F433288

General Info

Members Datasets Scaffolds Average Seq Length
395 237 330 227

Family's Representative Sequence

Representative Sequence 3300046452|Ga0495617_000078|Ga0495617_000078_49083_49853
Length 256
Sequence MAAKMTELSYLCQIAVPGLRLKSGFGLQQGPIMRILVIEDEPKAGEYVRTGLTESGYVVDLARNGKDGLHMAHEFRYDLILLDVMMPEMDGWEVMRQLDKSAGVPVLFLTARGTLEDKLKGLELGAEDYLVKPFSFAELLARIRVALRRGSQQRVDDMLRIADLEIDVPKRRVVRGEQRITLTNKEFALLQFFVQNQGQVLSRSLIASRVWDMNFDSDTNVVDVAVRRLRQKIDEPFATRLIQTVHGVGYRCEAGA

Samples

Sample ID Description Type Environment
1 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
2 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
3 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
4 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
5 2511231025 Pantoea sp. YR343 Isolate Rhizosphere
6 2511231035 Pantoea sp. GM01 Isolate Rhizosphere
7 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
8 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
9 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
10 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
11 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
12 2671180115 Cedecea sp. NFIX57 Isolate Rhizoplane
13 2738541297 Duganella sp. GV083 Isolate Unclassified
14 2738541357 Duganella sp. GV053 Isolate Unclassified
15 2738543003 Duganella sp. GV066 Isolate Unclassified
16 2738543026 Duganella sp. GV089 Isolate Unclassified
17 2738543029 Duganella sp. GV039 Isolate Unclassified
18 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
19 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
20 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
21 2818991436 Collimonas arenae 515 Isolate Unclassified
22 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
23 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
24 2821131069 Duganella sp. 1224 Isolate Unclassified
25 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
26 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
27 2855730933 Achromobacter sp. HZ28 Isolate Nodule
28 2855767633 Achromobacter sp. HZ34 Isolate Nodule
29 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
30 2904504865 Serratia marcescens 1822 Isolate Unclassified
31 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
32 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
33 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
34 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
35 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
36 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
37 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
38 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
39 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
40 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
41 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
42 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
43 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
44 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
45 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
46 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
47 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
48 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
49 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
50 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
51 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
52 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
53 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
54 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
55 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
56 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
57 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
58 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
59 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
60 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
61 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
62 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
63 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
64 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
65 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
66 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
67 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
68 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
69 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
70 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
71 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
72 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
73 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
74 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
75 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
76 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
77 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
78 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
79 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
80 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
81 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
82 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
83 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
84 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
85 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
86 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
87 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
88 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
95 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
96 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
98 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
99 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
100 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
102 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
103 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
104 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
105 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
106 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
107 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
115 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
119 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
120 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
121 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
122 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
123 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
124 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
125 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
126 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
127 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
128 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
129 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
130 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
131 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
132 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
133 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
134 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
135 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
136 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
137 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
138 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
139 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
140 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
141 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
142 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
143 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
144 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
145 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
146 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
147 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
148 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
149 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
150 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
151 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
152 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
153 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
154 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
155 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
156 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
157 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
158 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
159 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
160 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
161 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
162 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
163 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
164 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
165 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
166 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
167 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
168 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
169 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
170 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
171 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
172 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
173 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
174 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
175 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
176 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
177 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
178 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
179 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
180 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
181 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
182 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
183 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
184 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
185 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
186 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
187 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
188 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
189 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
190 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
191 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
192 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
193 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
194 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
195 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
196 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
197 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
198 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
199 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
200 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
201 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
202 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
203 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
204 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
205 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
206 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
207 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
208 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
209 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
210 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
211 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
212 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
213 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
214 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
215 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
216 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
217 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
218 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
219 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
220 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
221 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
222 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
223 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
224 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
225 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
226 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
227 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
228 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
229 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
230 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
231 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
232 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
233 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
234 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
235 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule
236 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere
237 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.37
Metatranscriptomes 0
Isolates 10.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.7
Nodule 2.53
Rhizoplane 3.8
Rhizosphere 64.05
Stem 0
Stem Tuber 0
Unclassified 13.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000510 3300002704 Bacteria 9275
2 JGI25156J39149_1001594 3300002705 Bacteria 9275
3 JGI25154J39366_1001299 3300002738 Bacteria 9275
4 JGI25157J39369_1001824 3300002741 Bacteria 6740
5 JGI25159J45721_1002353 3300002987 Bacteria 7221
6 JGI25151J46595_10000639 3300003187 Bacteria 30118
7 JGI25151J46595_10000769 3300003187 Bacteria 25987
8 rootH1_10087595 3300003323 Bacteria 5586
9 Ga0055538_1000002 3300003751 Bacteria 999437
10 Ga0055539_1000002 3300003752 Bacteria 999437
11 Ga0055533_1000004 3300003756 Bacteria 999437
12 Ga0055532_1000749 3300003758 Bacteria 11714
13 Ga0055525_1000002 3300003759 Bacteria 999437
14 Ga0055535_1003618 3300003761 Bacteria 4238
15 Ga0055526_1002195 3300003771 Bacteria 13374
16 Ga0055537_1000106 3300003773 Bacteria 62947
17 Ga0055524_1016527 3300003775 Bacteria 2642
18 Ga0055534_1000381 3300003784 Bacteria 27709
19 Ga0055528_1000011 3300003790 Bacteria 218512
20 Ga0055541_1000002 3300003841 Bacteria 896405
21 Ga0058692_1001343 3300003856 Bacteria 9180
22 Ga0058692_1003420 3300003856 Bacteria 4896
23 Ga0065165_1000007 3300005262 Bacteria 337871
24 Ga0065714_10099989 3300005288 Bacteria 1674
25 Ga0065714_10117672 3300005288 Bacteria 1388
26 Ga0070666_10024613 3300005335 Bacteria 3923
27 Ga0070673_100178811 3300005364 Bacteria 1815
28 Ga0070667_100038491 3300005367 Bacteria 4009
29 Ga0070663_100040737 3300005455 Bacteria 3254
30 Ga0068867_100091329 3300005459 Bacteria 2311
31 Ga0070679_100541731 3300005530 Bacteria 1107
32 Ga0070702_100058739 3300005615 Bacteria 2230
33 Ga0068862_101025751 3300005844 Bacteria 817
34 Ga0075365_10045377 3300006038 Bacteria 2883
35 Ga0075364_10158492 3300006051 Bacteria 1527
36 Ga0075366_10000539 3300006195 Bacteria 17631
37 Ga0075366_10001194 3300006195 Bacteria 12874
38 Ga0075370_10007256 3300006353 Bacteria 5639
39 Ga0099823_1020346 3300006944 Bacteria 6276
40 Ga0079104_1000150 3300006946 Bacteria 97808
41 Ga0079104_1010111 3300006946 Bacteria 3135
42 Ga0105251_10000031 3300009011 Bacteria 124114
43 Ga0105244_10000008 3300009036 Bacteria 302297
44 Ga0105244_10003474 3300009036 Bacteria 11214
45 Ga0105244_10121348 3300009036 Bacteria 1265
46 Ga0105250_10000011 3300009092 Bacteria 276144
47 Ga0105243_10010654 3300009148 Bacteria 6973
48 Ga0105248_10044764 3300009177 Bacteria 4964
49 Ga0105238_10295721 3300009551 Bacteria 1602
50 Ga0105238_10323325 3300009551 Bacteria 1529
51 Ga0105239_10055809 3300010375 Bacteria 4332
52 Ga0105246_10006144 3300011119 Bacteria 7328
53 Ga0157370_10002218 3300013104 Bacteria 23685
54 Ga0157374_10008961 3300013296 Bacteria 8576
55 Ga0163162_10025123 3300013306 Bacteria 5888
56 Ga0157375_10008652 3300013308 Bacteria 8917
57 Ga0157375_11382430 3300013308 Bacteria 829
58 Ga0157376_10084547 3300014969 Bacteria 2732
59 Ga0157376_10298087 3300014969 Bacteria 1525
60 Ga0182007_10003900 3300015262 Bacteria 6917
61 Ga0182007_10029884 3300015262 Bacteria 1865
62 Ga0163161_10044733 3300017792 Bacteria 3190
63 Ga0163161_10310231 3300017792 Bacteria 1245
64 Ga0213872_10000001 3300021361 Bacteria 662532
65 Ga0213872_10000040 3300021361 Bacteria 122419
66 Ga0213872_10020272 3300021361 Bacteria 3063
67 Ga0213872_10022487 3300021361 Bacteria 2904
68 Ga0213876_10001815 3300021384 Bacteria 12907
69 Ga0209435_100034 3300025206 Bacteria 144486
70 Ga0209784_100002 3300025224 Bacteria 1753105
71 Ga0209566_100003 3300025225 Bacteria 1753105
72 Ga0209674_100004 3300025226 Bacteria 1753105
73 Ga0209147_100004 3300025229 Bacteria 1371850
74 Ga0209563_100006 3300025230 Bacteria 1753105
75 Ga0209258_100915 3300025242 Bacteria 14941
76 Ga0209646_1000118 3300025246 Bacteria 149446
77 Ga0209026_1000106 3300025250 Bacteria 149446
78 Ga0209677_100003 3300025253 Bacteria 1753105
79 Ga0209759_1000190 3300025256 Bacteria 97956
80 Ga0209129_1001191 3300025258 Bacteria 14974
81 Ga0209565_1000003 3300025263 Bacteria 1099648
82 Ga0209455_1001511 3300025272 Bacteria 10406
83 Ga0209673_1000003 3300025273 Bacteria 980859
84 Ga0209130_1001267 3300025284 Bacteria 17558
85 Ga0209675_1000003 3300025291 Bacteria 1003982
86 Ga0209025_1000018 3300025294 Bacteria 686898
87 Ga0209025_1000238 3300025294 Bacteria 128478
88 Ga0209564_1000012 3300025295 Bacteria 792078
89 Ga0209256_1000029 3300025299 Bacteria 415922
90 Ga0207696_1000026 3300025711 Bacteria 418166
91 Ga0207655_1000083 3300025728 Bacteria 213295
92 Ga0207655_1003170 3300025728 Bacteria 12416
93 Ga0207713_1000042 3300025735 Bacteria 242199
94 Ga0207680_10084293 3300025903 Bacteria 2005
95 Ga0207680_10178566 3300025903 Bacteria 1434
96 Ga0207694_10169806 3300025924 Bacteria 1766
97 Ga0207709_10007779 3300025935 Bacteria 5940
98 Ga0207678_10110802 3300026067 Bacteria 2341
99 Ga0209281_1000050 3300027111 Bacteria 320102
100 Ga0209371_1000033 3300027312 Bacteria 381084
101 Ga0209371_1000277 3300027312 Bacteria 59241
102 Ga0209371_1001303 3300027312 Bacteria 17482
103 Ga0209371_1003456 3300027312 Bacteria 7677
104 Ga0209371_1003595 3300027312 Bacteria 7410
105 Ga0209974_10076935 3300027876 Unclassified 1143
106 Ga0268265_10866301 3300028380 Bacteria 885
107 Ga0265324_10030215 3300029957 Bacteria 1902
108 Ga0268256_1000315 3300030500 Bacteria 48457
109 Ga0268256_1000826 3300030500 Bacteria 22118
110 Ga0268256_1001114 3300030500 Bacteria 17482
111 Ga0268256_1002642 3300030500 Bacteria 8882
112 Ga0265332_10000024 3300031238 Bacteria 209663
113 Ga0265332_10000133 3300031238 Bacteria 61695
114 Ga0265327_10001574 3300031251 Bacteria 27874
115 Ga0265327_10016294 3300031251 Bacteria 4729
116 Ga0316575_10103369 3300031665 Bacteria 1159
117 Ga0316579_10018110 3300031691 Bacteria 3096
118 Ga0316579_10022345 3300031691 Bacteria 2828
119 Ga0265314_10025670 3300031711 Bacteria 4439
120 Ga0316576_10603790 3300031727 Bacteria 801
121 Ga0316578_10038874 3300031728 Bacteria 2747
122 Ga0307412_10048836 3300031911 Bacteria 2785
123 Ga0316574_0006814 3300035398 Bacteria 6208
124 Ga0436365_1792801 3300039437 Bacteria 22106
125 Ga0436361_0322939 3300039447 Bacteria 7608
126 Ga0436361_0419826 3300039447 Bacteria 59464
127 Ga0436361_0963391 3300039447 Bacteria 30538
128 Ga0436361_0993359 3300039447 Bacteria 43823
129 Ga0436361_1124288 3300039447 Bacteria 24604
130 Ga0439438_009465 3300041405 Bacteria 3152
131 Ga0439447_021378 3300041407 Bacteria 1705
132 Ga0439460_0027843 3300042461 Bacteria 1590
133 Ga0451577_0000669 3300042876 Bacteria 53954
134 Ga0451577_0001886 3300042876 Bacteria 26682
135 Ga0451577_0223165 3300042876 Bacteria 1703
136 Ga0451577_0296661 3300042876 Bacteria 1465
137 Ga0451577_0381329 3300042876 Bacteria 1279
138 Ga0466969_0026596 3300044656 Bacteria 2966
139 Ga0453683_0142338 3300044673 Bacteria 1514
140 Ga0453683_0232814 3300044673 Bacteria 1173
141 Ga0466965_0010833 3300044683 Bacteria 4265
142 Ga0466966_0067521 3300044684 Bacteria 2245
143 Ga0453684_0000005 3300044712 Bacteria 1431632
144 Ga0453684_0000326 3300044712 Bacteria 200766
145 Ga0453684_0000401 3300044712 Bacteria 178536
146 Ga0453684_0016553 3300044712 Bacteria 11515
147 Ga0453684_0069492 3300044712 Bacteria 4466
148 Ga0453684_0193126 3300044712 Bacteria 2380
149 Ga0466970_0240263 3300044765 Bacteria 1013
150 Ga0466957_0080665 3300044842 Bacteria 2026
151 Ga0466959_0016275 3300045049 Bacteria 5431
152 Ga0451576_0000057 3300045051 Bacteria 300798
153 Ga0451576_0010791 3300045051 Bacteria 10457
154 Ga0451576_0021712 3300045051 Bacteria 6971
155 Ga0451576_0054938 3300045051 Bacteria 4168
156 Ga0451576_0120365 3300045051 Bacteria 2733
157 Ga0451576_0207510 3300045051 Bacteria 2046
158 Ga0451576_0238854 3300045051 Bacteria 1898
159 Ga0451576_0588074 3300045051 Bacteria 1170
160 Ga0451576_1247588 3300045051 Bacteria 776
161 Ga0466967_0828861 3300045976 Bacteria 919
162 Ga0495617_000078 3300046452 Bacteria 76719
163 Ga0495627_038557 3300046453 Bacteria 1476
164 Ga0495591_000481 3300046458 Bacteria 31694
165 Ga0495629_0010147 3300046459 Bacteria 6865
166 Ga0495638_0002510 3300046460 Bacteria 14926
167 Ga0495638_0030790 3300046460 Bacteria 3451
168 Ga0495641_0038075 3300046461 Bacteria 2249
169 Ga0495651_0024873 3300046462 Bacteria 4658
170 Ga0495653_0000428 3300046463 Bacteria 33230
171 Ga0495650_0000019 3300046471 Bacteria 533849
172 Ga0495650_0000033 3300046471 Bacteria 412188
173 Ga0495650_0000077 3300046471 Bacteria 245511
174 Ga0495650_0000157 3300046471 Bacteria 155023
175 Ga0495650_0005124 3300046471 Bacteria 8654
176 Ga0495650_0021098 3300046471 Bacteria 3157
177 Ga0495650_0084761 3300046471 Bacteria 1215
178 Ga0495605_0002722 3300046474 Bacteria 10787
179 Ga0495605_0019186 3300046474 Bacteria 3658
180 Ga0495605_0019945 3300046474 Bacteria 3569
181 Ga0495605_0071419 3300046474 Bacteria 1639
182 Ga0495584_0013919 3300046491 Bacteria 4098
183 Ga0495584_0042776 3300046491 Bacteria 2286
184 Ga0495585_0000569 3300046492 Bacteria 34701
185 Ga0495585_0039792 3300046492 Bacteria 2642
186 Ga0495585_0115913 3300046492 Bacteria 1421
187 Ga0495596_0002026 3300046500 Bacteria 11139
188 Ga0495596_0003633 3300046500 Bacteria 7748
189 Ga0495596_0035166 3300046500 Bacteria 1987
190 Ga0495607_0000509 3300046501 Bacteria 38503
191 Ga0495607_0003786 3300046501 Bacteria 11432
192 Ga0495607_0022298 3300046501 Bacteria 3979
193 Ga0495607_0031406 3300046501 Bacteria 3252
194 Ga0495607_0108161 3300046501 Bacteria 1478
195 Ga0495607_0134092 3300046501 Bacteria 1284
196 Ga0495583_0011674 3300046506 Bacteria 5031
197 Ga0495606_0000296 3300046507 Bacteria 85795
198 Ga0495606_0000297 3300046507 Bacteria 85779
199 Ga0495606_0000337 3300046507 Bacteria 80941
200 Ga0495606_0001883 3300046507 Bacteria 26270
201 Ga0495608_0001009 3300046511 Bacteria 19834
202 Ga0495610_0000014 3300046512 Bacteria 444708
203 Ga0495616_0018203 3300046513 Bacteria 3861
204 Ga0495628_0002752 3300046516 Bacteria 15739
205 Ga0495631_0021337 3300046518 Bacteria 3016
206 Ga0495631_0262465 3300046518 Bacteria 736
207 Ga0495643_0016092 3300046522 Bacteria 4401
208 Ga0495644_0007790 3300046523 Bacteria 4130
209 Ga0495644_0016738 3300046523 Bacteria 2805
210 Ga0495648_0002400 3300046524 Bacteria 17389
211 Ga0495648_0005241 3300046524 Bacteria 10837
212 Ga0495648_0009011 3300046524 Bacteria 7789
213 Ga0495648_0010839 3300046524 Bacteria 6920
214 Ga0495648_0013153 3300046524 Bacteria 6134
215 Ga0495648_0017679 3300046524 Bacteria 5086
216 Ga0495652_0071871 3300046529 Bacteria 2885
217 Ga0495654_0001998 3300046530 Bacteria 13433
218 Ga0495654_0002743 3300046530 Bacteria 11107
219 Ga0495654_0005218 3300046530 Bacteria 7582
220 Ga0495654_0044742 3300046530 Bacteria 2188
221 Ga0495609_0000054 3300046538 Bacteria 147369
222 Ga0495609_0000803 3300046538 Bacteria 23487
223 Ga0495622_0000001 3300046557 Bacteria 365248
224 Ga0495622_0041792 3300046557 Bacteria 2132
225 Ga0495633_0003590 3300046558 Bacteria 10262
226 Ga0495633_0018435 3300046558 Bacteria 3546
227 Ga0495668_0000020 3300046616 Bacteria 411641
228 Ga0495668_0000807 3300046616 Bacteria 35935
229 Ga0495668_0014353 3300046616 Bacteria 4647
230 Ga0495668_0066079 3300046616 Bacteria 1990
231 Ga0495611_0012113 3300046648 Bacteria 3664
232 Ga0495625_0000646 3300046660 Bacteria 50125
233 Ga0495625_0070825 3300046660 Bacteria 2448
234 Ga0495625_0136317 3300046660 Bacteria 1659
235 Ga0495661_0018543 3300046665 Bacteria 4574
236 Ga0495661_0022203 3300046665 Bacteria 4129
237 Ga0495657_0069676 3300046675 Bacteria 2301
238 Ga0495599_0027261 3300046678 Bacteria 3581
239 Ga0495646_0021068 3300046680 Bacteria 4120
240 Ga0495646_0036348 3300046680 Bacteria 3051
241 Ga0495669_0013990 3300046684 Bacteria 3427
242 Ga0495624_0024992 3300046690 Bacteria 3927
243 Ga0495670_0003374 3300046691 Bacteria 7855
244 Ga0495670_0292640 3300046691 Bacteria 872
245 Ga0495671_0000005 3300046692 Bacteria 509397
246 Ga0495671_0017058 3300046692 Bacteria 3867
247 Ga0495671_0032443 3300046692 Bacteria 2666
248 Ga0495671_0069755 3300046692 Bacteria 1727
249 Ga0495671_0166154 3300046692 Bacteria 1073
250 Ga0495671_0171948 3300046692 Bacteria 1053
251 Ga0495649_0177702 3300046694 Bacteria 1111
252 Ga0495589_0011025 3300046794 Bacteria 4692
253 Ga0495589_0017977 3300046794 Bacteria 3627
254 Ga0495589_0057639 3300046794 Bacteria 1910
255 Ga0495600_0000529 3300046809 Bacteria 19820
256 Ga0495660_0000115 3300046810 Bacteria 86004
257 Ga0495660_0014888 3300046810 Bacteria 4498
258 Ga0495660_0135795 3300046810 Bacteria 1229
259 Ga0495604_0015880 3300047317 Bacteria 6011
260 Ga0495636_0033806 3300047318 Bacteria 2102
261 Ga0495674_0238123 3300047319 Bacteria 1500
262 Ga0495672_0000004 3300047320 Bacteria 631810
263 Ga0495683_0003108 3300047323 Bacteria 9728
264 Ga0495683_0043172 3300047323 Bacteria 2271
265 Ga0495683_0077914 3300047323 Bacteria 1620
266 Ga0495683_0083951 3300047323 Bacteria 1550
267 Ga0495687_014195 3300047443 Bacteria 4115
268 Ga0495677_0026371 3300047445 Bacteria 2108
269 Ga0495677_0109902 3300047445 Bacteria 1047
270 Ga0495679_027478 3300047446 Bacteria 1876
271 Ga0495679_050955 3300047446 Bacteria 1243
272 Ga0495679_054284 3300047446 Bacteria 1194
273 Ga0495685_012075 3300047447 Bacteria 2921
274 Ga0495673_0000009 3300047469 Bacteria 731993
275 Ga0495673_0000023 3300047469 Bacteria 539904
276 Ga0495673_0020845 3300047469 Bacteria 3253
277 Ga0495681_0046182 3300047470 Bacteria 2079
278 Ga0495681_0110591 3300047470 Bacteria 1190
279 Ga0495686_0000337 3300047472 Bacteria 77142
280 Ga0495686_0001978 3300047472 Bacteria 20331
281 Ga0495686_0066022 3300047472 Bacteria 2237
282 Ga0495686_0114438 3300047472 Bacteria 1614
283 Ga0495602_0129543 3300048088 Bacteria 2014
284 Ga0495626_0026402 3300048091 Bacteria 2831
285 Ga0496100_0063883 3300048903 Bacteria 2434
286 Ga0496101_0012370 3300048904 Bacteria 5693
287 Ga0496101_0075826 3300048904 Bacteria 2476
288 Ga0496102_0057576 3300048905 Bacteria 3549
289 Ga0496102_0084406 3300048905 Bacteria 2931
290 Ga0496104_0036407 3300048907 Bacteria 4601
291 Ga0496105_0075640 3300048908 Bacteria 2781
292 Ga0496105_0127760 3300048908 Bacteria 2095
293 Ga0496106_0000011 3300048909 Bacteria 222845
294 Ga0496106_0111129 3300048909 Bacteria 2133
295 Ga0496106_0379182 3300048909 Bacteria 1136
296 Ga0496107_0168547 3300048910 Bacteria 1624
297 Ga0496110_0267793 3300048913 Bacteria 1555
298 Ga0496113_0275623 3300048916 Bacteria 1345
299 Ga0496116_0184120 3300048919 Bacteria 1114
300 Ga0496118_0298113 3300048921 Bacteria 887
301 Ga0496119_0120232 3300048922 Bacteria 1445
302 Ga0496121_0008929 3300048924 Bacteria 11634
303 Ga0496121_0067443 3300048924 Bacteria 2900
304 Ga0496121_0188103 3300048924 Bacteria 1483
305 Ga0496122_0021214 3300048925 Bacteria 5827
306 Ga0496122_0030884 3300048925 Bacteria 4476
307 Ga0496123_0023983 3300048926 Bacteria 4653
308 Ga0496124_0029206 3300048927 Bacteria 4918
309 Ga0496124_0281449 3300048927 Bacteria 1212
310 Ga0496126_0076727 3300048929 Bacteria 2964
311 Ga0496126_0680040 3300048929 Bacteria 802
312 Ga0495678_000285 3300049459 Bacteria 55614
313 Ga0495678_037697 3300049459 Bacteria 1961
314 Ga0495682_0000004 3300049460 Bacteria 378337
315 Ga0501034_0000129 3300049571 Bacteria 139927
316 Ga0501034_0023158 3300049571 Bacteria 6330
317 Ga0501035_0041477 3300049822 Bacteria 4155
318 nmdc:mga00v17_276316_c1 3300050491 Bacteria 1090
319 nmdc:mga0yw44_33111_c1 3300050492 Bacteria 3017
320 nmdc:mga0k408_2207_c1 3300050493 Bacteria 10437
321 nmdc:mga0k408_9546_c1 3300050493 Bacteria 5235
322 nmdc:mga04h51_33934_c1 3300050495 Bacteria 1627
323 nmdc:mga07m45_30436_c1 3300050496 Bacteria 2990
324 Ga0500646_0002039 3300053090 Bacteria 5268
325 Ga0500583_0161450 3300053092 Bacteria 1116
326 Ga0500621_000001 3300053126 Bacteria 1049698
327 Ga0500574_000055 3300053141 Bacteria 13397
328 Ga0500586_001158 3300053145 Bacteria 5473
329 Ga0500586_001670 3300053145 Bacteria 4776
330 Ga0500619_000292 3300053154 Bacteria 10004

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048929 Ga0496126_0680040 Ga0496126_0680040_12_629 204
2 3300015262 Ga0182007_10003900 Ga0182007_100039007 205
3 3300046462 Ga0495651_0024873 Ga0495651_0024873_1404_2087 205
4 3300046463 Ga0495653_0000428 Ga0495653_0000428_3767_4450 205
5 3300046511 Ga0495608_0001009 Ga0495608_0001009_5511_6194 205
6 3300046516 Ga0495628_0002752 Ga0495628_0002752_5090_5773 205
7 3300046529 Ga0495652_0071871 Ga0495652_0071871_1520_2203 205
8 3300046675 Ga0495657_0069676 Ga0495657_0069676_1513_2196 205
9 3300046678 Ga0495599_0027261 Ga0495599_0027261_1648_2331 205
10 3300046680 Ga0495646_0036348 Ga0495646_0036348_2161_2844 205
11 3300046690 Ga0495624_0024992 Ga0495624_0024992_303_986 205
12 3300046809 Ga0495600_0000529 Ga0495600_0000529_17781_18464 205
13 3300047317 Ga0495604_0015880 Ga0495604_0015880_4998_5681 205
14 3300048088 Ga0495602_0129543 Ga0495602_0129543_36_719 205
15 3300053141 Ga0500574_000055 Ga0500574_000055_1258_1941 205
16 3300053154 Ga0500619_000292 Ga0500619_000292_1437_2120 205
17 3300045051 Ga0451576_1247588 Ga0451576_1247588_17_643 208
18 3300046471 Ga0495650_0005124 Ga0495650_0005124_2982_3659 211
19 3300049459 Ga0495678_037697 Ga0495678_037697_1148_1819 212
20 3300046680 Ga0495646_0021068 Ga0495646_0021068_2390_3103 215
21 3300053090 Ga0500646_0002039 Ga0500646_0002039_1641_2294 215
22 iso_pu_bacteria 2904504865 2904506740 218
23 3300046507 Ga0495606_0001883 Ga0495606_0001883_13893_14555 220
24 iso_pu_bacteria 2501025501 2501070017 220
25 iso_pu_bacteria 2501025504 2501407546 220
26 iso_pu_bacteria 2510917014 2511097414 220
27 iso_pu_bacteria 2510917015 2511105631 220
28 iso_pu_bacteria 2511231025 2511382724 220
29 iso_pu_bacteria 2511231035 2511435767 220
30 iso_pu_bacteria 2671180115 2671586000 220
31 iso_pu_bacteria 2738541297 2738826123 220
32 iso_pu_bacteria 2738541357 2739149920 220
33 iso_pu_bacteria 2738543003 2739191839 220
34 iso_pu_bacteria 2738543026 2739318316 220
35 iso_pu_bacteria 2738543029 2739336557 220
36 iso_pu_bacteria 2818991449 2819617849 220
37 iso_pu_bacteria 2821131069 2821135068 220
38 iso_pu_bacteria 2855730933 2855732864 220
39 iso_pu_bacteria 2855767633 2855771616 220
40 iso_pu_bacteria 2883087390 2883087841 220
41 iso_pu_bacteria 2904615490 2904616190 220
42 iso_pu_bacteria 2939602548 2939603903 220
43 iso_pu_bacteria 2818991436 2819541399 221
44 3300005615 Ga0070702_100058739 Ga0070702_1000587392 222
45 3300009036 Ga0105244_10000008 Ga0105244_10000008183 222
46 3300013104 Ga0157370_10002218 Ga0157370_1000221814 222
47 3300013308 Ga0157375_11382430 Ga0157375_113824301 222
48 3300025728 Ga0207655_1000083 Ga0207655_1000083105 222
49 3300002987 JGI25159J45721_1002353 JGI25159J45721_10023535 223
50 3300003323 rootH1_10087595 rootH1_100875954 223
51 3300003771 Ga0055526_1002195 Ga0055526_100219511 223
52 3300003773 Ga0055537_1000106 Ga0055537_100010623 223
53 3300003775 Ga0055524_1016527 Ga0055524_10165272 223
54 3300003784 Ga0055534_1000381 Ga0055534_10003815 223
55 3300003790 Ga0055528_1000011 Ga0055528_1000011163 223
56 3300005364 Ga0070673_100178811 Ga0070673_1001788112 223
57 3300005455 Ga0070663_100040737 Ga0070663_1000407372 223
58 3300005459 Ga0068867_100091329 Ga0068867_1000913292 223
59 3300009177 Ga0105248_10044764 Ga0105248_100447642 223
60 3300009551 Ga0105238_10323325 Ga0105238_103233252 223
61 3300013306 Ga0163162_10025123 Ga0163162_100251234 223
62 3300013308 Ga0157375_10008652 Ga0157375_100086525 223
63 3300014969 Ga0157376_10298087 Ga0157376_102980872 223
64 3300017792 Ga0163161_10310231 Ga0163161_103102311 223
65 3300025263 Ga0209565_1000003 Ga0209565_1000003838 223
66 3300025273 Ga0209673_1000003 Ga0209673_1000003724 223
67 3300025284 Ga0209130_1001267 Ga0209130_100126718 223
68 3300025291 Ga0209675_1000003 Ga0209675_1000003200 223
69 3300025295 Ga0209564_1000012 Ga0209564_10000128 223
70 3300025299 Ga0209256_1000029 Ga0209256_1000029225 223
71 3300025903 Ga0207680_10084293 Ga0207680_100842932 223
72 3300025924 Ga0207694_10169806 Ga0207694_101698061 223
73 3300026067 Ga0207678_10110802 Ga0207678_101108022 223
74 3300031251 Ga0265327_10001574 Ga0265327_1000157420 223
75 3300042876 Ga0451577_0001886 Ga0451577_0001886_5850_6521 223
76 3300044673 Ga0453683_0232814 Ga0453683_0232814_45_716 223
77 3300044683 Ga0466965_0010833 Ga0466965_0010833_2996_3667 223
78 3300044712 Ga0453684_0016553 Ga0453684_0016553_5761_6432 223
79 3300045976 Ga0466967_0828861 Ga0466967_0828861_229_900 223
80 3300046460 Ga0495638_0002510 Ga0495638_0002510_7806_8480 223
81 3300046471 Ga0495650_0000077 Ga0495650_0000077_59684_60358 223
82 3300046471 Ga0495650_0084761 Ga0495650_0084761_157_831 223
83 3300046474 Ga0495605_0002722 Ga0495605_0002722_8692_9366 223
84 3300046491 Ga0495584_0013919 Ga0495584_0013919_1964_2638 223
85 3300046492 Ga0495585_0039792 Ga0495585_0039792_641_1315 223
86 3300046492 Ga0495585_0115913 Ga0495585_0115913_576_1250 223
87 3300046500 Ga0495596_0003633 Ga0495596_0003633_3039_3713 223
88 3300046500 Ga0495596_0035166 Ga0495596_0035166_517_1191 223
89 3300046501 Ga0495607_0031406 Ga0495607_0031406_2444_3118 223
90 3300046501 Ga0495607_0108161 Ga0495607_0108161_159_833 223
91 3300046518 Ga0495631_0021337 Ga0495631_0021337_444_1118 223
92 3300046522 Ga0495643_0016092 Ga0495643_0016092_2011_2685 223
93 3300046523 Ga0495644_0007790 Ga0495644_0007790_1455_2129 223
94 3300046530 Ga0495654_0044742 Ga0495654_0044742_965_1639 223
95 3300046538 Ga0495609_0000803 Ga0495609_0000803_2158_2832 223
96 3300046557 Ga0495622_0041792 Ga0495622_0041792_1420_2094 223
97 3300046616 Ga0495668_0000020 Ga0495668_0000020_192553_193224 223
98 3300046616 Ga0495668_0014353 Ga0495668_0014353_1525_2199 223
99 3300046648 Ga0495611_0012113 Ga0495611_0012113_2286_2960 223
100 3300046684 Ga0495669_0013990 Ga0495669_0013990_2561_3235 223
101 3300046691 Ga0495670_0003374 Ga0495670_0003374_6286_6960 223
102 3300046794 Ga0495589_0017977 Ga0495589_0017977_2126_2800 223
103 3300046794 Ga0495589_0057639 Ga0495589_0057639_880_1554 223
104 3300047323 Ga0495683_0077914 Ga0495683_0077914_570_1244 223
105 3300047445 Ga0495677_0026371 Ga0495677_0026371_534_1208 223
106 3300047446 Ga0495679_054284 Ga0495679_054284_97_771 223
107 3300047469 Ga0495673_0020845 Ga0495673_0020845_1874_2548 223
108 3300047472 Ga0495686_0001978 Ga0495686_0001978_15782_16453 223
109 3300047472 Ga0495686_0066022 Ga0495686_0066022_379_1053 223
110 3300048091 Ga0495626_0026402 Ga0495626_0026402_416_1090 223
111 3300048904 Ga0496101_0075826 Ga0496101_0075826_488_1159 223
112 3300048905 Ga0496102_0084406 Ga0496102_0084406_1454_2128 223
113 3300048908 Ga0496105_0075640 Ga0496105_0075640_1393_2067 223
114 3300048909 Ga0496106_0000011 Ga0496106_0000011_63650_64324 223
115 3300048909 Ga0496106_0111129 Ga0496106_0111129_1380_2054 223
116 3300048910 Ga0496107_0168547 Ga0496107_0168547_525_1199 223
117 3300048924 Ga0496121_0008929 Ga0496121_0008929_3203_3877 223
118 3300048924 Ga0496121_0188103 Ga0496121_0188103_794_1465 223
119 3300048927 Ga0496124_0281449 Ga0496124_0281449_124_798 223
120 iso_pu_bacteria 2739367655 2739613440 223
121 iso_pu_bacteria 8020945358 8020950868 223
122 3300003187 JGI25151J46595_10000639 JGI25151J46595_1000063917 224
123 3300003856 Ga0058692_1003420 Ga0058692_10034202 224
124 3300005288 Ga0065714_10099989 Ga0065714_100999892 224
125 3300006051 Ga0075364_10158492 Ga0075364_101584922 224
126 3300006946 Ga0079104_1000150 Ga0079104_10001503 224
127 3300009011 Ga0105251_10000031 Ga0105251_1000003122 224
128 3300009036 Ga0105244_10003474 Ga0105244_100034742 224
129 3300011119 Ga0105246_10006144 Ga0105246_100061444 224
130 3300015262 Ga0182007_10029884 Ga0182007_100298843 224
131 3300021361 Ga0213872_10000001 Ga0213872_10000001563 224
132 3300021361 Ga0213872_10020272 Ga0213872_100202723 224
133 3300021384 Ga0213876_10001815 Ga0213876_100018158 224
134 3300025294 Ga0209025_1000018 Ga0209025_1000018175 224
135 3300025711 Ga0207696_1000026 Ga0207696_1000026142 224
136 3300025728 Ga0207655_1003170 Ga0207655_100317010 224
137 3300025735 Ga0207713_1000042 Ga0207713_100004222 224
138 3300027111 Ga0209281_1000050 Ga0209281_1000050175 224
139 3300027312 Ga0209371_1000277 Ga0209371_100027720 224
140 3300027312 Ga0209371_1001303 Ga0209371_10013033 224
141 3300027312 Ga0209371_1003456 Ga0209371_10034566 224
142 3300027312 Ga0209371_1003595 Ga0209371_10035956 224
143 3300027876 Ga0209974_10076935 Ga0209974_100769352 224
144 3300030500 Ga0268256_1000315 Ga0268256_100031529 224
145 3300030500 Ga0268256_1000826 Ga0268256_100082611 224
146 3300030500 Ga0268256_1001114 Ga0268256_100111414 224
147 3300031711 Ga0265314_10025670 Ga0265314_100256702 224
148 3300039437 Ga0436365_1792801 Ga0436365_1792801_4538_5212 224
149 3300039447 Ga0436361_0419826 Ga0436361_0419826_31273_31947 224
150 3300039447 Ga0436361_1124288 Ga0436361_1124288_6926_7603 224
151 3300041405 Ga0439438_009465 Ga0439438_009465_353_1027 224
152 3300041407 Ga0439447_021378 Ga0439447_021378_270_944 224
153 3300044842 Ga0466957_0080665 Ga0466957_0080665_420_1097 224
154 3300046453 Ga0495627_038557 Ga0495627_038557_25_699 224
155 3300046458 Ga0495591_000481 Ga0495591_000481_24896_25570 224
156 3300046459 Ga0495629_0010147 Ga0495629_0010147_4789_5463 224
157 3300046461 Ga0495641_0038075 Ga0495641_0038075_371_1045 224
158 3300046471 Ga0495650_0000033 Ga0495650_0000033_409273_409947 224
159 3300046474 Ga0495605_0019186 Ga0495605_0019186_2676_3350 224
160 3300046474 Ga0495605_0019945 Ga0495605_0019945_220_894 224
161 3300046474 Ga0495605_0071419 Ga0495605_0071419_581_1255 224
162 3300046491 Ga0495584_0042776 Ga0495584_0042776_439_1113 224
163 3300046500 Ga0495596_0002026 Ga0495596_0002026_4618_5292 224
164 3300046501 Ga0495607_0000509 Ga0495607_0000509_31386_32060 224
165 3300046501 Ga0495607_0022298 Ga0495607_0022298_1906_2580 224
166 3300046501 Ga0495607_0134092 Ga0495607_0134092_116_790 224
167 3300046507 Ga0495606_0000296 Ga0495606_0000296_80295_80969 224
168 3300046507 Ga0495606_0000297 Ga0495606_0000297_53055_53729 224
169 3300046513 Ga0495616_0018203 Ga0495616_0018203_2685_3359 224
170 3300046518 Ga0495631_0262465 Ga0495631_0262465_47_721 224
171 3300046523 Ga0495644_0016738 Ga0495644_0016738_1726_2400 224
172 3300046524 Ga0495648_0013153 Ga0495648_0013153_2195_2869 224
173 3300046530 Ga0495654_0001998 Ga0495654_0001998_10255_10929 224
174 3300046558 Ga0495633_0003590 Ga0495633_0003590_157_831 224
175 3300046558 Ga0495633_0018435 Ga0495633_0018435_1592_2266 224
176 3300046660 Ga0495625_0136317 Ga0495625_0136317_609_1283 224
177 3300046691 Ga0495670_0292640 Ga0495670_0292640_67_741 224
178 3300046692 Ga0495671_0000005 Ga0495671_0000005_119898_120572 224
179 3300046692 Ga0495671_0017058 Ga0495671_0017058_1541_2215 224
180 3300046692 Ga0495671_0166154 Ga0495671_0166154_84_758 224
181 3300046794 Ga0495589_0011025 Ga0495589_0011025_2495_3169 224
182 3300046810 Ga0495660_0000115 Ga0495660_0000115_24965_25639 224
183 3300046810 Ga0495660_0014888 Ga0495660_0014888_881_1555 224
184 3300047319 Ga0495674_0238123 Ga0495674_0238123_673_1347 224
185 3300047320 Ga0495672_0000004 Ga0495672_0000004_569889_570563 224
186 3300047323 Ga0495683_0043172 Ga0495683_0043172_1515_2189 224
187 3300047323 Ga0495683_0083951 Ga0495683_0083951_654_1328 224
188 3300047469 Ga0495673_0000009 Ga0495673_0000009_625106_625780 224
189 3300047469 Ga0495673_0000023 Ga0495673_0000023_522989_523663 224
190 3300047470 Ga0495681_0046182 Ga0495681_0046182_257_931 224
191 3300047472 Ga0495686_0114438 Ga0495686_0114438_854_1528 224
192 3300048919 Ga0496116_0184120 Ga0496116_0184120_27_701 224
193 3300048922 Ga0496119_0120232 Ga0496119_0120232_682_1356 224
194 3300048925 Ga0496122_0021214 Ga0496122_0021214_2051_2725 224
195 3300048925 Ga0496122_0030884 Ga0496122_0030884_3159_3833 224
196 3300048926 Ga0496123_0023983 Ga0496123_0023983_948_1622 224
197 3300048927 Ga0496124_0029206 Ga0496124_0029206_3244_3918 224
198 3300048929 Ga0496126_0076727 Ga0496126_0076727_1550_2224 224
199 3300049459 Ga0495678_000285 Ga0495678_000285_28953_29627 224
200 3300049460 Ga0495682_0000004 Ga0495682_0000004_3265_3939 224
201 3300049571 Ga0501034_0023158 Ga0501034_0023158_1702_2376 224
202 3300049822 Ga0501035_0041477 Ga0501035_0041477_1748_2422 224
203 3300050491 nmdc:mga00v17_276316_c1 nmdc:mga00v17_276316_c1_231_905 224
204 3300053126 Ga0500621_000001 Ga0500621_000001_61257_61931 224
205 3300053145 Ga0500586_001158 Ga0500586_001158_2460_3134 224
206 iso_pu_bacteria 2834641062 2834644239 224
207 iso_pu_bacteria 8003400568 8003401948 224
208 3300006038 Ga0075365_10045377 Ga0075365_100453774 225
209 3300021361 Ga0213872_10000040 Ga0213872_1000004011 225
210 3300021361 Ga0213872_10022487 Ga0213872_100224873 225
211 3300029957 Ga0265324_10030215 Ga0265324_100302152 225
212 3300031238 Ga0265332_10000024 Ga0265332_10000024146 225
213 3300031238 Ga0265332_10000133 Ga0265332_1000013310 225
214 3300031251 Ga0265327_10016294 Ga0265327_100162941 225
215 3300031691 Ga0316579_10018110 Ga0316579_100181103 225
216 3300039447 Ga0436361_0322939 Ga0436361_0322939_1789_2469 225
217 3300039447 Ga0436361_0963391 Ga0436361_0963391_5144_5821 225
218 3300039447 Ga0436361_0993359 Ga0436361_0993359_24309_24989 225
219 3300042876 Ga0451577_0000669 Ga0451577_0000669_29069_29746 225
220 3300042876 Ga0451577_0223165 Ga0451577_0223165_870_1547 225
221 3300042876 Ga0451577_0296661 Ga0451577_0296661_307_984 225
222 3300044712 Ga0453684_0000005 Ga0453684_0000005_988141_988818 225
223 3300044712 Ga0453684_0000401 Ga0453684_0000401_74844_75521 225
224 3300044712 Ga0453684_0069492 Ga0453684_0069492_3374_4051 225
225 3300044712 Ga0453684_0193126 Ga0453684_0193126_441_1118 225
226 3300045051 Ga0451576_0021712 Ga0451576_0021712_3668_4345 225
227 3300045051 Ga0451576_0120365 Ga0451576_0120365_852_1529 225
228 3300045051 Ga0451576_0588074 Ga0451576_0588074_38_715 225
229 3300046471 Ga0495650_0000019 Ga0495650_0000019_37389_38066 225
230 3300046507 Ga0495606_0000337 Ga0495606_0000337_13429_14106 225
231 3300050492 nmdc:mga0yw44_33111_c1 nmdc:mga0yw44_33111_c1_978_1655 225
232 3300005262 Ga0065165_1000007 Ga0065165_1000007235 226
233 3300010375 Ga0105239_10055809 Ga0105239_100558092 226
234 3300013296 Ga0157374_10008961 Ga0157374_100089612 226
235 3300014969 Ga0157376_10084547 Ga0157376_100845472 226
236 3300045051 Ga0451576_0000057 Ga0451576_0000057_182620_183300 226
237 3300046501 Ga0495607_0003786 Ga0495607_0003786_1688_2368 226
238 3300046506 Ga0495583_0011674 Ga0495583_0011674_3344_4024 226
239 3300046538 Ga0495609_0000054 Ga0495609_0000054_54061_54741 226
240 3300046616 Ga0495668_0066079 Ga0495668_0066079_255_935 226
241 3300046665 Ga0495661_0018543 Ga0495661_0018543_1323_2003 226
242 3300046692 Ga0495671_0171948 Ga0495671_0171948_111_791 226
243 3300046694 Ga0495649_0177702 Ga0495649_0177702_366_1046 226
244 3300046810 Ga0495660_0135795 Ga0495660_0135795_415_1095 226
245 3300047318 Ga0495636_0033806 Ga0495636_0033806_779_1459 226
246 3300047443 Ga0495687_014195 Ga0495687_014195_374_1054 226
247 3300047445 Ga0495677_0109902 Ga0495677_0109902_288_968 226
248 3300047446 Ga0495679_050955 Ga0495679_050955_92_772 226
249 3300047447 Ga0495685_012075 Ga0495685_012075_1263_1943 226
250 3300047470 Ga0495681_0110591 Ga0495681_0110591_135_815 226
251 iso_pu_bacteria 2554235132 2554814883 226
252 iso_pu_bacteria 2738541297 2738826121 226
253 iso_pu_bacteria 2738541357 2739149918 226
254 iso_pu_bacteria 2738543003 2739191837 226
255 iso_pu_bacteria 2738543026 2739318314 226
256 iso_pu_bacteria 2738543029 2739336555 226
257 iso_pu_bacteria 2744054900 2746085579 226
258 iso_pu_bacteria 2744054901 2746092837 226
259 iso_pu_bacteria 2821131069 2821135070 226
260 3300003187 JGI25151J46595_10000769 JGI25151J46595_1000076919 227
261 3300006195 Ga0075366_10001194 Ga0075366_100011949 227
262 3300006353 Ga0075370_10007256 Ga0075370_100072565 227
263 3300009148 Ga0105243_10010654 Ga0105243_100106544 227
264 3300025258 Ga0209129_1001191 Ga0209129_100119115 227
265 3300025294 Ga0209025_1000238 Ga0209025_100023878 227
266 3300025935 Ga0207709_10007779 Ga0207709_100077793 227
267 3300031665 Ga0316575_10103369 Ga0316575_101033692 227
268 3300031691 Ga0316579_10022345 Ga0316579_100223452 227
269 3300031727 Ga0316576_10603790 Ga0316576_106037901 227
270 3300031728 Ga0316578_10038874 Ga0316578_100388742 227
271 3300031911 Ga0307412_10048836 Ga0307412_100488365 227
272 3300035398 Ga0316574_0006814 Ga0316574_0006814_4286_4969 227
273 3300042461 Ga0439460_0027843 Ga0439460_0027843_623_1306 227
274 3300046524 Ga0495648_0010839 Ga0495648_0010839_1127_1813 227
275 3300048924 Ga0496121_0067443 Ga0496121_0067443_1411_2094 227
276 3300050493 nmdc:mga0k408_9546_c1 nmdc:mga0k408_9546_c1_1879_2562 227
277 3300050495 nmdc:mga04h51_33934_c1 nmdc:mga04h51_33934_c1_239_922 227
278 3300050496 nmdc:mga07m45_30436_c1 nmdc:mga07m45_30436_c1_1391_2074 227
279 iso_pu_bacteria 2513237165 2514042818 227
280 iso_pu_bacteria 2521172590 2521558290 227
281 iso_pu_bacteria 2548876994 2550695856 227
282 iso_pu_bacteria 2818991445 2819593627 227
283 iso_pu_bacteria 2923510766 2923511666 227
284 iso_pu_bacteria 644736347 644751979 227
285 3300005844 Ga0068862_101025751 Ga0068862_1010257511 228
286 3300006195 Ga0075366_10000539 Ga0075366_1000053914 228
287 3300028380 Ga0268265_10866301 Ga0268265_108663011 228
288 3300050493 nmdc:mga0k408_2207_c1 nmdc:mga0k408_2207_c1_7289_7975 228
289 iso_pu_bacteria 2515154189 2516023122 228
290 3300005530 Ga0070679_100541731 Ga0070679_1005417312 229
291 3300045051 Ga0451576_0238854 Ga0451576_0238854_220_909 229
292 3300046471 Ga0495650_0021098 Ga0495650_0021098_829_1542 229
293 3300046557 Ga0495622_0000001 Ga0495622_0000001_267117_267806 229
294 3300053092 Ga0500583_0161450 Ga0500583_0161450_113_811 229
295 3300005288 Ga0065714_10117672 Ga0065714_101176721 230
296 3300005335 Ga0070666_10024613 Ga0070666_100246132 230
297 3300005367 Ga0070667_100038491 Ga0070667_1000384913 230
298 3300009036 Ga0105244_10121348 Ga0105244_101213482 230
299 3300009551 Ga0105238_10295721 Ga0105238_102957212 230
300 3300017792 Ga0163161_10044733 Ga0163161_100447331 230
301 3300025903 Ga0207680_10178566 Ga0207680_101785662 230
302 3300044673 Ga0453683_0142338 Ga0453683_0142338_131_826 230
303 3300045051 Ga0451576_0207510 Ga0451576_0207510_1068_1763 230
304 3300046452 Ga0495617_000078 Ga0495617_000078_47007_47723 230
305 3300046471 Ga0495650_0000157 Ga0495650_0000157_48018_48734 230
306 3300046492 Ga0495585_0000569 Ga0495585_0000569_27656_28369 230
307 3300046512 Ga0495610_0000014 Ga0495610_0000014_289489_290205 230
308 3300046524 Ga0495648_0002400 Ga0495648_0002400_8768_9484 230
309 3300046524 Ga0495648_0017679 Ga0495648_0017679_485_1201 230
310 3300046530 Ga0495654_0005218 Ga0495654_0005218_6184_6897 230
311 3300046616 Ga0495668_0000807 Ga0495668_0000807_6185_6901 230
312 3300046660 Ga0495625_0070825 Ga0495625_0070825_960_1673 230
313 3300046692 Ga0495671_0000005 Ga0495671_0000005_117810_118538 230
314 3300046692 Ga0495671_0069755 Ga0495671_0069755_279_992 230
315 3300046810 Ga0495660_0014888 Ga0495660_0014888_2915_3628 230
316 3300047446 Ga0495679_027478 Ga0495679_027478_209_922 230
317 3300047469 Ga0495673_0000009 Ga0495673_0000009_627140_627856 230
318 3300047472 Ga0495686_0000337 Ga0495686_0000337_58426_59118 230
319 3300048903 Ga0496100_0063883 Ga0496100_0063883_389_1081 230
320 3300048904 Ga0496101_0012370 Ga0496101_0012370_3663_4355 230
321 3300048905 Ga0496102_0057576 Ga0496102_0057576_630_1322 230
322 3300048907 Ga0496104_0036407 Ga0496104_0036407_2078_2770 230
323 3300048908 Ga0496105_0127760 Ga0496105_0127760_122_814 230
324 3300048909 Ga0496106_0379182 Ga0496106_0379182_216_908 230
325 3300048913 Ga0496110_0267793 Ga0496110_0267793_754_1446 230
326 3300048921 Ga0496118_0298113 Ga0496118_0298113_158_871 230
327 3300048925 Ga0496122_0021214 Ga0496122_0021214_4085_4801 230
328 3300048925 Ga0496122_0030884 Ga0496122_0030884_1083_1799 230
329 3300048926 Ga0496123_0023983 Ga0496123_0023983_2982_3698 230
330 3300049571 Ga0501034_0000129 Ga0501034_0000129_45200_45892 230
331 3300053145 Ga0500586_001670 Ga0500586_001670_3395_4108 230
332 3300002741 JGI25157J39369_1001824 JGI25157J39369_10018242 231
333 3300003751 Ga0055538_1000002 Ga0055538_1000002274 231
334 3300003751 Ga0055538_1000002 Ga0055538_1000002297 231
335 3300003752 Ga0055539_1000002 Ga0055539_1000002274 231
336 3300003752 Ga0055539_1000002 Ga0055539_1000002297 231
337 3300003756 Ga0055533_1000004 Ga0055533_1000004274 231
338 3300003756 Ga0055533_1000004 Ga0055533_1000004297 231
339 3300003758 Ga0055532_1000749 Ga0055532_10007496 231
340 3300003759 Ga0055525_1000002 Ga0055525_1000002274 231
341 3300003759 Ga0055525_1000002 Ga0055525_1000002297 231
342 3300003761 Ga0055535_1003618 Ga0055535_10036182 231
343 3300003841 Ga0055541_1000002 Ga0055541_1000002546 231
344 3300003841 Ga0055541_1000002 Ga0055541_1000002569 231
345 3300003856 Ga0058692_1001343 Ga0058692_10013435 231
346 3300009092 Ga0105250_10000011 Ga0105250_10000011118 231
347 3300025206 Ga0209435_100034 Ga0209435_10003455 231
348 3300025224 Ga0209784_100002 Ga0209784_100002508 231
349 3300025224 Ga0209784_100002 Ga0209784_100002528 231
350 3300025225 Ga0209566_100003 Ga0209566_100003508 231
351 3300025225 Ga0209566_100003 Ga0209566_100003528 231
352 3300025226 Ga0209674_100004 Ga0209674_100004508 231
353 3300025226 Ga0209674_100004 Ga0209674_100004528 231
354 3300025229 Ga0209147_100004 Ga0209147_10000496 231
355 3300025230 Ga0209563_100006 Ga0209563_100006508 231
356 3300025230 Ga0209563_100006 Ga0209563_100006528 231
357 3300025242 Ga0209258_100915 Ga0209258_10091510 231
358 3300025246 Ga0209646_1000118 Ga0209646_100011855 231
359 3300025250 Ga0209026_1000106 Ga0209026_100010655 231
360 3300025253 Ga0209677_100003 Ga0209677_100003508 231
361 3300025253 Ga0209677_100003 Ga0209677_100003528 231
362 3300025256 Ga0209759_1000190 Ga0209759_100019086 231
363 3300025272 Ga0209455_1001511 Ga0209455_10015113 231
364 3300027312 Ga0209371_1000033 Ga0209371_1000033367 231
365 3300030500 Ga0268256_1002642 Ga0268256_10026426 231
366 3300046660 Ga0495625_0000646 Ga0495625_0000646_41794_42489 231
367 3300048916 Ga0496113_0275623 Ga0496113_0275623_620_1315 231
368 3300006944 Ga0099823_1020346 Ga0099823_10203462 234
369 3300006946 Ga0079104_1010111 Ga0079104_10101112 236
370 iso_pu_bacteria 2839094727 2839095605 236
371 3300045051 Ga0451576_0054938 Ga0451576_0054938_98_832 237
372 3300042876 Ga0451577_0381329 Ga0451577_0381329_526_1269 238
373 3300044656 Ga0466969_0026596 Ga0466969_0026596_1382_2134 238
374 3300044684 Ga0466966_0067521 Ga0466966_0067521_836_1588 238
375 3300044712 Ga0453684_0000326 Ga0453684_0000326_139690_140433 238
376 3300044765 Ga0466970_0240263 Ga0466970_0240263_134_886 238
377 3300045049 Ga0466959_0016275 Ga0466959_0016275_1021_1773 238
378 3300045051 Ga0451576_0010791 Ga0451576_0010791_565_1308 238
379 3300046524 Ga0495648_0005241 Ga0495648_0005241_4486_5223 238
380 3300046452 Ga0495617_000078 Ga0495617_000078_49083_49853 240
381 3300046460 Ga0495638_0030790 Ga0495638_0030790_2299_3069 240
382 3300046471 Ga0495650_0000157 Ga0495650_0000157_50094_50864 240
383 3300046492 Ga0495585_0000569 Ga0495585_0000569_25526_26296 240
384 3300046512 Ga0495610_0000014 Ga0495610_0000014_287359_288129 240
385 3300046524 Ga0495648_0002400 Ga0495648_0002400_10844_11614 240
386 3300046524 Ga0495648_0009011 Ga0495648_0009011_6017_6787 240
387 3300046530 Ga0495654_0002743 Ga0495654_0002743_625_1395 240
388 3300046616 Ga0495668_0000807 Ga0495668_0000807_8261_9031 240
389 3300046665 Ga0495661_0022203 Ga0495661_0022203_1567_2337 240
390 3300046692 Ga0495671_0032443 Ga0495671_0032443_752_1522 240
391 3300047323 Ga0495683_0003108 Ga0495683_0003108_2053_2823 240
392 3300053145 Ga0500586_001670 Ga0500586_001670_1265_2035 240
393 3300002704 JGI25155J39150_1000510 JGI25155J39150_10005106 247
394 3300002705 JGI25156J39149_1001594 JGI25156J39149_10015946 247
395 3300002738 JGI25154J39366_1001299 JGI25154J39366_10012996 247

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

35

144

0.98

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

176

252

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6is2-assembly1.cif.gz_A crystal structure of staphylococcus aureus response regulator arlr receiver domain in complex with mg 0.985 17 134
3nnn-assembly1.cif.gz_B bef3 activated drrd receiver domain 0.9806 16 134
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.976 18 134
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9757 18 134
1nxx-assembly1.cif.gz_A-2 micarec ph 5.5 0.975 18 134
ID Description Score Start End Superfamily
af_Q9KJN4_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9842 17 93 3.40.50.2300
af_P76340_1_79_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.982 17 96 3.40.50.2300
af_Q06065_2_134_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9735 17 137 3.40.50.2300
af_P52076_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9708 17 96 3.40.50.2300
af_P76340_1_79_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9699 17 96 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A0H5GUD9-F1-model_v4 Transcriptional activator 0.9179 17 239 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A849ZME1-F1-model_v4 Response regulator 0.9157 17 166 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A5M8E573-F1-model_v4 Response regulator 0.9149 17 200 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A5M8E573-F1-model_v4 Response regulator 0.9103 17 200 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A849ZME1-F1-model_v4 Response regulator 0.91 17 166 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Feature Viewer

pLDDT pTM Quality
81.87 0.55 Medium
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Predicted Structure (AlphaFold2)

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