F434284

General Info

Members Datasets Scaffolds Average Seq Length
399 193 392 498

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10085190|Ga0105237_100851902
Length 533
Sequence LVVFCNTFILQLRATITGVYRIYYRGLTIPLSMIMHKILLFNPRSANAKYRIPNSILNIAASVEGKYPWVIVDGNREQDSLSKILGYIETGGFRYVGITVMPGPQLKEAIPVSKAIRELYPEVIIIWGGYFASNQYKVVLNAGYVDFVVNGPGDHCFPKLIDALENNQPYELIKNLIYKSGDNIIKTIKEDLIEQDDLPPLPYDKLSEFYPMEKYLGKTYLGKKTIAYHSSIGCPFTCSFCAVVPIYEARWKAKSAEAVYRDIKYIKDKWGGDAIEFHDNNFFVSEKRTVEFARLIMPEKMTWWGMARIDTMSKFKDSTLALIREAGCKIIFFGAESGNDAILKQMDKGGTQSGEQIAAFAARMKKFDIIPEYSFVLGTPAPTPLEVEAQIDFDIKFIKRIKAINPGTEIVIYTYSPVPAEGSELFKQATDKGFSFPQKLEDWISPAWENFDLRKNPLTPWLTPQMIDKIRNFETVLNGYYPTVTDIRLNGFKRWAIHALAGLRYKINLHRYPYEIKLLQRIWKYRQPEIQGF

Samples

Sample ID Description Type Environment
1 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
2 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
3 2738541278 Niastella sp. CF465 Isolate Unclassified
4 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
5 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
6 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
7 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
8 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
9 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
10 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
11 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
12 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
13 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
14 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
15 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
16 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
17 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
20 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
21 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
22 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
23 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
24 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
25 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
26 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
29 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
30 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
31 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
32 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
33 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
34 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
35 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
36 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
37 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
40 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
41 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
51 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
52 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
53 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
54 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
55 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
57 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
71 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
72 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
73 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
76 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
80 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
81 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
82 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
83 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
84 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
85 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
86 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
87 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
88 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
91 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
92 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
93 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
94 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
131 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
134 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
135 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
136 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
137 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
138 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
139 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
140 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
141 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
142 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
143 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
144 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
145 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
146 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
147 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
148 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
149 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
150 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
151 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
152 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
153 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
154 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
155 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
156 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
157 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
158 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
159 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
160 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
161 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
162 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
163 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
164 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
165 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
166 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
167 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
168 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
169 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
170 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
171 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
172 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
180 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
181 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
182 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
183 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
184 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
186 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
187 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
188 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
189 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
190 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
191 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
192 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
193 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.24
Metatranscriptomes 1
Isolates 1.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.26
Nodule 0
Rhizoplane 0.25
Rhizosphere 88.97
Stem 0
Stem Tuber 0
Unclassified 6.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10011940 3300001990 Bacteria 2837
2 JGI24735J21928_10000001 3300002067 Bacteria 650042
3 JGI25162J39368_1000062 3300002737 Bacteria 135587
4 JGI25162J39368_1000927 3300002737 Bacteria 18836
5 JGI25164J39214_1000935 3300002772 Bacteria 9516
6 JGI25165J46597_1000665 3300003214 Bacteria 27746
7 rootH1_10019044 3300003316 Bacteria 8683
8 rootH2_10000192 3300003320 Bacteria 217588
9 rootH2_10006878 3300003320 Bacteria 66386
10 rootH2_10022620 3300003320 Bacteria 40599
11 rootH2_10031657 3300003320 Bacteria 19862
12 rootH2_10051191 3300003320 Bacteria 2407
13 rootL2_10007096 3300003322 Bacteria 8232
14 rootL2_10131204 3300003322 Bacteria 7820
15 rootL2_10152218 3300003322 Bacteria 3967
16 rootH1_10001370 3300003323 Bacteria 113238
17 rootH1_10001371 3300003323 Bacteria 3148
18 rootH1_10003442 3300003323 Bacteria 125253
19 rootH1_10036757 3300003323 Bacteria 18703
20 rootH1_10071583 3300003323 Bacteria 11936
21 Ga0065712_10092291 3300005290 Unclassified 2310
22 Ga0070658_10036830 3300005327 Bacteria 3943
23 Ga0070658_10061301 3300005327 Bacteria 3064
24 Ga0070658_10130094 3300005327 Bacteria 2097
25 Ga0070676_10000108 3300005328 Bacteria 30064
26 Ga0070676_10000150 3300005328 Bacteria 27638
27 Ga0070676_10049836 3300005328 Bacteria 2453
28 Ga0070683_100008106 3300005329 Bacteria 8922
29 Ga0070683_100035186 3300005329 Bacteria 4578
30 Ga0070670_100025018 3300005331 Bacteria 5136
31 Ga0068869_100109150 3300005334 Bacteria 2103
32 Ga0070666_10000026 3300005335 Bacteria 152379
33 Ga0070666_10010603 3300005335 Bacteria 5766
34 Ga0070680_100026739 3300005336 Bacteria 4615
35 Ga0070682_100000066 3300005337 Bacteria 98643
36 Ga0068868_100003552 3300005338 Bacteria 10865
37 Ga0068868_100098157 3300005338 Unclassified 2368
38 Ga0070660_100004213 3300005339 Bacteria 9926
39 Ga0070660_100041766 3300005339 Bacteria 3497
40 Ga0070689_100005935 3300005340 Bacteria 8406
41 Ga0070689_100067997 3300005340 Bacteria 2778
42 Ga0070661_100146590 3300005344 Unclassified 1782
43 Ga0070669_100023192 3300005353 Bacteria 4443
44 Ga0070671_100002441 3300005355 Bacteria 14372
45 Ga0070671_100038825 3300005355 Unclassified 3952
46 Ga0070673_100019171 3300005364 Bacteria 4908
47 Ga0070667_100000894 3300005367 Bacteria 27577
48 Ga0070678_100001940 3300005456 Bacteria 11158
49 Ga0070662_100000607 3300005457 Bacteria 21886
50 Ga0070681_10098049 3300005458 Bacteria 2877
51 Ga0068867_100000525 3300005459 Bacteria 25456
52 Ga0068867_100001153 3300005459 Bacteria 18065
53 Ga0070679_100000230 3300005530 Bacteria 46120
54 Ga0070679_100011199 3300005530 Bacteria 8547
55 Ga0070679_100028946 3300005530 Bacteria 5464
56 Ga0070679_100113856 3300005530 Bacteria 2690
57 Ga0070679_100133428 3300005530 Unclassified 2464
58 Ga0070684_100001604 3300005535 Bacteria 16332
59 Ga0068853_100007901 3300005539 Bacteria 8530
60 Ga0068853_100013092 3300005539 Bacteria 6767
61 Ga0068853_100036491 3300005539 Bacteria 4181
62 Ga0068853_100069354 3300005539 Unclassified 3066
63 Ga0070672_100040781 3300005543 Bacteria 3565
64 Ga0070672_100131581 3300005543 Bacteria 2057
65 Ga0070665_100000010 3300005548 Bacteria 529545
66 Ga0070665_100001927 3300005548 Bacteria 23388
67 Ga0068855_100007002 3300005563 Bacteria 13692
68 Ga0068855_100009017 3300005563 Bacteria 12054
69 Ga0068855_100030419 3300005563 Bacteria 6459
70 Ga0068855_100047339 3300005563 Bacteria 5080
71 Ga0068855_100061291 3300005563 Bacteria 4396
72 Ga0068855_100101226 3300005563 Bacteria 3317
73 Ga0068857_100002621 3300005577 Bacteria 14769
74 Ga0068856_100052627 3300005614 Bacteria 4016
75 Ga0068852_100000499 3300005616 Bacteria 25732
76 Ga0068852_100000893 3300005616 Bacteria 19709
77 Ga0068852_100016884 3300005616 Bacteria 5710
78 Ga0068852_100039251 3300005616 Bacteria 3985
79 Ga0068859_100000100 3300005617 Bacteria 79844
80 Ga0068864_100001851 3300005618 Bacteria 17413
81 Ga0068864_100033126 3300005618 Bacteria 4392
82 Ga0068864_100065460 3300005618 Bacteria 3153
83 Ga0068861_100000501 3300005719 Bacteria 22823
84 Ga0068861_100008288 3300005719 Bacteria 7149
85 Ga0068851_10000681 3300005834 Bacteria 14462
86 Ga0068870_10018897 3300005840 Bacteria 3336
87 Ga0068863_100003897 3300005841 Bacteria 14739
88 Ga0068863_100007660 3300005841 Bacteria 10562
89 Ga0068858_100000290 3300005842 Bacteria 54287
90 Ga0068858_100010934 3300005842 Bacteria 8577
91 Ga0068860_100001998 3300005843 Bacteria 21511
92 Ga0068860_100003795 3300005843 Bacteria 15546
93 Ga0068860_100066544 3300005843 Bacteria 3423
94 Ga0097621_100000007 3300006237 Bacteria 131146
95 Ga0097621_100151693 3300006237 Bacteria 1987
96 Ga0068871_100000024 3300006358 Bacteria 82027
97 Ga0068871_100020197 3300006358 Bacteria 5099
98 Ga0068871_100033825 3300006358 Bacteria 4050
99 Ga0075428_100017095 3300006844 Bacteria 8013
100 Ga0068865_100000071 3300006881 Bacteria 53613
101 Ga0068865_100003903 3300006881 Bacteria 8946
102 Ga0097620_100000100 3300006931 Bacteria 79844
103 Ga0105240_10000103 3300009093 Bacteria 172981
104 Ga0105240_10000140 3300009093 Bacteria 148591
105 Ga0105240_10000419 3300009093 Bacteria 78633
106 Ga0105240_10004039 3300009093 Bacteria 22585
107 Ga0105240_10016896 3300009093 Bacteria 9863
108 Ga0105240_10094148 3300009093 Unclassified 3655
109 Ga0105240_10108636 3300009093 Bacteria 3360
110 Ga0105240_10129436 3300009093 Unclassified 3029
111 Ga0105240_10152560 3300009093 Bacteria 2750
112 Ga0111539_10014926 3300009094 Bacteria 9681
113 Ga0105243_10135635 3300009148 Bacteria 2093
114 Ga0105241_10000093 3300009174 Bacteria 67365
115 Ga0105241_10000661 3300009174 Bacteria 25857
116 Ga0105241_10001523 3300009174 Bacteria 17761
117 Ga0105241_10081285 3300009174 Bacteria 2538
118 Ga0105242_10035183 3300009176 Bacteria 4016
119 Ga0105248_10136852 3300009177 Bacteria 2763
120 Ga0105237_10000167 3300009545 Bacteria 92638
121 Ga0105237_10001189 3300009545 Bacteria 34842
122 Ga0105237_10002983 3300009545 Bacteria 20458
123 Ga0105237_10003944 3300009545 Bacteria 17377
124 Ga0105237_10006925 3300009545 Bacteria 12501
125 Ga0105237_10029217 3300009545 Bacteria 5608
126 Ga0105237_10029242 3300009545 Bacteria 5605
127 Ga0105237_10042850 3300009545 Bacteria 4562
128 Ga0105237_10049110 3300009545 Bacteria 4243
129 Ga0105237_10085190 3300009545 Bacteria 3150
130 Ga0105237_10191112 3300009545 Unclassified 2047
131 Ga0105238_10022725 3300009551 Bacteria 6391
132 Ga0105238_10034233 3300009551 Bacteria 5169
133 Ga0105238_10108092 3300009551 Bacteria 2762
134 Ga0105249_10022583 3300009553 Bacteria 5637
135 Ga0105239_10000081 3300010375 Bacteria 133686
136 Ga0105239_10000093 3300010375 Bacteria 125821
137 Ga0105239_10000414 3300010375 Bacteria 62261
138 Ga0105239_10001090 3300010375 Bacteria 37547
139 Ga0105239_10004732 3300010375 Bacteria 16162
140 Ga0105239_10016895 3300010375 Bacteria 8064
141 Ga0105239_10090450 3300010375 Unclassified 3377
142 Ga0105239_10137690 3300010375 Bacteria 2718
143 Ga0105246_10014195 3300011119 Bacteria 5007
144 Ga0157373_10000057 3300013100 Bacteria 99697
145 Ga0157373_10000850 3300013100 Bacteria 23716
146 Ga0157373_10002738 3300013100 Bacteria 13350
147 Ga0157371_10002169 3300013102 Bacteria 19094
148 Ga0157371_10009656 3300013102 Bacteria 7586
149 Ga0157371_10010740 3300013102 Bacteria 7112
150 Ga0157371_10010885 3300013102 Bacteria 7054
151 Ga0157371_10023242 3300013102 Bacteria 4533
152 Ga0157371_10036102 3300013102 Bacteria 3540
153 Ga0157371_10050711 3300013102 Unclassified 2950
154 Ga0157370_10001417 3300013104 Bacteria 29766
155 Ga0157370_10007684 3300013104 Bacteria 11699
156 Ga0157370_10009274 3300013104 Bacteria 10544
157 Ga0157370_10072617 3300013104 Bacteria 3246
158 Ga0157369_10004024 3300013105 Bacteria 17425
159 Ga0157369_10078652 3300013105 Unclassified 3533
160 Ga0157374_10000004 3300013296 Bacteria 759774
161 Ga0157374_10000213 3300013296 Bacteria 53259
162 Ga0157374_10000255 3300013296 Bacteria 49033
163 Ga0157374_10000636 3300013296 Bacteria 30893
164 Ga0157374_10004473 3300013296 Bacteria 11735
165 Ga0157378_10008853 3300013297 Bacteria 8759
166 Ga0157378_10094815 3300013297 Bacteria 2717
167 Ga0163162_10000046 3300013306 Bacteria 126777
168 Ga0163162_10005369 3300013306 Bacteria 12373
169 Ga0163162_10008084 3300013306 Bacteria 10267
170 Ga0163162_10066093 3300013306 Bacteria 3665
171 Ga0157372_10000015 3300013307 Bacteria 225365
172 Ga0157372_10000052 3300013307 Bacteria 135497
173 Ga0157372_10001877 3300013307 Bacteria 22772
174 Ga0157372_10007110 3300013307 Bacteria 11928
175 Ga0157372_10007435 3300013307 Bacteria 11649
176 Ga0157372_10016983 3300013307 Bacteria 7812
177 Ga0157372_10026104 3300013307 Bacteria 6356
178 Ga0157372_10039332 3300013307 Bacteria 5219
179 Ga0157375_10001044 3300013308 Bacteria 23912
180 Ga0157375_10004361 3300013308 Bacteria 12279
181 Ga0157375_10005793 3300013308 Bacteria 10749
182 Ga0163163_10000422 3300014325 Bacteria 39158
183 Ga0163163_10129122 3300014325 Unclassified 2567
184 Ga0157380_10004437 3300014326 Bacteria 9720
185 Ga0157377_10006361 3300014745 Bacteria 5627
186 Ga0157377_10009723 3300014745 Bacteria 4732
187 Ga0157379_10003224 3300014968 Bacteria 13817
188 Ga0157379_10057548 3300014968 Bacteria 3474
189 Ga0157376_10001507 3300014969 Bacteria 15379
190 Ga0157376_10002370 3300014969 Bacteria 12719
191 Ga0157376_10008088 3300014969 Bacteria 7558
192 Ga0163161_10001069 3300017792 Bacteria 20761
193 Ga0163161_10012452 3300017792 Bacteria 5906
194 Ga0197907_10717212 3300020069 Bacteria 2382
195 Ga0206352_10745394 3300020078 Bacteria 2602
196 Ga0206352_10817185 3300020078 Bacteria 1961
197 Ga0154015_1262839 3300020610 Unclassified 1539
198 Ga0209563_103831 3300025230 Bacteria 3012
199 Ga0207427_100187 3300025231 Bacteria 63218
200 Ga0209437_100008 3300025233 Bacteria 921142
201 Ga0209437_100177 3300025233 Bacteria 135759
202 Ga0209026_1000325 3300025250 Bacteria 49667
203 Ga0209233_1000024 3300025261 Bacteria 695418
204 Ga0207656_10025091 3300025321 Unclassified 2418
205 Ga0207680_10000040 3300025903 Bacteria 71091
206 Ga0207680_10045028 3300025903 Bacteria 2599
207 Ga0207647_10000021 3300025904 Bacteria 121592
208 Ga0207647_10013759 3300025904 Bacteria 5603
209 Ga0207647_10028559 3300025904 Bacteria 3621
210 Ga0207645_10000091 3300025907 Bacteria 65333
211 Ga0207645_10000546 3300025907 Bacteria 31352
212 Ga0207705_10006598 3300025909 Bacteria 8590
213 Ga0207705_10027524 3300025909 Bacteria 4054
214 Ga0207705_10035471 3300025909 Bacteria 3568
215 Ga0207654_10000928 3300025911 Bacteria 16199
216 Ga0207654_10003972 3300025911 Bacteria 7450
217 Ga0207654_10042147 3300025911 Bacteria 2582
218 Ga0207695_10000019 3300025913 Bacteria 732137
219 Ga0207695_10000027 3300025913 Bacteria 612456
220 Ga0207695_10000076 3300025913 Bacteria 307969
221 Ga0207695_10000608 3300025913 Bacteria 71944
222 Ga0207695_10001417 3300025913 Bacteria 40394
223 Ga0207695_10009876 3300025913 Bacteria 11728
224 Ga0207695_10012433 3300025913 Bacteria 10220
225 Ga0207695_10045296 3300025913 Bacteria 4670
226 Ga0207695_10070461 3300025913 Unclassified 3574
227 Ga0207671_10000228 3300025914 Bacteria 84575
228 Ga0207671_10000603 3300025914 Bacteria 47713
229 Ga0207671_10001659 3300025914 Viruses 25316
230 Ga0207671_10004272 3300025914 Bacteria 13746
231 Ga0207671_10007487 3300025914 Bacteria 9469
232 Ga0207671_10018185 3300025914 Bacteria 5401
233 Ga0207671_10020825 3300025914 Bacteria 4988
234 Ga0207671_10027493 3300025914 Bacteria 4253
235 Ga0207657_10049576 3300025919 Bacteria 3657
236 Ga0207652_10000108 3300025921 Bacteria 90141
237 Ga0207652_10000171 3300025921 Bacteria 69902
238 Ga0207652_10002488 3300025921 Bacteria 15514
239 Ga0207652_10012047 3300025921 Bacteria 6979
240 Ga0207652_10025045 3300025921 Bacteria 4957
241 Ga0207694_10038082 3300025924 Unclassified 3697
242 Ga0207650_10015149 3300025925 Bacteria 5366
243 Ga0207690_10027733 3300025932 Unclassified 3581
244 Ga0207706_10000088 3300025933 Bacteria 94903
245 Ga0207686_10106545 3300025934 Bacteria 1882
246 Ga0207709_10009676 3300025935 Bacteria 5310
247 Ga0207670_10038304 3300025936 Bacteria 3130
248 Ga0207704_10000309 3300025938 Bacteria 22890
249 Ga0207704_10000454 3300025938 Bacteria 18318
250 Ga0207691_10000012 3300025940 Bacteria 147942
251 Ga0207691_10232835 3300025940 Bacteria 1595
252 Ga0207689_10031030 3300025942 Bacteria 4452
253 Ga0207689_10055018 3300025942 Bacteria 3276
254 Ga0207661_10027815 3300025944 Bacteria 4324
255 Ga0207661_10039416 3300025944 Bacteria 3708
256 Ga0207667_10000230 3300025949 Bacteria 77858
257 Ga0207667_10009589 3300025949 Bacteria 11393
258 Ga0207667_10011151 3300025949 Bacteria 10462
259 Ga0207667_10050110 3300025949 Bacteria 4406
260 Ga0207667_10050756 3300025949 Bacteria 4376
261 Ga0207667_10064846 3300025949 Unclassified 3811
262 Ga0207667_10066936 3300025949 Bacteria 3743
263 Ga0207651_10002136 3300025960 Bacteria 9344
264 Ga0207651_10006975 3300025960 Bacteria 5980
265 Ga0207651_10086103 3300025960 Bacteria 2282
266 Ga0207668_10000435 3300025972 Bacteria 26330
267 Ga0207668_10084157 3300025972 Bacteria 2317
268 Ga0207658_10000524 3300025986 Bacteria 35001
269 Ga0207677_10004477 3300026023 Bacteria 7508
270 Ga0207677_10132521 3300026023 Bacteria 1895
271 Ga0207703_10001271 3300026035 Bacteria 23455
272 Ga0207639_10001672 3300026041 Bacteria 14958
273 Ga0207639_10009531 3300026041 Bacteria 6700
274 Ga0207639_10017832 3300026041 Bacteria 5035
275 Ga0207678_10027349 3300026067 Unclassified 4975
276 Ga0207641_10000038 3300026088 Bacteria 205418
277 Ga0207641_10002540 3300026088 Bacteria 16792
278 Ga0207641_10021610 3300026088 Bacteria 5287
279 Ga0207648_10000188 3300026089 Bacteria 64863
280 Ga0207648_10003751 3300026089 Bacteria 15880
281 Ga0207676_10001663 3300026095 Bacteria 16389
282 Ga0207676_10010599 3300026095 Bacteria 6570
283 Ga0207674_10024078 3300026116 Bacteria 6511
284 Ga0207674_10032188 3300026116 Bacteria 5501
285 Ga0207674_10055160 3300026116 Bacteria 4042
286 Ga0207675_100003927 3300026118 Bacteria 14436
287 Ga0207675_100015242 3300026118 Bacteria 7169
288 Ga0207683_10004244 3300026121 Bacteria 12369
289 Ga0207698_10003367 3300026142 Bacteria 9628
290 Ga0207698_10004627 3300026142 Bacteria 8405
291 Ga0207698_10008068 3300026142 Bacteria 6640
292 Ga0207698_10049359 3300026142 Bacteria 3202
293 Ga0207698_10204516 3300026142 Bacteria 1771
294 Ga0207428_10106522 3300027907 Unclassified 2161
295 Ga0268266_10000094 3300028379 Bacteria 190917
296 Ga0268266_10010397 3300028379 Bacteria 8134
297 Ga0268264_10001667 3300028381 Bacteria 20460
298 Ga0268264_10002174 3300028381 Bacteria 17471
299 Ga0268264_10019903 3300028381 Bacteria 5484
300 Ga0265334_10014647 3300028573 Bacteria 3267
301 Ga0307517_10047976 3300028786 Bacteria 4409
302 Ga0307515_10000072 3300028794 Bacteria 237798
303 Ga0307515_10000912 3300028794 Bacteria 67995
304 Ga0307511_10000137 3300030521 Bacteria 67766
305 Ga0307509_10034962 3300031507 Bacteria 5519
306 Ga0265313_10012009 3300031595 Bacteria 5338
307 Ga0307410_10109330 3300031852 Bacteria 1998
308 Ga0307416_100154761 3300032002 Bacteria 2109
309 Ga0307507_10000010 3300033179 Bacteria 265208
310 Ga0307510_10005351 3300033180 Bacteria 15281
311 Ga0307510_10026740 3300033180 Bacteria 6624
312 Ga0373927_0019583 3300035695 Bacteria 4437
313 Ga0395899_0000002 3300037312 Bacteria 1324310
314 Ga0395899_0000037 3300037312 Bacteria 280224
315 Ga0395899_0000181 3300037312 Bacteria 92672
316 Ga0395899_0004855 3300037312 Bacteria 10474
317 Ga0395899_0023670 3300037312 Unclassified 4648
318 Ga0395899_0060351 3300037312 Bacteria 2794
319 Ga0395899_0066944 3300037312 Bacteria 2636
320 Ga0395900_0000420 3300037418 Bacteria 61258
321 Ga0395900_0001542 3300037418 Bacteria 27361
322 Ga0395900_0052623 3300037418 Bacteria 4191
323 Ga0395900_0124473 3300037418 Bacteria 2644
324 Ga0395898_0002699 3300037466 Bacteria 20525
325 Ga0395898_0078485 3300037466 Bacteria 3186
326 Ga0395905_0000303 3300037471 Bacteria 71615
327 Ga0395905_0060864 3300037471 Bacteria 3531
328 Ga0395901_0028397 3300038443 Bacteria 5753
329 Ga0395901_0032285 3300038443 Bacteria 5402
330 Ga0395901_0084268 3300038443 Bacteria 3322
331 Ga0436361_1137687 3300039447 Bacteria 23236
332 Ga0439439_0010397 3300041406 Unclassified 2224
333 Ga0451577_0003957 3300042876 Bacteria 15983
334 Ga0466961_0045657 3300044693 Unclassified 2803
335 Ga0453684_0011323 3300044712 Bacteria 14994
336 Ga0453684_0013439 3300044712 Bacteria 13293
337 Ga0466959_0007145 3300045049 Bacteria 7817
338 Ga0495650_0001030 3300046471 Bacteria 31336
339 Ga0495585_0000458 3300046492 Bacteria 39008
340 Ga0495596_0021251 3300046500 Bacteria 2651
341 Ga0495606_0000788 3300046507 Bacteria 48492
342 Ga0495610_0000026 3300046512 Bacteria 284737
343 Ga0495610_0001299 3300046512 Bacteria 22264
344 Ga0495631_0011378 3300046518 Bacteria 4377
345 Ga0495652_0088165 3300046529 Bacteria 2544
346 Ga0495633_0004352 3300046558 Bacteria 9043
347 Ga0495611_0000212 3300046648 Bacteria 40937
348 Ga0495625_0000003 3300046660 Bacteria 686847
349 Ga0495625_0018253 3300046660 Bacteria 5482
350 Ga0495625_0033872 3300046660 Bacteria 3773
351 Ga0495661_0000527 3300046665 Bacteria 39504
352 Ga0495661_0003689 3300046665 Bacteria 11246
353 Ga0495661_0016649 3300046665 Bacteria 4867
354 Ga0495649_0000002 3300046694 Bacteria 1093458
355 Ga0495636_0000123 3300047318 Bacteria 32076
356 Ga0495672_0004265 3300047320 Bacteria 11805
357 Ga0495687_001124 3300047443 Bacteria 26001
358 Ga0495687_019291 3300047443 Bacteria 3351
359 Ga0495686_0000372 3300047472 Bacteria 72285
360 Ga0495686_0003222 3300047472 Bacteria 14353
361 Ga0501300_000700 3300049523 Bacteria 5017
362 Ga0501032_0008548 3300049569 Bacteria 7468
363 Ga0501032_0014363 3300049569 Bacteria 5609
364 Ga0501034_0003566 3300049571 Bacteria 17670
365 Ga0501034_0027065 3300049571 Bacteria 5834
366 Ga0501038_0062404 3300049574 Bacteria 3184
367 Ga0501039_0136065 3300049575 Bacteria 1929
368 Ga0501043_0015944 3300049579 Bacteria 5890
369 Ga0501043_0048105 3300049579 Bacteria 3353
370 Ga0501046_0007793 3300049580 Bacteria 9395
371 Ga0501047_0035127 3300049581 Bacteria 4842
372 Ga0501047_0077676 3300049581 Bacteria 3193
373 Ga0501047_0228406 3300049581 Bacteria 1715
374 Ga0501074_0002466 3300049590 Bacteria 12902
375 Ga0501257_013480 3300049686 Bacteria 1874
376 Ga0501225_0000906 3300049705 Bacteria 9219
377 Ga0501080_0049368 3300049742 Bacteria 3916
378 Ga0501264_000217 3300049761 Bacteria 9344
379 Ga0501035_0013957 3300049822 Bacteria 7412
380 Ga0501035_0050923 3300049822 Bacteria 3709
381 Ga0501044_0058569 3300049823 Unclassified 3950
382 Ga0501044_0084153 3300049823 Bacteria 3215
383 Ga0501044_0305256 3300049823 Bacteria 1519
384 Ga0500608_000365 3300053122 Bacteria 17523
385 Ga0500618_000001 3300053125 Bacteria 538477
386 Ga0500568_0001462 3300053139 Bacteria 15143
387 Ga0500616_0005320 3300053153 Bacteria 8774
388 Ga0500616_0027554 3300053153 Bacteria 3136
389 Ga0500622_0019269 3300053156 Unclassified 3624
390 Ga0500624_000746 3300053157 Bacteria 7919
391 Ga0500611_000020 3300053727 Bacteria 105250
392 Ga0466962_0009705 3300061719 Bacteria 4619

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003322 rootL2_10007096 rootL2_100070966 413
2 3300014325 Ga0163163_10129122 Ga0163163_101291222 422
3 3300049581 Ga0501047_0228406 Ga0501047_0228406_391_1692 422
4 3300049823 Ga0501044_0305256 Ga0501044_0305256_169_1485 427
5 3300049579 Ga0501043_0048105 Ga0501043_0048105_557_1906 438
6 3300013307 Ga0157372_10007110 Ga0157372_1000711010 450
7 3300009093 Ga0105240_10000419 Ga0105240_1000041914 457
8 3300010375 Ga0105239_10001090 Ga0105239_1000109026 457
9 3300002737 JGI25162J39368_1000927 JGI25162J39368_100092713 458
10 3300002772 JGI25164J39214_1000935 JGI25164J39214_10009353 458
11 3300003214 JGI25165J46597_1000665 JGI25165J46597_100066517 458
12 3300003323 rootH1_10001370 rootH1_1000137034 458
13 3300025230 Ga0209563_103831 Ga0209563_1038313 458
14 3300025231 Ga0207427_100187 Ga0207427_1001874 458
15 3300025233 Ga0209437_100008 Ga0209437_100008611 458
16 3300025261 Ga0209233_1000024 Ga0209233_100002446 458
17 3300009545 Ga0105237_10002983 Ga0105237_1000298319 460
18 3300010375 Ga0105239_10000093 Ga0105239_1000009327 460
19 3300020069 Ga0197907_10717212 Ga0197907_107172121 460
20 3300020610 Ga0154015_1262839 Ga0154015_12628391 460
21 3300013102 Ga0157371_10002169 Ga0157371_100021693 466
22 3300013102 Ga0157371_10009656 Ga0157371_100096563 466
23 3300013102 Ga0157371_10010885 Ga0157371_100108855 466
24 3300013104 Ga0157370_10001417 Ga0157370_100014179 466
25 3300025909 Ga0207705_10035471 Ga0207705_100354713 466
26 3300049569 Ga0501032_0008548 Ga0501032_0008548_5097_6530 466
27 3300049571 Ga0501034_0003566 Ga0501034_0003566_12345_13778 466
28 3300049580 Ga0501046_0007793 Ga0501046_0007793_7784_9217 466
29 3300049590 Ga0501074_0002466 Ga0501074_0002466_2271_3704 466
30 3300037312 Ga0395899_0000002 Ga0395899_0000002_1101581_1103017 467
31 3300049823 Ga0501044_0084153 Ga0501044_0084153_913_2361 471
32 3300049574 Ga0501038_0062404 Ga0501038_0062404_1138_2622 472
33 3300013296 Ga0157374_10004473 Ga0157374_100044739 475
34 3300033180 Ga0307510_10026740 Ga0307510_100267404 477
35 3300037418 Ga0395900_0124473 Ga0395900_0124473_126_1628 478
36 3300009093 Ga0105240_10152560 Ga0105240_101525602 481
37 3300003320 rootH2_10051191 rootH2_100511912 483
38 3300005530 Ga0070679_100028946 Ga0070679_1000289463 484
39 3300006237 Ga0097621_100151693 Ga0097621_1001516932 484
40 3300006358 Ga0068871_100020197 Ga0068871_1000201972 484
41 3300014969 Ga0157376_10002370 Ga0157376_100023705 484
42 3300044693 Ga0466961_0045657 Ga0466961_0045657_258_1745 484
43 3300045049 Ga0466959_0007145 Ga0466959_0007145_5705_7192 484
44 3300061719 Ga0466962_0009705 Ga0466962_0009705_2766_4253 484
45 iso_pu_bacteria 2919437846 2919441067 484
46 3300003320 rootH2_10006878 rootH2_1000687816 485
47 3300005563 Ga0068855_100009017 Ga0068855_1000090175 485
48 3300009093 Ga0105240_10000103 Ga0105240_1000010368 485
49 3300009174 Ga0105241_10081285 Ga0105241_100812852 485
50 3300009545 Ga0105237_10000167 Ga0105237_1000016730 485
51 3300010375 Ga0105239_10004732 Ga0105239_100047324 485
52 3300025911 Ga0207654_10042147 Ga0207654_100421472 485
53 3300025913 Ga0207695_10000019 Ga0207695_10000019519 485
54 3300025914 Ga0207671_10000603 Ga0207671_1000060311 485
55 3300025949 Ga0207667_10011151 Ga0207667_100111517 485
56 3300028786 Ga0307517_10047976 Ga0307517_100479764 485
57 3300033180 Ga0307510_10005351 Ga0307510_100053516 485
58 3300046518 Ga0495631_0011378 Ga0495631_0011378_164_1666 485
59 3300053122 Ga0500608_000365 Ga0500608_000365_591_2093 485
60 iso_pu_bacteria 2599185184 2599477312 485
61 iso_pu_bacteria 2928078545 2928079229 485
62 iso_pu_bacteria 2928147474 2928148399 485
63 iso_pu_bacteria 2932082852 2932085695 485
64 3300028573 Ga0265334_10014647 Ga0265334_100146472 487
65 3300037312 Ga0395899_0000037 Ga0395899_0000037_36216_37712 487
66 3300049705 Ga0501225_0000906 Ga0501225_0000906_5725_7266 487
67 iso_pu_bacteria 2513020052 2513234939 487
68 3300002737 JGI25162J39368_1000062 JGI25162J39368_100006215 488
69 3300003320 rootH2_10022620 rootH2_100226201 488
70 3300003320 rootH2_10031657 rootH2_1003165711 488
71 3300003322 rootL2_10152218 rootL2_101522184 488
72 3300003323 rootH1_10001371 rootH1_100013712 488
73 3300003323 rootH1_10003442 rootH1_1000344215 488
74 3300003323 rootH1_10071583 rootH1_100715837 488
75 3300005290 Ga0065712_10092291 Ga0065712_100922912 488
76 3300005327 Ga0070658_10036830 Ga0070658_100368303 488
77 3300005327 Ga0070658_10061301 Ga0070658_100613012 488
78 3300005327 Ga0070658_10130094 Ga0070658_101300941 488
79 3300005328 Ga0070676_10000150 Ga0070676_1000015018 488
80 3300005328 Ga0070676_10049836 Ga0070676_100498362 488
81 3300005329 Ga0070683_100008106 Ga0070683_1000081063 488
82 3300005329 Ga0070683_100035186 Ga0070683_1000351862 488
83 3300005331 Ga0070670_100025018 Ga0070670_1000250183 488
84 3300005334 Ga0068869_100109150 Ga0068869_1001091502 488
85 3300005335 Ga0070666_10000026 Ga0070666_1000002618 488
86 3300005335 Ga0070666_10010603 Ga0070666_100106035 488
87 3300005336 Ga0070680_100026739 Ga0070680_1000267393 488
88 3300005337 Ga0070682_100000066 Ga0070682_10000006664 488
89 3300005338 Ga0068868_100003552 Ga0068868_1000035522 488
90 3300005339 Ga0070660_100004213 Ga0070660_1000042139 488
91 3300005340 Ga0070689_100005935 Ga0070689_1000059357 488
92 3300005340 Ga0070689_100067997 Ga0070689_1000679972 488
93 3300005344 Ga0070661_100146590 Ga0070661_1001465902 488
94 3300005353 Ga0070669_100023192 Ga0070669_1000231922 488
95 3300005355 Ga0070671_100038825 Ga0070671_1000388253 488
96 3300005364 Ga0070673_100019171 Ga0070673_1000191713 488
97 3300005367 Ga0070667_100000894 Ga0070667_10000089423 488
98 3300005458 Ga0070681_10098049 Ga0070681_100980492 488
99 3300005459 Ga0068867_100001153 Ga0068867_1000011531 488
100 3300005530 Ga0070679_100000230 Ga0070679_10000023039 488
101 3300005530 Ga0070679_100011199 Ga0070679_1000111998 488
102 3300005530 Ga0070679_100113856 Ga0070679_1001138562 488
103 3300005530 Ga0070679_100133428 Ga0070679_1001334282 488
104 3300005535 Ga0070684_100001604 Ga0070684_1000016042 488
105 3300005539 Ga0068853_100036491 Ga0068853_1000364912 488
106 3300005539 Ga0068853_100069354 Ga0068853_1000693543 488
107 3300005543 Ga0070672_100040781 Ga0070672_1000407813 488
108 3300005543 Ga0070672_100131581 Ga0070672_1001315812 488
109 3300005548 Ga0070665_100001927 Ga0070665_10000192719 488
110 3300005563 Ga0068855_100007002 Ga0068855_1000070024 488
111 3300005563 Ga0068855_100030419 Ga0068855_1000304193 488
112 3300005563 Ga0068855_100047339 Ga0068855_1000473393 488
113 3300005563 Ga0068855_100101226 Ga0068855_1001012262 488
114 3300005577 Ga0068857_100002621 Ga0068857_10000262110 488
115 3300005614 Ga0068856_100052627 Ga0068856_1000526274 488
116 3300005616 Ga0068852_100000499 Ga0068852_1000004995 488
117 3300005616 Ga0068852_100000893 Ga0068852_10000089311 488
118 3300005616 Ga0068852_100016884 Ga0068852_1000168845 488
119 3300005617 Ga0068859_100000100 Ga0068859_10000010026 488
120 3300005618 Ga0068864_100001851 Ga0068864_1000018519 488
121 3300005618 Ga0068864_100033126 Ga0068864_1000331263 488
122 3300005618 Ga0068864_100065460 Ga0068864_1000654602 488
123 3300005719 Ga0068861_100000501 Ga0068861_1000005015 488
124 3300005719 Ga0068861_100008288 Ga0068861_1000082883 488
125 3300005834 Ga0068851_10000681 Ga0068851_1000068110 488
126 3300005840 Ga0068870_10018897 Ga0068870_100188973 488
127 3300005841 Ga0068863_100003897 Ga0068863_10000389712 488
128 3300005841 Ga0068863_100007660 Ga0068863_10000766012 488
129 3300005842 Ga0068858_100000290 Ga0068858_10000029027 488
130 3300005842 Ga0068858_100010934 Ga0068858_1000109346 488
131 3300005843 Ga0068860_100001998 Ga0068860_1000019986 488
132 3300005843 Ga0068860_100003795 Ga0068860_1000037958 488
133 3300005843 Ga0068860_100066544 Ga0068860_1000665442 488
134 3300006358 Ga0068871_100033825 Ga0068871_1000338253 488
135 3300006844 Ga0075428_100017095 Ga0075428_1000170956 488
136 3300006881 Ga0068865_100003903 Ga0068865_1000039035 488
137 3300006931 Ga0097620_100000100 Ga0097620_10000010045 488
138 3300009093 Ga0105240_10000140 Ga0105240_1000014044 488
139 3300009093 Ga0105240_10094148 Ga0105240_100941483 488
140 3300009093 Ga0105240_10108636 Ga0105240_101086362 488
141 3300009093 Ga0105240_10129436 Ga0105240_101294361 488
142 3300009094 Ga0111539_10014926 Ga0111539_100149265 488
143 3300009148 Ga0105243_10135635 Ga0105243_101356351 488
144 3300009174 Ga0105241_10001523 Ga0105241_100015234 488
145 3300009177 Ga0105248_10136852 Ga0105248_101368522 488
146 3300009545 Ga0105237_10001189 Ga0105237_1000118930 488
147 3300009545 Ga0105237_10006925 Ga0105237_100069253 488
148 3300009545 Ga0105237_10029217 Ga0105237_100292173 488
149 3300009545 Ga0105237_10029242 Ga0105237_100292425 488
150 3300009545 Ga0105237_10042850 Ga0105237_100428504 488
151 3300009545 Ga0105237_10049110 Ga0105237_100491102 488
152 3300009545 Ga0105237_10085190 Ga0105237_100851902 488
153 3300009545 Ga0105237_10191112 Ga0105237_101911121 488
154 3300009551 Ga0105238_10022725 Ga0105238_100227255 488
155 3300009551 Ga0105238_10108092 Ga0105238_101080923 488
156 3300009553 Ga0105249_10022583 Ga0105249_100225834 488
157 3300010375 Ga0105239_10000081 Ga0105239_1000008188 488
158 3300010375 Ga0105239_10000414 Ga0105239_1000041431 488
159 3300010375 Ga0105239_10016895 Ga0105239_100168952 488
160 3300010375 Ga0105239_10137690 Ga0105239_101376902 488
161 3300013100 Ga0157373_10000057 Ga0157373_1000005722 488
162 3300013100 Ga0157373_10000850 Ga0157373_1000085015 488
163 3300013100 Ga0157373_10002738 Ga0157373_1000273812 488
164 3300013102 Ga0157371_10010740 Ga0157371_100107403 488
165 3300013102 Ga0157371_10036102 Ga0157371_100361023 488
166 3300013102 Ga0157371_10050711 Ga0157371_100507112 488
167 3300013104 Ga0157370_10007684 Ga0157370_1000768410 488
168 3300013104 Ga0157370_10009274 Ga0157370_1000927410 488
169 3300013105 Ga0157369_10004024 Ga0157369_100040244 488
170 3300013105 Ga0157369_10078652 Ga0157369_100786523 488
171 3300013296 Ga0157374_10000004 Ga0157374_10000004363 488
172 3300013296 Ga0157374_10000636 Ga0157374_100006365 488
173 3300013306 Ga0163162_10005369 Ga0163162_100053698 488
174 3300013306 Ga0163162_10066093 Ga0163162_100660933 488
175 3300013307 Ga0157372_10000015 Ga0157372_1000001544 488
176 3300013307 Ga0157372_10000052 Ga0157372_10000052104 488
177 3300013307 Ga0157372_10007435 Ga0157372_100074358 488
178 3300013307 Ga0157372_10026104 Ga0157372_100261045 488
179 3300013307 Ga0157372_10039332 Ga0157372_100393324 488
180 3300013308 Ga0157375_10001044 Ga0157375_100010445 488
181 3300013308 Ga0157375_10004361 Ga0157375_1000436111 488
182 3300014325 Ga0163163_10000422 Ga0163163_100004229 488
183 3300014326 Ga0157380_10004437 Ga0157380_100044372 488
184 3300014745 Ga0157377_10009723 Ga0157377_100097235 488
185 3300014968 Ga0157379_10003224 Ga0157379_1000322411 488
186 3300014968 Ga0157379_10057548 Ga0157379_100575482 488
187 3300014969 Ga0157376_10001507 Ga0157376_100015073 488
188 3300014969 Ga0157376_10008088 Ga0157376_100080884 488
189 3300017792 Ga0163161_10012452 Ga0163161_100124526 488
190 3300020078 Ga0206352_10745394 Ga0206352_107453943 488
191 3300025233 Ga0209437_100177 Ga0209437_10017715 488
192 3300025250 Ga0209026_1000325 Ga0209026_100032538 488
193 3300025321 Ga0207656_10025091 Ga0207656_100250911 488
194 3300025903 Ga0207680_10000040 Ga0207680_1000004057 488
195 3300025903 Ga0207680_10045028 Ga0207680_100450282 488
196 3300025904 Ga0207647_10013759 Ga0207647_100137594 488
197 3300025904 Ga0207647_10028559 Ga0207647_100285593 488
198 3300025907 Ga0207645_10000546 Ga0207645_1000054611 488
199 3300025909 Ga0207705_10006598 Ga0207705_100065985 488
200 3300025909 Ga0207705_10027524 Ga0207705_100275243 488
201 3300025911 Ga0207654_10000928 Ga0207654_100009289 488
202 3300025913 Ga0207695_10000027 Ga0207695_10000027291 488
203 3300025913 Ga0207695_10000076 Ga0207695_10000076249 488
204 3300025913 Ga0207695_10000608 Ga0207695_1000060835 488
205 3300025913 Ga0207695_10001417 Ga0207695_1000141721 488
206 3300025913 Ga0207695_10045296 Ga0207695_100452961 488
207 3300025913 Ga0207695_10070461 Ga0207695_100704612 488
208 3300025914 Ga0207671_10000228 Ga0207671_1000022864 488
209 3300025914 Ga0207671_10001659 Ga0207671_100016598 488
210 3300025914 Ga0207671_10004272 Ga0207671_100042722 488
211 3300025914 Ga0207671_10007487 Ga0207671_100074874 488
212 3300025914 Ga0207671_10018185 Ga0207671_100181855 488
213 3300025914 Ga0207671_10020825 Ga0207671_100208253 488
214 3300025914 Ga0207671_10027493 Ga0207671_100274933 488
215 3300025919 Ga0207657_10049576 Ga0207657_100495763 488
216 3300025921 Ga0207652_10000108 Ga0207652_1000010865 488
217 3300025921 Ga0207652_10000171 Ga0207652_1000017155 488
218 3300025921 Ga0207652_10002488 Ga0207652_100024888 488
219 3300025921 Ga0207652_10012047 Ga0207652_100120476 488
220 3300025921 Ga0207652_10025045 Ga0207652_100250452 488
221 3300025924 Ga0207694_10038082 Ga0207694_100380822 488
222 3300025925 Ga0207650_10015149 Ga0207650_100151493 488
223 3300025932 Ga0207690_10027733 Ga0207690_100277333 488
224 3300025936 Ga0207670_10038304 Ga0207670_100383042 488
225 3300025938 Ga0207704_10000454 Ga0207704_1000045416 488
226 3300025940 Ga0207691_10000012 Ga0207691_1000001295 488
227 3300025942 Ga0207689_10031030 Ga0207689_100310302 488
228 3300025942 Ga0207689_10055018 Ga0207689_100550182 488
229 3300025944 Ga0207661_10027815 Ga0207661_100278154 488
230 3300025944 Ga0207661_10039416 Ga0207661_100394163 488
231 3300025949 Ga0207667_10000230 Ga0207667_100002304 488
232 3300025949 Ga0207667_10009589 Ga0207667_100095898 488
233 3300025949 Ga0207667_10050756 Ga0207667_100507562 488
234 3300025949 Ga0207667_10064846 Ga0207667_100648461 488
235 3300025949 Ga0207667_10066936 Ga0207667_100669363 488
236 3300025960 Ga0207651_10002136 Ga0207651_100021363 488
237 3300025960 Ga0207651_10006975 Ga0207651_100069755 488
238 3300025972 Ga0207668_10000435 Ga0207668_100004358 488
239 3300025972 Ga0207668_10084157 Ga0207668_100841572 488
240 3300025986 Ga0207658_10000524 Ga0207658_1000052414 488
241 3300026023 Ga0207677_10004477 Ga0207677_100044773 488
242 3300026035 Ga0207703_10001271 Ga0207703_100012719 488
243 3300026041 Ga0207639_10017832 Ga0207639_100178325 488
244 3300026067 Ga0207678_10027349 Ga0207678_100273494 488
245 3300026088 Ga0207641_10000038 Ga0207641_10000038137 488
246 3300026088 Ga0207641_10002540 Ga0207641_100025404 488
247 3300026088 Ga0207641_10021610 Ga0207641_100216103 488
248 3300026089 Ga0207648_10003751 Ga0207648_1000375111 488
249 3300026095 Ga0207676_10001663 Ga0207676_1000166314 488
250 3300026095 Ga0207676_10010599 Ga0207676_100105995 488
251 3300026116 Ga0207674_10024078 Ga0207674_100240782 488
252 3300026116 Ga0207674_10032188 Ga0207674_100321881 488
253 3300026116 Ga0207674_10055160 Ga0207674_100551602 488
254 3300026118 Ga0207675_100003927 Ga0207675_10000392712 488
255 3300026118 Ga0207675_100015242 Ga0207675_1000152425 488
256 3300026142 Ga0207698_10003367 Ga0207698_100033675 488
257 3300026142 Ga0207698_10004627 Ga0207698_100046275 488
258 3300026142 Ga0207698_10049359 Ga0207698_100493592 488
259 3300026142 Ga0207698_10204516 Ga0207698_102045161 488
260 3300027907 Ga0207428_10106522 Ga0207428_101065221 488
261 3300028379 Ga0268266_10010397 Ga0268266_100103972 488
262 3300028381 Ga0268264_10001667 Ga0268264_100016672 488
263 3300028381 Ga0268264_10002174 Ga0268264_1000217415 488
264 3300028381 Ga0268264_10019903 Ga0268264_100199032 488
265 3300028794 Ga0307515_10000072 Ga0307515_10000072119 488
266 3300028794 Ga0307515_10000912 Ga0307515_1000091213 488
267 3300030521 Ga0307511_10000137 Ga0307511_1000013725 488
268 3300031507 Ga0307509_10034962 Ga0307509_100349623 488
269 3300031595 Ga0265313_10012009 Ga0265313_100120094 488
270 3300031852 Ga0307410_10109330 Ga0307410_101093302 488
271 3300032002 Ga0307416_100154761 Ga0307416_1001547611 488
272 3300033179 Ga0307507_10000010 Ga0307507_1000001080 488
273 3300035695 Ga0373927_0019583 Ga0373927_0019583_1032_2540 488
274 3300037312 Ga0395899_0000181 Ga0395899_0000181_34677_36176 488
275 3300037312 Ga0395899_0023670 Ga0395899_0023670_1869_3368 488
276 3300037312 Ga0395899_0060351 Ga0395899_0060351_658_2157 488
277 3300037312 Ga0395899_0066944 Ga0395899_0066944_874_2373 488
278 3300037418 Ga0395900_0000420 Ga0395900_0000420_13590_15089 488
279 3300037418 Ga0395900_0052623 Ga0395900_0052623_674_2173 488
280 3300037466 Ga0395898_0002699 Ga0395898_0002699_3093_4592 488
281 3300037471 Ga0395905_0060864 Ga0395905_0060864_858_2357 488
282 3300038443 Ga0395901_0028397 Ga0395901_0028397_154_1653 488
283 3300038443 Ga0395901_0032285 Ga0395901_0032285_2029_3528 488
284 3300038443 Ga0395901_0084268 Ga0395901_0084268_249_1748 488
285 3300041406 Ga0439439_0010397 Ga0439439_0010397_83_1582 488
286 3300042876 Ga0451577_0003957 Ga0451577_0003957_6478_7989 488
287 3300044712 Ga0453684_0011323 Ga0453684_0011323_13189_14694 488
288 3300044712 Ga0453684_0013439 Ga0453684_0013439_11274_12785 488
289 3300046529 Ga0495652_0088165 Ga0495652_0088165_119_1618 488
290 3300046648 Ga0495611_0000212 Ga0495611_0000212_38170_39669 488
291 3300046660 Ga0495625_0018253 Ga0495625_0018253_1288_2802 488
292 3300046660 Ga0495625_0033872 Ga0495625_0033872_1792_3291 488
293 3300047318 Ga0495636_0000123 Ga0495636_0000123_15594_17093 488
294 3300047320 Ga0495672_0004265 Ga0495672_0004265_836_2341 488
295 3300047472 Ga0495686_0000372 Ga0495686_0000372_20963_22474 488
296 3300049523 Ga0501300_000700 Ga0501300_000700_3366_4877 488
297 3300049569 Ga0501032_0014363 Ga0501032_0014363_1271_2770 488
298 3300049571 Ga0501034_0027065 Ga0501034_0027065_1128_2660 488
299 3300049575 Ga0501039_0136065 Ga0501039_0136065_183_1715 488
300 3300049579 Ga0501043_0015944 Ga0501043_0015944_4069_5601 488
301 3300049581 Ga0501047_0035127 Ga0501047_0035127_1974_3506 488
302 3300049581 Ga0501047_0077676 Ga0501047_0077676_1569_3083 488
303 3300049686 Ga0501257_013480 Ga0501257_013480_203_1795 488
304 3300049742 Ga0501080_0049368 Ga0501080_0049368_166_1665 488
305 3300049761 Ga0501264_000217 Ga0501264_000217_1962_3473 488
306 3300049822 Ga0501035_0013957 Ga0501035_0013957_1148_2662 488
307 3300049822 Ga0501035_0050923 Ga0501035_0050923_1210_2742 488
308 3300049823 Ga0501044_0058569 Ga0501044_0058569_1768_3291 488
309 3300053125 Ga0500618_000001 Ga0500618_000001_368289_369788 488
310 3300053139 Ga0500568_0001462 Ga0500568_0001462_6821_8323 488
311 3300053153 Ga0500616_0005320 Ga0500616_0005320_7091_8593 488
312 3300053157 Ga0500624_000746 Ga0500624_000746_4519_6018 488
313 3300053727 Ga0500611_000020 Ga0500611_000020_28913_30415 488
314 iso_pu_bacteria 2738541278 2738726545 488
315 3300001990 JGI24737J22298_10011940 JGI24737J22298_100119403 489
316 3300002067 JGI24735J21928_10000001 JGI24735J21928_10000001310 489
317 3300003316 rootH1_10019044 rootH1_100190443 489
318 3300003320 rootH2_10000192 rootH2_1000019280 489
319 3300003322 rootL2_10131204 rootL2_101312045 489
320 3300003323 rootH1_10036757 rootH1_100367578 489
321 3300005328 Ga0070676_10000108 Ga0070676_1000010810 489
322 3300005338 Ga0068868_100098157 Ga0068868_1000981572 489
323 3300005339 Ga0070660_100041766 Ga0070660_1000417663 489
324 3300005355 Ga0070671_100002441 Ga0070671_1000024419 489
325 3300005456 Ga0070678_100001940 Ga0070678_1000019409 489
326 3300005457 Ga0070662_100000607 Ga0070662_10000060713 489
327 3300005459 Ga0068867_100000525 Ga0068867_10000052512 489
328 3300005539 Ga0068853_100007901 Ga0068853_1000079013 489
329 3300005539 Ga0068853_100013092 Ga0068853_1000130924 489
330 3300005548 Ga0070665_100000010 Ga0070665_100000010127 489
331 3300005563 Ga0068855_100061291 Ga0068855_1000612914 489
332 3300005616 Ga0068852_100039251 Ga0068852_1000392512 489
333 3300006237 Ga0097621_100000007 Ga0097621_10000000791 489
334 3300006358 Ga0068871_100000024 Ga0068871_10000002434 489
335 3300006881 Ga0068865_100000071 Ga0068865_10000007111 489
336 3300009093 Ga0105240_10004039 Ga0105240_100040396 489
337 3300009093 Ga0105240_10016896 Ga0105240_100168968 489
338 3300009174 Ga0105241_10000093 Ga0105241_1000009349 489
339 3300009174 Ga0105241_10000661 Ga0105241_100006613 489
340 3300009176 Ga0105242_10035183 Ga0105242_100351834 489
341 3300009545 Ga0105237_10003944 Ga0105237_1000394414 489
342 3300009551 Ga0105238_10034233 Ga0105238_100342332 489
343 3300010375 Ga0105239_10090450 Ga0105239_100904502 489
344 3300011119 Ga0105246_10014195 Ga0105246_100141953 489
345 3300013102 Ga0157371_10023242 Ga0157371_100232422 489
346 3300013104 Ga0157370_10072617 Ga0157370_100726172 489
347 3300013296 Ga0157374_10000213 Ga0157374_1000021345 489
348 3300013296 Ga0157374_10000255 Ga0157374_100002554 489
349 3300013297 Ga0157378_10008853 Ga0157378_100088535 489
350 3300013297 Ga0157378_10094815 Ga0157378_100948151 489
351 3300013306 Ga0163162_10000046 Ga0163162_1000004622 489
352 3300013306 Ga0163162_10008084 Ga0163162_1000808410 489
353 3300013307 Ga0157372_10001877 Ga0157372_1000187717 489
354 3300013307 Ga0157372_10016983 Ga0157372_100169833 489
355 3300013308 Ga0157375_10005793 Ga0157375_100057934 489
356 3300014745 Ga0157377_10006361 Ga0157377_100063615 489
357 3300017792 Ga0163161_10001069 Ga0163161_100010692 489
358 3300020078 Ga0206352_10817185 Ga0206352_108171852 489
359 3300025904 Ga0207647_10000021 Ga0207647_1000002159 489
360 3300025907 Ga0207645_10000091 Ga0207645_1000009118 489
361 3300025911 Ga0207654_10003972 Ga0207654_100039726 489
362 3300025913 Ga0207695_10009876 Ga0207695_1000987610 489
363 3300025913 Ga0207695_10012433 Ga0207695_100124336 489
364 3300025933 Ga0207706_10000088 Ga0207706_1000008833 489
365 3300025934 Ga0207686_10106545 Ga0207686_101065452 489
366 3300025935 Ga0207709_10009676 Ga0207709_100096764 489
367 3300025938 Ga0207704_10000309 Ga0207704_1000030911 489
368 3300025940 Ga0207691_10232835 Ga0207691_102328351 489
369 3300025949 Ga0207667_10050110 Ga0207667_100501104 489
370 3300025960 Ga0207651_10086103 Ga0207651_100861031 489
371 3300026023 Ga0207677_10132521 Ga0207677_101325211 489
372 3300026041 Ga0207639_10001672 Ga0207639_100016726 489
373 3300026041 Ga0207639_10009531 Ga0207639_100095314 489
374 3300026089 Ga0207648_10000188 Ga0207648_1000018813 489
375 3300026121 Ga0207683_10004244 Ga0207683_100042443 489
376 3300026142 Ga0207698_10008068 Ga0207698_100080682 489
377 3300028379 Ga0268266_10000094 Ga0268266_10000094127 489
378 3300037312 Ga0395899_0004855 Ga0395899_0004855_4318_5820 489
379 3300037418 Ga0395900_0001542 Ga0395900_0001542_11429_12931 489
380 3300037466 Ga0395898_0078485 Ga0395898_0078485_518_2020 489
381 3300037471 Ga0395905_0000303 Ga0395905_0000303_61518_63020 489
382 3300039447 Ga0436361_1137687 Ga0436361_1137687_5938_7440 489
383 3300046471 Ga0495650_0001030 Ga0495650_0001030_17068_18570 489
384 3300046492 Ga0495585_0000458 Ga0495585_0000458_14282_15784 489
385 3300046500 Ga0495596_0021251 Ga0495596_0021251_456_1958 489
386 3300046507 Ga0495606_0000788 Ga0495606_0000788_43836_45338 489
387 3300046512 Ga0495610_0000026 Ga0495610_0000026_172976_174478 489
388 3300046512 Ga0495610_0001299 Ga0495610_0001299_87_1589 489
389 3300046558 Ga0495633_0004352 Ga0495633_0004352_440_1942 489
390 3300046660 Ga0495625_0000003 Ga0495625_0000003_253409_254911 489
391 3300046665 Ga0495661_0000527 Ga0495661_0000527_7417_8919 489
392 3300046665 Ga0495661_0003689 Ga0495661_0003689_1880_3382 489
393 3300046665 Ga0495661_0016649 Ga0495661_0016649_1292_2794 489
394 3300046694 Ga0495649_0000002 Ga0495649_0000002_752082_753584 489
395 3300047443 Ga0495687_001124 Ga0495687_001124_15414_16916 489
396 3300047443 Ga0495687_019291 Ga0495687_019291_1214_2716 489
397 3300047472 Ga0495686_0003222 Ga0495686_0003222_12681_14228 489
398 3300053153 Ga0500616_0027554 Ga0500616_0027554_1363_2880 489
399 3300053156 Ga0500622_0019269 Ga0500622_0019269_377_1891 489

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02310

B12-binding

B12 binding domain

46

161

0.9

PF04055

Radical_SAM

Radical SAM superfamily

228

393

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6b4c-assembly8.cif.gz_H structure of viperin from trichoderma virens 0.7976 192 343
6b4c-assembly11.cif.gz_K structure of viperin from trichoderma virens 0.7926 214 344
6b4c-assembly1.cif.gz_A structure of viperin from trichoderma virens 0.7799 192 344
6wte-assembly2.cif.gz_B structure of radical s-adenosylmethionine methyltransferase, tsrm, from kitasatospora setae with cobalamin and [4fe-4s] cluster bound 0.7758 1 393
6b4c-assembly10.cif.gz_J structure of viperin from trichoderma virens 0.7755 192 344
ID Description Score Start End Superfamily
af_P96395_5_123_3.40.50.280 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin-binding domain 0.8628 46 136 3.40.50.280
af_Q4DT80_50_172_3.40.50.12160 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylthiotransferase, N-terminal domain 0.7211 5 134 3.40.50.12160
af_Q58882_6_144_3.40.50.280 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin-binding domain 0.7186 5 144 3.40.50.280
af_Q95PI2_664_782_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.7119 2 96 3.40.50.2300
af_Q54SP4_555_700_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.7115 2 133 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A4Q5WQB2-F1-model_v4 Radical SAM protein 0.9796 1 87
AF-A0A4Q5WQB2-F1-model_v4 Radical SAM protein 0.9687 1 87
AF-A0A0R2VAK2-F1-model_v4 Radical SAM protein 0.9285 2 418 GO:0003824
GO:0031419
GO:0046872
GO:0051539
AF-A0A2V8JYH3-F1-model_v4 Radical SAM protein 0.9221 4 489 GO:0003824
GO:0031419
GO:0046872
GO:0051539
AF-A0A383CMH5-F1-model_v4 B12-binding domain-containing protein 0.9177 2 171 GO:0031419
GO:0046872
GO:0051536

Feature Viewer

pLDDT pTM Quality
84.56 0.84 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map