria 4179
301 Ga0496122_0044461 3300048925 Bacteria 3465
302 Ga0496123_0000619 3300048926 Bacteria 59624
303 Ga0496123_0000624 3300048926 Bacteria 59382
304 Ga0496123_0005952 3300048926 Bacteria 12009
305 Ga0496123_0011606 3300048926 Bacteria 7615
306 Ga0496123_0024153 3300048926 Bacteria 4628
307 Ga0496123_0089924 3300048926 Bacteria 1827
308 Ga0496124_0008706 3300048927 Bacteria 10546
309 Ga0496124_0009017 3300048927 Bacteria 10320
310 Ga0496124_0009858 3300048927 Bacteria 9770
311 Ga0496124_0022121 3300048927 Bacteria 5837
312 Ga0496124_0032020 3300048927 Bacteria 4650
313 Ga0496124_0049342 3300048927 Bacteria 3591
314 Ga0496124_0049394 3300048927 Bacteria 3589
315 Ga0496124_0076108 3300048927 Bacteria 2771
316 Ga0496124_0082265 3300048927 Bacteria 2643
317 Ga0496124_0192726 3300048927 Bacteria 1558
318 Ga0496124_0224809 3300048927 Bacteria 1408
319 Ga0496125_0008250 3300048928 Bacteria 10940
320 Ga0496125_0009310 3300048928 Bacteria 10130
321 Ga0496125_0013084 3300048928 Bacteria 8182
322 Ga0496125_0014372 3300048928 Bacteria 7713
323 Ga0496125_0051093 3300048928 Bacteria 3413
324 Ga0496125_0208061 3300048928 Bacteria 1273
325 Ga0496126_0010449 3300048929 Bacteria 9727
326 Ga0496126_0019242 3300048929 Bacteria 6729
327 Ga0496126_0026947 3300048929 Bacteria 5501
328 Ga0496126_0063110 3300048929 Bacteria 3322
329 Ga0496126_0112389 3300048929 Bacteria 2372
330 Ga0496126_0128157 3300048929 Bacteria 2195
331 Ga0496126_0451668 3300048929 Bacteria 1034
332 Ga0501034_0000344 3300049571 Bacteria 80851
333 Ga0501034_0000355 3300049571 Bacteria 78528
334 Ga0501034_0051239 3300049571 Bacteria 4162
335 Ga0501043_0071235 3300049579 Bacteria 2731
336 Ga0501047_0711023 3300049581 Bacteria 822
337 Ga0501225_0007339 3300049705 Bacteria 3195
338 nmdc:mga03n38_262929_c1 3300050490 Bacteria 915
339 nmdc:mga00v17_165312_c1 3300050491 Bacteria 1426
340 nmdc:mga00v17_226953_c1 3300050491 Bacteria 1210
341 nmdc:mga00v17_31977_c1 3300050491 Bacteria 3107
342 nmdc:mga00v17_35847_c1 3300050491 Bacteria 2955
343 nmdc:mga00v17_62411_c1 3300050491 Bacteria 2293
344 Ga0500643_023903 3300053087 Bacteria 1947
345 Ga0500634_0000095 3300053161 Bacteria 34310
346 Ga0500565_008888 3300053734 Bacteria 989
347 2525556792 2524614729 Bacteria 3091755
348 2547501133 2547132130 Bacteria 4660562
349 2572255042 2571042365 Bacteria 3289345
350 2578457867 2576861471 Bacteria 4648976
351 2630648388 2627854209 Bacteria 3093011
352 2643817681 2643221559 Bacteria 4424915
353 2643878905 2643221573 Bacteria 4784121
354 2643907834 2643221579 Bacteria 4443405
355 2643915960 2643221581 Bacteria 3893603
356 2643940391 2643221586 Bacteria 4446529
357 2643976700 2643221593 Bacteria 6296053
358 2644079466 2643221612 Bacteria 4361984
359 2644529432 2643221695 Bacteria 3441323
360 2644660221 2643221720 Bacteria 4694283
361 2644694908 2643221727 Bacteria 4415595
362 2644697523 2643221728 Bacteria 4797149
363 2747948032 2747842428 Bacteria 4689383
364 2765579627 2765235840 Bacteria 4663337
365 2816517707 2816332141 Bacteria 4436036
366 2819663034 2818991457 Bacteria 5323295
367 2842391889 2842391507 Bacteria 4486072
368 2842760157 2842757796 Bacteria 3981385
369 2842780807 2842780639 Bacteria 4337790
370 2852650304 2852649853 Bacteria 4036942
371 2852685973 2852684882 Bacteria 5463342
372 2857446782 2857442823 Bacteria 4562550
373 2874222323 2874220319 Bacteria 4594709
374 2894415702 2894414249 Bacteria 4405451
375 2895500659 2895498888 Bacteria 5283788
376 2895516471 2895511927 Bacteria 6802080
377 2895523609 2895522137 Bacteria 3284416
378 2895526809 2895525241 Bacteria 3388457
379 2919091098 2919089067 Bacteria 4560942
380 2919133511 2919130084 Bacteria 5301837
381 2919135419 2919134579 Bacteria 4480386
382 2919516384 2919513703 Bacteria 3844312
383 2919676961 2919675420 Bacteria 3969095
384 2923518510 2923516293 Bacteria 3716336
385 2928497648 2928496128 Bacteria 4631123
386 2929197435 2929195423 Bacteria 5325372
387 2931384223 2931380184 Bacteria 4455911
388 2937613292 2937610967 Bacteria 4618818
389 2939592926 2939589442 Bacteria 4214238
390 2939625666 2939622612 Bacteria 4698046
391 2939628952 2939626828 Bacteria 4695272
392 2941476391 2941475908 Bacteria 4145589
393 2941490484 2941489479 Bacteria 6313767
394 2961049088 2961047084 Bacteria 4594415
395 2961066216 2961064222 Bacteria 4749990
396 2974308467 2974307012 Bacteria 4172388
397 2977249221 2977247770 Bacteria 4160543
398 2984516323 2984514374 Bacteria 4172479
399 2987607270 2987605356 Bacteria 4187822
400 2995951551 2995948881 Bacteria 6358104
401 8002871963 8002869464 Bacteria 3588529
402 8003016100 8003014200 Bacteria 4059994
403 8021624231 8021622325 Bacteria 4844743
404 8021628277 8021626552 Bacteria 4665214
405 8021652023 8021648035 Bacteria 4772378
406 Ga0307414_10068241
407 SwRhRL2b_contig_1819702
408 JGI25150J39212_1000179
409 JGI25151J46595_10000138
410 JGI25151J46595_10000148
411 JGI25151J46595_10063902
412 JGI25153J46596_10000102
413 Ga0055526_1000413
414 Ga0055537_1000349
415 Ga0055537_1000652
416 Ga0055524_1000054
417 Ga0055524_1004161
418 Ga0055524_1005329
419 Ga0055524_1008744
420 Ga0055536_1002383
421 Ga0055536_1008095
422 Ga0055536_1008410
423 Ga0055536_1022356
424 Ga0055536_1027107
425 Ga0055536_1033714
426 Ga0055534_1000073
427 Ga0055534_1000224
428 Ga0055528_1000021
429 Ga0055528_1000080
430 Ga0055528_1041430
431 Ga0055530_10001767
432 Ga0055530_10001774
433 Ga0055530_10003477
434 Ga0055531_10003032
435 Ga0055531_10008611
436 Ga0055531_10010262
437 Ga0055531_10010556
438 Ga0055531_10010965
439 Ga0055531_10011014
440 Ga0055531_10014362
441 Ga0055531_10015827
442 Ga0055531_10016428
443 Ga0058692_1000023
444 Ga0065704_10073413
445 Ga0065715_10099928
446 Ga0070670_100005062
447 Ga0068869_100760618
448 Ga0070668_100034955
449 Ga0070669_100048846
450 Ga0070675_100288708
451 Ga0070671_100018634
452 Ga0070705_100066659
453 Ga0070665_100840488
454 Ga0070665_100924231
455 Ga0068854_100311772
456 Ga0068864_100063621
457 Ga0068863_100258821
458 Ga0075363_100171379
459 Ga0075364_10001177
460 Ga0075364_10015664
461 Ga0075364_10030348
462 Ga0075364_10124795
463 Ga0075364_10140839
464 Ga0075364_10200285
465 Ga0099826_10072952
466 Ga0105251_10000108
467 Ga0105251_10006958
468 Ga0105244_10064444
469 Ga0105243_10037165
470 Ga0105243_10119139
471 Ga0105241_10459679
472 Ga0105248_10428732
473 Ga0105248_10437688
474 Ga0157347_1018153
475 Ga0157327_1000569
476 Ga0157373_10014543
477 Ga0157373_10032272
478 Ga0157373_10349927
479 Ga0157371_10003647
480 Ga0157371_10239583
481 Ga0157370_10007902
482 Ga0157370_10654026
483 Ga0157370_10692258
484 Ga0157369_10265989
485 Ga0157378_10028588
486 Ga0182008_10001765
487 Ga0182008_10002596
488 Ga0182008_10138466
489 Ga0182006_1015906
490 Ga0182007_10000353
491 Ga0182005_1000344
492 Ga0182005_1011728
493 Ga0183360_10001
494 Ga0163161_10002464
495 Ga0163161_10012244
496 Ga0163161_10042923
497 Ga0163161_10207361
498 Ga0163161_10416927
499 Ga0163161_10416929
500 Ga0207425_1000078
501 Ga0207425_1001471
502 Ga0207425_1016936
503 Ga0209129_1000157
504 Ga0209565_1000001
505 Ga0209565_1000022
506 Ga0209565_1007453
507 Ga0209673_1000001
508 Ga0209673_1000087
509 Ga0209673_1004788
510 Ga0209130_1006405
511 Ga0209130_1011766
512 Ga0209675_1000001
513 Ga0209675_1000060
514 Ga0209675_1010606
515 Ga0209675_1011326
516 Ga0209676_1000086
517 Ga0209676_1000114
518 Ga0209676_1000976
519 Ga0209676_1002896
520 Ga0209676_1004112
521 Ga0209676_1005159
522 Ga0209676_1007165
523 Ga0209676_1024334
524 Ga0209025_1000005
525 Ga0209025_1000054
526 Ga0209025_1000888
527 Ga0209025_1007641
528 Ga0209025_1031059
529 Ga0209564_1000001
530 Ga0209564_1000302
531 Ga0209564_1023094
532 Ga0209758_1000062
533 Ga0209758_1014179
534 Ga0209758_1041211
535 Ga0209050_1001760
536 Ga0209050_1002154
537 Ga0209050_1004098
538 Ga0209050_1015966
539 Ga0209050_1022014
540 Ga0209050_1024066
541 Ga0209050_1033000
542 Ga0209256_1000002
543 Ga0209256_1001644
544 Ga0209256_1003098
545 Ga0209256_1003127
546 Ga0209256_1003341
547 Ga0209256_1018047
548 Ga0209051_1000606
549 Ga0209051_1003171
550 Ga0209257_1000014
551 Ga0209257_1000080
552 Ga0209257_1000121
553 Ga0209257_1000145
554 Ga0209257_1000369
555 Ga0209257_1002588
556 Ga0209257_1003930
557 Ga0209257_1005504
558 Ga0209257_1005863
559 Ga0209257_1006948
560 Ga0207713_1000507
561 Ga0207713_1007579
562 Ga0207688_10389380
563 Ga0207681_10013804
564 Ga0207664_10381606
565 Ga0207709_10004839
566 Ga0207709_10099946
567 Ga0207668_10017752
568 Ga0207668_10032657
569 Ga0207640_10625429
570 Ga0207641_10334884
571 Ga0207676_10509176
572 Ga0209371_1000007
573 Ga0209371_1000059
574 Ga0268266_10040895
575 Ga0268266_10809143
576 Ga0268256_1000008
577 Ga0268256_1000055
578 Ga0316176_1015411
579 Ga0314311_1061605
580 Ga0316178_1178462
581 Ga0316183_1073510
582 Ga0316181_1245613
583 Ga0307408_100571732
584 Ga0307408_100840306
585 Ga0307413_10303946
586 Ga0307413_10563953
587 Ga0307410_10631899
588 Ga0307412_10005560
589 Ga0307412_10154209
590 Ga0307416_100531421
591 Ga0307414_10000472
592 Ga0307414_10004214
593 Ga0307414_10026372
594 Ga0307414_10030703
595 Ga0307414_10031464
596 Ga0307414_10112198
597 Ga0307414_10231632
598 Ga0307414_10367012
599 Ga0307411_10026666
600 Ga0307411_10593865
601 Ga0373952_0053937
602 Ga0395899_0379008
603 Ga0395900_0004118
604 Ga0395900_1059821
605 Ga0395898_0232845
606 Ga0395905_0000577
607 Ga0395905_0016182
608 Ga0395905_0145441
609 Ga0395905_0604803
610 Ga0395901_0006121
611 Ga0395901_0289938
612 Ga0237819_00252
613 Ga0237819_03395
614 Ga0237819_11591
615 Ga0439436_0010083
616 Ga0439436_0012695
617 Ga0439436_0014422
618 Ga0439436_0060695
619 Ga0439439_0005742
620 Ga0439465_0002522
621 Ga0439465_0009365
622 Ga0451793_1611095
623 Ga0451806_099534
624 Ga0451804_1056523
625 Ga0451807_0875136
626 Ga0451807_1447748
627 Ga0451849_0264202
628 Ga0439445_0013949
629 Ga0439432_008297
630 Ga0439432_028140
631 Ga0439432_105988
632 Ga0439449_0006160
633 Ga0439449_0113985
634 Ga0439452_056706
635 Ga0439462_0002149
636 Ga0439462_0102416
637 Ga0450911_001812
638 Ga0495638_0010635
639 Ga0495638_0080554
640 Ga0495607_0044637
641 Ga0495610_0010303
642 Ga0495631_0004930
643 Ga0495643_0003481
644 Ga0495643_0073244
645 Ga0495663_0002475
646 Ga0495663_0004682
647 Ga0495609_0146392
648 Ga0495621_0000373
649 Ga0495633_0008578
650 Ga0495633_0009889
651 Ga0495656_0010169
652 Ga0495670_0070053
653 Ga0495671_0034943
654 Ga0495636_0000522
655 Ga0495636_0010410
656 Ga0495636_0048861
657 Ga0495636_0054108
658 Ga0495672_0000455
659 Ga0495681_0031270
660 Ga0495686_0010033
661 Ga0495686_0048292
662 Ga0496101_0151982
663 Ga0496103_0171076
664 Ga0496105_0017638
665 Ga0496106_0467226
666 Ga0496108_0031282
667 Ga0496108_0190903
668 Ga0496109_0090784
669 Ga0496109_0179242
670 Ga0496109_0375674
671 Ga0496112_0027675
672 Ga0496112_0209744
673 Ga0496113_0081965
674 Ga0496116_0008342
675 Ga0496116_0009818
676 Ga0496116_0044364
677 Ga0496117_0005879
678 Ga0496117_0006203
679 Ga0496117_0013334
680 Ga0496117_0053026
681 Ga0496117_0073611
682 Ga0496117_0120816
683 Ga0496118_0000362
684 Ga0496118_0006389
685 Ga0496118_0008539
686 Ga0496118_0024871
687 Ga0496118_0030076
688 Ga0496118_0033334
689 Ga0496118_0035208
690 Ga0496118_0053072
691 Ga0496119_0000851
692 Ga0496119_0006339
693 Ga0496119_0018796
694 Ga0496120_0001387
695 Ga0496120_0002462
696 Ga0496121_0011918
697 Ga0496121_0014077
698 Ga0496121_0029540
699 Ga0496121_0108311
700 Ga0496121_0121132
701 Ga0496122_0003014
702 Ga0496122_0003143
703 Ga0496122_0012114
704 Ga0496122_0018868
705 Ga0496122_0034021
706 Ga0496122_0044461
707 Ga0496123_0000619
708 Ga0496123_0000624
709 Ga0496123_0005952
710 Ga0496123_0011606
711 Ga0496123_0024153
712 Ga0496123_0089924
713 Ga0496124_0008706
714 Ga0496124_0009017
715 Ga0496124_0009858
716 Ga0496124_0022121
717 Ga0496124_0032020
718 Ga0496124_0049342
719 Ga0496124_0049394
720 Ga0496124_0076108
721 Ga0496124_0082265
722 Ga0496124_0192726
723 Ga0496124_0224809
724 Ga0496125_0008250
725 Ga0496125_0009310
726 Ga0496125_0013084
727 Ga0496125_0014372
728 Ga0496125_0051093
729 Ga0496125_0208061
730 Ga0496126_0010449
731 Ga0496126_0019242
732 Ga0496126_0026947
733 Ga0496126_0063110
734 Ga0496126_0112389
735 Ga0496126_0128157
736 Ga0496126_0451668
737 Ga0501034_0000344
738 Ga0501034_0000355
739 Ga0501034_0051239
740 Ga0501043_0071235
741 Ga0501047_0711023
742 Ga0501225_0007339
743 nmdc:mga03n38_262929_c1
744 nmdc:mga00v17_165312_c1
745 nmdc:mga00v17_226953_c1
746 nmdc:mga00v17_31977_c1
747 nmdc:mga00v17_35847_c1
748 nmdc:mga00v17_62411_c1
749 Ga0500643_023903
750 Ga0500634_0000095
751 Ga0500565_008888
752 2525556792
753 2547501133
754 2572255042
755 2578457867
756 2630648388
757 2643817681
758 2643878905
759 2643907834
760 2643915960
761 2643940391
762 2643976700
763 2644079466
764 2644529432
765 2644660221
766 2644694908
767 2644697523
768 2747948032
769 2765579627
770 2816517707
771 2819663034
772 2842391889
773 2842760157
774 2842780807
775 2852650304
776 2852685973
777 2857446782
778 2874222323
779 2894415702
780 2895500659
781 2895516471
782 2895523609
783 2895526809
784 2919091098
785 2919133511
786 2919135419
787 2919516384
788 2919676961
789 2923518510
790 2928497648
791 2929197435
792 2931384223
793 2937613292
794 2939592926
795 2939625666
796 2939628952
797 2941476391
798 2941490484
799 2961049088
800 2961066216
801 2974308467
802 2977249221
803 2984516323
804 2987607270
805 2995951551
806 8002871963
807 8003016100
808 8021624231
809 8021628277
810 8021652023

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09365

DUF2461

Conserved hypothetical protein (DUF2461)

26

237

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2a8e-assembly1.cif.gz_A three-dimensional structure of bacillus subtilis q45498 putative protein at resolution 2.5a. northeast structural genomics consortium target sr204. 0.603 2 222
2a8e-assembly1.cif.gz_A three-dimensional structure of bacillus subtilis q45498 putative protein at resolution 2.5a. northeast structural genomics consortium target sr204. 0.5907 2 222
3bvt-assembly1.cif.gz_A golgi mannosidase ii d204a catalytic nucleophile mutant complex with methyl (alpha-d-mannopyranosyl)-(1->3)-s-alpha-d-mannopyranoside 0.5892 84 122
3mqz-assembly1.cif.gz_A crystal structure of conserved protein duf1054 from pink subaerial biofilm microbial leptospirillum sp. group ii uba. 0.5426 31 223
6vu7-assembly1.cif.gz_A crystal structure of ybjn, a putative transcription regulator from e. coli 0.4855 91 223
ID Description Score Start End Superfamily
af_Q2G2G7_1_204_3.30.930.20 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Protein of unknown function DUF1054 0.5879 30 216 3.30.930.20
2a8eA00 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Protein of unknown function DUF1054 0.5847 2 222 3.30.930.20
2a8eA00 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Protein of unknown function DUF1054 0.5733 2 222 3.30.930.20
3mqzA00 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Protein of unknown function DUF1054 0.5498 27 223 3.30.930.20
af_Q2G2G7_1_204_3.30.930.20 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Protein of unknown function DUF1054 0.5235 30 216 3.30.930.20
ID Description Score Start End GO Terms
AF-A0A0R0DNQ3-F1-model_v4 deleted 0.9996 88 228
AF-A0A0R0DNQ3-F1-model_v4 deleted 0.9856 88 228
AF-A0A7W8FZS6-F1-model_v4 Uncharacterized protein (TIGR02453 family) 0.9855 2 228
AF-A0A4R2I6J2-F1-model_v4 Uncharacterized protein (TIGR02453 family) 0.9851 2 228
AF-A0A7W8FZS6-F1-model_v4 Uncharacterized protein (TIGR02453 family) 0.9812 2 228

Map