F430592

General Info

Members Datasets Scaffolds Average Seq Length
386 320 231 253

Family's Representative Sequence

Representative Sequence 3300044684|Ga0466966_0025020|Ga0466966_0025020_1473_2234
Length 253
Sequence VSVVIDLNADLGEGFGMWRLGDDAALLSIVTSANVACGFHAGDPLIISTTCEAAAARGVAIGAQVSYRDLAGFGRRAMDVPPEELTAEVLYQLAAVDGIARSHGSRVGYVKPHGALYNRVVGDEVQARAVVAAVRAYDPALPILTLPTSAVRDVADGQPTVPECYADRAYTPQGTLVSRREPGAVIHDPAVVAGRAVRMATEHTVAAIDGSPVGVEARSICVHGDTPGAVEIARAVRAALTDAGVSLTPFAHV

Samples

Sample ID Description Type Environment
1 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
2 2509276019 Ensifer aridi TW10 Isolate Nodule
3 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
4 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
5 2511231156 Pseudomonas ogarae F113 Isolate Rhizosphere
6 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
7 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
8 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
9 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
10 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
11 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
12 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
13 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
14 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
15 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
16 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
17 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
18 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
19 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
20 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
21 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
22 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
23 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
24 2643221558 Rhizobium sp. Root149 Isolate Unclassified
25 2643221568 Rhizobium sp. Root564 Isolate Unclassified
26 2643221582 Rhizobium sp. Root651 Isolate Unclassified
27 2643221607 Rhizobium sp. Root73 Isolate Unclassified
28 2643221616 Leifsonia sp. Root227 Isolate Unclassified
29 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
30 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
31 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
32 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
33 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
34 2643221693 Rhizobium sp. Root491 Isolate Unclassified
35 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
36 2675903515 Pseudomonas thivervalensis DSM 13194 Isolate Unclassified
37 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
38 2718218199 Rhizobium phaseoli sv. phaseoli N261 Isolate Nodule
39 2718218232 Rhizobium phaseoli sv. phaseoli N161 Isolate Nodule
40 2718218233 Rhizobium phaseoli sv. phaseoli R744 Isolate Nodule
41 2718218235 Rhizobium phaseoli sv. phaseoli R620 Isolate Nodule
42 2718218269 Rhizobium phaseoli sv. phaseoli N671 Isolate Nodule
43 2721755556 Rhizobium phaseoli sv. phaseoli N931 Isolate Nodule
44 2721755684 Rhizobium phaseoli sv. phaseoli N841 Isolate Nodule
45 2721755685 Rhizobium phaseoli sv. phaseoli R611 Isolate Nodule
46 2721755819 Rhizobium phaseoli sv. phaseoli N771 Isolate Nodule
47 2721755822 Rhizobium phaseoli sv. phaseoli R650 Isolate Nodule
48 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
49 2728369352 Rhizobium phaseoli sv. phaseoli N831 Isolate Nodule
50 2744054620 Pseudomonas thivervalensis LMG 21626 Isolate Unclassified
51 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
52 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
53 2791355256 Rhizobium sp. M10 Isolate Nodule
54 2791355260 Rhizobium sp. L9 Isolate Nodule
55 2791355262 Rhizobium sp. M1 Isolate Nodule
56 2791355267 Rhizobium sp. L18 Isolate Nodule
57 2791355520 Pseudomonas sp. s211(2017) Isolate Unclassified
58 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
59 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
60 2808606382 Pseudomonas sp. SJZ080 Isolate Rhizosphere
61 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
62 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
63 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
64 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
65 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
66 2838048938 Rhizobium pisi 27/80 Isolate Nodule
67 2838061910 Rhizobium phaseoli L15 Isolate Nodule
68 2838068647 Rhizobium esperanzae VC28 Isolate Nodule
69 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
70 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
71 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
72 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
73 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
74 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
75 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
76 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
77 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
78 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
79 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
80 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
81 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
82 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
83 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
84 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
85 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
86 2842422224 Rhizobium esperanzae SEMIA 4042 Isolate Nodule
87 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
88 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
89 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
90 2842447887 Rhizobium esperanzae SEMIA 4055 Isolate Nodule
91 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
92 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
93 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
94 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
95 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
96 2862574272 Streptomyces sp. AcE210 Isolate Nodule
97 2867475112 Streptomyces sp. TM32 Isolate Unclassified
98 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
99 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
100 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
101 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
102 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
103 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
104 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
105 2913036834 Pseudomonas viciae 11K1 Isolate Rhizosphere
106 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
107 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
108 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
109 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
110 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
111 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
112 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
113 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
114 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
115 2928153084 Leifsonia sp. 563 Isolate Unclassified
116 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
117 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
118 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
119 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
120 2933599457 Rhizobium phaseoli M3 Isolate Nodule
121 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
122 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
123 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
124 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
125 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
126 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
127 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
128 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
129 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
130 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
131 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
132 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
133 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
134 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
135 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
136 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
137 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
138 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
139 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
140 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
141 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
142 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
143 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
144 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
145 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
146 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
147 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
148 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
149 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
150 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
151 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
152 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
153 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
154 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
155 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
156 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
157 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
158 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
159 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
160 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
161 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
162 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
163 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
164 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
165 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
166 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
167 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
168 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
169 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
170 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
171 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
172 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
173 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
174 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
175 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
176 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
177 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
178 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
179 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
180 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
181 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
182 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
183 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
184 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
185 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
186 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
187 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
188 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
189 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
190 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
191 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
192 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
193 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
194 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
195 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
196 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
197 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
198 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
199 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
200 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
201 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
202 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
203 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
204 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
205 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
206 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
207 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
208 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
209 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
210 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
211 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
212 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
213 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
214 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
215 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
216 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
217 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
218 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
219 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
220 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
221 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
222 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
223 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
224 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
225 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
226 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
227 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
228 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
229 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
230 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
231 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
232 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
233 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
234 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
235 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
236 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
237 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
238 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
239 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
240 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
241 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
242 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
243 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
244 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
245 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
246 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
247 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
248 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
249 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
250 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
251 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
252 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
253 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
254 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
255 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
256 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
257 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
258 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
259 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
260 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
261 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
262 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
263 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
264 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
265 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
266 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
267 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
268 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
269 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
270 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
271 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
272 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
273 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
274 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
275 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
276 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
277 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
278 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
279 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
280 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
281 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
282 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
283 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
284 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
285 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
286 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
287 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
288 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
289 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
290 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
291 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
292 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
293 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
294 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
295 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
296 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
297 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
298 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
299 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
300 3300059510 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 55R_CD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
301 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
302 3300060344 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 36R_AW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
303 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
304 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
305 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
306 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
307 8005282627 Rhizobium phaseoli NC1 Isolate Nodule
308 8005289223 Rhizobium bangladeshense 1002 Isolate Nodule
309 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
310 8005497431 Rhizobium phaseoli CCGM8 Isolate Unclassified
311 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
312 8005626139 Rhizobium phaseoli Y18 Isolate Nodule
313 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
314 8005668836 Rhizobium phaseoli CCGM9 Isolate Unclassified
315 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
316 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
317 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified
318 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
319 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
320 8056375014 Rhizobium redzepovicii 18T Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 58.29
Metatranscriptomes 1.55
Isolates 40.16

Biome Distribution

Category Percentage (%)
Aerial Root 1.04
Bulb 0
Endosphere 16.06
Nodule 18.91
Rhizoplane 1.55
Rhizosphere 38.34
Stem 0
Stem Tuber 0.26
Unclassified 23.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10034029 3300001990 Bacteria 1581
2 JGI25162J39368_1001988 3300002737 Bacteria 9137
3 JGI25165J46597_1000269 3300003214 Bacteria 67008
4 rootL2_10081674 3300003322 Bacteria 3033
5 Ga0006562J51391_1193684 3300003578 Bacteria 8992
6 Ga0006562J51391_1193685 3300003578 Bacteria 8950
7 Ga0055539_1000090 3300003752 Bacteria 112260
8 Ga0055533_1000001 3300003756 Bacteria 1863437
9 Ga0055525_1000126 3300003759 Bacteria 115430
10 Ga0055542_1000023 3300003762 Bacteria 292964
11 Ga0055529_1000050 3300003763 Bacteria 206297
12 Ga0055528_1008475 3300003790 Bacteria 4402
13 Ga0055540_1000644 3300003792 Bacteria 24654
14 Ga0055531_10037806 3300003794 Bacteria 1461
15 Ga0058692_1006698 3300003856 Bacteria 3134
16 Ga0055543_1007075 3300004625 Bacteria 2633
17 Ga0065165_1000076 3300005262 Bacteria 163890
18 Ga0070669_100103094 3300005353 Bacteria 2155
19 Ga0070698_100586981 3300005471 Bacteria 1054
20 Ga0070665_100004293 3300005548 Bacteria 14980
21 Ga0075364_10042334 3300006051 Bacteria 2958
22 Ga0075364_10045983 3300006051 Bacteria 2841
23 Ga0075362_10067174 3300006177 Bacteria 1631
24 Ga0075367_10026398 3300006178 Bacteria 3294
25 Ga0075367_10038466 3300006178 Bacteria 2785
26 Ga0075367_10070205 3300006178 Bacteria 2105
27 Ga0075367_10172288 3300006178 Bacteria 1348
28 Ga0075370_10051649 3300006353 Bacteria 2332
29 Ga0075370_10114112 3300006353 Bacteria 1570
30 Ga0099826_10027070 3300006948 Bacteria 4218
31 Ga0099826_10053946 3300006948 Bacteria 2671
32 Ga0105251_10015085 3300009011 Bacteria 4238
33 Ga0157373_10245152 3300013100 Bacteria 1267
34 Ga0157371_10000304 3300013102 Bacteria 64521
35 Ga0157371_10022943 3300013102 Bacteria 4564
36 Ga0157370_10000969 3300013104 Bacteria 36344
37 Ga0157369_10022695 3300013105 Bacteria 6999
38 Ga0206354_10426408 3300020081 Bacteria 4480
39 Ga0214542_1001855 3300021321 Bacteria 43676
40 Ga0214542_1021844 3300021321 Bacteria 4260
41 Ga0214543_1000005 3300021327 Bacteria 454523
42 Ga0214543_1000016 3300021327 Bacteria 295257
43 Ga0213876_10016992 3300021384 Bacteria 3844
44 Ga0209566_100066 3300025225 Bacteria 186951
45 Ga0209674_100001 3300025226 Bacteria 4013750
46 Ga0209672_100116 3300025228 Bacteria 87706
47 Ga0209147_104065 3300025229 Bacteria 2558
48 Ga0209563_100001 3300025230 Bacteria 4013775
49 Ga0207427_100054 3300025231 Bacteria 216315
50 Ga0209677_100001 3300025253 Bacteria 4013787
51 Ga0209148_1000240 3300025254 Bacteria 87706
52 Ga0209233_1000001 3300025261 Bacteria 2992747
53 Ga0209455_1000197 3300025272 Bacteria 87706
54 Ga0209455_1000681 3300025272 Bacteria 20165
55 Ga0209673_1001041 3300025273 Bacteria 32420
56 Ga0209676_1040384 3300025292 Bacteria 1314
57 Ga0209025_1000086 3300025294 Bacteria 262586
58 Ga0209025_1002687 3300025294 Bacteria 18144
59 Ga0209758_1088977 3300025297 Bacteria 910
60 Ga0209050_1007899 3300025298 Bacteria 5832
61 Ga0209051_1000142 3300025303 Bacteria 135337
62 Ga0209257_1004127 3300025304 Bacteria 11582
63 Ga0207655_1003327 3300025728 Bacteria 12037
64 Ga0207713_1047588 3300025735 Bacteria 1734
65 Ga0207639_10111556 3300026041 Bacteria 2230
66 Ga0209371_1000035 3300027312 Bacteria 368979
67 Ga0209371_1000703 3300027312 Bacteria 28337
68 Ga0209282_1016097 3300027666 Bacteria 4757
69 Ga0268266_10005622 3300028379 Bacteria 11641
70 Ga0307517_10026818 3300028786 Bacteria 6955
71 Ga0307515_10000375 3300028794 Bacteria 109285
72 Ga0307515_10001750 3300028794 Bacteria 48343
73 Ga0268256_1000037 3300030500 Bacteria 367024
74 Ga0268256_1001969 3300030500 Bacteria 11199
75 Ga0268256_1014039 3300030500 Bacteria 2396
76 Ga0307511_10046053 3300030521 Bacteria 3594
77 Ga0307513_10000335 3300031456 Bacteria 67961
78 Ga0307509_10020109 3300031507 Bacteria 7587
79 Ga0307508_10027066 3300031616 Bacteria 5194
80 Ga0307413_10282648 3300031824 Bacteria 1249
81 Ga0307518_10155019 3300031838 Bacteria 1580
82 Ga0307518_10220054 3300031838 Bacteria 1240
83 Ga0307409_100670770 3300031995 Bacteria 1033
84 Ga0307507_10068347 3300033179 Bacteria 3242
85 Ga0307507_10069137 3300033179 Bacteria 3216
86 Ga0373935_0005203 3300035692 Bacteria 7661
87 Ga0373947_0000002 3300035725 Bacteria 383924
88 Ga0395899_0021959 3300037312 Bacteria 4840
89 Ga0395900_0264264 3300037418 Bacteria 1717
90 Ga0436364_0127308 3300037853 Bacteria 15139
91 Ga0436365_0060428 3300039437 Bacteria 4694
92 Ga0439465_0003665 3300041413 Bacteria 5008
93 Ga0439465_0019038 3300041413 Bacteria 2146
94 Ga0439448_0006682 3300042005 Bacteria 3324
95 Ga0439455_0006630 3300042012 Bacteria 2413
96 Ga0450894_000137 3300042131 Bacteria 12853
97 Ga0450898_001667 3300042134 Bacteria 2982
98 Ga0450903_000157 3300042138 Bacteria 14910
99 Ga0439458_0000372 3300042157 Bacteria 11313
100 Ga0450908_003420 3300042184 Bacteria 3081
101 Ga0466972_0052061 3300044658 Bacteria 1974
102 Ga0466966_0025020 3300044684 Bacteria 3902
103 Ga0466966_0079577 3300044684 Bacteria 2042
104 Ga0466961_0042613 3300044693 Bacteria 2909
105 Ga0466961_0160934 3300044693 Bacteria 1399
106 Ga0466964_0148678 3300044706 Bacteria 1084
107 Ga0466971_0040332 3300044719 Bacteria 2097
108 Ga0466968_0036096 3300044735 Bacteria 2070
109 Ga0466970_0002959 3300044765 Bacteria 8236
110 Ga0466957_0200267 3300044842 Bacteria 1311
111 Ga0466960_0064911 3300044901 Bacteria 1801
112 Ga0466959_0006693 3300045049 Bacteria 8015
113 Ga0466959_0007266 3300045049 Bacteria 7759
114 Ga0466959_0246598 3300045049 Bacteria 1232
115 Ga0466958_0073180 3300045836 Bacteria 2099
116 Ga0466958_0420358 3300045836 Bacteria 864
117 Ga0466967_0175138 3300045976 Bacteria 2021
118 Ga0495627_063015 3300046453 Bacteria 1094
119 Ga0495629_0005762 3300046459 Bacteria 9247
120 Ga0495651_0024492 3300046462 Bacteria 4695
121 Ga0495607_0001551 3300046501 Bacteria 20124
122 Ga0495583_0002018 3300046506 Bacteria 18499
123 Ga0495610_0001068 3300046512 Bacteria 25139
124 Ga0495610_0086900 3300046512 Bacteria 1423
125 Ga0495628_0038069 3300046516 Bacteria 3852
126 Ga0495652_0052362 3300046529 Bacteria 3482
127 Ga0495654_0000753 3300046530 Bacteria 25062
128 Ga0495633_0010738 3300046558 Bacteria 4982
129 Ga0495633_0033729 3300046558 Bacteria 2467
130 Ga0495625_0008393 3300046660 Bacteria 8819
131 Ga0495588_0000981 3300046674 Bacteria 12502
132 Ga0495588_0002201 3300046674 Bacteria 8346
133 Ga0495657_0013235 3300046675 Bacteria 6093
134 Ga0495623_0140251 3300046679 Bacteria 1439
135 Ga0495658_0006034 3300046683 Bacteria 5950
136 Ga0495613_0153561 3300046689 Bacteria 1640
137 Ga0495671_0033213 3300046692 Bacteria 2630
138 Ga0495589_0011972 3300046794 Bacteria 4497
139 Ga0495600_0053534 3300046809 Bacteria 2636
140 Ga0495660_0107774 3300046810 Bacteria 1425
141 Ga0495604_0070549 3300047317 Bacteria 2645
142 Ga0495672_0028409 3300047320 Bacteria 3540
143 Ga0495680_0023598 3300047322 Bacteria 5112
144 Ga0495681_0001911 3300047470 Bacteria 15275
145 Ga0495681_0003172 3300047470 Bacteria 11490
146 Ga0495684_0195639 3300047471 Bacteria 1493
147 Ga0495686_0100415 3300047472 Bacteria 1746
148 Ga0495614_0015690 3300048089 Bacteria 3300
149 Ga0496110_0070319 3300048913 Bacteria 3101
150 Ga0496116_0000135 3300048919 Bacteria 153165
151 Ga0496116_0100836 3300048919 Bacteria 1725
152 Ga0496117_0000052 3300048920 Bacteria 280463
153 Ga0496117_0004915 3300048920 Bacteria 14357
154 Ga0496117_0026604 3300048920 Bacteria 4525
155 Ga0496117_0126722 3300048920 Bacteria 1556
156 Ga0496118_0002941 3300048921 Bacteria 22131
157 Ga0496118_0010022 3300048921 Bacteria 9447
158 Ga0496118_0030633 3300048921 Bacteria 4484
159 Ga0496119_0007851 3300048922 Bacteria 9507
160 Ga0496119_0198862 3300048922 Bacteria 1039
161 Ga0496119_0200907 3300048922 Bacteria 1032
162 Ga0496120_0000019 3300048923 Bacteria 260115
163 Ga0496121_0185092 3300048924 Bacteria 1499
164 Ga0496122_0000032 3300048925 Bacteria 327099
165 Ga0496122_0000053 3300048925 Bacteria 260120
166 Ga0496122_0000195 3300048925 Bacteria 138274
167 Ga0496122_0011906 3300048925 Bacteria 8736
168 Ga0496123_0000038 3300048926 Bacteria 260120
169 Ga0496123_0000093 3300048926 Bacteria 179205
170 Ga0496123_0000153 3300048926 Bacteria 140053
171 Ga0496123_0243023 3300048926 Bacteria 893
172 Ga0496124_0001325 3300048927 Bacteria 37278
173 Ga0496124_0031726 3300048927 Bacteria 4675
174 Ga0496125_0000041 3300048928 Bacteria 310158
175 Ga0496125_0023621 3300048928 Bacteria 5670
176 Ga0496125_0167518 3300048928 Bacteria 1482
177 Ga0496125_0170196 3300048928 Bacteria 1465
178 Ga0496126_0000129 3300048929 Bacteria 174059
179 Ga0496126_0000335 3300048929 Bacteria 99038
180 Ga0496126_0007718 3300048929 Bacteria 11741
181 Ga0501031_0000596 3300049568 Bacteria 21253
182 Ga0501032_0007289 3300049569 Bacteria 8095
183 Ga0501032_0051508 3300049569 Bacteria 2776
184 Ga0501033_0000419 3300049570 Bacteria 40636
185 Ga0501034_0003640 3300049571 Bacteria 17457
186 Ga0501034_0118172 3300049571 Bacteria 2639
187 Ga0501034_0480408 3300049571 Bacteria 1158
188 Ga0501036_0000135 3300049572 Bacteria 47614
189 Ga0501037_0000625 3300049573 Bacteria 27416
190 Ga0501037_0003408 3300049573 Bacteria 11560
191 Ga0501037_0623705 3300049573 Bacteria 722
192 Ga0501038_0004790 3300049574 Bacteria 12574
193 Ga0501038_0015743 3300049574 Bacteria 6872
194 Ga0501038_0404143 3300049574 Bacteria 1056
195 Ga0501039_0462321 3300049575 Bacteria 996
196 Ga0501043_0001098 3300049579 Bacteria 23790
197 Ga0501043_0129018 3300049579 Bacteria 1982
198 Ga0501046_0000528 3300049580 Bacteria 37843
199 Ga0501047_0001998 3300049581 Bacteria 19553
200 Ga0501047_0065372 3300049581 Bacteria 3506
201 Ga0501048_0017933 3300049582 Bacteria 5209
202 Ga0501069_0268231 3300049585 Bacteria 997
203 Ga0501035_0003451 3300049822 Bacteria 15128
204 Ga0501044_0003838 3300049823 Bacteria 16860
205 Ga0501045_0221819 3300049824 Bacteria 1408
206 nmdc:mga03683_34320_c2 3300050489 Bacteria 1297
207 nmdc:mga03n38_5557_c1 3300050490 Bacteria 4302
208 nmdc:mga00v17_11_c1 3300050491 Bacteria 135478
209 nmdc:mga00v17_83734_c1 3300050491 Bacteria 1995
210 nmdc:mga0yw44_528_c1 3300050492 Bacteria 13715
211 nmdc:mga06z11_17598_c1 3300050494 Bacteria 3248
212 nmdc:mga06z11_78862_c1 3300050494 Bacteria 1761
213 nmdc:mga06z11_97141_c1 3300050494 Bacteria 1610
214 nmdc:mga07m45_141920_c1 3300050496 Bacteria 1391
215 nmdc:mga0sz30_35553_c3 3300050516 Bacteria 1241
216 nmdc:mga0sz30_66953_c1 3300050516 Bacteria 1542
217 nmdc:mga0sz30_6754_c1 3300050516 Bacteria 4278
218 Ga0500560_000296 3300053107 Bacteria 6320
219 Ga0500560_000960 3300053107 Bacteria 4594
220 Ga0500560_036721 3300053107 Bacteria 1514
221 Ga0500572_022995 3300053111 Bacteria 1669
222 Ga0500561_0000461 3300053137 Bacteria 6624
223 Ga0500568_0001386 3300053139 Bacteria 15694
224 Ga0500624_000522 3300053157 Bacteria 11066
225 Ga0500624_009938 3300053157 Bacteria 1363
226 Ga0500636_0000009 3300053177 Bacteria 155504
227 Ga0500636_0002661 3300053177 Bacteria 9932
228 Ga0587090_002003 3300059510 Bacteria 2172
229 Ga0587072_003095 3300059643 Bacteria 2307
230 Ga0587071_043917 3300060344 Bacteria 904
231 Ga0466962_0072456 3300061719 Bacteria 1646

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049573 Ga0501037_0623705 Ga0501037_0623705_16_705 228
2 3300048924 Ga0496121_0185092 Ga0496121_0185092_240_1019 231
3 3300049571 Ga0501034_0118172 Ga0501034_0118172_1612_2376 239
4 3300049573 Ga0501037_0000625 Ga0501037_0000625_9616_10380 239
5 3300049579 Ga0501043_0129018 Ga0501043_0129018_1089_1853 239
6 3300021321 Ga0214542_1021844 Ga0214542_10218443 240
7 3300021327 Ga0214543_1000005 Ga0214543_1000005104 240
8 3300046501 Ga0495607_0001551 Ga0495607_0001551_7784_8554 240
9 3300045976 Ga0466967_0175138 Ga0466967_0175138_455_1186 241
10 3300013100 Ga0157373_10245152 Ga0157373_102451522 243
11 3300048913 Ga0496110_0070319 Ga0496110_0070319_494_1252 244
12 3300046512 Ga0495610_0001068 Ga0495610_0001068_24031_24801 245
13 3300046530 Ga0495654_0000753 Ga0495654_0000753_537_1307 245
14 3300044735 Ga0466968_0036096 Ga0466968_0036096_427_1188 248
15 iso_pu_bacteria 2508501122 2509110423 248
16 iso_pu_bacteria 2509276019 2509377379 248
17 iso_pu_bacteria 2510461069 2510841647 248
18 iso_pu_bacteria 2510917022 2511134024 248
19 iso_pu_bacteria 2511231156 2511827103 248
20 iso_pu_bacteria 2513237144 2513912164 248
21 iso_pu_bacteria 2513237146 2513928910 248
22 iso_pu_bacteria 2537561587 2537873090 248
23 iso_pu_bacteria 2554235003 2554245062 248
24 iso_pu_bacteria 2558860100 2558862096 248
25 iso_pu_bacteria 2558860242 2559297107 248
26 iso_pu_bacteria 2558860983 2561467392 248
27 iso_pu_bacteria 2582581283 2585166970 248
28 iso_pu_bacteria 2582581299 2585227985 248
29 iso_pu_bacteria 2582581307 2585276265 248
30 iso_pu_bacteria 2585427531 2585562789 248
31 iso_pu_bacteria 2585427609 2585908660 248
32 iso_pu_bacteria 2585428125 2587984078 248
33 iso_pu_bacteria 2599185156 2599334212 248
34 iso_pu_bacteria 2599185170 2599414927 248
35 iso_pu_bacteria 2599185210 2599604928 248
36 iso_pu_bacteria 2600255279 2601611052 248
37 iso_pu_bacteria 2600255308 2601747825 248
38 iso_pu_bacteria 2643221558 2643813953 248
39 iso_pu_bacteria 2643221568 2643853640 248
40 iso_pu_bacteria 2643221582 2643916730 248
41 iso_pu_bacteria 2643221607 2644049851 248
42 iso_pu_bacteria 2643221636 2644202088 248
43 iso_pu_bacteria 2643221686 2644482763 248
44 iso_pu_bacteria 2643221689 2644497587 248
45 iso_pu_bacteria 2643221693 2644521350 248
46 iso_pu_bacteria 2657244999 2657685662 248
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138 iso_pu_bacteria 2990059506 2990059674 248
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156 iso_pu_bacteria 8056375014 8056376686 248
157 3300037418 Ga0395900_0264264 Ga0395900_0264264_448_1212 249
158 3300049568 Ga0501031_0000596 Ga0501031_0000596_18421_19185 249
159 3300049569 Ga0501032_0007289 Ga0501032_0007289_2037_2801 249
160 3300049570 Ga0501033_0000419 Ga0501033_0000419_13928_14692 249
161 3300049571 Ga0501034_0003640 Ga0501034_0003640_13928_14692 249
162 3300049572 Ga0501036_0000135 Ga0501036_0000135_13906_14670 249
163 3300049573 Ga0501037_0003408 Ga0501037_0003408_3555_4319 249
164 3300049574 Ga0501038_0015743 Ga0501038_0015743_3887_4651 249
165 3300049575 Ga0501039_0462321 Ga0501039_0462321_39_803 249
166 3300049579 Ga0501043_0001098 Ga0501043_0001098_11393_12157 249
167 3300049580 Ga0501046_0000528 Ga0501046_0000528_2059_2823 249
168 3300049581 Ga0501047_0001998 Ga0501047_0001998_13928_14692 249
169 3300049822 Ga0501035_0003451 Ga0501035_0003451_2227_2991 249
170 3300049823 Ga0501044_0003838 Ga0501044_0003838_2108_2872 249
171 iso_pu_bacteria 2643221681 2644455241 249
172 iso_pu_bacteria 2791355260 2793323441 249
173 iso_pu_bacteria 2884763398 2884766439 249
174 iso_pu_bacteria 2919055335 2919055392 249
175 iso_pu_bacteria 2919523602 2919525469 249
176 iso_pu_bacteria 2928153084 2928153551 249
177 3300028786 Ga0307517_10026818 Ga0307517_100268183 250
178 3300028794 Ga0307515_10001750 Ga0307515_1000175026 250
179 3300031507 Ga0307509_10020109 Ga0307509_100201093 250
180 3300031616 Ga0307508_10027066 Ga0307508_100270664 250
181 3300031838 Ga0307518_10155019 Ga0307518_101550192 250
182 3300031838 Ga0307518_10220054 Ga0307518_102200542 250
183 3300033179 Ga0307507_10068347 Ga0307507_100683472 250
184 3300033179 Ga0307507_10069137 Ga0307507_100691371 250
185 iso_pu_bacteria 2873151551 2873157767 250
186 3300004625 Ga0055543_1007075 Ga0055543_10070752 251
187 3300005262 Ga0065165_1000076 Ga0065165_100007691 251
188 3300044684 Ga0466966_0025020 Ga0466966_0025020_1473_2234 251
189 3300044693 Ga0466961_0042613 Ga0466961_0042613_127_888 251
190 3300044719 Ga0466971_0040332 Ga0466971_0040332_549_1310 251
191 3300045049 Ga0466959_0007266 Ga0466959_0007266_4310_5071 251
192 3300045836 Ga0466958_0073180 Ga0466958_0073180_776_1537 251
193 3300046459 Ga0495629_0005762 Ga0495629_0005762_2366_3121 251
194 3300046660 Ga0495625_0008393 Ga0495625_0008393_7038_7793 251
195 3300046674 Ga0495588_0002201 Ga0495588_0002201_2213_2968 251
196 3300046683 Ga0495658_0006034 Ga0495658_0006034_1916_2671 251
197 3300047470 Ga0495681_0003172 Ga0495681_0003172_3256_4011 251
198 3300053107 Ga0500560_000960 Ga0500560_000960_2277_3032 251
199 iso_pu_bacteria 2643221678 2644443597 251
200 iso_pu_bacteria 2919468124 2919472285 251
201 3300002737 JGI25162J39368_1001988 JGI25162J39368_10019884 252
202 3300003790 Ga0055528_1008475 Ga0055528_10084753 252
203 3300003792 Ga0055540_1000644 Ga0055540_10006448 252
204 3300003794 Ga0055531_10037806 Ga0055531_100378062 252
205 3300003856 Ga0058692_1006698 Ga0058692_10066982 252
206 3300005353 Ga0070669_100103094 Ga0070669_1001030942 252
207 3300005548 Ga0070665_100004293 Ga0070665_1000042935 252
208 3300006051 Ga0075364_10042334 Ga0075364_100423342 252
209 3300006051 Ga0075364_10045983 Ga0075364_100459832 252
210 3300006177 Ga0075362_10067174 Ga0075362_100671742 252
211 3300006178 Ga0075367_10026398 Ga0075367_100263983 252
212 3300006178 Ga0075367_10038466 Ga0075367_100384662 252
213 3300006178 Ga0075367_10070205 Ga0075367_100702052 252
214 3300006178 Ga0075367_10172288 Ga0075367_101722882 252
215 3300006353 Ga0075370_10051649 Ga0075370_100516492 252
216 3300006353 Ga0075370_10114112 Ga0075370_101141123 252
217 3300006948 Ga0099826_10027070 Ga0099826_100270702 252
218 3300006948 Ga0099826_10053946 Ga0099826_100539462 252
219 3300009011 Ga0105251_10015085 Ga0105251_100150852 252
220 3300013102 Ga0157371_10000304 Ga0157371_1000030431 252
221 3300013104 Ga0157370_10000969 Ga0157370_100009695 252
222 3300013105 Ga0157369_10022695 Ga0157369_100226952 252
223 3300021321 Ga0214542_1001855 Ga0214542_100185534 252
224 3300021327 Ga0214543_1000016 Ga0214543_100001687 252
225 3300021384 Ga0213876_10016992 Ga0213876_100169923 252
226 3300025273 Ga0209673_1001041 Ga0209673_100104125 252
227 3300025292 Ga0209676_1040384 Ga0209676_10403842 252
228 3300025294 Ga0209025_1000086 Ga0209025_1000086123 252
229 3300025294 Ga0209025_1002687 Ga0209025_100268710 252
230 3300025297 Ga0209758_1088977 Ga0209758_10889771 252
231 3300025298 Ga0209050_1007899 Ga0209050_10078994 252
232 3300025303 Ga0209051_1000142 Ga0209051_100014241 252
233 3300025304 Ga0209257_1004127 Ga0209257_100412710 252
234 3300025728 Ga0207655_1003327 Ga0207655_10033276 252
235 3300025735 Ga0207713_1047588 Ga0207713_10475882 252
236 3300027312 Ga0209371_1000035 Ga0209371_1000035309 252
237 3300027312 Ga0209371_1000703 Ga0209371_10007039 252
238 3300027666 Ga0209282_1016097 Ga0209282_10160975 252
239 3300028379 Ga0268266_10005622 Ga0268266_100056228 252
240 3300028794 Ga0307515_10000375 Ga0307515_1000037544 252
241 3300030500 Ga0268256_1000037 Ga0268256_1000037308 252
242 3300030500 Ga0268256_1001969 Ga0268256_10019693 252
243 3300030500 Ga0268256_1014039 Ga0268256_10140391 252
244 3300031456 Ga0307513_10000335 Ga0307513_1000033545 252
245 3300031824 Ga0307413_10282648 Ga0307413_102826481 252
246 3300031995 Ga0307409_100670770 Ga0307409_1006707702 252
247 3300037853 Ga0436364_0127308 Ga0436364_0127308_9349_10107 252
248 3300039437 Ga0436365_0060428 Ga0436365_0060428_1459_2217 252
249 3300041413 Ga0439465_0003665 Ga0439465_0003665_292_1056 252
250 3300041413 Ga0439465_0019038 Ga0439465_0019038_995_1759 252
251 3300042005 Ga0439448_0006682 Ga0439448_0006682_2413_3171 252
252 3300042012 Ga0439455_0006630 Ga0439455_0006630_367_1125 252
253 3300042131 Ga0450894_000137 Ga0450894_000137_8728_9486 252
254 3300042134 Ga0450898_001667 Ga0450898_001667_176_934 252
255 3300042138 Ga0450903_000157 Ga0450903_000157_3132_3890 252
256 3300042157 Ga0439458_0000372 Ga0439458_0000372_2602_3360 252
257 3300042184 Ga0450908_003420 Ga0450908_003420_1711_2469 252
258 3300045836 Ga0466958_0420358 Ga0466958_0420358_59_817 252
259 3300046453 Ga0495627_063015 Ga0495627_063015_311_1075 252
260 3300046462 Ga0495651_0024492 Ga0495651_0024492_769_1527 252
261 3300046506 Ga0495583_0002018 Ga0495583_0002018_4350_5117 252
262 3300046512 Ga0495610_0086900 Ga0495610_0086900_206_976 252
263 3300046516 Ga0495628_0038069 Ga0495628_0038069_790_1548 252
264 3300046529 Ga0495652_0052362 Ga0495652_0052362_413_1171 252
265 3300046558 Ga0495633_0010738 Ga0495633_0010738_311_1078 252
266 3300046558 Ga0495633_0033729 Ga0495633_0033729_1582_2352 252
267 3300046674 Ga0495588_0000981 Ga0495588_0000981_2966_3733 252
268 3300046675 Ga0495657_0013235 Ga0495657_0013235_628_1386 252
269 3300046679 Ga0495623_0140251 Ga0495623_0140251_651_1409 252
270 3300046692 Ga0495671_0033213 Ga0495671_0033213_652_1419 252
271 3300046809 Ga0495600_0053534 Ga0495600_0053534_435_1193 252
272 3300046810 Ga0495660_0107774 Ga0495660_0107774_365_1135 252
273 3300047317 Ga0495604_0070549 Ga0495604_0070549_1116_1874 252
274 3300047320 Ga0495672_0028409 Ga0495672_0028409_2449_3219 252
275 3300047322 Ga0495680_0023598 Ga0495680_0023598_3254_4012 252
276 3300047470 Ga0495681_0001911 Ga0495681_0001911_3641_4408 252
277 3300047471 Ga0495684_0195639 Ga0495684_0195639_442_1200 252
278 3300048089 Ga0495614_0015690 Ga0495614_0015690_1032_1790 252
279 3300048919 Ga0496116_0100836 Ga0496116_0100836_945_1712 252
280 3300048920 Ga0496117_0000052 Ga0496117_0000052_248714_249481 252
281 3300048920 Ga0496117_0004915 Ga0496117_0004915_12953_13720 252
282 3300048920 Ga0496117_0026604 Ga0496117_0026604_1832_2599 252
283 3300048921 Ga0496118_0002941 Ga0496118_0002941_14663_15430 252
284 3300048921 Ga0496118_0010022 Ga0496118_0010022_5829_6596 252
285 3300048921 Ga0496118_0030633 Ga0496118_0030633_2380_3147 252
286 3300048922 Ga0496119_0007851 Ga0496119_0007851_4353_5120 252
287 3300048922 Ga0496119_0198862 Ga0496119_0198862_179_952 252
288 3300048923 Ga0496120_0000019 Ga0496120_0000019_228449_229216 252
289 3300048925 Ga0496122_0000032 Ga0496122_0000032_81707_82474 252
290 3300048925 Ga0496122_0000053 Ga0496122_0000053_228449_229216 252
291 3300048925 Ga0496122_0000195 Ga0496122_0000195_84999_85766 252
292 3300048925 Ga0496122_0011906 Ga0496122_0011906_443_1219 252
293 3300048926 Ga0496123_0000038 Ga0496123_0000038_228449_229216 252
294 3300048926 Ga0496123_0000093 Ga0496123_0000093_163207_163974 252
295 3300048926 Ga0496123_0000153 Ga0496123_0000153_84976_85743 252
296 3300048927 Ga0496124_0031726 Ga0496124_0031726_1435_2202 252
297 3300048928 Ga0496125_0000041 Ga0496125_0000041_128872_129639 252
298 3300048928 Ga0496125_0023621 Ga0496125_0023621_602_1369 252
299 3300048928 Ga0496125_0170196 Ga0496125_0170196_307_1074 252
300 3300048929 Ga0496126_0007718 Ga0496126_0007718_10743_11510 252
301 3300049569 Ga0501032_0051508 Ga0501032_0051508_1416_2177 252
302 3300049571 Ga0501034_0480408 Ga0501034_0480408_32_799 252
303 3300049574 Ga0501038_0004790 Ga0501038_0004790_8666_9424 252
304 3300049574 Ga0501038_0404143 Ga0501038_0404143_61_822 252
305 3300049581 Ga0501047_0065372 Ga0501047_0065372_1302_2060 252
306 3300049582 Ga0501048_0017933 Ga0501048_0017933_4366_5124 252
307 3300049585 Ga0501069_0268231 Ga0501069_0268231_76_834 252
308 3300049824 Ga0501045_0221819 Ga0501045_0221819_11_772 252
309 3300050489 nmdc:mga03683_34320_c2 nmdc:mga03683_34320_c2_465_1232 252
310 3300050490 nmdc:mga03n38_5557_c1 nmdc:mga03n38_5557_c1_1813_2571 252
311 3300050491 nmdc:mga00v17_11_c1 nmdc:mga00v17_11_c1_114372_115139 252
312 3300050491 nmdc:mga00v17_83734_c1 nmdc:mga00v17_83734_c1_1042_1809 252
313 3300050492 nmdc:mga0yw44_528_c1 nmdc:mga0yw44_528_c1_5218_5985 252
314 3300050494 nmdc:mga06z11_17598_c1 nmdc:mga06z11_17598_c1_1222_1989 252
315 3300050494 nmdc:mga06z11_78862_c1 nmdc:mga06z11_78862_c1_527_1291 252
316 3300050494 nmdc:mga06z11_97141_c1 nmdc:mga06z11_97141_c1_73_840 252
317 3300050496 nmdc:mga07m45_141920_c1 nmdc:mga07m45_141920_c1_268_1026 252
318 3300050516 nmdc:mga0sz30_35553_c3 nmdc:mga0sz30_35553_c3_114_881 252
319 3300050516 nmdc:mga0sz30_66953_c1 nmdc:mga0sz30_66953_c1_646_1413 252
320 3300050516 nmdc:mga0sz30_6754_c1 nmdc:mga0sz30_6754_c1_1742_2509 252
321 3300053107 Ga0500560_000296 Ga0500560_000296_634_1401 252
322 3300053111 Ga0500572_022995 Ga0500572_022995_225_992 252
323 3300053137 Ga0500561_0000461 Ga0500561_0000461_3564_4331 252
324 3300053139 Ga0500568_0001386 Ga0500568_0001386_4068_4832 252
325 3300053157 Ga0500624_000522 Ga0500624_000522_5013_5780 252
326 3300053157 Ga0500624_009938 Ga0500624_009938_509_1273 252
327 3300053177 Ga0500636_0000009 Ga0500636_0000009_27190_27957 252
328 3300053177 Ga0500636_0002661 Ga0500636_0002661_4120_4887 252
329 3300059510 Ga0587090_002003 Ga0587090_002003_1358_2125 252
330 3300059643 Ga0587072_003095 Ga0587072_003095_1352_2119 252
331 3300060344 Ga0587071_043917 Ga0587071_043917_86_850 252
332 3300001990 JGI24737J22298_10034029 JGI24737J22298_100340292 253
333 3300003214 JGI25165J46597_1000269 JGI25165J46597_100026954 253
334 3300003322 rootL2_10081674 rootL2_100816743 253
335 3300003578 Ga0006562J51391_1193684 Ga0006562J51391_119368411 253
336 3300003578 Ga0006562J51391_1193685 Ga0006562J51391_11936853 253
337 3300003752 Ga0055539_1000090 Ga0055539_10000909 253
338 3300003756 Ga0055533_1000001 Ga0055533_10000011727 253
339 3300003759 Ga0055525_1000126 Ga0055525_100012610 253
340 3300003762 Ga0055542_1000023 Ga0055542_10000233 253
341 3300003763 Ga0055529_1000050 Ga0055529_10000503 253
342 3300005471 Ga0070698_100586981 Ga0070698_1005869812 253
343 3300013102 Ga0157371_10022943 Ga0157371_100229434 253
344 3300020081 Ga0206354_10426408 Ga0206354_104264085 253
345 3300025225 Ga0209566_100066 Ga0209566_100066100 253
346 3300025226 Ga0209674_100001 Ga0209674_1000011730 253
347 3300025228 Ga0209672_100116 Ga0209672_1001164 253
348 3300025229 Ga0209147_104065 Ga0209147_1040652 253
349 3300025230 Ga0209563_100001 Ga0209563_1000011730 253
350 3300025231 Ga0207427_100054 Ga0207427_100054194 253
351 3300025253 Ga0209677_100001 Ga0209677_1000011730 253
352 3300025254 Ga0209148_1000240 Ga0209148_10002404 253
353 3300025261 Ga0209233_1000001 Ga0209233_10000011071 253
354 3300025272 Ga0209455_1000197 Ga0209455_10001974 253
355 3300025272 Ga0209455_1000681 Ga0209455_100068118 253
356 3300026041 Ga0207639_10111556 Ga0207639_101115562 253
357 3300030521 Ga0307511_10046053 Ga0307511_100460533 253
358 3300035692 Ga0373935_0005203 Ga0373935_0005203_3490_4260 253
359 3300035725 Ga0373947_0000002 Ga0373947_0000002_378636_379406 253
360 3300037312 Ga0395899_0021959 Ga0395899_0021959_3827_4588 253
361 3300044658 Ga0466972_0052061 Ga0466972_0052061_144_905 253
362 3300044684 Ga0466966_0079577 Ga0466966_0079577_721_1482 253
363 3300044693 Ga0466961_0160934 Ga0466961_0160934_488_1345 253
364 3300044706 Ga0466964_0148678 Ga0466964_0148678_43_804 253
365 3300044765 Ga0466970_0002959 Ga0466970_0002959_2288_3049 253
366 3300044842 Ga0466957_0200267 Ga0466957_0200267_50_907 253
367 3300044901 Ga0466960_0064911 Ga0466960_0064911_100_861 253
368 3300045049 Ga0466959_0006693 Ga0466959_0006693_2611_3372 253
369 3300045049 Ga0466959_0246598 Ga0466959_0246598_406_1167 253
370 3300046689 Ga0495613_0153561 Ga0495613_0153561_421_1185 253
371 3300046794 Ga0495589_0011972 Ga0495589_0011972_2335_3126 253
372 3300047472 Ga0495686_0100415 Ga0495686_0100415_383_1144 253
373 3300048919 Ga0496116_0000135 Ga0496116_0000135_68111_68887 253
374 3300048920 Ga0496117_0126722 Ga0496117_0126722_488_1249 253
375 3300048922 Ga0496119_0200907 Ga0496119_0200907_246_1022 253
376 3300048926 Ga0496123_0243023 Ga0496123_0243023_97_858 253
377 3300048927 Ga0496124_0001325 Ga0496124_0001325_11705_12502 253
378 3300048928 Ga0496125_0167518 Ga0496125_0167518_151_948 253
379 3300048929 Ga0496126_0000129 Ga0496126_0000129_13897_14673 253
380 3300048929 Ga0496126_0000335 Ga0496126_0000335_16354_17148 253
381 3300053107 Ga0500560_036721 Ga0500560_036721_10_780 253
382 3300061719 Ga0466962_0072456 Ga0466962_0072456_665_1426 253
383 iso_pu_bacteria 2643221616 2644096359 253
384 iso_pu_bacteria 2862574272 2862583812 253
385 iso_pu_bacteria 2867475112 2867479849 253
386 iso_pu_bacteria 2918501144 2918502425 253

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03746

LamB_YcsF

LamB/YcsF family

5

241

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1v6t-assembly1.cif.gz_A crystal structure of lactam utilization protein from pyrococcus horikoshii ot3 0.9551 4 251
2dfa-assembly1.cif.gz_A crystal structure of lactam utilization protein from thermus thermophilus hb8 0.9449 4 252
2dfa-assembly1.cif.gz_A crystal structure of lactam utilization protein from thermus thermophilus hb8 0.9375 4 252
2xu2-assembly1.cif.gz_A crystal structure of the hypothetical protein pa4511 from pseudomonas aeruginosa 0.9302 5 240
1v6t-assembly1.cif.gz_A crystal structure of lactam utilization protein from pyrococcus horikoshii ot3 0.9291 4 251
ID Description Score Start End Superfamily
1v6tA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.9551 4 251 3.20.20.370
af_Q2FXX2_1_250_3.20.20.370 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.9529 4 252 3.20.20.370
af_Q2FXX2_1_250_3.20.20.370 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.9455 4 252 3.20.20.370
2dfaA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.9449 4 252 3.20.20.370
2dfaA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.9375 4 252 3.20.20.370
ID Description Score Start End GO Terms
AF-A0A3C2BYS2-F1-model_v4 LamB/YcsF family protein 0.9882 110 253 GO:0005975
AF-W4TG99-F1-model_v4 deleted 0.9881 160 253
AF-A0A645IXZ5-F1-model_v4 LamB/YcsF family protein 0.988 159 251 GO:0005975
AF-A0A7K2X3P7-F1-model_v4 LamB/YcsF family protein 0.9865 166 253 GO:0005975
AF-A0A1V3X7X4-F1-model_v4 LamB/YcsF family protein 0.9857 146 253 GO:0005975

Feature Viewer

pLDDT pTM Quality
92.05 0.9 High
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Predicted Structure (AlphaFold2)

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