F431981

General Info

Members Datasets Scaffolds Average Seq Length
391 280 334 290

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10019611|Ga0081455_100196113
Length 324
Sequence MPRLETNRAAEMEVFVRVVDLGGFSAAAHEFRMTPSGVSKLVFNRSTRQLQLTPEGQIFYDRSVRVLADLGEAEREAAAGASPRGHLRINSNIPFGLRHVMPLVPIFLQQHPAITLDIVLSDTVVDLLQERADIAIRVGPMPDSSLTLRKLGTSPMAVVAAPGYLARNGTPSTPDELARHRSIGWTFARLQSGWPFKKNDTTDRISPPPIARVSDGEAARLLALDGVGLARLALFHIGPDISAGRLIPVLETFNPGDCEDIHAVYLGQGGPLPARVRAFIDFLADHARIGQPRLEATSNGQWRVLVRAVSRSAPRPEATSSRQA

Samples

Sample ID Description Type Environment
1 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
2 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
3 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
4 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
5 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
6 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
7 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
8 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
9 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
10 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
11 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
12 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
13 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
14 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
15 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
16 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
17 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
18 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
19 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
20 2596583598 Ralstonia sp. UNCCL144 Isolate Unclassified
21 2599185178 Ralstonia sp. NFACC01 Isolate Rhizoplane
22 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
23 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
24 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
25 2643221627 Mesorhizobium sp. Root102 Isolate Unclassified
26 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
27 2718217725 Pseudomonas fluorescens CREA-C16 Isolate Rhizosphere
28 2718217927 Rhizobium sp. N324 Isolate Nodule
29 2718218423 Rhizobium sp. N941 Isolate Nodule
30 2721755809 Rhizobium sp. N541 Isolate Nodule
31 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
32 2791355267 Rhizobium sp. L18 Isolate Nodule
33 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
34 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
35 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
36 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
37 2885266251 Ralstonia sp. SET104 Isolate Nodule
38 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
39 2928058823 Ralstonia sp. 1138 Isolate Unclassified
40 2936381700 Rhizobium chutanense C16 Isolate Unclassified
41 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
42 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
43 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
44 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
45 2996887358 Rhizobium sp. R711 Isolate Nodule
46 2996893221 Rhizobium sp. R635 Isolate Nodule
47 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
48 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
49 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
50 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
51 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
52 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
53 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
54 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
55 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
56 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
57 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
58 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
59 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
60 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
61 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
62 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
63 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
64 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
65 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
66 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
67 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
68 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
69 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
70 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
71 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
72 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
73 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
74 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
75 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
76 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
77 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
78 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
79 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
80 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
81 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
82 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
83 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
84 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
85 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
86 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
87 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
88 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
89 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
90 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
91 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
92 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
93 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
94 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
95 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
96 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
97 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
98 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
99 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
100 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
101 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
102 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
103 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
104 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
105 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
106 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
107 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
108 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
109 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
110 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
111 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
112 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
113 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
114 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
115 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
116 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
117 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
118 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
119 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
120 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
123 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
124 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
125 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
126 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
127 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
128 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
129 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
130 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
131 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
132 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
133 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
134 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
135 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
136 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
137 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
138 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
139 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
140 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
141 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
142 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
143 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
144 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
158 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
160 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
161 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
162 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
163 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
164 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
165 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
166 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
167 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
168 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
169 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
170 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
171 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
172 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
173 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
174 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
175 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
176 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
177 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
178 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
179 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
180 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
181 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
182 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
183 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
184 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
185 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
186 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
187 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
188 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
189 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
190 3300044650 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4E Metagenome Unclassified
191 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
192 3300044671 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA1E Metagenome Unclassified
193 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
194 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
195 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
196 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
197 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
198 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
199 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
200 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
201 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
202 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
203 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
204 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
205 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
206 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
207 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
208 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
209 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
210 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
211 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
212 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
213 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
214 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
215 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
216 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
217 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
218 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
219 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
220 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
221 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
222 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
223 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
224 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
225 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
226 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
227 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
228 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
229 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
230 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
231 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
232 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
233 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
234 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
235 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
236 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
237 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
238 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
239 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
240 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
241 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
242 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
243 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
244 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
245 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
246 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
247 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
248 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
249 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
250 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
251 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
252 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
253 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
254 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
255 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
256 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
257 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
258 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
259 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
260 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
261 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
262 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
263 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
264 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
265 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
266 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
267 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
268 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
269 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
270 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
271 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
272 8005275841 Rhizobium sp. N4311 Isolate Nodule
273 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
274 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
275 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
276 8018176218 Rhizobium sp. N122 Isolate Nodule
277 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
278 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
279 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
280 8057575449 Rhizobium mayense CCGE526 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 84.4
Metatranscriptomes 1.02
Isolates 14.58

Biome Distribution

Category Percentage (%)
Aerial Root 0.26
Bulb 0
Endosphere 29.67
Nodule 8.18
Rhizoplane 3.58
Rhizosphere 41.18
Stem 0
Stem Tuber 0
Unclassified 17.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000644 3300001915 Bacteria 10554
2 JGI24740J21852_10000547 3300001979 Bacteria 16065
3 JGI24740J21852_10002077 3300001979 Bacteria 9144
4 JGI24740J21852_10013583 3300001979 Bacteria 3032
5 JGI24739J22299_10008659 3300001989 Bacteria 3796
6 JGI24739J22299_10033434 3300001989 Bacteria 1759
7 JGI25156J39149_1011966 3300002705 Bacteria 1937
8 JGI25158J39367_1000086 3300002739 Bacteria 21360
9 JGI25152J39213_1001133 3300002773 Bacteria 12414
10 JGI25152J39213_1002138 3300002773 Bacteria 7751
11 JGI25152J39213_1017741 3300002773 Bacteria 1334
12 JGI25159J45721_1000216 3300002987 Bacteria 27237
13 JGI25159J45721_1000441 3300002987 Bacteria 19128
14 JGI25151J46595_10025418 3300003187 Bacteria 2409
15 JGI25165J46597_1004895 3300003214 Bacteria 2713
16 JGI25153J46596_10005713 3300003215 Bacteria 6485
17 JGI25153J46596_10006291 3300003215 Bacteria 6050
18 rootH1_10064987 3300003316 Bacteria 3017
19 rootH1_10146777 3300003323 Bacteria 1746
20 rootH1_10170988 3300003323 Bacteria 1446
21 JGI25160J50197_1000018 3300003354 Bacteria 239933
22 JGI25160J50197_1016154 3300003354 Bacteria 2416
23 JGI25160J50197_1016686 3300003354 Bacteria 2356
24 JGI25161J50226_1000020 3300003374 Bacteria 164844
25 JGI25161J50226_1000099 3300003374 Bacteria 70186
26 JGI25161J50226_1002131 3300003374 Bacteria 5319
27 Ga0006562J51391_1025878 3300003578 Bacteria 3550
28 Ga0055538_1001720 3300003751 Bacteria 3829
29 Ga0055538_1002010 3300003751 Bacteria 3298
30 Ga0055539_1000367 3300003752 Bacteria 19207
31 Ga0055532_1000378 3300003758 Bacteria 22963
32 Ga0055525_1000521 3300003759 Bacteria 18516
33 Ga0055527_1000938 3300003760 Bacteria 7189
34 Ga0055535_1000796 3300003761 Bacteria 22963
35 Ga0055529_1000691 3300003763 Bacteria 22963
36 Ga0055526_1001758 3300003771 Bacteria 15039
37 Ga0055526_1004639 3300003771 Bacteria 8178
38 Ga0055526_1011013 3300003771 Bacteria 4131
39 Ga0055526_1030306 3300003771 Bacteria 1581
40 Ga0055524_1000065 3300003775 Bacteria 132117
41 Ga0055524_1004704 3300003775 Bacteria 6252
42 Ga0055524_1005743 3300003775 Bacteria 5487
43 Ga0055524_1017565 3300003775 Bacteria 2520
44 Ga0055528_1009837 3300003790 Bacteria 3957
45 Ga0055528_1011012 3300003790 Bacteria 3626
46 Ga0055540_1000235 3300003792 Bacteria 50448
47 Ga0055540_1008410 3300003792 Bacteria 3721
48 Ga0055540_1010739 3300003792 Bacteria 3023
49 Ga0055543_1000004 3300004625 Bacteria 239971
50 Ga0055543_1000289 3300004625 Bacteria 36374
51 Ga0065165_1000065 3300005262 Bacteria 174075
52 Ga0065165_1009564 3300005262 Bacteria 4327
53 Ga0070661_100000792 3300005344 Bacteria 22704
54 Ga0070668_100036339 3300005347 Bacteria 3759
55 Ga0070671_100069150 3300005355 Bacteria 2945
56 Ga0070659_100093565 3300005366 Bacteria 2412
57 Ga0070667_100020906 3300005367 Bacteria 5437
58 Ga0070663_100000480 3300005455 Bacteria 21028
59 Ga0070663_100013849 3300005455 Bacteria 5159
60 Ga0070663_100317725 3300005455 Unclassified 1251
61 Ga0070681_10329986 3300005458 Bacteria 1435
62 Ga0070681_10344636 3300005458 Bacteria 1400
63 Ga0070665_100003615 3300005548 Bacteria 16375
64 Ga0070665_100063531 3300005548 Bacteria 3702
65 Ga0070665_100146159 3300005548 Bacteria 2367
66 Ga0070664_100000356 3300005564 Bacteria 33677
67 Ga0068854_100000833 3300005578 Bacteria 18439
68 Ga0068856_100001727 3300005614 Bacteria 22854
69 Ga0081455_10019611 3300005937 Bacteria 6389
70 Ga0075365_10008214 3300006038 Bacteria 5908
71 Ga0075363_100119332 3300006048 Bacteria 1471
72 Ga0075362_10056920 3300006177 Bacteria 1761
73 Ga0075369_10000198 3300006186 Bacteria 17471
74 Ga0075369_10016227 3300006186 Bacteria 3002
75 Ga0075370_10026493 3300006353 Bacteria 3212
76 Ga0075370_10252278 3300006353 Bacteria 1046
77 Ga0075431_100421583 3300006847 Bacteria 1334
78 Ga0079104_1009466 3300006946 Bacteria 3297
79 Ga0105244_10026268 3300009036 Bacteria 3153
80 Ga0105250_10034526 3300009092 Bacteria 2029
81 Ga0105240_10000012 3300009093 Bacteria 496639
82 Ga0105240_10049197 3300009093 Bacteria 5322
83 Ga0105240_10221632 3300009093 Bacteria 2203
84 Ga0105248_10285407 3300009177 Bacteria 1858
85 Ga0105237_10000054 3300009545 Bacteria 155063
86 Ga0105237_10023495 3300009545 Bacteria 6315
87 Ga0105237_10295393 3300009545 Bacteria 1623
88 Ga0105238_10758423 3300009551 Bacteria 984
89 Ga0123341_1000007 3300009765 Bacteria 147072
90 Ga0123342_1007059 3300009766 Bacteria 15120
91 Ga0123342_1007461 3300009766 Bacteria 14418
92 Ga0105239_10024150 3300010375 Bacteria 6695
93 Ga0157373_10014311 3300013100 Bacteria 5815
94 Ga0157371_10002516 3300013102 Bacteria 17419
95 Ga0157370_10000078 3300013104 Bacteria 107381
96 Ga0157370_10003807 3300013104 Bacteria 17597
97 Ga0157369_10018994 3300013105 Bacteria 7698
98 Ga0157369_10295077 3300013105 Bacteria 1687
99 Ga0157372_10002982 3300013307 Bacteria 18237
100 Ga0157372_10051326 3300013307 Bacteria 4589
101 Ga0182008_10000263 3300014497 Bacteria 41166
102 Ga0157379_10032848 3300014968 Bacteria 4627
103 Ga0182006_1006136 3300015261 Bacteria 5617
104 Ga0182007_10002264 3300015262 Bacteria 9701
105 Ga0182007_10007763 3300015262 Bacteria 4461
106 Ga0182005_1013106 3300015265 Bacteria 2334
107 Ga0197907_10558447 3300020069 Bacteria 1537
108 Ga0206351_10159349 3300020077 Bacteria 2819
109 Ga0154015_1305347 3300020610 Bacteria 1721
110 Ga0213875_10063410 3300021388 Bacteria 1728
111 Ga0209436_100263 3300025208 Bacteria 24024
112 Ga0209436_110154 3300025208 Bacteria 1740
113 Ga0209784_100290 3300025224 Bacteria 27838
114 Ga0209566_100422 3300025225 Bacteria 32606
115 Ga0209674_100310 3300025226 Bacteria 32606
116 Ga0209672_100291 3300025228 Bacteria 34939
117 Ga0209147_100090 3300025229 Bacteria 176176
118 Ga0209563_100200 3300025230 Bacteria 32606
119 Ga0209258_100130 3300025242 Bacteria 176078
120 Ga0207425_1005437 3300025245 Bacteria 3632
121 Ga0207425_1013533 3300025245 Bacteria 1882
122 Ga0207425_1014182 3300025245 Bacteria 1816
123 Ga0209677_100043 3300025253 Bacteria 222331
124 Ga0209677_100285 3300025253 Bacteria 33573
125 Ga0209148_1007345 3300025254 Bacteria 2298
126 Ga0209759_1003889 3300025256 Bacteria 5765
127 Ga0209129_1000280 3300025258 Bacteria 48435
128 Ga0209129_1001503 3300025258 Bacteria 12948
129 Ga0209129_1001665 3300025258 Bacteria 12031
130 Ga0209129_1005307 3300025258 Bacteria 4625
131 Ga0209233_1000201 3300025261 Bacteria 123566
132 Ga0209233_1000462 3300025261 Bacteria 26091
133 Ga0209455_1000119 3300025272 Bacteria 174994
134 Ga0209673_1001987 3300025273 Bacteria 15835
135 Ga0209673_1002267 3300025273 Bacteria 13812
136 Ga0209673_1004933 3300025273 Bacteria 6939
137 Ga0209673_1017098 3300025273 Bacteria 2683
138 Ga0209130_1000020 3300025284 Bacteria 379297
139 Ga0209130_1000035 3300025284 Bacteria 296161
140 Ga0209675_1001075 3300025291 Bacteria 16889
141 Ga0209025_1009445 3300025294 Bacteria 6791
142 Ga0209025_1014650 3300025294 Bacteria 4800
143 Ga0209564_1000059 3300025295 Bacteria 328782
144 Ga0209564_1000512 3300025295 Bacteria 63708
145 Ga0209564_1005068 3300025295 Bacteria 7691
146 Ga0209758_1000391 3300025297 Bacteria 75782
147 Ga0209758_1001296 3300025297 Bacteria 30665
148 Ga0209758_1005517 3300025297 Bacteria 9666
149 Ga0209758_1013986 3300025297 Bacteria 4314
150 Ga0209758_1031384 3300025297 Bacteria 2180
151 Ga0209050_1013304 3300025298 Bacteria 3668
152 Ga0209256_1000033 3300025299 Bacteria 393924
153 Ga0209256_1002007 3300025299 Bacteria 18212
154 Ga0209256_1003707 3300025299 Bacteria 10376
155 Ga0209256_1003867 3300025299 Bacteria 9950
156 Ga0207426_1000008 3300025302 Bacteria 848730
157 Ga0207426_1000017 3300025302 Bacteria 577913
158 Ga0207426_1000946 3300025302 Bacteria 28694
159 Ga0209051_1000097 3300025303 Bacteria 167378
160 Ga0209051_1001782 3300025303 Bacteria 17090
161 Ga0207655_1013269 3300025728 Bacteria 4743
162 Ga0207647_10002207 3300025904 Bacteria 14836
163 Ga0207707_10295351 3300025912 Bacteria 1402
164 Ga0207695_10000097 3300025913 Bacteria 262517
165 Ga0207695_10002409 3300025913 Bacteria 27691
166 Ga0207695_10266945 3300025913 Bacteria 1608
167 Ga0207671_10000023 3300025914 Bacteria 274756
168 Ga0207671_10106828 3300025914 Bacteria 2125
169 Ga0207649_10000400 3300025920 Bacteria 32409
170 Ga0207644_10115954 3300025931 Bacteria 2032
171 Ga0207690_10156595 3300025932 Bacteria 1694
172 Ga0207706_10044042 3300025933 Bacteria 3955
173 Ga0207711_10042745 3300025941 Bacteria 3861
174 Ga0207679_10000032 3300025945 Bacteria 158845
175 Ga0207640_10000419 3300025981 Bacteria 26529
176 Ga0207658_10184352 3300025986 Bacteria 1730
177 Ga0207703_10450574 3300026035 Bacteria 1202
178 Ga0207678_10001312 3300026067 Bacteria 23024
179 Ga0207678_10343871 3300026067 Unclassified 1286
180 Ga0207702_10001624 3300026078 Bacteria 22247
181 Ga0207674_10004845 3300026116 Bacteria 16114
182 Ga0207674_10021469 3300026116 Bacteria 6952
183 Ga0207698_10129434 3300026142 Bacteria 2154
184 Ga0209179_1002893 3300027512 Bacteria 2395
185 Ga0268266_10035536 3300028379 Bacteria 4239
186 Ga0268266_10041076 3300028379 Bacteria 3944
187 Ga0268266_10069160 3300028379 Bacteria 3059
188 Ga0307515_10045581 3300028794 Bacteria 6730
189 Ga0307511_10012658 3300030521 Bacteria 8265
190 Ga0307513_10018065 3300031456 Bacteria 8440
191 Ga0307408_100000174 3300031548 Bacteria 72297
192 Ga0307516_10075803 3300031730 Bacteria 3217
193 Ga0307507_10029292 3300033179 Bacteria 5841
194 Ga0307510_10218209 3300033180 Bacteria 1421
195 Ga0373927_0065545 3300035695 Bacteria 2349
196 Ga0373925_0346792 3300037068 Bacteria 1205
197 Ga0395899_0127051 3300037312 Bacteria 1823
198 Ga0395900_0020472 3300037418 Bacteria 6753
199 Ga0395898_0005012 3300037466 Bacteria 14376
200 Ga0436364_0434803 3300037853 Bacteria 1381
201 Ga0436364_1402425 3300037853 Bacteria 3136
202 Ga0436365_1061842 3300039437 Bacteria 2177
203 Ga0439465_0061839 3300041413 Bacteria 1242
204 Ga0451833_1342345 3300041491 Bacteria 1292
205 Ga0451833_1502942 3300041491 Bacteria 2173
206 Ga0451837_1803426 3300041494 Bacteria 1209
207 Ga0451839_0063527 3300041496 Bacteria 1798
208 Ga0451841_0443713 3300041498 Bacteria 1362
209 Ga0451845_0022156 3300041501 Bacteria 2777
210 Ga0451845_0329355 3300041501 Bacteria 1357
211 Ga0451845_0423609 3300041501 Bacteria 1884
212 Ga0451849_0850211 3300041505 Bacteria 3863
213 Ga0451851_0580612 3300041507 Bacteria 1647
214 Ga0451843_1449154 3300041509 Bacteria 1793
215 Ga0451843_1539147 3300041509 Bacteria 1837
216 Ga0451855_1031494 3300041511 Bacteria 3929
217 Ga0439449_0121414 3300042007 Bacteria 970
218 Ga0439458_0004610 3300042157 Bacteria 3146
219 Ga0466986_0034448 3300044650 Bacteria 3456
220 Ga0466969_0015038 3300044656 Bacteria 4059
221 Ga0466978_0021203 3300044671 Bacteria 3840
222 Ga0466965_0038796 3300044683 Bacteria 2340
223 Ga0466961_0003262 3300044693 Bacteria 10102
224 Ga0466963_0021858 3300044694 Bacteria 4043
225 Ga0466963_0182240 3300044694 Bacteria 1466
226 Ga0466971_0012066 3300044719 Bacteria 3786
227 Ga0466968_0002200 3300044735 Bacteria 7120
228 Ga0466970_0014674 3300044765 Bacteria 4024
229 Ga0466970_0068143 3300044765 Bacteria 1912
230 Ga0466957_0222743 3300044842 Bacteria 1246
231 Ga0466959_0024677 3300045049 Bacteria 4455
232 Ga0466967_0103296 3300045976 Bacteria 2608
233 Ga0495629_0189737 3300046459 Bacteria 1422
234 Ga0495638_0020874 3300046460 Bacteria 4325
235 Ga0495638_0060896 3300046460 Bacteria 2333
236 Ga0495651_0206377 3300046462 Bacteria 1371
237 Ga0495650_0047420 3300046471 Bacteria 1797
238 Ga0495605_0017662 3300046474 Bacteria 3837
239 Ga0495585_0064189 3300046492 Bacteria 2014
240 Ga0495583_0003548 3300046506 Bacteria 11767
241 Ga0495583_0017854 3300046506 Bacteria 3753
242 Ga0495606_0001436 3300046507 Bacteria 31966
243 Ga0495606_0055616 3300046507 Bacteria 2558
244 Ga0495610_0001495 3300046512 Bacteria 20547
245 Ga0495610_0024897 3300046512 Bacteria 3223
246 Ga0495620_0027816 3300046515 Bacteria 2640
247 Ga0495632_0000929 3300046519 Bacteria 25674
248 Ga0495632_0062320 3300046519 Bacteria 1808
249 Ga0495643_0004031 3300046522 Bacteria 10481
250 Ga0495643_0006767 3300046522 Bacteria 7497
251 Ga0495643_0021113 3300046522 Bacteria 3742
252 Ga0495643_0028686 3300046522 Bacteria 3118
253 Ga0495648_0047946 3300046524 Bacteria 2634
254 Ga0495648_0083618 3300046524 Bacteria 1808
255 Ga0495597_0013525 3300046542 Bacteria 3904
256 Ga0495622_0000003 3300046557 Bacteria 268681
257 Ga0495622_0042892 3300046557 Bacteria 2103
258 Ga0495633_0026292 3300046558 Bacteria 2857
259 Ga0495668_0019471 3300046616 Bacteria 3911
260 Ga0495611_0052813 3300046648 Bacteria 1834
261 Ga0495625_0140031 3300046660 Bacteria 1632
262 Ga0495625_0391816 3300046660 Bacteria 869
263 Ga0495588_0049957 3300046674 Bacteria 2152
264 Ga0495670_0069709 3300046691 Bacteria 1778
265 Ga0495671_0116554 3300046692 Bacteria 1304
266 Ga0495600_0035061 3300046809 Bacteria 3258
267 Ga0495660_0031791 3300046810 Bacteria 2966
268 Ga0495683_0027430 3300047323 Bacteria 2912
269 Ga0495687_016211 3300047443 Bacteria 3753
270 Ga0495673_0039304 3300047469 Bacteria 2147
271 Ga0495686_0000576 3300047472 Bacteria 52136
272 Ga0495686_0010696 3300047472 Bacteria 6513
273 Ga0495686_0056670 3300047472 Bacteria 2448
274 Ga0495602_0110916 3300048088 Bacteria 2229
275 Ga0495626_0083877 3300048091 Bacteria 1411
276 Ga0496100_0021694 3300048903 Bacteria 3873
277 Ga0496103_0008436 3300048906 Bacteria 6121
278 Ga0496103_0096789 3300048906 Bacteria 1865
279 Ga0496104_0003440 3300048907 Bacteria 13647
280 Ga0496105_0033177 3300048908 Bacteria 4239
281 Ga0496106_0109489 3300048909 Bacteria 2149
282 Ga0496109_0054420 3300048912 Bacteria 3651
283 Ga0496110_0070435 3300048913 Bacteria 3098
284 Ga0496111_0016949 3300048914 Bacteria 5029
285 Ga0496113_0023974 3300048916 Bacteria 4332
286 Ga0496113_0353805 3300048916 Bacteria 1178
287 Ga0496113_0373522 3300048916 Bacteria 1144
288 Ga0496114_0086790 3300048917 Bacteria 2652
289 Ga0496116_0020868 3300048919 Bacteria 4960
290 Ga0496116_0025777 3300048919 Bacteria 4314
291 Ga0496116_0089892 3300048919 Bacteria 1871
292 Ga0496117_0003601 3300048920 Bacteria 17868
293 Ga0496118_0004214 3300048921 Bacteria 17265
294 Ga0496119_0013842 3300048922 Bacteria 6375
295 Ga0496119_0032329 3300048922 Bacteria 3489
296 Ga0496120_0009292 3300048923 Bacteria 6991
297 Ga0496121_0001592 3300048924 Bacteria 37760
298 Ga0496121_0014971 3300048924 Bacteria 8169
299 Ga0496121_0237595 3300048924 Bacteria 1272
300 Ga0496122_0005361 3300048925 Bacteria 15320
301 Ga0496123_0020021 3300048926 Bacteria 5252
302 Ga0496123_0022291 3300048926 Bacteria 4886
303 Ga0496124_0007278 3300048927 Bacteria 11803
304 Ga0496124_0009249 3300048927 Bacteria 10164
305 Ga0496124_0012303 3300048927 Bacteria 8452
306 Ga0496124_0085760 3300048927 Bacteria 2579
307 Ga0496125_0012497 3300048928 Bacteria 8423
308 Ga0496125_0038329 3300048928 Bacteria 4150
309 Ga0496126_0036446 3300048929 Bacteria 4599
310 Ga0496126_0233588 3300048929 Bacteria 1539
311 Ga0501034_0369864 3300049571 Bacteria 1360
312 Ga0501047_0077843 3300049581 Bacteria 3189
313 nmdc:mga06r32_320252_c1 3300050510 Bacteria 1536
314 Ga0495601_0189587 3300053077 Bacteria 1344
315 Ga0500635_0003561 3300053080 Bacteria 3933
316 Ga0500578_0091962 3300053086 Bacteria 1924
317 Ga0500644_0023366 3300053088 Bacteria 1877
318 Ga0500644_0047657 3300053088 Bacteria 1455
319 Ga0500566_0135411 3300053094 Bacteria 1313
320 Ga0500595_017230 3300053119 Bacteria 2672
321 Ga0500618_002556 3300053125 Bacteria 6764
322 Ga0500618_008913 3300053125 Bacteria 2765
323 Ga0500658_0002915 3300053134 Bacteria 6570
324 Ga0500590_000459 3300053148 Bacteria 13845
325 Ga0500616_0028713 3300053153 Bacteria 3064
326 Ga0500620_000287 3300053155 Bacteria 9725
327 Ga0500622_0000469 3300053156 Bacteria 38108
328 Ga0500622_0000825 3300053156 Bacteria 26536
329 Ga0500622_0061068 3300053156 Bacteria 1922
330 Ga0500636_0084752 3300053177 Bacteria 1821
331 Ga0500636_0247310 3300053177 Bacteria 912
332 Ga0500611_019899 3300053727 Bacteria 1259
333 Ga0500552_007923 3300053733 Bacteria 1241
334 Ga0466962_0002174 3300061719 Bacteria 9272

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046471 Ga0495650_0047420 Ga0495650_0047420_972_1778 239
2 3300046660 Ga0495625_0391816 Ga0495625_0391816_24_830 239
3 3300048916 Ga0496113_0353805 Ga0496113_0353805_353_1159 239
4 3300049571 Ga0501034_0369864 Ga0501034_0369864_540_1346 239
5 iso_pu_bacteria 2718217725 2718634900 242
6 3300002773 JGI25152J39213_1017741 JGI25152J39213_10177412 243
7 3300009551 Ga0105238_10758423 Ga0105238_107584231 244
8 3300003323 rootH1_10146777 rootH1_101467772 250
9 iso_pu_bacteria 2513237088 2513596429 252
10 3300001979 JGI24740J21852_10013583 JGI24740J21852_100135832 259
11 3300002739 JGI25158J39367_1000086 JGI25158J39367_10000864 259
12 3300002773 JGI25152J39213_1001133 JGI25152J39213_100113310 259
13 3300002773 JGI25152J39213_1002138 JGI25152J39213_10021387 259
14 3300002987 JGI25159J45721_1000216 JGI25159J45721_10002166 259
15 3300002987 JGI25159J45721_1000441 JGI25159J45721_10004416 259
16 3300003187 JGI25151J46595_10025418 JGI25151J46595_100254182 259
17 3300003214 JGI25165J46597_1004895 JGI25165J46597_10048952 259
18 3300003215 JGI25153J46596_10005713 JGI25153J46596_100057137 259
19 3300003215 JGI25153J46596_10006291 JGI25153J46596_100062912 259
20 3300003316 rootH1_10064987 rootH1_100649872 259
21 3300003323 rootH1_10170988 rootH1_101709882 259
22 3300003354 JGI25160J50197_1000018 JGI25160J50197_1000018147 259
23 3300003354 JGI25160J50197_1016154 JGI25160J50197_10161542 259
24 3300003354 JGI25160J50197_1016686 JGI25160J50197_10166862 259
25 3300003374 JGI25161J50226_1000020 JGI25161J50226_100002081 259
26 3300003374 JGI25161J50226_1000099 JGI25161J50226_100009949 259
27 3300003374 JGI25161J50226_1002131 JGI25161J50226_10021311 259
28 3300003771 Ga0055526_1001758 Ga0055526_10017587 259
29 3300003771 Ga0055526_1004639 Ga0055526_10046394 259
30 3300003771 Ga0055526_1030306 Ga0055526_10303061 259
31 3300003775 Ga0055524_1005743 Ga0055524_10057433 259
32 3300003775 Ga0055524_1017565 Ga0055524_10175653 259
33 3300003790 Ga0055528_1009837 Ga0055528_10098375 259
34 3300003790 Ga0055528_1011012 Ga0055528_10110123 259
35 3300003792 Ga0055540_1000235 Ga0055540_100023539 259
36 3300003792 Ga0055540_1008410 Ga0055540_10084103 259
37 3300003792 Ga0055540_1010739 Ga0055540_10107391 259
38 3300004625 Ga0055543_1000004 Ga0055543_1000004148 259
39 3300004625 Ga0055543_1000289 Ga0055543_10002899 259
40 3300005262 Ga0065165_1000065 Ga0065165_1000065148 259
41 3300005262 Ga0065165_1009564 Ga0065165_10095644 259
42 3300005347 Ga0070668_100036339 Ga0070668_1000363393 259
43 3300005355 Ga0070671_100069150 Ga0070671_1000691503 259
44 3300005367 Ga0070667_100020906 Ga0070667_1000209065 259
45 3300005455 Ga0070663_100013849 Ga0070663_1000138493 259
46 3300005548 Ga0070665_100146159 Ga0070665_1001461592 259
47 3300006038 Ga0075365_10008214 Ga0075365_100082145 259
48 3300006048 Ga0075363_100119332 Ga0075363_1001193322 259
49 3300006177 Ga0075362_10056920 Ga0075362_100569202 259
50 3300006186 Ga0075369_10000198 Ga0075369_1000019811 259
51 3300006186 Ga0075369_10016227 Ga0075369_100162273 259
52 3300006353 Ga0075370_10026493 Ga0075370_100264934 259
53 3300006353 Ga0075370_10252278 Ga0075370_102522781 259
54 3300009036 Ga0105244_10026268 Ga0105244_100262683 259
55 3300009092 Ga0105250_10034526 Ga0105250_100345262 259
56 3300009093 Ga0105240_10000012 Ga0105240_10000012291 259
57 3300009545 Ga0105237_10000054 Ga0105237_1000005457 259
58 3300009765 Ga0123341_1000007 Ga0123341_1000007132 259
59 3300009766 Ga0123342_1007059 Ga0123342_10070594 259
60 3300009766 Ga0123342_1007461 Ga0123342_10074617 259
61 3300010375 Ga0105239_10024150 Ga0105239_100241506 259
62 3300013104 Ga0157370_10000078 Ga0157370_1000007896 259
63 3300015262 Ga0182007_10002264 Ga0182007_100022644 259
64 3300015265 Ga0182005_1013106 Ga0182005_10131062 259
65 3300025208 Ga0209436_100263 Ga0209436_1002632 259
66 3300025208 Ga0209436_110154 Ga0209436_1101542 259
67 3300025245 Ga0207425_1005437 Ga0207425_10054372 259
68 3300025245 Ga0207425_1013533 Ga0207425_10135332 259
69 3300025245 Ga0207425_1014182 Ga0207425_10141821 259
70 3300025253 Ga0209677_100285 Ga0209677_10028525 259
71 3300025258 Ga0209129_1000280 Ga0209129_100028037 259
72 3300025258 Ga0209129_1001503 Ga0209129_100150311 259
73 3300025258 Ga0209129_1001665 Ga0209129_10016653 259
74 3300025258 Ga0209129_1005307 Ga0209129_10053073 259
75 3300025261 Ga0209233_1000201 Ga0209233_100020134 259
76 3300025273 Ga0209673_1001987 Ga0209673_10019877 259
77 3300025273 Ga0209673_1002267 Ga0209673_100226711 259
78 3300025273 Ga0209673_1004933 Ga0209673_10049333 259
79 3300025273 Ga0209673_1017098 Ga0209673_10170981 259
80 3300025284 Ga0209130_1000020 Ga0209130_1000020314 259
81 3300025284 Ga0209130_1000035 Ga0209130_100003578 259
82 3300025294 Ga0209025_1009445 Ga0209025_10094453 259
83 3300025294 Ga0209025_1014650 Ga0209025_10146504 259
84 3300025295 Ga0209564_1000512 Ga0209564_100051220 259
85 3300025295 Ga0209564_1005068 Ga0209564_10050684 259
86 3300025297 Ga0209758_1000391 Ga0209758_100039165 259
87 3300025297 Ga0209758_1001296 Ga0209758_100129616 259
88 3300025297 Ga0209758_1005517 Ga0209758_10055179 259
89 3300025297 Ga0209758_1013986 Ga0209758_10139864 259
90 3300025297 Ga0209758_1031384 Ga0209758_10313842 259
91 3300025298 Ga0209050_1013304 Ga0209050_10133042 259
92 3300025299 Ga0209256_1002007 Ga0209256_100200715 259
93 3300025299 Ga0209256_1003707 Ga0209256_10037076 259
94 3300025299 Ga0209256_1003867 Ga0209256_10038676 259
95 3300025302 Ga0207426_1000008 Ga0207426_1000008381 259
96 3300025302 Ga0207426_1000017 Ga0207426_100001778 259
97 3300025302 Ga0207426_1000946 Ga0207426_10009462 259
98 3300025303 Ga0209051_1000097 Ga0209051_10000977 259
99 3300025303 Ga0209051_1001782 Ga0209051_100178215 259
100 3300025728 Ga0207655_1013269 Ga0207655_10132692 259
101 3300025913 Ga0207695_10000097 Ga0207695_1000009781 259
102 3300025914 Ga0207671_10000023 Ga0207671_10000023164 259
103 3300025931 Ga0207644_10115954 Ga0207644_101159542 259
104 3300025986 Ga0207658_10184352 Ga0207658_101843521 259
105 3300026142 Ga0207698_10129434 Ga0207698_101294343 259
106 3300028379 Ga0268266_10069160 Ga0268266_100691602 259
107 3300031456 Ga0307513_10018065 Ga0307513_100180654 259
108 3300041413 Ga0439465_0061839 Ga0439465_0061839_168_1070 259
109 3300041491 Ga0451833_1342345 Ga0451833_1342345_152_1054 259
110 3300041491 Ga0451833_1502942 Ga0451833_1502942_660_1562 259
111 3300041494 Ga0451837_1803426 Ga0451837_1803426_152_1054 259
112 3300041496 Ga0451839_0063527 Ga0451839_0063527_676_1578 259
113 3300041498 Ga0451841_0443713 Ga0451841_0443713_432_1334 259
114 3300041501 Ga0451845_0022156 Ga0451845_0022156_432_1334 259
115 3300041501 Ga0451845_0329355 Ga0451845_0329355_159_1061 259
116 3300041501 Ga0451845_0423609 Ga0451845_0423609_778_1680 259
117 3300041505 Ga0451849_0850211 Ga0451849_0850211_2730_3632 259
118 3300041507 Ga0451851_0580612 Ga0451851_0580612_357_1259 259
119 3300041509 Ga0451843_1449154 Ga0451843_1449154_756_1658 259
120 3300041509 Ga0451843_1539147 Ga0451843_1539147_724_1626 259
121 3300041511 Ga0451855_1031494 Ga0451855_1031494_705_1607 259
122 3300042007 Ga0439449_0121414 Ga0439449_0121414_43_945 259
123 3300044694 Ga0466963_0021858 Ga0466963_0021858_1452_2321 259
124 3300046460 Ga0495638_0020874 Ga0495638_0020874_345_1247 259
125 3300046474 Ga0495605_0017662 Ga0495605_0017662_2244_3146 259
126 3300046506 Ga0495583_0003548 Ga0495583_0003548_7866_8768 259
127 3300046506 Ga0495583_0017854 Ga0495583_0017854_2297_3199 259
128 3300046507 Ga0495606_0001436 Ga0495606_0001436_20440_21342 259
129 3300046507 Ga0495606_0055616 Ga0495606_0055616_24_926 259
130 3300046512 Ga0495610_0001495 Ga0495610_0001495_8583_9485 259
131 3300046512 Ga0495610_0024897 Ga0495610_0024897_311_1213 259
132 3300046515 Ga0495620_0027816 Ga0495620_0027816_1181_2083 259
133 3300046519 Ga0495632_0000929 Ga0495632_0000929_14601_15503 259
134 3300046519 Ga0495632_0062320 Ga0495632_0062320_529_1431 259
135 3300046522 Ga0495643_0004031 Ga0495643_0004031_8895_9797 259
136 3300046522 Ga0495643_0006767 Ga0495643_0006767_1082_1984 259
137 3300046522 Ga0495643_0021113 Ga0495643_0021113_1134_2036 259
138 3300046522 Ga0495643_0028686 Ga0495643_0028686_439_1341 259
139 3300046524 Ga0495648_0047946 Ga0495648_0047946_1119_2021 259
140 3300046542 Ga0495597_0013525 Ga0495597_0013525_1344_2246 259
141 3300046558 Ga0495633_0026292 Ga0495633_0026292_768_1670 259
142 3300046616 Ga0495668_0019471 Ga0495668_0019471_2648_3550 259
143 3300046648 Ga0495611_0052813 Ga0495611_0052813_843_1745 259
144 3300046660 Ga0495625_0140031 Ga0495625_0140031_79_981 259
145 3300046691 Ga0495670_0069709 Ga0495670_0069709_574_1476 259
146 3300046692 Ga0495671_0116554 Ga0495671_0116554_382_1284 259
147 3300046810 Ga0495660_0031791 Ga0495660_0031791_319_1221 259
148 3300047323 Ga0495683_0027430 Ga0495683_0027430_1674_2576 259
149 3300047443 Ga0495687_016211 Ga0495687_016211_210_1112 259
150 3300047469 Ga0495673_0039304 Ga0495673_0039304_788_1690 259
151 3300047472 Ga0495686_0000576 Ga0495686_0000576_3885_4787 259
152 3300047472 Ga0495686_0010696 Ga0495686_0010696_2508_3410 259
153 3300048091 Ga0495626_0083877 Ga0495626_0083877_487_1389 259
154 3300048903 Ga0496100_0021694 Ga0496100_0021694_1959_2861 259
155 3300048906 Ga0496103_0008436 Ga0496103_0008436_3324_4226 259
156 3300048906 Ga0496103_0096789 Ga0496103_0096789_29_898 259
157 3300048907 Ga0496104_0003440 Ga0496104_0003440_7619_8521 259
158 3300048908 Ga0496105_0033177 Ga0496105_0033177_1147_2049 259
159 3300048909 Ga0496106_0109489 Ga0496106_0109489_653_1555 259
160 3300048912 Ga0496109_0054420 Ga0496109_0054420_2479_3381 259
161 3300048913 Ga0496110_0070435 Ga0496110_0070435_1361_2263 259
162 3300048914 Ga0496111_0016949 Ga0496111_0016949_2938_3840 259
163 3300048916 Ga0496113_0023974 Ga0496113_0023974_1263_2165 259
164 3300048917 Ga0496114_0086790 Ga0496114_0086790_865_1767 259
165 3300048919 Ga0496116_0020868 Ga0496116_0020868_3045_3947 259
166 3300048919 Ga0496116_0089892 Ga0496116_0089892_841_1743 259
167 3300048920 Ga0496117_0003601 Ga0496117_0003601_5918_6820 259
168 3300048921 Ga0496118_0004214 Ga0496118_0004214_11230_12132 259
169 3300048922 Ga0496119_0013842 Ga0496119_0013842_2708_3610 259
170 3300048922 Ga0496119_0032329 Ga0496119_0032329_2370_3239 259
171 3300048923 Ga0496120_0009292 Ga0496120_0009292_2638_3540 259
172 3300048924 Ga0496121_0001592 Ga0496121_0001592_8373_9275 259
173 3300048924 Ga0496121_0014971 Ga0496121_0014971_1689_2591 259
174 3300048925 Ga0496122_0005361 Ga0496122_0005361_13269_14171 259
175 3300048926 Ga0496123_0020021 Ga0496123_0020021_2078_2980 259
176 3300048926 Ga0496123_0022291 Ga0496123_0022291_1805_2707 259
177 3300048927 Ga0496124_0007278 Ga0496124_0007278_2897_3799 259
178 3300048927 Ga0496124_0009249 Ga0496124_0009249_631_1533 259
179 3300048927 Ga0496124_0012303 Ga0496124_0012303_2759_3661 259
180 3300048927 Ga0496124_0085760 Ga0496124_0085760_643_1545 259
181 3300048928 Ga0496125_0012497 Ga0496125_0012497_2155_3057 259
182 3300048929 Ga0496126_0036446 Ga0496126_0036446_2690_3592 259
183 3300048929 Ga0496126_0233588 Ga0496126_0233588_475_1377 259
184 3300049581 Ga0501047_0077843 Ga0501047_0077843_848_1750 259
185 3300053086 Ga0500578_0091962 Ga0500578_0091962_772_1674 259
186 3300053125 Ga0500618_002556 Ga0500618_002556_2086_2988 259
187 3300053125 Ga0500618_008913 Ga0500618_008913_1492_2394 259
188 3300053134 Ga0500658_0002915 Ga0500658_0002915_1105_2007 259
189 3300053153 Ga0500616_0028713 Ga0500616_0028713_530_1432 259
190 3300053156 Ga0500622_0000825 Ga0500622_0000825_18922_19824 259
191 3300053156 Ga0500622_0061068 Ga0500622_0061068_282_1184 259
192 3300053177 Ga0500636_0247310 Ga0500636_0247310_15_884 259
193 iso_pu_bacteria 2510461076 2510895320 259
194 iso_pu_bacteria 2510917022 2511132614 259
195 iso_pu_bacteria 2510917028 2511187008 259
196 iso_pu_bacteria 2510917030 2511194535 259
197 iso_pu_bacteria 2513237085 2513576890 259
198 iso_pu_bacteria 2513237138 2513865550 259
199 iso_pu_bacteria 2529292951 2530646010 259
200 iso_pu_bacteria 2534681796 2535516819 259
201 iso_pu_bacteria 2582581299 2585231688 259
202 iso_pu_bacteria 2582581307 2585275574 259
203 iso_pu_bacteria 2582581308 2585278207 259
204 iso_pu_bacteria 2582581315 2585324978 259
205 iso_pu_bacteria 2582581316 2585332835 259
206 iso_pu_bacteria 2585427527 2585532133 259
207 iso_pu_bacteria 2585427530 2585552494 259
208 iso_pu_bacteria 2585427531 2585562570 259
209 iso_pu_bacteria 2615840626 2616307725 259
210 iso_pu_bacteria 2617270742 2617382778 259
211 iso_pu_bacteria 2643221634 2644193452 259
212 iso_pu_bacteria 2718217927 2719386359 259
213 iso_pu_bacteria 2718218423 2721400064 259
214 iso_pu_bacteria 2721755809 2724038877 259
215 iso_pu_bacteria 2775507266 2778178392 259
216 iso_pu_bacteria 2791355267 2793368928 259
217 iso_pu_bacteria 2818991453 2819640379 259
218 iso_pu_bacteria 2842482326 2842487031 259
219 iso_pu_bacteria 2852387548 2852394887 259
220 iso_pu_bacteria 2936381700 2936382860 259
221 iso_pu_bacteria 2996887358 2996889087 259
222 iso_pu_bacteria 2996893221 2996894392 259
223 iso_pu_bacteria 8005275841 8005281156 259
224 iso_pu_bacteria 8005484373 8005487467 259
225 iso_pu_bacteria 8018176218 8018181378 259
226 iso_pu_bacteria 8046767195 8046771440 259
227 iso_pu_bacteria 8057575449 8057576209 259
228 3300005455 Ga0070663_100317725 Ga0070663_1003177252 260
229 3300005458 Ga0070681_10344636 Ga0070681_103446361 260
230 3300009545 Ga0105237_10295393 Ga0105237_102953932 260
231 3300025912 Ga0207707_10295351 Ga0207707_102953512 260
232 3300026035 Ga0207703_10450574 Ga0207703_104505742 260
233 3300026067 Ga0207678_10343871 Ga0207678_103438712 260
234 3300028794 Ga0307515_10045581 Ga0307515_100455818 260
235 3300033180 Ga0307510_10218209 Ga0307510_102182091 260
236 3300046459 Ga0495629_0189737 Ga0495629_0189737_87_992 260
237 3300046460 Ga0495638_0060896 Ga0495638_0060896_1436_2308 260
238 3300046462 Ga0495651_0206377 Ga0495651_0206377_90_995 260
239 3300046524 Ga0495648_0083618 Ga0495648_0083618_781_1686 260
240 3300046557 Ga0495622_0042892 Ga0495622_0042892_575_1480 260
241 3300046674 Ga0495588_0049957 Ga0495588_0049957_926_1831 260
242 3300046809 Ga0495600_0035061 Ga0495600_0035061_1865_2770 260
243 3300048088 Ga0495602_0110916 Ga0495602_0110916_975_1880 260
244 3300053077 Ga0495601_0189587 Ga0495601_0189587_357_1262 260
245 3300053148 Ga0500590_000459 Ga0500590_000459_4231_5136 260
246 3300053156 Ga0500622_0000469 Ga0500622_0000469_32276_33181 260
247 iso_pu_bacteria 2582581306 2585267535 260
248 iso_pu_bacteria 2978969890 2978974347 260
249 iso_pu_bacteria 2984587000 2984589688 260
250 iso_pu_bacteria 8024486573 8024487973 260
251 iso_pu_bacteria 8054558443 8054560584 260
252 3300030521 Ga0307511_10012658 Ga0307511_100126582 261
253 3300053088 Ga0500644_0047657 Ga0500644_0047657_260_1195 261
254 3300006946 Ga0079104_1009466 Ga0079104_10094666 262
255 3300014497 Ga0182008_10000263 Ga0182008_1000026329 262
256 3300005548 Ga0070665_100063531 Ga0070665_1000635311 263
257 3300009177 Ga0105248_10285407 Ga0105248_102854072 263
258 3300025941 Ga0207711_10042745 Ga0207711_100427452 263
259 3300028379 Ga0268266_10035536 Ga0268266_100355361 263
260 3300047472 Ga0495686_0056670 Ga0495686_0056670_71_952 263
261 3300048919 Ga0496116_0025777 Ga0496116_0025777_1794_2675 263
262 3300048924 Ga0496121_0237595 Ga0496121_0237595_53_934 263
263 3300003771 Ga0055526_1011013 Ga0055526_10110134 264
264 3300003775 Ga0055524_1004704 Ga0055524_10047044 264
265 3300031548 Ga0307408_100000174 Ga0307408_10000017447 264
266 3300037068 Ga0373925_0346792 Ga0373925_0346792_286_1188 264
267 3300003775 Ga0055524_1000065 Ga0055524_100006594 265
268 3300005548 Ga0070665_100003615 Ga0070665_10000361512 265
269 3300006847 Ga0075431_100421583 Ga0075431_1004215832 265
270 3300009093 Ga0105240_10221632 Ga0105240_102216321 265
271 3300009545 Ga0105237_10023495 Ga0105237_100234955 265
272 3300014968 Ga0157379_10032848 Ga0157379_100328482 265
273 3300025291 Ga0209675_1001075 Ga0209675_100107512 265
274 3300025295 Ga0209564_1000059 Ga0209564_1000059214 265
275 3300025299 Ga0209256_1000033 Ga0209256_100003328 265
276 3300025913 Ga0207695_10266945 Ga0207695_102669451 265
277 3300025914 Ga0207671_10106828 Ga0207671_101068282 265
278 3300028379 Ga0268266_10041076 Ga0268266_100410762 265
279 3300050510 nmdc:mga06r32_320252_c1 nmdc:mga06r32_320252_c1_246_1148 265
280 3300044694 Ga0466963_0182240 Ga0466963_0182240_504_1391 266
281 3300046557 Ga0495622_0000003 Ga0495622_0000003_75619_76524 266
282 iso_pu_bacteria 2842395702 2842399932 266
283 3300053155 Ga0500620_000287 Ga0500620_000287_274_1203 267
284 3300053088 Ga0500644_0023366 Ga0500644_0023366_393_1310 268
285 3300053727 Ga0500611_019899 Ga0500611_019899_237_1160 268
286 iso_pu_bacteria 2937848649 2937851169 268
287 iso_pu_bacteria 2977922695 2977923505 268
288 iso_pu_bacteria 3004211236 3004212838 268
289 iso_pu_bacteria 3004218560 3004223046 268
290 3300001979 JGI24740J21852_10000547 JGI24740J21852_1000054710 269
291 3300015262 Ga0182007_10007763 Ga0182007_100077632 269
292 iso_pu_bacteria 2643221595 2643988647 269
293 iso_pu_bacteria 2643221627 2644157826 269
294 3300001989 JGI24739J22299_10008659 JGI24739J22299_100086593 270
295 3300001989 JGI24739J22299_10033434 JGI24739J22299_100334342 270
296 3300005366 Ga0070659_100093565 Ga0070659_1000935652 270
297 3300005458 Ga0070681_10329986 Ga0070681_103299861 270
298 3300005937 Ga0081455_10019611 Ga0081455_100196113 270
299 3300013105 Ga0157369_10295077 Ga0157369_102950772 270
300 3300013307 Ga0157372_10051326 Ga0157372_100513263 270
301 3300021388 Ga0213875_10063410 Ga0213875_100634102 270
302 3300025254 Ga0209148_1007345 Ga0209148_10073452 270
303 3300025261 Ga0209233_1000462 Ga0209233_100046222 270
304 3300025904 Ga0207647_10002207 Ga0207647_100022077 270
305 3300025932 Ga0207690_10156595 Ga0207690_101565952 270
306 3300025933 Ga0207706_10044042 Ga0207706_100440422 270
307 3300026116 Ga0207674_10021469 Ga0207674_100214692 270
308 3300027512 Ga0209179_1002893 Ga0209179_10028932 270
309 3300031730 Ga0307516_10075803 Ga0307516_100758032 270
310 3300033179 Ga0307507_10029292 Ga0307507_100292923 270
311 3300035695 Ga0373927_0065545 Ga0373927_0065545_1107_2075 270
312 3300037853 Ga0436364_0434803 Ga0436364_0434803_260_1216 270
313 3300037853 Ga0436364_1402425 Ga0436364_1402425_266_1225 270
314 3300039437 Ga0436365_1061842 Ga0436365_1061842_579_1538 270
315 3300042157 Ga0439458_0004610 Ga0439458_0004610_125_1078 270
316 3300044765 Ga0466970_0068143 Ga0466970_0068143_520_1479 270
317 3300044842 Ga0466957_0222743 Ga0466957_0222743_273_1232 270
318 3300046492 Ga0495585_0064189 Ga0495585_0064189_75_1025 270
319 3300048916 Ga0496113_0373522 Ga0496113_0373522_93_1100 270
320 3300053080 Ga0500635_0003561 Ga0500635_0003561_248_1216 270
321 3300053094 Ga0500566_0135411 Ga0500566_0135411_247_1203 270
322 3300053119 Ga0500595_017230 Ga0500595_017230_1382_2350 270
323 3300053177 Ga0500636_0084752 Ga0500636_0084752_256_1224 270
324 3300053733 Ga0500552_007923 Ga0500552_007923_163_1131 270
325 iso_pu_bacteria 2508501128 2509150295 270
326 iso_pu_bacteria 2885266251 2885269548 270
327 iso_pu_bacteria 2922386360 2922388434 270
328 iso_pu_bacteria 8006964411 8006969446 270
329 iso_pu_bacteria 8006994254 8007000495 270
330 3300037312 Ga0395899_0127051 Ga0395899_0127051_198_1193 271
331 3300037466 Ga0395898_0005012 Ga0395898_0005012_13249_14244 271
332 3300044656 Ga0466969_0015038 Ga0466969_0015038_1379_2302 271
333 3300044671 Ga0466978_0021203 Ga0466978_0021203_2169_3092 271
334 3300044683 Ga0466965_0038796 Ga0466965_0038796_1002_1925 271
335 3300044693 Ga0466961_0003262 Ga0466961_0003262_2192_3115 271
336 3300044719 Ga0466971_0012066 Ga0466971_0012066_915_1838 271
337 3300044735 Ga0466968_0002200 Ga0466968_0002200_212_1135 271
338 3300044765 Ga0466970_0014674 Ga0466970_0014674_919_1842 271
339 3300045049 Ga0466959_0024677 Ga0466959_0024677_1351_2274 271
340 3300061719 Ga0466962_0002174 Ga0466962_0002174_6992_7915 271
341 3300001915 JGI24741J21665_1000644 JGI24741J21665_10006446 272
342 3300001979 JGI24740J21852_10002077 JGI24740J21852_100020777 272
343 3300002705 JGI25156J39149_1011966 JGI25156J39149_10119662 272
344 3300003578 Ga0006562J51391_1025878 Ga0006562J51391_10258782 272
345 3300003751 Ga0055538_1001720 Ga0055538_10017202 272
346 3300003751 Ga0055538_1002010 Ga0055538_10020102 272
347 3300003752 Ga0055539_1000367 Ga0055539_100036710 272
348 3300003758 Ga0055532_1000378 Ga0055532_10003786 272
349 3300003759 Ga0055525_1000521 Ga0055525_100052110 272
350 3300003760 Ga0055527_1000938 Ga0055527_10009386 272
351 3300003761 Ga0055535_1000796 Ga0055535_10007966 272
352 3300003763 Ga0055529_1000691 Ga0055529_10006916 272
353 3300005344 Ga0070661_100000792 Ga0070661_10000079210 272
354 3300005455 Ga0070663_100000480 Ga0070663_1000004805 272
355 3300005564 Ga0070664_100000356 Ga0070664_10000035619 272
356 3300005578 Ga0068854_100000833 Ga0068854_10000083310 272
357 3300005614 Ga0068856_100001727 Ga0068856_10000172710 272
358 3300009093 Ga0105240_10049197 Ga0105240_100491972 272
359 3300013100 Ga0157373_10014311 Ga0157373_100143113 272
360 3300013102 Ga0157371_10002516 Ga0157371_100025163 272
361 3300013104 Ga0157370_10003807 Ga0157370_100038073 272
362 3300013105 Ga0157369_10018994 Ga0157369_100189944 272
363 3300013307 Ga0157372_10002982 Ga0157372_100029825 272
364 3300015261 Ga0182006_1006136 Ga0182006_10061362 272
365 3300020069 Ga0197907_10558447 Ga0197907_105584472 272
366 3300020077 Ga0206351_10159349 Ga0206351_101593492 272
367 3300020610 Ga0154015_1305347 Ga0154015_13053472 272
368 3300025224 Ga0209784_100290 Ga0209784_1002903 272
369 3300025225 Ga0209566_100422 Ga0209566_1004226 272
370 3300025226 Ga0209674_100310 Ga0209674_1003106 272
371 3300025228 Ga0209672_100291 Ga0209672_1002916 272
372 3300025229 Ga0209147_100090 Ga0209147_100090160 272
373 3300025230 Ga0209563_100200 Ga0209563_1002006 272
374 3300025242 Ga0209258_100130 Ga0209258_100130159 272
375 3300025253 Ga0209677_100043 Ga0209677_100043215 272
376 3300025256 Ga0209759_1003889 Ga0209759_10038893 272
377 3300025272 Ga0209455_1000119 Ga0209455_100011923 272
378 3300025913 Ga0207695_10002409 Ga0207695_1000240914 272
379 3300025920 Ga0207649_10000400 Ga0207649_1000040019 272
380 3300025945 Ga0207679_10000032 Ga0207679_1000003219 272
381 3300025981 Ga0207640_10000419 Ga0207640_1000041911 272
382 3300026067 Ga0207678_10001312 Ga0207678_1000131210 272
383 3300026078 Ga0207702_10001624 Ga0207702_100016246 272
384 3300026116 Ga0207674_10004845 Ga0207674_1000484510 272
385 3300037418 Ga0395900_0020472 Ga0395900_0020472_1984_2904 272
386 3300044650 Ga0466986_0034448 Ga0466986_0034448_1823_2743 272
387 3300045976 Ga0466967_0103296 Ga0466967_0103296_889_1809 272
388 3300048928 Ga0496125_0038329 Ga0496125_0038329_1001_1921 272
389 iso_pu_bacteria 2596583598 2597031666 272
390 iso_pu_bacteria 2599185178 2599448131 272
391 iso_pu_bacteria 2928058823 2928063747 272

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03466

LysR_substrate

LysR substrate binding domain

80

288

0.95

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

10

57

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hhf-assembly1.cif.gz_A structure of crga regulatory domain, a lysr-type transcriptional regulator from neisseria meningitidis. 0.9142 57 258
3hhf-assembly1.cif.gz_B structure of crga regulatory domain, a lysr-type transcriptional regulator from neisseria meningitidis. 0.9019 57 257
3hhf-assembly1.cif.gz_A structure of crga regulatory domain, a lysr-type transcriptional regulator from neisseria meningitidis. 0.8972 57 258
3mz1-assembly1.cif.gz_A the crystal structure of a possible transcription regulator protein from sinorhizobium meliloti 1021 0.8846 57 262
5x0n-assembly2.cif.gz_B regulatory domain of variant c227s aphb from vibrio vulnificus 0.8811 58 257
ID Description Score Start End Superfamily
af_P67662_87_293_3.40.190.290 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2; 0.9318 54 258 3.40.190.290
af_P37641_88_293_3.40.190.290 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2; 0.922 57 257 3.40.190.290
5mmhB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9163 58 125 3.40.190.10
af_P67662_87_293_3.40.190.290 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2; 0.9147 54 258 3.40.190.290
4wkmA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8983 57 125 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A7Y4T7C7-F1-model_v4 LysR family transcriptional regulator 0.9652 75 257 GO:0003700
GO:0006351
GO:0043565
AF-A0A5F0LPX3-F1-model_v4 LysR family transcriptional regulator 0.9576 128 260
AF-A0A240B5D6-F1-model_v4 D-malate degradation protein R 0.9224 65 262 GO:0003700
GO:0006351
GO:0043565
AF-A0A356JHX6-F1-model_v4 deleted 0.9195 77 258
AF-A0A447RL40-F1-model_v4 LysR family transcriptional regulator 0.9194 60 264 GO:0003700
GO:0006351
GO:0043565

Feature Viewer

pLDDT pTM Quality
87.76 0.75 High
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Predicted Structure (AlphaFold2)

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