F435375

General Info

Members Datasets Scaffolds Average Seq Length
403 319 190 426

Family's Representative Sequence

Representative Sequence 3300009148|Ga0105243_10077441|Ga0105243_100774412
Length 500
Sequence MEVARYVGDAVPNGNRFWRFDAFPRLKRPSCHRSFRIAANPAKAAVKDSPSKRYRMGIAGTWRFPQRSGSTALLNSFLLLAEAVLYFGVMVSLFRFRHRIGLGVFVCALGVMHFLETYLASVFYVALPFGMVSPGSAVLFSGKLVMLLLLYIKEDAATVRQPIYGLLLGNALMIGLVLILRLHAISPLPDGKLPDIGFIDEMGWLMVWGTSLLFIDAILIILLYEKLGRYLRQAPFTRILISVACVLTFDQAGFFTALHFVAGAPLQVFFGGWFAKMAAALTYSAMLVAYLRWFETRQIAAPRGLSDIFDTLTYRERYEALVKHVGRDGLTGLLHRGSFETDGETAVAASLRMAKPLSLLIIDVDHFKSINDRFGHAEGDKVLKTIAAVLTEAVGAEGQVFRIGGEEFAILCARPHPVARLLGESVRHAVKASANTRKFDLTVSAGVSTVSDSTQRLADLFALADQRLYKAKLTGRDRVIGEPNADRLDAWNRSEQGAGG

Samples

Sample ID Description Type Environment
1 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
2 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
3 2512875016 Mesorhizobium japonicum R7A Isolate Nodule
4 2512875024 Mesorhizobium loti R88b Isolate Nodule
5 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
6 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
7 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
8 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
9 2588253730 Mesorhizobium huakuii 7653R Isolate Rhizosphere
10 2597489875 Mesorhizobium ciceri ca181 Isolate Unclassified
11 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
12 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
13 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
14 2643221547 Pseudolabrys sp. Root1462 Isolate Unclassified
15 2643221550 Mesorhizobium sp. Root552 Isolate Unclassified
16 2643221551 Mesorhizobium sp. Root1471 Isolate Unclassified
17 2643221555 Mesorhizobium sp. Root554 Isolate Unclassified
18 2643221582 Rhizobium sp. Root651 Isolate Unclassified
19 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
20 2643221599 Rhizobium sp. Root708 Isolate Unclassified
21 2643221623 Aminobacter sp. DSM 101952 Root100 Isolate Unclassified
22 2643221627 Mesorhizobium sp. Root102 Isolate Unclassified
23 2643221693 Rhizobium sp. Root491 Isolate Unclassified
24 2693429783 Mesorhizobium sp. LCM 4577 Isolate Rhizosphere
25 2693429784 Mesorhizobium sp. LCM 4576 Isolate Rhizosphere
26 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
27 2738543024 Aminobacter sp. AP02 Isolate Unclassified
28 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
29 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
30 2791355123 Mesorhizobium sophorae ICMP 19535 Isolate Unclassified
31 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
32 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
33 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
34 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
35 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
36 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
37 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
38 2841734538 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 Isolate Nodule
39 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
40 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
41 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
42 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
43 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
44 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
45 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
46 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
47 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
48 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
49 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
50 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
51 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
52 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
53 2844002411 Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 Isolate Nodule
54 2856314179 Mesorhizobium sp. M3A.F.Ca.ET.175.01.1.1 Isolate Nodule
55 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
56 2856349417 Mesorhizobium sp. M4A.F.Ca.ET.090.04.2.1 Isolate Nodule
57 2856356410 Mesorhizobium sp. M4B.F.Ca.ET.088.02.2.1 Isolate Nodule
58 2856364286 Mesorhizobium sp. M00.F.Ca.ET.151.01.1.1 Isolate Nodule
59 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
60 2869162929 Mesorhizobium sanjuanii BSA136 Isolate Nodule
61 2869234852 Mesorhizobium sp. M7A.T.Ca.US.000.02.2.1 Isolate Nodule
62 2869242130 Mesorhizobium sp. M7A.F.Ca.CA.004.11.2.1 Isolate Nodule
63 2869256925 Mesorhizobium sp. M7A.F.Ca.MR.176.00.0.0 Isolate Nodule
64 2869278585 Mesorhizobium sp. M8A.F.Ca.ET.198.01.1.1 Isolate Nodule
65 2871435913 Mesorhizobium sp. M7A.F.Ca.MR.228.00.0.0 Isolate Nodule
66 2871466892 Mesorhizobium sp. M7D.F.Ca.US.004.01.2.1 Isolate Nodule
67 2871474448 Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 Isolate Nodule
68 2871481445 Mesorhizobium sp. M7A.F.Ca.CA.004.02.1.1 Isolate Nodule
69 2871488783 Mesorhizobium sp. M4B.F.Ca.ET.203.01.1.1 Isolate Nodule
70 2871495908 Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 Isolate Nodule
71 2874109183 Mesorhizobium sp. M7A.T.Ca.TU.009.02.1.1 Isolate Nodule
72 2874116593 Mesorhizobium sp. M7A.F.Ca.CA.004.08.2.1 Isolate Nodule
73 2874139085 Mesorhizobium sp. M8A.F.Ca.ET.207.01.1.1 Isolate Nodule
74 2874146452 Mesorhizobium sp. M2D.F.Ca.ET.160.01.1.1 Isolate Nodule
75 2874155637 Mesorhizobium sp. M2D.F.Ca.ET.224.01.1.1 Isolate Nodule
76 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
77 2876377896 Mesorhizobium sp. M2C.T.Ca.TU.009.01.2.1 Isolate Nodule
78 2876386047 Mesorhizobium sp. M7A.F.Ca.CA.004.07.1.1 Isolate Nodule
79 2876392853 Mesorhizobium sp. M1D.F.Ca.ET.234.01.1.1 Isolate Nodule
80 2876413966 Mesorhizobium sp. M2D.F.Ca.ET.233.01.1.1 Isolate Nodule
81 2876420981 Mesorhizobium sp. M7A.F.Ca.CA.004.08.1.1 Isolate Nodule
82 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
83 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
84 2878760144 Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 Isolate Nodule
85 2878767105 Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 Isolate Nodule
86 2881155292 Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 Isolate Nodule
87 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
88 2881845957 Mesorhizobium sp. M4B.F.Ca.ET.019.03.1.1 Isolate Nodule
89 2881853255 Mesorhizobium sp. M4A.F.Ca.ET.020.02.1.1 Isolate Nodule
90 2881861095 Mesorhizobium sp. M4B.F.Ca.ET.049.02.1.2 Isolate Nodule
91 2882912400 Mesorhizobium sp. M4B.F.Ca.ET.013.02.1.1 Isolate Nodule
92 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
93 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
94 2885312484 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 Isolate Nodule
95 2885318864 Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 Isolate Nodule
96 2885326080 Mesorhizobium sp. M1E.F.Ca.ET.041.01.1.1 Isolate Nodule
97 2885342637 Mesorhizobium sp. M4A.F.Ca.ET.050.02.1.1 Isolate Nodule
98 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
99 2888337043 Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 Isolate Nodule
100 2889010040 Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 Isolate Nodule
101 2889016732 Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 Isolate Nodule
102 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
103 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
104 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
105 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
106 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
107 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
108 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
109 2903540706 Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 Isolate Nodule
110 2904659560 Mesorhizobium sp. M1D.F.Ca.ET.184.01.1.1 Isolate Nodule
111 2906378014 Mesorhizobium sp. M7D.F.Ca.US.004.03.1.1 Isolate Nodule
112 2906401398 Mesorhizobium sp. M7A.F.Ca.CA.004.10.1.1 Isolate Nodule
113 2906414383 Mesorhizobium sp. M3A.F.Ca.ET.174.01.1.1 Isolate Nodule
114 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
115 2924710171 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.2 Isolate Nodule
116 2924718760 Mesorhizobium sp. M8A.F.Ca.ET.023.01.1.1 Isolate Nodule
117 2924733363 Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1 Isolate Nodule
118 2924754689 Mesorhizobium sp. M5C.F.Ca.IN.020.32.2.1 Isolate Nodule
119 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
120 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
121 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
122 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
123 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
124 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
125 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
126 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
127 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
128 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
129 2937813078 Mesorhizobium sp. M2D.F.Ca.ET.223.01.1.1 Isolate Nodule
130 2937822353 Mesorhizobium neociceri CCANP35 Isolate Nodule
131 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
132 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
133 2937861824 Mesorhizobium sp. M7A.F.Ca.CA.001.07.2.1 Isolate Nodule
134 2937877337 Mesorhizobium sp. M8A.F.Ca.ET.161.01.1.1 Isolate Nodule
135 2937972304 Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 Isolate Nodule
136 2937980651 Mesorhizobium sp. M7A.F.Ca.CA.004.04.2.1 Isolate Nodule
137 2937994558 Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 Isolate Nodule
138 2938014810 Mesorhizobium sp. M2C.T.Ca.TU.002.02.1.1 Isolate Nodule
139 2958034702 Mesorhizobium sp. M8A.F.Ca.ET.202.01.1.1 Isolate Nodule
140 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
141 2958071322 Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 Isolate Nodule
142 2958084443 Mesorhizobium sp. M8A.F.Ca.ET.142.01.1.1 Isolate Nodule
143 2958100919 Mesorhizobium sp. M2A.F.Ca.ET.015.02.1.1 Isolate Nodule
144 2958108152 Mesorhizobium sp. M7A.F.Ca.CA.004.11.1.1 Isolate Nodule
145 2958144490 Mesorhizobium sp. M8A.F.Ca.ET.021.01.1.1 Isolate Nodule
146 2958165035 Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 Isolate Nodule
147 2958172287 Mesorhizobium sp. M2A.F.Ca.ET.029.05.1.1 Isolate Nodule
148 2961114664 Mesorhizobium sp. M1D.F.Ca.ET.231.01.1.1 Isolate Nodule
149 2961127735 Mesorhizobium sp. M4A.F.Ca.ET.029.04.2.1 Isolate Nodule
150 2961163497 Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 Isolate Nodule
151 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
152 2961183825 Mesorhizobium sp. M7A.F.Ca.CA.001.12.1.1 Isolate Nodule
153 2963644680 Mesorhizobium japonicum R7A Isolate Nodule
154 2965018300 Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 Isolate Nodule
155 2965119406 Mesorhizobium sp. M2A.F.Ca.ET.067.02.1.1 Isolate Nodule
156 2967996073 Mesorhizobium sp. M4B.F.Ca.ET.169.01.1.1 Isolate Nodule
157 2968003550 Mesorhizobium sp. M4B.F.Ca.ET.215.01.1.1 Isolate Nodule
158 2968016561 Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 Isolate Nodule
159 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
160 2968110612 Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 Isolate Nodule
161 2968171901 Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 Isolate Nodule
162 2970469710 Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 Isolate Nodule
163 2970489779 Mesorhizobium sp. M7A.F.Ca.US.008.03.1.1 Isolate Nodule
164 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
165 2970510686 Mesorhizobium sp. M7A.F.Ca.MR.148.00.0.0 Isolate Nodule
166 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
167 2970532167 Mesorhizobium sp. M7A.F.Ca.CA.002.05.1.1 Isolate Nodule
168 2970554993 Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 Isolate Nodule
169 2970593180 Mesorhizobium sp. M8A.F.Ca.ET.197.01.1.1 Isolate Nodule
170 2970619444 Mesorhizobium sp. M7A.F.Ca.ET.027.02.1.1 Isolate Nodule
171 2970627176 Mesorhizobium sp. M7A.F.Ca.US.006.01.2.1 Isolate Nodule
172 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
173 2977828996 Mesorhizobium sp. M4B.F.Ca.ET.089.01.1.1 Isolate Nodule
174 2977843712 Mesorhizobium sp. M2D.F.Ca.ET.140.01.1.1 Isolate Nodule
175 2977851361 Mesorhizobium sp. M7A.F.Ca.CA.004.06.2.1 Isolate Nodule
176 2977898635 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.1 Isolate Nodule
177 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
178 2977986579 Mesorhizobium intechi BD68 Isolate Unclassified
179 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
180 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
181 2979710463 Mesorhizobium sp. M2A.F.Ca.ET.017.03.2.1 Isolate Nodule
182 2979764755 Mesorhizobium sp. M7A.F.Ca.CA.004.05.2.1 Isolate Nodule
183 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
184 2987652177 Mesorhizobium sp. M2A.F.Ca.ET.042.01.1.1 Isolate Nodule
185 2987659509 Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 Isolate Nodule
186 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
187 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
188 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
189 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
190 2996386984 Mesorhizobium sp. M7A.F.Ca.MR.245.00.0.0 Isolate Nodule
191 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
192 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
193 3004167301 Mesorhizobium loti 582 Isolate Unclassified
194 3004188549 Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 Isolate Nodule
195 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
196 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
197 3004232784 Mesorhizobium sp. M7A.T.Ca.US.000.02.1.1 Isolate Nodule
198 3004248173 Mesorhizobium sp. M7A.F.Ca.CA.004.06.1.1 Isolate Nodule
199 3004268573 Mesorhizobium sp. M7A.F.Ca.US.010.02.1.1 Isolate Nodule
200 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
201 3004289098 Mesorhizobium sp. M8A.F.Ca.ET.023.02.2.1 Isolate Nodule
202 3004334049 Mesorhizobium huakuii 583 Isolate Unclassified
203 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
204 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
205 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
206 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
207 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
208 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
209 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
210 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
211 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
212 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
213 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
214 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
215 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
216 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
217 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
218 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
219 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
220 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
221 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
222 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
223 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
224 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
225 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
226 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
227 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
228 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
229 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
230 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
231 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
232 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
233 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
234 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
235 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
236 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
237 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
238 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
239 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
240 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
241 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
242 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
243 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
244 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
245 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
246 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
247 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
248 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
249 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
250 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
251 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
252 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
253 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
254 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
255 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
256 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
257 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
258 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
259 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
260 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
261 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
262 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
263 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
264 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
265 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
266 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
267 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
268 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
269 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
270 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
271 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
272 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
273 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
274 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
275 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
276 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
277 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
278 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
279 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
280 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
281 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
282 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
283 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
284 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
285 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
286 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
287 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
288 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
289 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
290 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
291 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
292 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
293 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
294 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
295 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
296 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
297 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
298 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
299 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
300 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
301 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
302 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
303 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
304 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
305 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
306 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
307 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
308 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
309 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
310 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
311 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
312 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
313 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
314 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
315 8004633249 Mesorhizobium sp. M6A.T.Ce.TU.002.03.1.1 Isolate Nodule
316 8004640170 Mesorhizobium sp. GbtcB19 Isolate Unclassified
317 8004695233 Mesorhizobium sp. M7A.F.Ca.US.001.01.1.1 Isolate Nodule
318 8004727605 Mesorhizobium sp. M7A.F.Ca.CA.004.01.1.1 Isolate Nodule
319 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 47.15
Metatranscriptomes 0
Isolates 52.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.68
Nodule 39.21
Rhizoplane 1.24
Rhizosphere 29.28
Stem 0
Stem Tuber 0
Unclassified 20.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1003371 3300002705 Bacteria 5270
2 JGI25157J39369_1000162 3300002741 Bacteria 55941
3 JGI25152J39213_1003247 3300002773 Bacteria 5642
4 JGI25165J46597_1000015 3300003214 Bacteria 380891
5 JGI25160J50197_1011479 3300003354 Bacteria 3139
6 Ga0055529_1001820 3300003763 Bacteria 5082
7 Ga0055529_1001864 3300003763 Bacteria 4933
8 Ga0055524_1003719 3300003775 Bacteria 7292
9 Ga0058692_1003473 3300003856 Bacteria 4859
10 Ga0070658_10028471 3300005327 Bacteria 4486
11 Ga0068853_100223756 3300005539 Bacteria 1719
12 Ga0070665_100029767 3300005548 Bacteria 5494
13 Ga0070665_100029796 3300005548 Bacteria 5492
14 Ga0068858_100151096 3300005842 Bacteria 2184
15 Ga0081539_10003450 3300005985 Bacteria 19403
16 Ga0075365_10004912 3300006038 Bacteria 7148
17 Ga0075365_10014417 3300006038 Bacteria 4754
18 Ga0075365_10094993 3300006038 Bacteria 2035
19 Ga0075365_10128935 3300006038 Bacteria 1749
20 Ga0075368_10003138 3300006042 Bacteria 5486
21 Ga0075368_10020485 3300006042 Bacteria 2506
22 Ga0075363_100011294 3300006048 Bacteria 4272
23 Ga0075364_10069853 3300006051 Bacteria 2311
24 Ga0075362_10007511 3300006177 Bacteria 4131
25 Ga0075362_10019123 3300006177 Bacteria 2844
26 Ga0075367_10078738 3300006178 Bacteria 1991
27 Ga0099826_10000246 3300006948 Bacteria 23828
28 Ga0099826_10023767 3300006948 Bacteria 4561
29 Ga0105243_10077441 3300009148 Bacteria 2705
30 Ga0105241_10148180 3300009174 Bacteria 1917
31 Ga0105248_10019813 3300009177 Bacteria 7451
32 Ga0105237_10028761 3300009545 Bacteria 5656
33 Ga0105238_10009265 3300009551 Bacteria 9853
34 Ga0105239_10060643 3300010375 Bacteria 4152
35 Ga0157373_10006450 3300013100 Bacteria 8762
36 Ga0157371_10000073 3300013102 Bacteria 163215
37 Ga0157370_10000367 3300013104 Bacteria 56787
38 Ga0157369_10268824 3300013105 Bacteria 1777
39 Ga0157374_10139679 3300013296 Bacteria 2351
40 Ga0182008_10037784 3300014497 Bacteria 2415
41 Ga0209672_101938 3300025228 Bacteria 5865
42 Ga0209026_1000025 3300025250 Bacteria 352548
43 Ga0209148_1000181 3300025254 Bacteria 124691
44 Ga0209759_1000121 3300025256 Bacteria 138469
45 Ga0209233_1000010 3300025261 Bacteria 1194329
46 Ga0209455_1000127 3300025272 Bacteria 162518
47 Ga0209455_1000910 3300025272 Bacteria 15412
48 Ga0209025_1000195 3300025294 Bacteria 148218
49 Ga0209025_1000358 3300025294 Bacteria 97655
50 Ga0207671_10010503 3300025914 Bacteria 7634
51 Ga0207657_10146241 3300025919 Bacteria 1927
52 Ga0207639_10003685 3300026041 Bacteria 10298
53 Ga0207639_10164521 3300026041 Bacteria 1872
54 Ga0207678_10091434 3300026067 Bacteria 2601
55 Ga0207648_10078780 3300026089 Bacteria 2875
56 Ga0209371_1000870 3300027312 Bacteria 24351
57 Ga0209282_1000135 3300027666 Bacteria 44288
58 Ga0209282_1043981 3300027666 Bacteria 2622
59 Ga0209813_10001290 3300027866 Bacteria 5591
60 Ga0268266_10009400 3300028379 Bacteria 8614
61 Ga0307515_10000233 3300028794 Bacteria 137311
62 Ga0307513_10022979 3300031456 Bacteria 7304
63 Ga0395900_0062780 3300037418 Bacteria 3819
64 Ga0395900_0221263 3300037418 Bacteria 1908
65 Ga0395905_0168961 3300037471 Bacteria 2054
66 Ga0395901_0018390 3300038443 Bacteria 7133
67 Ga0395901_0203231 3300038443 Bacteria 2076
68 Ga0495638_0014222 3300046460 Bacteria 5387
69 Ga0495620_0009171 3300046515 Bacteria 5275
70 Ga0496112_0006031 3300048915 Bacteria 10580
71 Ga0496113_0137390 3300048916 Bacteria 1921
72 Ga0496116_0012984 3300048919 Bacteria 6755
73 Ga0496116_0081422 3300048919 Bacteria 2007
74 Ga0496116_0090734 3300048919 Bacteria 1859
75 Ga0496117_0000002 3300048920 Bacteria 2483758
76 Ga0496117_0000959 3300048920 Bacteria 44152
77 Ga0496117_0006921 3300048920 Bacteria 11243
78 Ga0496117_0014762 3300048920 Bacteria 6706
79 Ga0496118_0000245 3300048921 Bacteria 96235
80 Ga0496118_0056293 3300048921 Bacteria 2958
81 Ga0496118_0074416 3300048921 Bacteria 2428
82 Ga0496119_0033735 3300048922 Bacteria 3387
83 Ga0496119_0037384 3300048922 Bacteria 3154
84 Ga0496119_0105607 3300048922 Bacteria 1573
85 Ga0496120_0000354 3300048923 Bacteria 75590
86 Ga0496120_0003090 3300048923 Bacteria 15675
87 Ga0496121_0000001 3300048924 Bacteria 1830318
88 Ga0496121_0000022 3300048924 Bacteria 472849
89 Ga0496122_0000001 3300048925 Bacteria 1827766
90 Ga0496122_0002299 3300048925 Bacteria 27612
91 Ga0496123_0000001 3300048926 Bacteria 1831497
92 Ga0496123_0000043 3300048926 Bacteria 253752
93 Ga0496124_0000206 3300048927 Bacteria 116591
94 Ga0496124_0003360 3300048927 Bacteria 19664
95 Ga0496124_0004951 3300048927 Bacteria 15268
96 Ga0496124_0050305 3300048927 Bacteria 3552
97 Ga0496124_0107835 3300048927 Bacteria 2246
98 Ga0496125_0000001 3300048928 Bacteria 1766138
99 Ga0496125_0000946 3300048928 Bacteria 45578
100 Ga0496125_0047897 3300048928 Bacteria 3569
101 Ga0496125_0164307 3300048928 Bacteria 1502
102 Ga0496126_0008951 3300048929 Bacteria 10719
103 Ga0496126_0021081 3300048929 Bacteria 6374
104 Ga0496126_0101696 3300048929 Bacteria 2514
105 Ga0496126_0132316 3300048929 Bacteria 2154
106 Ga0501031_0000036 3300049568 Bacteria 73760
107 Ga0501031_0049674 3300049568 Bacteria 2734
108 Ga0501032_0000100 3300049569 Bacteria 73505
109 Ga0501033_0000088 3300049570 Bacteria 87638
110 Ga0501033_0003117 3300049570 Bacteria 13769
111 Ga0501033_0019249 3300049570 Bacteria 5159
112 Ga0501033_0025132 3300049570 Bacteria 4487
113 Ga0501034_0000397 3300049571 Bacteria 73511
114 Ga0501034_0083882 3300049571 Bacteria 3188
115 Ga0501034_0118288 3300049571 Bacteria 2637
116 Ga0501034_0188781 3300049571 Bacteria 2023
117 Ga0501034_0234200 3300049571 Bacteria 1784
118 Ga0501034_0242678 3300049571 Bacteria 1747
119 Ga0501034_0317483 3300049571 Bacteria 1491
120 Ga0501036_0000056 3300049572 Bacteria 73511
121 Ga0501036_0086028 3300049572 Bacteria 2658
122 Ga0501036_0143707 3300049572 Bacteria 2012
123 Ga0501036_0149214 3300049572 Bacteria 1972
124 Ga0501037_0000119 3300049573 Bacteria 73510
125 Ga0501037_0157757 3300049573 Bacteria 1618
126 Ga0501038_0000098 3300049574 Bacteria 73471
127 Ga0501038_0082741 3300049574 Bacteria 2703
128 Ga0501039_0000013 3300049575 Bacteria 234418
129 Ga0501040_0027008 3300049576 Bacteria 3862
130 Ga0501042_0092516 3300049578 Bacteria 2171
131 Ga0501043_0001500 3300049579 Bacteria 20376
132 Ga0501043_0027509 3300049579 Bacteria 4463
133 Ga0501043_0059953 3300049579 Bacteria 2987
134 Ga0501043_0110898 3300049579 Bacteria 2154
135 Ga0501043_0124258 3300049579 Bacteria 2023
136 Ga0501046_0081520 3300049580 Bacteria 2499
137 Ga0501046_0146353 3300049580 Bacteria 1784
138 Ga0501047_0016556 3300049581 Bacteria 7039
139 Ga0501047_0016974 3300049581 Bacteria 6961
140 Ga0501047_0021595 3300049581 Bacteria 6182
141 Ga0501047_0062985 3300049581 Bacteria 3577
142 Ga0501047_0065879 3300049581 Bacteria 3491
143 Ga0501047_0150537 3300049581 Bacteria 2203
144 Ga0501048_0094257 3300049582 Bacteria 2112
145 Ga0501067_0019136 3300049583 Bacteria 3790
146 Ga0501067_0057747 3300049583 Bacteria 2149
147 Ga0501068_0012406 3300049584 Bacteria 4832
148 Ga0501069_0053154 3300049585 Bacteria 2256
149 Ga0501070_0001512 3300049586 Bacteria 20735
150 Ga0501070_0001911 3300049586 Bacteria 18392
151 Ga0501070_0057014 3300049586 Bacteria 3238
152 Ga0501070_0084682 3300049586 Bacteria 2625
153 Ga0501071_0207348 3300049587 Bacteria 1473
154 Ga0501073_0027629 3300049589 Bacteria 4057
155 Ga0501073_0094987 3300049589 Bacteria 2071
156 Ga0501073_0121136 3300049589 Bacteria 1813
157 Ga0501074_0072039 3300049590 Bacteria 2483
158 Ga0501080_0001591 3300049742 Bacteria 19269
159 Ga0501080_0049200 3300049742 Bacteria 3924
160 Ga0501080_0080122 3300049742 Bacteria 3035
161 Ga0501083_0087863 3300049744 Bacteria 2055
162 Ga0501035_0000053 3300049822 Bacteria 142860
163 Ga0501035_0002360 3300049822 Bacteria 18572
164 Ga0501035_0013467 3300049822 Bacteria 7551
165 Ga0501035_0084207 3300049822 Bacteria 2805
166 Ga0501035_0085284 3300049822 Bacteria 2784
167 Ga0501035_0123906 3300049822 Bacteria 2257
168 Ga0501035_0150035 3300049822 Bacteria 2023
169 Ga0501044_0000170 3300049823 Bacteria 80445
170 Ga0501044_0000214 3300049823 Bacteria 73483
171 Ga0501044_0007583 3300049823 Bacteria 11928
172 Ga0501044_0024108 3300049823 Bacteria 6464
173 Ga0501044_0045987 3300049823 Bacteria 4521
174 Ga0501044_0083795 3300049823 Bacteria 3223
175 Ga0501044_0188909 3300049823 Bacteria 2023
176 Ga0501045_0024012 3300049824 Bacteria 4376
177 nmdc:mga03683_11461_c1 3300050489 Bacteria 1715
178 nmdc:mga03n38_30671_c1 3300050490 Bacteria 2263
179 nmdc:mga00v17_18_c1 3300050491 Bacteria 121281
180 nmdc:mga00v17_57728_c1 3300050491 Bacteria 2375
181 nmdc:mga0yw44_109_c1 3300050492 Bacteria 28860
182 nmdc:mga0yw44_13885_c1 3300050492 Bacteria 4257
183 nmdc:mga0k408_105524_c1 3300050493 Bacteria 1664
184 nmdc:mga06z11_88204_c1 3300050494 Bacteria 1679
185 nmdc:mga0sz30_2906_c1 3300050516 Bacteria 6139
186 Ga0500610_0066987 3300053079 Bacteria 1872
187 Ga0500618_001405 3300053125 Bacteria 10803
188 Ga0500561_0000589 3300053137 Bacteria 5882
189 Ga0500616_0043330 3300053153 Bacteria 2405
190 Ga0500620_000140 3300053155 Bacteria 14616

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049572 Ga0501036_0086028 Ga0501036_0086028_1518_2642 371
2 3300053125 Ga0500618_001405 Ga0500618_001405_2858_4201 389
3 3300049571 Ga0501034_0083882 Ga0501034_0083882_1215_2513 392
4 iso_pu_bacteria 2937980651 2937988485 392
5 3300049579 Ga0501043_0059953 Ga0501043_0059953_108_1406 393
6 3300048927 Ga0496124_0000206 Ga0496124_0000206_18198_19472 402
7 3300049571 Ga0501034_0118288 Ga0501034_0118288_1206_2477 402
8 3300049570 Ga0501033_0019249 Ga0501033_0019249_12_1226 403
9 3300049581 Ga0501047_0062985 Ga0501047_0062985_2334_3548 403
10 iso_pu_bacteria 2693429783 2694631072 404
11 iso_pu_bacteria 2693429784 2694636430 404
12 iso_pu_bacteria 2929199973 2929202736 404
13 iso_pu_bacteria 8055909800 8055910309 404
14 iso_pu_bacteria 2883577096 2883580097 406
15 iso_pu_bacteria 2775506902 2776271065 407
16 iso_pu_bacteria 2775506904 2776282957 407
17 iso_pu_bacteria 2643221623 2644132175 408
18 iso_pu_bacteria 2738543024 2739307988 408
19 iso_pu_bacteria 2891373044 2891374089 408
20 iso_pu_bacteria 2989349275 2989349295 408
21 iso_pu_bacteria 3003930520 3003933225 408
22 iso_pu_bacteria 8002285264 8002286202 408
23 3300003763 Ga0055529_1001820 Ga0055529_10018202 409
24 3300025228 Ga0209672_101938 Ga0209672_1019384 409
25 3300025272 Ga0209455_1000910 Ga0209455_100091011 409
26 3300048924 Ga0496121_0000022 Ga0496121_0000022_358253_359566 409
27 3300048928 Ga0496125_0047897 Ga0496125_0047897_907_2154 409
28 3300049822 Ga0501035_0013467 Ga0501035_0013467_3813_5069 409
29 3300049822 Ga0501035_0084207 Ga0501035_0084207_402_1658 409
30 3300049823 Ga0501044_0000170 Ga0501044_0000170_17090_18346 409
31 3300025294 Ga0209025_1000358 Ga0209025_100035837 410
32 3300048920 Ga0496117_0000959 Ga0496117_0000959_37840_39087 410
33 3300048925 Ga0496122_0002299 Ga0496122_0002299_6267_7514 410
34 3300048926 Ga0496123_0000043 Ga0496123_0000043_214189_215436 410
35 3300048927 Ga0496124_0003360 Ga0496124_0003360_1339_2586 410
36 3300048928 Ga0496125_0000946 Ga0496125_0000946_5424_6671 410
37 3300048929 Ga0496126_0008951 Ga0496126_0008951_8386_9633 410
38 3300048929 Ga0496126_0021081 Ga0496126_0021081_4743_5990 410
39 3300049570 Ga0501033_0025132 Ga0501033_0025132_1832_3079 410
40 3300049571 Ga0501034_0242678 Ga0501034_0242678_481_1728 410
41 iso_pu_bacteria 2537561587 2537874867 410
42 iso_pu_bacteria 2554235003 2554247305 410
43 iso_pu_bacteria 2558860242 2559294438 410
44 iso_pu_bacteria 2599185210 2599602442 410
45 iso_pu_bacteria 2600255279 2601608574 410
46 iso_pu_bacteria 2600255308 2601745348 410
47 iso_pu_bacteria 2643221582 2643918818 410
48 iso_pu_bacteria 2643221693 2644518644 410
49 iso_pu_bacteria 2808606387 2808985788 410
50 iso_pu_bacteria 2821123053 2821129332 410
51 iso_pu_bacteria 2838675328 2838676624 410
52 iso_pu_bacteria 2838714209 2838715508 410
53 iso_pu_bacteria 2838719591 2838720692 410
54 iso_pu_bacteria 2838724970 2838726264 410
55 iso_pu_bacteria 2838736955 2838738755 410
56 iso_pu_bacteria 2841840854 2841840876 410
57 iso_pu_bacteria 2841846520 2841847623 410
58 iso_pu_bacteria 2841859092 2841859839 410
59 iso_pu_bacteria 2842124991 2842126347 410
60 iso_pu_bacteria 2842130223 2842131517 410
61 iso_pu_bacteria 2842140634 2842140656 410
62 iso_pu_bacteria 2842152218 2842153314 410
63 iso_pu_bacteria 2842170452 2842171751 410
64 iso_pu_bacteria 2842175837 2842176933 410
65 iso_pu_bacteria 2842187318 2842188616 410
66 iso_pu_bacteria 2842211629 2842212927 410
67 iso_pu_bacteria 2842224351 2842225454 410
68 iso_pu_bacteria 2842515876 2842516624 410
69 iso_pu_bacteria 2857531043 2857535287 410
70 iso_pu_bacteria 2885326080 2885331433 410
71 iso_pu_bacteria 2899792073 2899796713 410
72 iso_pu_bacteria 2899845264 2899847063 410
73 iso_pu_bacteria 2919114240 2919115664 410
74 iso_pu_bacteria 2926754445 2926756651 410
75 iso_pu_bacteria 2926760298 2926760895 410
76 iso_pu_bacteria 2929138655 2929139609 410
77 iso_pu_bacteria 2933006813 2933007957 410
78 iso_pu_bacteria 2933011516 2933012735 410
79 iso_pu_bacteria 2933594066 2933595169 410
80 iso_pu_bacteria 2979089926 2979093828 410
81 iso_pu_bacteria 2979095461 2979098789 410
82 iso_pu_bacteria 650716007 650739635 410
83 iso_pu_bacteria 8003570095 8003570691 410
84 3300028794 Ga0307515_10000233 Ga0307515_1000023316 411
85 3300031456 Ga0307513_10022979 Ga0307513_100229792 411
86 3300003856 Ga0058692_1003473 Ga0058692_10034733 412
87 3300005548 Ga0070665_100029796 Ga0070665_1000297965 412
88 3300005842 Ga0068858_100151096 Ga0068858_1001510962 412
89 3300006038 Ga0075365_10128935 Ga0075365_101289352 412
90 3300006042 Ga0075368_10003138 Ga0075368_100031385 412
91 3300006177 Ga0075362_10007511 Ga0075362_100075114 412
92 3300006178 Ga0075367_10078738 Ga0075367_100787382 412
93 3300006948 Ga0099826_10000246 Ga0099826_100002464 412
94 3300006948 Ga0099826_10023767 Ga0099826_100237674 412
95 3300013100 Ga0157373_10006450 Ga0157373_100064506 412
96 3300013102 Ga0157371_10000073 Ga0157371_10000073102 412
97 3300013104 Ga0157370_10000367 Ga0157370_1000036730 412
98 3300025294 Ga0209025_1000195 Ga0209025_100019541 412
99 3300027312 Ga0209371_1000870 Ga0209371_100087012 412
100 3300027666 Ga0209282_1000135 Ga0209282_100013516 412
101 3300027666 Ga0209282_1043981 Ga0209282_10439812 412
102 3300027866 Ga0209813_10001290 Ga0209813_100012903 412
103 3300048916 Ga0496113_0137390 Ga0496113_0137390_618_1889 412
104 3300048919 Ga0496116_0012984 Ga0496116_0012984_4900_6171 412
105 3300048919 Ga0496116_0081422 Ga0496116_0081422_79_1338 412
106 3300048920 Ga0496117_0000002 Ga0496117_0000002_1383471_1384742 412
107 3300048920 Ga0496117_0006921 Ga0496117_0006921_5376_6635 412
108 3300048920 Ga0496117_0014762 Ga0496117_0014762_4203_5468 412
109 3300048921 Ga0496118_0000245 Ga0496118_0000245_50539_51810 412
110 3300048921 Ga0496118_0056293 Ga0496118_0056293_1144_2403 412
111 3300048921 Ga0496118_0074416 Ga0496118_0074416_849_2114 412
112 3300048922 Ga0496119_0105607 Ga0496119_0105607_99_1358 412
113 3300048923 Ga0496120_0000354 Ga0496120_0000354_57900_59171 412
114 3300048924 Ga0496121_0000001 Ga0496121_0000001_980881_982146 412
115 3300048925 Ga0496122_0000001 Ga0496122_0000001_754261_755532 412
116 3300048926 Ga0496123_0000001 Ga0496123_0000001_757992_759263 412
117 3300048927 Ga0496124_0004951 Ga0496124_0004951_2571_3842 412
118 3300048927 Ga0496124_0050305 Ga0496124_0050305_2059_3318 412
119 3300048927 Ga0496124_0107835 Ga0496124_0107835_879_2144 412
120 3300048928 Ga0496125_0000001 Ga0496125_0000001_1094751_1096016 412
121 3300048928 Ga0496125_0164307 Ga0496125_0164307_196_1467 412
122 3300048929 Ga0496126_0132316 Ga0496126_0132316_787_2052 412
123 3300049571 Ga0501034_0317483 Ga0501034_0317483_73_1359 412
124 3300049589 Ga0501073_0027629 Ga0501073_0027629_290_1606 412
125 3300050489 nmdc:mga03683_11461_c1 nmdc:mga03683_11461_c1_361_1632 412
126 3300050490 nmdc:mga03n38_30671_c1 nmdc:mga03n38_30671_c1_585_1856 412
127 3300050491 nmdc:mga00v17_18_c1 nmdc:mga00v17_18_c1_104597_105868 412
128 3300050492 nmdc:mga0yw44_109_c1 nmdc:mga0yw44_109_c1_5731_7002 412
129 3300050493 nmdc:mga0k408_105524_c1 nmdc:mga0k408_105524_c1_314_1585 412
130 3300050494 nmdc:mga06z11_88204_c1 nmdc:mga06z11_88204_c1_191_1456 412
131 3300050516 nmdc:mga0sz30_2906_c1 nmdc:mga0sz30_2906_c1_3871_5142 412
132 3300053137 Ga0500561_0000589 Ga0500561_0000589_4119_5390 412
133 3300049568 Ga0501031_0049674 Ga0501031_0049674_1145_2434 413
134 3300049570 Ga0501033_0003117 Ga0501033_0003117_4739_6028 413
135 3300049581 Ga0501047_0016556 Ga0501047_0016556_4912_6201 413
136 3300049586 Ga0501070_0001512 Ga0501070_0001512_9388_10677 413
137 3300049589 Ga0501073_0121136 Ga0501073_0121136_150_1439 413
138 3300049742 Ga0501080_0001591 Ga0501080_0001591_1101_2390 413
139 3300049822 Ga0501035_0085284 Ga0501035_0085284_957_2246 413
140 3300049823 Ga0501044_0024108 Ga0501044_0024108_4554_5843 413
141 iso_pu_bacteria 2643221599 2644006013 414
142 iso_pu_bacteria 2856349417 2856353967 414
143 iso_pu_bacteria 2881155292 2881155304 414
144 iso_pu_bacteria 3005452660 3005453787 414
145 iso_pu_bacteria 2643221547 2643755449 415
146 iso_pu_bacteria 2842285085 2842287808 415
147 3300002773 JGI25152J39213_1003247 JGI25152J39213_10032473 416
148 3300003354 JGI25160J50197_1011479 JGI25160J50197_10114793 416
149 3300003775 Ga0055524_1003719 Ga0055524_10037193 416
150 3300009177 Ga0105248_10019813 Ga0105248_100198133 416
151 3300046515 Ga0495620_0009171 Ga0495620_0009171_1098_2369 416
152 3300048919 Ga0496116_0090734 Ga0496116_0090734_156_1469 416
153 3300049572 Ga0501036_0149214 Ga0501036_0149214_185_1477 417
154 3300049581 Ga0501047_0065879 Ga0501047_0065879_1936_3246 417
155 3300049586 Ga0501070_0057014 Ga0501070_0057014_414_1724 417
156 3300049823 Ga0501044_0045987 Ga0501044_0045987_2674_3984 417
157 iso_pu_bacteria 2856314179 2856319499 418
158 iso_pu_bacteria 2906414383 2906420219 418
159 iso_pu_bacteria 2937822353 2937824456 418
160 3300049568 Ga0501031_0000036 Ga0501031_0000036_13358_14620 419
161 3300049569 Ga0501032_0000100 Ga0501032_0000100_59185_60447 419
162 3300049570 Ga0501033_0000088 Ga0501033_0000088_13059_14321 419
163 3300049571 Ga0501034_0000397 Ga0501034_0000397_59191_60453 419
164 3300049572 Ga0501036_0000056 Ga0501036_0000056_59191_60453 419
165 3300049573 Ga0501037_0000119 Ga0501037_0000119_59190_60452 419
166 3300049574 Ga0501038_0000098 Ga0501038_0000098_59164_60426 419
167 3300049575 Ga0501039_0000013 Ga0501039_0000013_13059_14321 419
168 3300049576 Ga0501040_0027008 Ga0501040_0027008_2305_3567 419
169 3300049579 Ga0501043_0001500 Ga0501043_0001500_2327_3589 419
170 3300049579 Ga0501043_0027509 Ga0501043_0027509_1102_2388 419
171 3300049580 Ga0501046_0146353 Ga0501046_0146353_100_1386 419
172 3300049581 Ga0501047_0016974 Ga0501047_0016974_2291_3553 419
173 3300049586 Ga0501070_0084682 Ga0501070_0084682_123_1409 419
174 3300049822 Ga0501035_0000053 Ga0501035_0000053_128540_129802 419
175 3300049823 Ga0501044_0000214 Ga0501044_0000214_13059_14321 419
176 iso_pu_bacteria 2643221551 2643776118 419
177 iso_pu_bacteria 2643221555 2643794565 419
178 iso_pu_bacteria 2643221627 2644153254 419
179 iso_pu_bacteria 2924762789 2924764251 419
180 iso_pu_bacteria 2987666974 2987669246 419
181 3300049571 Ga0501034_0188781 Ga0501034_0188781_51_1316 420
182 3300049572 Ga0501036_0143707 Ga0501036_0143707_51_1316 420
183 3300049573 Ga0501037_0157757 Ga0501037_0157757_303_1568 420
184 3300049578 Ga0501042_0092516 Ga0501042_0092516_696_1961 420
185 3300049579 Ga0501043_0124258 Ga0501043_0124258_51_1316 420
186 3300049580 Ga0501046_0081520 Ga0501046_0081520_794_2059 420
187 3300049582 Ga0501048_0094257 Ga0501048_0094257_341_1606 420
188 3300049583 Ga0501067_0057747 Ga0501067_0057747_815_2080 420
189 3300049584 Ga0501068_0012406 Ga0501068_0012406_3410_4675 420
190 3300049585 Ga0501069_0053154 Ga0501069_0053154_634_1899 420
191 3300049587 Ga0501071_0207348 Ga0501071_0207348_163_1428 420
192 3300049742 Ga0501080_0080122 Ga0501080_0080122_478_1743 420
193 3300049744 Ga0501083_0087863 Ga0501083_0087863_95_1360 420
194 3300049822 Ga0501035_0150035 Ga0501035_0150035_51_1316 420
195 3300049823 Ga0501044_0188909 Ga0501044_0188909_708_1973 420
196 3300049824 Ga0501045_0024012 Ga0501045_0024012_784_2049 420
197 iso_pu_bacteria 2841734538 2841739195 420
198 iso_pu_bacteria 2871474448 2871475711 420
199 iso_pu_bacteria 2871495908 2871501398 420
200 iso_pu_bacteria 2878760144 2878765378 420
201 iso_pu_bacteria 2878767105 2878773086 420
202 iso_pu_bacteria 2903540706 2903546209 420
203 3300005985 Ga0081539_10003450 Ga0081539_1000345018 421
204 iso_pu_bacteria 2508501123 2509113132 421
205 iso_pu_bacteria 2509276022 2509396307 421
206 iso_pu_bacteria 2512875016 2512931502 421
207 iso_pu_bacteria 2513237305 2514420880 421
208 iso_pu_bacteria 2643221595 2643984397 421
209 iso_pu_bacteria 2721755686 2723575378 421
210 iso_pu_bacteria 2791355123 2792749235 421
211 iso_pu_bacteria 2844002411 2844007428 421
212 iso_pu_bacteria 2856320880 2856327483 421
213 iso_pu_bacteria 2856356410 2856361703 421
214 iso_pu_bacteria 2856364286 2856369458 421
215 iso_pu_bacteria 2869162929 2869167290 421
216 iso_pu_bacteria 2871466892 2871469822 421
217 iso_pu_bacteria 2871488783 2871494544 421
218 iso_pu_bacteria 2874139085 2874145872 421
219 iso_pu_bacteria 2874146452 2874149827 421
220 iso_pu_bacteria 2874155637 2874158085 421
221 iso_pu_bacteria 2876363079 2876368483 421
222 iso_pu_bacteria 2876377896 2876380338 421
223 iso_pu_bacteria 2876392853 2876398440 421
224 iso_pu_bacteria 2876413966 2876416289 421
225 iso_pu_bacteria 2878738818 2878745211 421
226 iso_pu_bacteria 2878753008 2878758874 421
227 iso_pu_bacteria 2881161766 2881167530 421
228 iso_pu_bacteria 2881845957 2881853103 421
229 iso_pu_bacteria 2881853255 2881853711 421
230 iso_pu_bacteria 2881861095 2881867314 421
231 iso_pu_bacteria 2882912400 2882912559 421
232 iso_pu_bacteria 2885312484 2885317991 421
233 iso_pu_bacteria 2885318864 2885323697 421
234 iso_pu_bacteria 2885342637 2885348259 421
235 iso_pu_bacteria 2885350715 2885356694 421
236 iso_pu_bacteria 2888337043 2888339422 421
237 iso_pu_bacteria 2889010040 2889010693 421
238 iso_pu_bacteria 2889016732 2889017608 421
239 iso_pu_bacteria 2903448605 2903451311 421
240 iso_pu_bacteria 2903492973 2903503887 421
241 iso_pu_bacteria 2903521522 2903527482 421
242 iso_pu_bacteria 2903528002 2903533936 421
243 iso_pu_bacteria 2904659560 2904664995 421
244 iso_pu_bacteria 2924718760 2924722613 421
245 iso_pu_bacteria 2924754689 2924762042 421
246 iso_pu_bacteria 2924776078 2924783348 421
247 iso_pu_bacteria 2924784321 2924789078 421
248 iso_pu_bacteria 2937813078 2937815737 421
249 iso_pu_bacteria 2937836603 2937839383 421
250 iso_pu_bacteria 2937848649 2937851824 421
251 iso_pu_bacteria 2937877337 2937882125 421
252 iso_pu_bacteria 2937972304 2937978585 421
253 iso_pu_bacteria 2937994558 2938000067 421
254 iso_pu_bacteria 2938014810 2938022090 421
255 iso_pu_bacteria 2958071322 2958078198 421
256 iso_pu_bacteria 2958084443 2958089247 421
257 iso_pu_bacteria 2958100919 2958105743 421
258 iso_pu_bacteria 2958144490 2958146134 421
259 iso_pu_bacteria 2958165035 2958170531 421
260 iso_pu_bacteria 2958172287 2958173530 421
261 iso_pu_bacteria 2961114664 2961119994 421
262 iso_pu_bacteria 2961163497 2961168986 421
263 iso_pu_bacteria 2963644680 2963647710 421
264 iso_pu_bacteria 2965018300 2965024273 421
265 iso_pu_bacteria 2965119406 2965122062 421
266 iso_pu_bacteria 2968016561 2968018452 421
267 iso_pu_bacteria 2968083720 2968090341 421
268 iso_pu_bacteria 2968110612 2968116351 421
269 iso_pu_bacteria 2968171901 2968177380 421
270 iso_pu_bacteria 2970469710 2970471375 421
271 iso_pu_bacteria 2970554993 2970560226 421
272 iso_pu_bacteria 2977843712 2977845973 421
273 iso_pu_bacteria 2977922695 2977924219 421
274 iso_pu_bacteria 2977986579 2977989414 421
275 iso_pu_bacteria 2979710463 2979717545 421
276 iso_pu_bacteria 2987652177 2987658403 421
277 iso_pu_bacteria 2987659509 2987665017 421
278 iso_pu_bacteria 2996348954 2996350167 421
279 iso_pu_bacteria 3000135777 3000140663 421
280 iso_pu_bacteria 3004188549 3004194074 421
281 iso_pu_bacteria 3004211236 3004215954 421
282 iso_pu_bacteria 3004218560 3004223704 421
283 iso_pu_bacteria 3004275668 3004276866 421
284 iso_pu_bacteria 3004289098 3004290896 421
285 iso_pu_bacteria 8004633249 8004634828 421
286 iso_pu_bacteria 8004640170 8004640823 421
287 3300049571 Ga0501034_0234200 Ga0501034_0234200_455_1726 422
288 3300049579 Ga0501043_0110898 Ga0501043_0110898_510_1781 422
289 3300049581 Ga0501047_0150537 Ga0501047_0150537_384_1655 422
290 3300049822 Ga0501035_0123906 Ga0501035_0123906_212_1483 422
291 3300053079 Ga0500610_0066987 Ga0500610_0066987_109_1392 422
292 3300053155 Ga0500620_000140 Ga0500620_000140_3914_5197 422
293 iso_pu_bacteria 2885305155 2885309432 422
294 3300005548 Ga0070665_100029767 Ga0070665_1000297672 423
295 3300006038 Ga0075365_10094993 Ga0075365_100949932 423
296 3300009148 Ga0105243_10077441 Ga0105243_100774412 423
297 3300026089 Ga0207648_10078780 Ga0207648_100787802 423
298 3300028379 Ga0268266_10009400 Ga0268266_100094006 423
299 3300046460 Ga0495638_0014222 Ga0495638_0014222_236_1672 423
300 3300049574 Ga0501038_0082741 Ga0501038_0082741_394_1680 423
301 3300049581 Ga0501047_0021595 Ga0501047_0021595_3316_4602 423
302 3300049586 Ga0501070_0001911 Ga0501070_0001911_10253_11539 423
303 3300049589 Ga0501073_0094987 Ga0501073_0094987_725_2011 423
304 3300049590 Ga0501074_0072039 Ga0501074_0072039_766_2052 423
305 3300049742 Ga0501080_0049200 Ga0501080_0049200_1067_2353 423
306 3300049822 Ga0501035_0002360 Ga0501035_0002360_8880_10166 423
307 3300049823 Ga0501044_0007583 Ga0501044_0007583_4531_5817 423
308 3300053153 Ga0500616_0043330 Ga0500616_0043330_749_2053 423
309 iso_pu_bacteria 2996310559 2996315493 423
310 iso_pu_bacteria 2970524798 2970528592 424
311 3300002705 JGI25156J39149_1003371 JGI25156J39149_10033713 425
312 3300002741 JGI25157J39369_1000162 JGI25157J39369_100016236 425
313 3300003214 JGI25165J46597_1000015 JGI25165J46597_1000015183 425
314 3300003763 Ga0055529_1001864 Ga0055529_10018642 425
315 3300005327 Ga0070658_10028471 Ga0070658_100284713 425
316 3300005539 Ga0068853_100223756 Ga0068853_1002237561 425
317 3300006038 Ga0075365_10004912 Ga0075365_100049125 425
318 3300006038 Ga0075365_10014417 Ga0075365_100144174 425
319 3300006042 Ga0075368_10020485 Ga0075368_100204853 425
320 3300006048 Ga0075363_100011294 Ga0075363_1000112942 425
321 3300006051 Ga0075364_10069853 Ga0075364_100698531 425
322 3300006177 Ga0075362_10019123 Ga0075362_100191232 425
323 3300009174 Ga0105241_10148180 Ga0105241_101481801 425
324 3300009545 Ga0105237_10028761 Ga0105237_100287612 425
325 3300009551 Ga0105238_10009265 Ga0105238_100092654 425
326 3300010375 Ga0105239_10060643 Ga0105239_100606432 425
327 3300013105 Ga0157369_10268824 Ga0157369_102688241 425
328 3300013296 Ga0157374_10139679 Ga0157374_101396791 425
329 3300014497 Ga0182008_10037784 Ga0182008_100377843 425
330 3300025250 Ga0209026_1000025 Ga0209026_1000025130 425
331 3300025254 Ga0209148_1000181 Ga0209148_100018194 425
332 3300025256 Ga0209759_1000121 Ga0209759_1000121102 425
333 3300025261 Ga0209233_1000010 Ga0209233_1000010281 425
334 3300025272 Ga0209455_1000127 Ga0209455_100012794 425
335 3300025914 Ga0207671_10010503 Ga0207671_100105036 425
336 3300025919 Ga0207657_10146241 Ga0207657_101462412 425
337 3300026041 Ga0207639_10003685 Ga0207639_1000368511 425
338 3300026041 Ga0207639_10164521 Ga0207639_101645211 425
339 3300026067 Ga0207678_10091434 Ga0207678_100914342 425
340 3300037418 Ga0395900_0062780 Ga0395900_0062780_95_1423 425
341 3300037418 Ga0395900_0221263 Ga0395900_0221263_45_1544 425
342 3300037471 Ga0395905_0168961 Ga0395905_0168961_234_1607 425
343 3300038443 Ga0395901_0018390 Ga0395901_0018390_903_2201 425
344 3300038443 Ga0395901_0203231 Ga0395901_0203231_279_1652 425
345 3300048915 Ga0496112_0006031 Ga0496112_0006031_3456_4793 425
346 3300048922 Ga0496119_0033735 Ga0496119_0033735_1083_2420 425
347 3300048922 Ga0496119_0037384 Ga0496119_0037384_41_1525 425
348 3300048923 Ga0496120_0003090 Ga0496120_0003090_9124_10608 425
349 3300048929 Ga0496126_0101696 Ga0496126_0101696_471_1757 425
350 3300049583 Ga0501067_0019136 Ga0501067_0019136_1873_3201 425
351 3300049823 Ga0501044_0083795 Ga0501044_0083795_1695_3041 425
352 3300050491 nmdc:mga00v17_57728_c1 nmdc:mga00v17_57728_c1_890_2185 425
353 3300050492 nmdc:mga0yw44_13885_c1 nmdc:mga0yw44_13885_c1_832_2286 425
354 iso_pu_bacteria 2512875024 2512959333 425
355 iso_pu_bacteria 2588253730 2588517339 425
356 iso_pu_bacteria 2597489875 2597813228 425
357 iso_pu_bacteria 2643221550 2643771112 425
358 iso_pu_bacteria 2869234852 2869237210 425
359 iso_pu_bacteria 2869242130 2869244704 425
360 iso_pu_bacteria 2869256925 2869260296 425
361 iso_pu_bacteria 2869278585 2869284929 425
362 iso_pu_bacteria 2871435913 2871442681 425
363 iso_pu_bacteria 2871481445 2871486243 425
364 iso_pu_bacteria 2874109183 2874112355 425
365 iso_pu_bacteria 2874116593 2874122669 425
366 iso_pu_bacteria 2876386047 2876386705 425
367 iso_pu_bacteria 2876420981 2876422995 425
368 iso_pu_bacteria 2906378014 2906379575 425
369 iso_pu_bacteria 2906401398 2906405391 425
370 iso_pu_bacteria 2924710171 2924715701 425
371 iso_pu_bacteria 2924733363 2924736443 425
372 iso_pu_bacteria 2937861824 2937862767 425
373 iso_pu_bacteria 2958034702 2958040631 425
374 iso_pu_bacteria 2958041894 2958056713 425
375 iso_pu_bacteria 2958108152 2958111522 425
376 iso_pu_bacteria 2961127735 2961131614 425
377 iso_pu_bacteria 2961170736 2961176047 425
378 iso_pu_bacteria 2961183825 2961185943 425
379 iso_pu_bacteria 2967996073 2968001935 425
380 iso_pu_bacteria 2968003550 2968009041 425
381 iso_pu_bacteria 2970489779 2970491119 425
382 iso_pu_bacteria 2970503327 2970508713 425
383 iso_pu_bacteria 2970510686 2970514621 425
384 iso_pu_bacteria 2970532167 2970532193 425
385 iso_pu_bacteria 2970593180 2970599544 425
386 iso_pu_bacteria 2970619444 2970620846 425
387 iso_pu_bacteria 2970627176 2970628902 425
388 iso_pu_bacteria 2977821940 2977827414 425
389 iso_pu_bacteria 2977828996 2977830949 425
390 iso_pu_bacteria 2977851361 2977854379 425
391 iso_pu_bacteria 2977898635 2977904375 425
392 iso_pu_bacteria 2979764755 2979766237 425
393 iso_pu_bacteria 2979808191 2979811639 425
394 iso_pu_bacteria 2996386984 2996391445 425
395 iso_pu_bacteria 3004167301 3004168900 425
396 iso_pu_bacteria 3004232784 3004235835 425
397 iso_pu_bacteria 3004248173 3004254843 425
398 iso_pu_bacteria 3004268573 3004274944 425
399 iso_pu_bacteria 3004334049 3004334360 425
400 iso_pu_bacteria 637000159 637074601 425
401 iso_pu_bacteria 8004374579 8004380395 425
402 iso_pu_bacteria 8004695233 8004695809 425
403 iso_pu_bacteria 8004727605 8004732516 425

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20973

VUPS

Vitamin uptake-like sensor

87

291

0.99

PF00990

GGDEF

Diguanylate cyclase, GGDEF domain

325

478

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ign-assembly1.cif.gz_A crystal structure of the ggdef domain from marinobacter aquaeolei diguanylate cyclase complexed with c-di-gmp - northeast structural genomics consortium target mqr89a 0.9378 251 411
6tts-assembly1.cif.gz_A crystal structure of the ggdef domain of dgcb from caulobacter crescentus in complex with c-di-gmp 0.9298 254 409
6tts-assembly1.cif.gz_B crystal structure of the ggdef domain of dgcb from caulobacter crescentus in complex with c-di-gmp 0.9286 253 409
4iob-assembly1.cif.gz_A crystal structure of the ggdef domain of pa1120 (yfin or tpbb) from pseudomonas aeruginosa at 2.7 ang. 0.9258 259 411
6eib-assembly4.cif.gz_D structure of the active ggeef domain of a diguanylate cyclase from vibrio cholerae. 0.9235 261 413
ID Description Score Start End Superfamily
af_P75908_278_448_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9348 252 409 3.30.70.270
2v0nA03 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9278 254 412 3.30.70.270
4iobA00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9258 259 411 3.30.70.270
6eibC00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9253 261 413 3.30.70.270
af_Q2G061_179_351_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9223 248 410 3.30.70.270
ID Description Score Start End GO Terms
AF-A0A529XQY8-F1-model_v4 GGDEF domain-containing protein 0.9494 1 175 GO:0016020
AF-A0A847BTY7-F1-model_v4 GGDEF domain-containing protein 0.9483 273 411 GO:0005886
GO:0043709
GO:0052621
GO:1902201
AF-A0A529XQY8-F1-model_v4 GGDEF domain-containing protein 0.9391 1 175 GO:0016020
AF-A0A6N0I0K6-F1-model_v4 diguanylate cyclase (EC 2.7.7.65) 0.9314 254 411 GO:0005886
GO:0043709
GO:0052621
GO:1902201
AF-A0A1G3TQG0-F1-model_v4 Diguanylate cyclase 0.9264 246 407

Feature Viewer

pLDDT pTM Quality
84.71 0.57 Medium
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Predicted Structure (AlphaFold2)

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